View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10707_low_23 (Length: 350)
Name: NF10707_low_23
Description: NF10707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10707_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 11203661 - 11203999
Alignment:
| Q |
1 |
cgagctattttctg-atcgtttgatcgaacggttaagatatggaatgttgaggacagaacttacatgaatactctgtttggccatcaaagtgaagtatta |
99 |
Q |
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| T |
11203661 |
cgagctattttctggatcgtttgatcgaacggttaagatatggaatgttgaggacagaacttacatgaatactctgtttggccatcaaagtgaagtatta |
11203760 |
T |
|
| Q |
100 |
agtattgattgtttacgcaaagaaagggtattatctgctggccgtgatcgtagtatgcagttgtttaaggtaatctcaccaagatgaagtcttaagtata |
199 |
Q |
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| T |
11203761 |
agtattgattgtttacgcaaagaaagggtattatctgctggccgtgatcgtagtatgcagttgtttaaggtaatctcaccaagatgaagtcttaagtata |
11203860 |
T |
|
| Q |
200 |
tggctgcaaaaccatattgtatatgtcggataatttctcccaccattgctctgtttttggaaaattatcaagtgattaattaataggaannnnnnnncct |
299 |
Q |
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| T |
11203861 |
tggctgcaaaaccatattgtatatgtcggataatttctcccaccattgctctgtttttggaaaaatatcaagtgattaattaataggaattttttttcct |
11203960 |
T |
|
| Q |
300 |
gtcatcaaatgctgtttcttgggttatactgatgtccat |
338 |
Q |
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| T |
11203961 |
gtcatcaaatgctgtttcttgggttatactgatttccat |
11203999 |
T |
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