View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10707_low_32 (Length: 317)
Name: NF10707_low_32
Description: NF10707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10707_low_32 |
 | |
|
| [»] scaffold0055 (8 HSPs) |
| | |
|
| [»] scaffold0052 (9 HSPs) |
| | |
|
| [»] scaffold0021 (1 HSPs) |
| | |
|
| [»] scaffold0515 (1 HSPs) |
| | |
|
| [»] scaffold0306 (1 HSPs) |
| | |
|
| [»] scaffold0152 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0055 (Bit Score: 287; Significance: 1e-161; HSPs: 8)
Name: scaffold0055
Description:
Target: scaffold0055; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 41799 - 41513
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41799 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
41700 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41699 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
41600 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41599 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
41513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 66670 - 66384
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66670 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
66571 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66570 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
66471 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66470 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
66384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 69502 - 69216
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69502 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
69403 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69402 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
69303 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69302 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
69216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #4
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Original strand, 71586 - 71872
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
71586 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
71685 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
71686 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
71785 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
71786 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
71872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #5
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 80048 - 79762
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
80048 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
79949 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79948 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
79849 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79848 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
79762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #6
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 51047 - 50761
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51047 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
50948 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50947 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
50848 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
50847 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccatggaagtttgaggcaataacaggtctgtg |
50761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #7
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 23 - 306
Target Start/End: Complemental strand, 32482 - 32199
Alignment:
| Q |
23 |
ggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctttct |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
32482 |
ggcaccaccaggagtggagcctgcggcttaatttgactcaacaaggggaaacttaccaggtccagacatagtaaggattgacagattgagagctctttct |
32383 |
T |
|
| Q |
123 |
tgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagctat |
222 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
32382 |
tgattctatgggtggtggtgcgtggccgttcttagttggtggagcgatttgtctggttaattccgttaatgaacgagacctcagcctgctaaatagctat |
32283 |
T |
|
| Q |
223 |
gtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32282 |
gtggaggtaaccctccacggccagcttcttagaaggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
32199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 257
Target Start/End: Original strand, 4634 - 4871
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4634 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
4733 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4734 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctagttaattccgttaacgaacgagacctcagcctgctaaatagc |
4833 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagg |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4834 |
tatgtggaggtaaccctccacggccagcttcttagagg |
4871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052 (Bit Score: 287; Significance: 1e-161; HSPs: 9)
Name: scaffold0052
Description:
Target: scaffold0052; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 6402 - 6116
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6402 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
6303 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6302 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
6203 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6202 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
6116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 27434 - 27148
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27434 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
27335 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27334 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
27235 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27234 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
27148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Original strand, 35258 - 35544
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35258 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
35357 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35358 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
35457 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35458 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
35544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #4
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 47954 - 47668
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47954 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
47855 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47854 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
47755 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47754 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
47668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 25572 - 25286
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25572 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
25473 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25472 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
25373 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
25372 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccatggaagtttgaggcaataacaggtctgtg |
25286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #6
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 23 - 306
Target Start/End: Original strand, 63583 - 63866
Alignment:
| Q |
23 |
ggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctttct |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
63583 |
ggcaccaccaggagtggagcctgcggcttaatttgactcaacaaggggaaacttaccaggtccagacatagtaaggattgacagattgagagctctttct |
63682 |
T |
|
| Q |
123 |
tgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagctat |
222 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
63683 |
tgattctatgggtggtggtgcgtggccgttcttagttggtggagcgatttgtctggttaattccgttaatgaacgagacctcagcctgctaaatagctat |
63782 |
T |
|
| Q |
223 |
gtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
63783 |
gtggaggtaaccctccacggccagcttcttagaaggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
63866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #7
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 79901 - 79664
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79901 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
79802 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79801 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctagttaattccgttaacgaacgagacctcagcctgctaaatagc |
79702 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagg |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79701 |
tatgtggaggtaaccctccacggccagcttcttagagg |
79664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 30577 - 30690
Alignment:
| Q |
193 |
gaacgagacctcagcctgctaaatagctatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggca |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30577 |
gaacgagacctcagcctgctaaatagctatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccatggaagtttgaggca |
30676 |
T |
|
| Q |
293 |
ataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30677 |
ataacaggtctgtg |
30690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 42351 - 42248
Alignment:
| Q |
203 |
tcagcctgctaaatagctatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42351 |
tcagcctgctaaatagctatgtggaggtaaccctccacggccagctttttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtc |
42252 |
T |
|
| Q |
303 |
tgtg |
306 |
Q |
| |
|
|||| |
|
|
| T |
42251 |
tgtg |
42248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 306
Target Start/End: Complemental strand, 46216 - 45930
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46216 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
46117 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46116 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
46017 |
T |
|
| Q |
220 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46016 |
tatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
45930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 134 - 298
Target Start/End: Complemental strand, 37967529 - 37967365
Alignment:
| Q |
134 |
gtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagctatgtggaggtaac |
233 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
37967529 |
gtggtagtgcatggccgttcttagttggtggagcgatttgtgtggttaattccgttaacgaacgagacctcagcttgctaaataactatgtggaggtaac |
37967430 |
T |
|
| Q |
234 |
cctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataaca |
298 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37967429 |
cctccacagccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataaca |
37967365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 14379964 - 14380058
Alignment:
| Q |
208 |
ctgctaaatagctatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14379964 |
ctgctaaatagctatgtggaggtaaccctccacggccagcttcttagagggactatggccgcttagaccacggaagtttgaggcaataacaggtc |
14380058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 13643826 - 13643630
Alignment:
| Q |
20 |
aagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctt |
119 |
Q |
| |
|
||||||||| ||| ||||||||||| |||| |||||||||||||||| |||||||||| || ||| | || |||||||||||||| ||||||||||||| |
|
|
| T |
13643826 |
aagggcacctccatgagtggagcctacggcgtaatttgactcaacacagggaaacttatcaagtc--ggcacagtaaggattgacaaactgagagctctt |
13643729 |
T |
|
| Q |
120 |
tcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaaatagc |
219 |
Q |
| |
|
|||||||||||| ||||||||||||| || | |||||||||||| |||||||||| | ||| ||||||| ||| |||||||||| || |||||||| |
|
|
| T |
13643728 |
tcttgattctattagtggtggtgcatgattgt--taagttggtggagcaatttgtctggattatttcgttaacaaacaagacctcagcttgttaaatagc |
13643631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0515 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0515
Description:
Target: scaffold0515; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 7550 - 7626
Alignment:
| Q |
230 |
taaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7550 |
taaccctccacggccagcttcttagagggattatggccgcttaggccacggaagtttaaggcaataacaggtctgtg |
7626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 7560 - 7636
Alignment:
| Q |
230 |
taaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7560 |
taaccctccacggccagcttcttagagggattatggccgcttaggccacggaagtttaaggcaataacaggtctgtg |
7636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 25171 - 25247
Alignment:
| Q |
230 |
taaccctccacggccagcttcttagagggactatggccgcttaggccacggaagtttgaggcaataacaggtctgtg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25171 |
taaccctccacggccagcttcttagagggattatggccgcttaggccacggaagtttaaggcaataacaggtctgtg |
25247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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