View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10707_low_50 (Length: 254)
Name: NF10707_low_50
Description: NF10707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10707_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 40254258 - 40254032
Alignment:
| Q |
18 |
aataagtgcagttttgcttagtgtatatgagactaaagaacaaaaatacgttacaattcaaccttgtgttagtttttgtgtgtatcaaatatattttctg |
117 |
Q |
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| T |
40254258 |
aataagtgcagttttgcttagtgtatatgagactaaagaacaaaaatacgttacaattcaaccttgtgttagtttttgtgtgtatcaaatatattttctg |
40254159 |
T |
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| Q |
118 |
ttgcaagaaaacgtaactgcgttgaactggttcctatagattaaccatattgagctttaggtttctgtttgagatattattgttttttctttgtaacaaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40254158 |
ttgcaagaaaacgtaactgcgttgaactggttcctatagattaaccatattgagctttaggtttctgtttgagatattattgttttttctttgtaacaaa |
40254059 |
T |
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| Q |
218 |
cagaaatattctaccttatgacctatg |
244 |
Q |
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|| |||||||||||||||||||||||| |
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| T |
40254058 |
cataaatattctaccttatgacctatg |
40254032 |
T |
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