View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10706_high_15 (Length: 251)
Name: NF10706_high_15
Description: NF10706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10706_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 53175165 - 53175307
Alignment:
| Q |
99 |
caaacaagtcttaatcacctgagttgaagccattggtagcatcaaacaactcttcataagagaaacatttccaagttggtctttgacaagtttcttcttc |
198 |
Q |
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| T |
53175165 |
caaacaagtcttaatcacctgagttgaagccattggtagcatcaaacaactcttcataagagaaacatttccatgttggtttttgacaagtttcttcttc |
53175264 |
T |
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| Q |
199 |
atatggaagaatcttcaagctcttttcattttcttcacctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53175265 |
atatggaagaatcttcaagctcttttcattttcttcacctttg |
53175307 |
T |
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