View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10706_low_30 (Length: 211)

Name: NF10706_low_30
Description: NF10706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10706_low_30
NF10706_low_30
[»] chr1 (4 HSPs)
chr1 (7-199)||(52549024-52549217)
chr1 (135-199)||(34465175-34465239)
chr1 (143-199)||(4677467-4677523)
chr1 (81-126)||(4678136-4678181)
[»] chr2 (13 HSPs)
chr2 (35-126)||(7542725-7542816)
chr2 (46-126)||(11999904-11999984)
chr2 (135-199)||(12244330-12244394)
chr2 (136-199)||(12235910-12235973)
chr2 (41-126)||(12235194-12235279)
chr2 (41-126)||(12258159-12258244)
chr2 (135-192)||(14705574-14705631)
chr2 (43-126)||(16657095-16657178)
chr2 (41-126)||(12244984-12245069)
chr2 (50-126)||(43625924-43626000)
chr2 (46-102)||(14703918-14703974)
chr2 (35-126)||(16661570-16661661)
chr2 (133-199)||(12257841-12257907)
[»] chr4 (3 HSPs)
chr4 (41-126)||(35132951-35133036)
chr4 (52-126)||(9335469-9335543)
chr4 (52-126)||(30775768-30775842)
[»] chr7 (15 HSPs)
chr7 (52-126)||(13333034-13333108)
chr7 (50-126)||(6790026-6790102)
chr7 (52-122)||(8585288-8585358)
chr7 (52-122)||(8629048-8629118)
chr7 (52-126)||(8667935-8668009)
chr7 (52-126)||(10493952-10494026)
chr7 (50-122)||(3147786-3147858)
chr7 (52-117)||(8671217-8671282)
chr7 (143-199)||(8647820-8647876)
chr7 (35-126)||(8654949-8655040)
chr7 (41-126)||(1301969-1302054)
chr7 (135-164)||(8610775-8610804)
chr7 (143-199)||(1302430-1302486)
chr7 (143-199)||(7876761-7876817)
chr7 (50-126)||(17268453-17268529)
[»] chr5 (2 HSPs)
chr5 (50-126)||(28220465-28220541)
chr5 (142-192)||(28221065-28221115)
[»] chr8 (1 HSPs)
chr8 (73-126)||(43745384-43745437)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 3e-96; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 52549217 - 52549024
Alignment:
Q  7 tcttttgaattcgcactaatgtccactccattatcaccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtct 106  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52549217 tcttttgaattcccactaatgtccactccattatcaccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacttct 52549118  T
Q  107 taccaattaacctcttagcacg-accgtattgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52549117 taccaattaacctcttagcacgtaccgtattgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 52549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 34465239 - 34465175
Alignment:
Q  135 ttgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    ||||||||||||||| ||||||||||| || || || | ||||||||||||||||||| ||||||    
T  34465239 ttgttcctgccatactgcaacacatgagtaggttgtgccaaggtctattcccacagcacgtcctt 34465175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 4677523 - 4677467
Alignment:
Q  143 gccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||| ||||||||||||||||| ||||| | ||| ||||||||||||||| ||||||    
T  4677523 gccacacagcaacacatgaataagtagttccaagatctattcccacagcacgtcctt 4677467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 4678181 - 4678136
Alignment:
Q  81 ttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||||||||| ||||||| || || ||||||||||||||||||||    
T  4678181 ttgaacaacagaatcactatacctcctaccaattaacctcttagca 4678136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 7542725 - 7542816
Alignment:
Q  35 cattatcaccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||| ||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7542725 cattgtcacccgcagtcaccttgaatggccataacagtatatcatcttgaacaacaggatcactaaacttcctaccaattaacctcttagca 7542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 11999904 - 11999984
Alignment:
Q  46 gcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||| ||  |||||||||||||||||||    
T  11999904 gcagtgaccttgaatggccataacaatccatcatcttgaacaacaagatcactaaacttccaaccaattaacctcttagca 11999984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 12244394 - 12244330
Alignment:
Q  135 ttgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||| ||||||    
T  12244394 ttgttcctgccatactgcaacacatgaatacgttgtaccaaggtctattcccacggcacgtcctt 12244330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 12235910 - 12235973
Alignment:
Q  136 tgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||    
T  12235910 tgttcctgccatactgcaacacatgaatatgttgtaccaaggtctatccccacagcaagtcctt 12235973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 12235194 - 12235279
Alignment:
Q  41 caccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||| |||| ||||||||||| ||| ||||  | |||||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  12235194 caccagcagcgaccttgaatggccacaacatcacatcatcttgaacaacttgatcactaaacttcctaccaattaacctcttagca 12235279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 12258244 - 12258159
Alignment:
Q  41 caccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||| |||||||| || |||| ||| |||| ||||||||||||||| ||  ||||||||||| || ||||||||||||||||||||    
T  12258244 caccagcagtgactttaaatggccacaacattatatcatcttgaactacttgatcactaaacttcctaccaattaacctcttagca 12258159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 14705574 - 14705631
Alignment:
Q  135 ttgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagca 192  Q
    ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||    
T  14705574 ttgttcctgccatactgcaacacatgagtacgttgtaccaaggtctattcccacagca 14705631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 16657178 - 16657095
Alignment:
Q  43 ccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||| |||||||||||| ||| || |  ||||||| |||||||||||||||||||||| || |||| |||||||| ||||||    
T  16657178 ccggcaatgaccttgaatggccacaagatgatatcattttgaacaacaggatcactaaacttcctaccgattaaccttttagca 16657095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 12245069 - 12244984
Alignment:
Q  41 caccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||| |||||||||||||| | |||||| |||  ||||||  |||||| ||||||||||||| || |||||||||| |||||||||    
T  12245069 caccagcagtgaccttgaacggccataataatgcatcatccagaacaataggatcactaaacttcctaccaattaatctcttagca 12244984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 43625924 - 43626000
Alignment:
Q  50 tgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||| |||||| ||| ||||  ||||||| ||||||||||| |||||||||| || |||| |||||||||||||||    
T  43625924 tgaccctgaatggccacaacatgatatcattttgaacaacagaatcactaaacttcctaccgattaacctcttagca 43626000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 14703918 - 14703974
Alignment:
Q  46 gcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaac 102  Q
    ||||||||||| |||| |||||| | ||||||||||||||||| |||||| ||||||    
T  14703918 gcagtgaccttaaatggccataaaagtatatcatcttgaacaataggatcgctaaac 14703974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 16661661 - 16661570
Alignment:
Q  35 cattatcaccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||| |||| ||| | |||||||| | ||| |||| |||||| | ||||||||| || ||||||||  || ||||||||||||||||||||    
T  16661661 cattaacaccagcaataaccttgaacggccacaacagtatatctttttgaacaacggggtcactaaatttcctaccaattaacctcttagca 16661570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 12257907 - 12257841
Alignment:
Q  133 tattgttcctgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||||||||||||| |||||||| ||||||||||| || | |||||| ||||| |  ||||||||||    
T  12257907 tattgttcctgccaaacagcaacgcatgaatacgttgtgccaaggtcaattcctatcgcaagtcctt 12257841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 35132951 - 35133036
Alignment:
Q  41 caccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||    
T  35132951 caccggcagtgaccttgaatggccatagcagtatatcatcttgaacaataggatcactaaacttcctaccaattaaccttttagca 35133036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 9335543 - 9335469
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||| ||| |||||||||||   |||||||||  ||||||||||| || ||||| |||| |||||||||    
T  9335543 accttgaatggccacaacaatatatctctttgaacaaccagatcactaaacttcctaccagttaatctcttagca 9335469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 30775768 - 30775842
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||| ||| ||||| ||||| | |||||||||||| || |||||  || ||||||||||||| ||||||    
T  30775768 accttgaatggccacaacaaaatatctttttgaacaacagggtcgctaaatttcctaccaattaaccttttagca 30775842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 13333108 - 13333034
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||| ||| |||| |||||||| ||||||||| |||||||||||| || ||||||||||||||||||||    
T  13333108 accttgaatggccacaacattatatcattttgaacaaccggatcactaaacttcctaccaattaacctcttagca 13333034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 6790026 - 6790102
Alignment:
Q  50 tgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||||| ||| ||||  ||||||| ||||||||||| |||||||||| || ||||||||||||||||||||    
T  6790026 tgaccttgaatggccaaaacatcatatcattttgaacaacagaatcactaaacttcctaccaattaacctcttagca 6790102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 8585358 - 8585288
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctctt 122  Q
    |||||||||| ||| |||| |||||||| ||||||||| |||||||||||| || ||||||||||||||||    
T  8585358 accttgaatggccacaacattatatcattttgaacaacgggatcactaaacttcctaccaattaacctctt 8585288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 8629048 - 8629118
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctctt 122  Q
    |||||||||| ||| ||||  ||||| | |||||||||||||||||||||| || ||||||||||||||||    
T  8629048 accttgaatggccagaacatgatatccttttgaacaacaggatcactaaacttcctaccaattaacctctt 8629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 8667935 - 8668009
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||| ||| |||||||||||   ||||||||| || ||||||||| || ||||||||||||||||||||    
T  8667935 accttgaatggccacaacaatatatctctttgaacaacggggtcactaaacttcctaccaattaacctcttagca 8668009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 10494026 - 10493952
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||| ||| |||| |||||| | ||||||||| |||||||||||| || | ||||||||||||||||||    
T  10494026 accttgaatggccacaacattatatcgttttgaacaaccggatcactaaacttcctgccaattaacctcttagca 10493952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 3147786 - 3147858
Alignment:
Q  50 tgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctctt 122  Q
    |||||||||||| ||| ||||  ||||||| ||||||||||| ||||| |||| || ||||||||||||||||    
T  3147786 tgaccttgaatggccacaacatcatatcattttgaacaacagaatcaccaaacttcctaccaattaacctctt 3147858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 8671282 - 8671217
Alignment:
Q  52 accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaac 117  Q
    |||||||||| ||| |||||||||||   ||||||||| |||||||||||| || |||||||||||    
T  8671282 accttgaatggccacaacaatatatctctttgaacaaccggatcactaaacttcctaccaattaac 8671217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 8647820 - 8647876
Alignment:
Q  143 gccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||| ||||||||||| |||||||| || | ||||||||||||||| ||||||||||    
T  8647820 gccacacagcaacacacgaatacgttgttccaaggtctattcccactgcaagtcctt 8647876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 8654949 - 8655040
Alignment:
Q  35 cattatcaccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||| |||| | ||| ||| |||||| ||| ||||  ||||| | |||||||| |||||||||| || || ||||||||||||||||||||    
T  8654949 cattaacaccagaagtaaccatgaatggccacaacatgatatccttttgaacaataggatcactatacttcctaccaattaacctcttagca 8655040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 1301969 - 1302054
Alignment:
Q  41 caccggcagtgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||  |||||||||||| ||| ||||  || || | ||||||||| | |||||||||| || |||||||||| |||||||||    
T  1301969 caccggcgatgaccttgaatggccacaacatcatgtctttttgaacaactgaatcactaaacttcctaccaattaatctcttagca 1302054  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 8610775 - 8610804
Alignment:
Q  135 ttgttcctgccatacagcaacacatgaata 164  Q
    ||||||||||||||||||||||||||||||    
T  8610775 ttgttcctgccatacagcaacacatgaata 8610804  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 1302430 - 1302486
Alignment:
Q  143 gccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||| ||||||||||| ||||| ||||| | |||||||||||| |||||| ||||||    
T  1302430 gccacacagcaacacacgaataagtagttccaaggtctattccaacagcacgtcctt 1302486  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 7876817 - 7876761
Alignment:
Q  143 gccatacagcaacacatgaatacgtagtacaaaggtctattcccacagcaagtcctt 199  Q
    |||| ||||||||||| |||||||| || | ||||||||||||||| ||| ||||||    
T  7876817 gccacacagcaacacaggaatacgttgttccaaggtctattcccaccgcacgtcctt 7876761  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 17268453 - 17268529
Alignment:
Q  50 tgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||||| |||  ||| |||||| | ||| || ||||||||||||||| || |||||||||  |||||||||    
T  17268453 tgaccttgaatggccacgacattatatctttttggaccacaggatcactaaacttcctaccaattagtctcttagca 17268529  T

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Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 28220465 - 28220541
Alignment:
Q  50 tgaccttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    |||||||||||| ||| |||  ||||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
T  28220465 tgaccttgaatggccacaactttatatcatcttgaacaacagagtcactaaacttcctaccaattaacctcttagca 28220541  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 28221065 - 28221115
Alignment:
Q  142 tgccatacagcaacacatgaatacgtagtacaaaggtctattcccacagca 192  Q
    ||||| |||||||||||||||||||| || | ||| |||||||||||||||    
T  28221065 tgccacacagcaacacatgaatacgttgttccaagatctattcccacagca 28221115  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 43745384 - 43745437
Alignment:
Q  73 atatcatcttgaacaacaggatcactaaacgtcttaccaattaacctcttagca 126  Q
    ||||||| ||||||| ||| |||| ||||| || ||||||||||||||||||||    
T  43745384 atatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagca 43745437  T

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