View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10707_low_28 (Length: 330)
Name: NF10707_low_28
Description: NF10707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10707_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 33641602 - 33641905
Alignment:
| Q |
11 |
aagcaaaggccttctatttggactttcaacttttacgcacattaaattctcctttgcagttacaccagtccaagggatagacacattaaatcctatataa |
110 |
Q |
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| T |
33641602 |
aagcaaaggccttctatttggactttcaacttttacgcacattaaattctcctttgcagttacaccagtccaagggatagacacattaaatcctatataa |
33641701 |
T |
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| Q |
111 |
acacccaagtattgtgctacatttgatcaccaacaaatacacacacacaaccactatccaccatttgttgaagctatggtatccttattcaaagcactgt |
210 |
Q |
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| T |
33641702 |
acacccaagtattgtgctacatttgatcaccaacaaatacacacacacaaccactatccaccatttgttgaagctatggtatccttattcaaagcactgt |
33641801 |
T |
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| Q |
211 |
ccatgactccaagaactgaagttaaagaagaatttgaatcatcgaggaaaagaaagtttgaggaaccatttaccgaagaattcttcaaggatcaaacaaa |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33641802 |
ccatgactccaagaactgaagttaaagaagaatttgaatcatcgaggaaaagaaagtttgaggaaccatttaccgaagaattcttcaaggatcaaacaaa |
33641901 |
T |
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| Q |
311 |
ttta |
314 |
Q |
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|||| |
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| T |
33641902 |
ttta |
33641905 |
T |
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