View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10707_low_20 (Length: 357)
Name: NF10707_low_20
Description: NF10707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10707_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 18 - 346
Target Start/End: Original strand, 47729547 - 47729875
Alignment:
| Q |
18 |
aaatggaccctcttgggacaaaaacatcacgcctccttgaagtactgtaattccttgaaagaattgcttctcgaattgaggctcgagcttcggacaaact |
117 |
Q |
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| T |
47729547 |
aaatggaccctcttgggacaaaaacatcacgcctccttgaagtactgtaattccttgaaagaattgcttctcgaattgaggctcgagcttcggacaaact |
47729646 |
T |
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| Q |
118 |
tccttcaactctatccaagctactcataattttctgcatgcaaacaaagatgatgaaatagaaactttggtttgagaaaacagatagataatacaaaact |
217 |
Q |
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| T |
47729647 |
tccttcaactctatccaagctactcataattttctgcatgcaaacaaagatgatgaaatagaaactttggtttgagaaaacagatagataatacaaaact |
47729746 |
T |
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| Q |
218 |
ttgtgctgaaacttttttgttgatcattaataccttaatgctattgttttctttatggtcaaagcttctatatgcagagttataagtcagaaactgatga |
317 |
Q |
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| T |
47729747 |
ttgagctgaaacttttttgttgatcattaataccttaatgctactgttttctttatggtcaaagcttctatatgcagagttataagtcagaaactgatga |
47729846 |
T |
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| Q |
318 |
ggtttaattacttgtgttgcattattcat |
346 |
Q |
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| T |
47729847 |
ggtttaattacttgtgttgcattattcat |
47729875 |
T |
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