View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1070_high_1 (Length: 414)

Name: NF1070_high_1
Description: NF1070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1070_high_1
NF1070_high_1
[»] scaffold0433 (2 HSPs)
scaffold0433 (118-325)||(7107-7314)
scaffold0433 (26-82)||(7015-7071)
[»] scaffold0234 (4 HSPs)
scaffold0234 (118-325)||(2321-2528)
scaffold0234 (118-325)||(11212-11419)
scaffold0234 (26-82)||(2564-2620)
scaffold0234 (26-82)||(11455-11511)
[»] chr7 (27 HSPs)
chr7 (118-325)||(29327784-29327991)
chr7 (118-325)||(11536062-11536269)
chr7 (118-325)||(11542980-11543187)
chr7 (120-325)||(18561009-18561214)
chr7 (120-325)||(15148144-15148349)
chr7 (120-325)||(15152445-15152650)
chr7 (120-325)||(12750828-12751033)
chr7 (127-321)||(12738545-12738739)
chr7 (120-325)||(18257842-18258047)
chr7 (127-306)||(13392160-13392338)
chr7 (140-325)||(2364917-2365101)
chr7 (25-82)||(2653275-2653332)
chr7 (25-82)||(12738442-12738499)
chr7 (151-310)||(7396221-7396381)
chr7 (26-82)||(11543223-11543279)
chr7 (26-82)||(11536305-11536361)
chr7 (26-82)||(12750733-12750789)
chr7 (26-82)||(15152350-15152406)
chr7 (127-211)||(39111822-39111905)
chr7 (26-81)||(29327690-29327745)
chr7 (26-82)||(15148049-15148105)
chr7 (192-233)||(3132748-3132789)
chr7 (168-267)||(10234179-10234278)
chr7 (26-81)||(13392030-13392085)
chr7 (26-82)||(18258087-18258143)
chr7 (147-197)||(29982995-29983045)
chr7 (118-150)||(2653207-2653239)
[»] chr5 (20 HSPs)
chr5 (118-325)||(24695466-24695673)
chr5 (118-325)||(18569863-18570070)
chr5 (120-325)||(19714498-19714703)
chr5 (127-325)||(19707218-19707416)
chr5 (127-306)||(27347497-27347675)
chr5 (130-325)||(22547016-22547211)
chr5 (130-303)||(17285754-17285927)
chr5 (118-227)||(39537962-39538071)
chr5 (184-325)||(18807034-18807175)
chr5 (26-82)||(24695709-24695765)
chr5 (130-303)||(17298907-17299080)
chr5 (238-323)||(39538708-39538793)
chr5 (26-82)||(19714742-19714798)
chr5 (127-227)||(31886540-31886640)
chr5 (26-82)||(19707462-19707518)
chr5 (26-82)||(27347722-27347778)
chr5 (144-233)||(33477390-33477479)
chr5 (34-82)||(18570108-18570156)
chr5 (26-81)||(39537870-39537925)
chr5 (168-233)||(11479420-11479486)
[»] chr4 (47 HSPs)
chr4 (118-325)||(19926760-19926967)
chr4 (118-325)||(10621333-10621540)
chr4 (118-325)||(26970463-26970670)
chr4 (118-325)||(55612683-55612890)
chr4 (118-325)||(5707320-5707527)
chr4 (118-325)||(10628412-10628619)
chr4 (118-325)||(26963640-26963847)
chr4 (120-325)||(28393134-28393339)
chr4 (118-325)||(5713948-5714155)
chr4 (118-325)||(868597-868804)
chr4 (120-325)||(18262214-18262419)
chr4 (120-325)||(4426604-4426808)
chr4 (130-325)||(8845215-8845410)
chr4 (130-325)||(8858179-8858374)
chr4 (138-325)||(18269093-18269280)
chr4 (127-325)||(20311300-20311499)
chr4 (118-233)||(12357136-12357251)
chr4 (130-325)||(10677555-10677747)
chr4 (130-325)||(10891195-10891387)
chr4 (127-325)||(5668125-5668324)
chr4 (120-324)||(5616215-5616421)
chr4 (127-325)||(35223579-35223767)
chr4 (144-325)||(21454137-21454319)
chr4 (25-82)||(19927003-19927060)
chr4 (26-82)||(5713856-5713912)
chr4 (26-82)||(26963548-26963604)
chr4 (26-82)||(26970371-26970427)
chr4 (26-82)||(5707228-5707284)
chr4 (26-82)||(10621576-10621632)
chr4 (26-82)||(12357044-12357100)
chr4 (28-82)||(868507-868561)
chr4 (25-82)||(17142372-17142429)
chr4 (26-82)||(10628655-10628711)
chr4 (26-82)||(55612594-55612650)
chr4 (24-82)||(4426847-4426905)
chr4 (26-80)||(28393380-28393434)
chr4 (26-82)||(18268976-18269032)
chr4 (156-317)||(56516094-56516255)
chr4 (167-233)||(39074279-39074346)
chr4 (33-82)||(55992680-55992729)
chr4 (168-227)||(11161913-11161972)
chr4 (256-307)||(39074218-39074269)
chr4 (156-324)||(30040750-30040919)
chr4 (41-82)||(5668371-5668412)
chr4 (34-82)||(8845118-8845166)
chr4 (34-82)||(8858082-8858130)
chr4 (42-82)||(18262136-18262176)
[»] chr1 (26 HSPs)
chr1 (118-325)||(18252030-18252237)
chr1 (118-325)||(27131409-27131616)
chr1 (118-325)||(18532514-18532721)
chr1 (120-325)||(16359035-16359240)
chr1 (120-325)||(27310577-27310782)
chr1 (120-325)||(21171233-21171438)
chr1 (127-325)||(36816633-36816831)
chr1 (118-325)||(3855919-3856126)
chr1 (118-325)||(22657221-22657429)
chr1 (127-325)||(27277557-27277753)
chr1 (152-325)||(12006539-12006712)
chr1 (152-325)||(12014284-12014457)
chr1 (130-325)||(9917918-9918106)
chr1 (25-82)||(18251935-18251992)
chr1 (25-82)||(18532757-18532814)
chr1 (26-82)||(27310821-27310877)
chr1 (26-82)||(16359280-16359336)
chr1 (148-225)||(3403248-3403325)
chr1 (148-225)||(3443494-3443571)
chr1 (26-82)||(21171479-21171535)
chr1 (26-75)||(22657472-22657521)
chr1 (34-75)||(36816885-36816926)
chr1 (26-82)||(3856164-3856220)
chr1 (26-82)||(27131652-27131704)
chr1 (130-193)||(30720625-30720688)
chr1 (26-82)||(27277800-27277856)
[»] chr3 (53 HSPs)
chr3 (118-325)||(6110064-6110271)
chr3 (118-325)||(10572592-10572799)
chr3 (127-325)||(17781118-17781316)
chr3 (120-325)||(16482483-16482688)
chr3 (120-325)||(18522665-18522870)
chr3 (118-325)||(15600884-15601091)
chr3 (118-325)||(15607429-15607636)
chr3 (121-325)||(13211305-13211509)
chr3 (118-325)||(13248607-13248814)
chr3 (127-325)||(19089745-19089943)
chr3 (118-325)||(8490488-8490702)
chr3 (118-325)||(15357586-15357793)
chr3 (127-325)||(10579355-10579553)
chr3 (120-325)||(13516813-13517018)
chr3 (120-325)||(18519980-18520182)
chr3 (120-325)||(17200184-17200389)
chr3 (137-325)||(15342219-15342407)
chr3 (127-325)||(32056900-32057098)
chr3 (127-325)||(1647521-1647723)
chr3 (118-279)||(18640792-18640953)
chr3 (118-310)||(29924971-29925163)
chr3 (118-310)||(29974124-29974316)
chr3 (138-306)||(16200145-16200313)
chr3 (138-306)||(16200451-16200619)
chr3 (127-325)||(24253388-24253587)
chr3 (224-325)||(17136465-17136566)
chr3 (120-181)||(18534758-18534819)
chr3 (26-82)||(6109972-6110028)
chr3 (26-82)||(8490396-8490452)
chr3 (26-82)||(13248515-13248571)
chr3 (26-82)||(13211211-13211267)
chr3 (26-82)||(18640989-18641045)
chr3 (26-75)||(10579604-10579653)
chr3 (26-82)||(17136137-17136193)
chr3 (26-75)||(10572841-10572890)
chr3 (26-82)||(15607672-15607729)
chr3 (26-75)||(17200434-17200483)
chr3 (120-165)||(18510924-18510969)
chr3 (26-82)||(15351237-15351293)
chr3 (26-82)||(15357829-15357885)
chr3 (26-82)||(16482727-16482782)
chr3 (26-82)||(18519885-18519941)
chr3 (25-82)||(1647768-1647825)
chr3 (26-82)||(15601127-15601184)
chr3 (26-82)||(13516719-13516775)
chr3 (26-70)||(17781370-17781414)
chr3 (26-70)||(19089997-19090041)
chr3 (26-82)||(32057144-32057200)
chr3 (26-82)||(18510829-18510885)
chr3 (26-82)||(18522570-18522626)
chr3 (34-82)||(18534671-18534719)
chr3 (26-82)||(29924879-29924935)
chr3 (26-82)||(29974032-29974088)
[»] chr6 (29 HSPs)
chr6 (120-325)||(16566320-16566525)
chr6 (118-325)||(29308890-29309097)
chr6 (118-325)||(29315850-29316057)
chr6 (118-325)||(17691440-17691647)
chr6 (118-325)||(27381252-27381459)
chr6 (118-325)||(27471635-27471842)
chr6 (120-325)||(188977-189182)
chr6 (120-325)||(17684469-17684674)
chr6 (120-325)||(11651725-11651930)
chr6 (120-325)||(25537159-25537364)
chr6 (120-325)||(13359269-13359474)
chr6 (141-325)||(27925772-27925961)
chr6 (137-310)||(8509941-8510115)
chr6 (157-325)||(20553587-20553755)
chr6 (28-82)||(17691683-17691737)
chr6 (26-75)||(27381502-27381551)
chr6 (26-75)||(27471885-27471934)
chr6 (26-82)||(29308798-29308854)
chr6 (26-82)||(29315758-29315814)
chr6 (156-325)||(17850495-17850663)
chr6 (26-82)||(17684712-17684768)
chr6 (26-80)||(11651630-11651684)
chr6 (156-324)||(20736604-20736773)
chr6 (26-82)||(25537405-25537461)
chr6 (127-180)||(31258065-31258118)
chr6 (34-82)||(13359512-13359560)
chr6 (34-82)||(16566563-16566611)
chr6 (24-82)||(189221-189282)
chr6 (156-233)||(28605854-28605931)
[»] scaffold0657 (2 HSPs)
scaffold0657 (118-325)||(993-1200)
scaffold0657 (25-82)||(900-957)
[»] scaffold0390 (4 HSPs)
scaffold0390 (118-325)||(6934-7141)
scaffold0390 (118-325)||(13950-14157)
scaffold0390 (26-82)||(7177-7233)
scaffold0390 (26-82)||(14193-14249)
[»] chr8 (18 HSPs)
chr8 (118-325)||(21940665-21940872)
chr8 (120-325)||(22171491-22171694)
chr8 (120-319)||(28554885-28555084)
chr8 (127-325)||(6094132-6094330)
chr8 (127-325)||(24642658-24642856)
chr8 (127-251)||(24636863-24636987)
chr8 (130-322)||(38232380-38232570)
chr8 (148-309)||(32872857-32873019)
chr8 (25-82)||(22070107-22070164)
chr8 (26-82)||(21940573-21940629)
chr8 (26-75)||(24642556-24642605)
chr8 (26-82)||(6094031-6094087)
chr8 (26-82)||(22171396-22171452)
chr8 (26-82)||(28554791-28554847)
chr8 (139-322)||(2375027-2375208)
chr8 (156-219)||(10920234-10920297)
chr8 (240-325)||(14983920-14984004)
chr8 (26-63)||(24636605-24636642)
[»] chr2 (13 HSPs)
chr2 (118-325)||(21330248-21330455)
chr2 (137-325)||(18796525-18796713)
chr2 (127-325)||(18619814-18620011)
chr2 (127-263)||(19692598-19692734)
chr2 (182-310)||(20977956-20978084)
chr2 (152-325)||(36270199-36270373)
chr2 (25-82)||(21330493-21330550)
chr2 (152-325)||(18822115-18822290)
chr2 (238-325)||(18852059-18852146)
chr2 (255-325)||(22183483-22183553)
chr2 (289-325)||(12098618-12098654)
chr2 (26-82)||(19692773-19692829)
chr2 (154-309)||(36802664-36802820)
[»] scaffold0220 (2 HSPs)
scaffold0220 (118-325)||(18288-18495)
scaffold0220 (26-82)||(18196-18252)
[»] scaffold0186 (2 HSPs)
scaffold0186 (118-325)||(25990-26197)
scaffold0186 (26-81)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (120-325)||(5531-5736)
scaffold0063 (34-82)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (120-301)||(230365-230545)
scaffold0008 (26-82)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (118-181)||(8447-8510)
scaffold0176 (26-82)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (26-82)||(23769-23825)
[»] scaffold0326 (1 HSPs)
scaffold0326 (26-74)||(16523-16571)
[»] scaffold0705 (1 HSPs)
scaffold0705 (26-82)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (26-82)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (21-62)||(1-42)
[»] scaffold0565 (2 HSPs)
scaffold0565 (28-82)||(10202-10256)
scaffold0565 (137-168)||(10127-10158)
[»] scaffold0170 (1 HSPs)
scaffold0170 (26-75)||(5878-5927)
[»] scaffold0032 (1 HSPs)
scaffold0032 (147-219)||(92194-92267)


Alignment Details
Target: scaffold0433 (Bit Score: 188; Significance: 1e-102; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 188; Significance: 1e-102; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  320 gatgat 325  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  320 gatgat 325  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  320 gatgat 325  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | | |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  320 gatgat 325  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 127 - 321
Target Start/End: Original strand, 12738545 - 12738739
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||   |||    
T  12738545 ttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttgtta 12738644  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 321  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738645 aacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||||| || || | |||||| |||||||| ||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  320 gatgat 325  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 306
Target Start/End: Original strand, 13392160 - 13392338
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||||| | ||||||| |||||| |||||||    
T  13392160 ttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-cccatta 13392258  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    ||   || || | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392259 aatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 325
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  140 ttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaac 239  Q
    ||||| |||||||||||||||||||| |||||||| ||||||| | |||||||||||||||| |  |||||| |||||| ||||||||||  ||||| |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  240 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||| ||| |||  |||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 12738442 - 12738499
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12738442 atgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 310
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  151 caaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 249  Q
    |||||||| || ||| ||||||||||||||   ||||| ||||||||||||||| |||||||  |||||||| |||||||||||  ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  250 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
      || ||||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 39111822 - 39111905
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaat 211  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||  |||| |||||||| |||||||||||  |||||||    
T  39111822 ttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 3132748 - 3132789
Alignment:
Q  192 aacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataa 3132789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 10234179 - 10234278
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctt 267  Q
    |||||||||||||| |||||||| | |||||| |||||||||||  |||||  ||||||||||||| || |||| | | ||| ||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataaagacactaatattaaaataaatgtagtcaagctt 10234278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 29982995 - 29983045
Alignment:
Q  147 gtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 197  Q
    |||||||| ||||||||||  ||||| ||||| ||||||||||||||||||    
T  29982995 gtttcaaagtaataaagtctttagaacagttaatctgtttaatggaacatt 29983045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  118 acaaggcaattctttattgattttgttttgttt 150  Q
    |||||||| ||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  320 gatgat 325  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 19707416 - 19707218
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19707416 ttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccgtta 19707317  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19707316 aacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatgat 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 306
Target Start/End: Complemental strand, 27347675 - 27347497
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| | ||||||| |||||| |||||||    
T  27347675 ttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-cccatta 27347577  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    |||  || || | |||||| ||||||| |||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347576 aacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 22547211 - 22547016
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||     
T  22547211 tttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctcattaaat 22547112  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||  || | |||| | |||||||  | |||||| |||||||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||||    
T  22547111 atatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatgat 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 130 - 303
Target Start/End: Complemental strand, 17285927 - 17285754
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||| | ||||||| |||| |||| | |||||    
T  17285927 tttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccctagtaaac 17285828  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 303  Q
      ||||| | |||||| |||||||   ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285827 taaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||| ||||||||||||||||||||||  | |||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  218 accccattaa 227  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  184 tttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatctgtagtcaagctttattgagaagtggga 282  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||||| | | |||||| ||||||||| ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  283 tatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 303
Target Start/End: Complemental strand, 17299080 - 17298907
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    ||||||||||||||| |||||  |||||||||  |||  ||||||||||||| | |||||||||||||||||   ||||||| |||| |||| | |||||    
T  17299080 tttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccctagtaaac 17298981  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 303  Q
      ||||| | |||||| |||||||   ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298980 taaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 39538708 - 39538793
Alignment:
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 323  Q
    |||||||| ||| ||||  |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538708 actattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 31886540 - 31886640
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||   |||||| |||||| |||||  ||||||| ||||||| ||||||    
T  31886540 ttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactccatta 31886639  T
Q  227 a 227  Q
    |    
T  31886640 a 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 33477479 - 33477390
Alignment:
Q  144 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||||| | |  |||| |||||||| |||||| |||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataa 33477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||||||||||||| |||| || |||| |||||| |||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 11479420 - 11479486
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataa 233  Q
    ||||||| ||||| ||||||||| || ||||||| | |||| |||||||||||| ||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataa 11479486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  320 gatgat 325  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  320 gatgat 325  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataa-ggaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  320 gatgat 325  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 138 - 325
Target Start/End: Original strand, 18269093 - 18269280
Alignment:
Q  138 ttttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa 237  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  18269093 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 18269192  T
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269193 actattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 20311300 - 20311499
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaag-tataacttaattgtgagaccccatt 225  Q
    |||||||||||||||||||||||| ||||||||||||| | || |||||||| | |||| |||||| ||||||| |||||||||||||||||||||||||    
T  20311300 ttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccatt 20311399  T
Q  226 aaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||||| || ||| || | ||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||    
T  20311400 aaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatgat 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  218 accccattaaacataa 233  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 10677747 - 10677555
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10677747 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10677649  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
      ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10677648 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10677555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 10891387 - 10891195
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10891387 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10891289  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
      ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10891288 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 5668324 - 5668125
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||| | | ||||| |||||| |||||||    
T  5668324 ttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-cccatta 5668226  T
Q  227 aacataatgaaactattctaaaag--tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 324  Q
    ||   || || | |||||| ||||  ||| |||||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| | ||||| |||||    
T  5668225 aatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccgatga 5668126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 120 - 324
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||| |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||| ||||||   | || | |||||| |||||||| || |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  318 ctgatga 324  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 35223579 - 35223767
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||          | | |    
T  35223579 ttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cgtaa 35223668  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||  || || | |||||| |||||||  |||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  35223669 aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatgat 35223767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  144 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataatgaaactat 242  Q
    ||||||||||| ||||||||| | ||||||||||||| || ||||||||||||| || | | |||||||  ||||||||||||||  ||||||| | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  243 tctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    | | ||| ||||| ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 19927060 - 19927003
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19927060 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17142429 - 17142372
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17142429 atgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 4426905 - 4426847
Alignment:
Q  24 aatgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||    
T  4426905 aatgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 317
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatc 254  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  255 tgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 39074346 - 39074279
Alignment:
Q  167 ctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||| |||||| |||||| | ||||||||||||| |||||||  ||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataa 39074279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  33 ataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaa 227  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 39074269 - 39074218
Alignment:
Q  256 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 307  Q
    |||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074269 gtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 324
Target Start/End: Complemental strand, 30040919 - 30040750
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaa-gtat 253  Q
    ||||||||| |||||||||| ||||  || |||| | | ||||||| | |||||||  |||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  254 ctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 324  Q
    || ||||||||| ||| |  ||| |||||||  | |||||||| ||||||||||||||  |||||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatga 30040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  41 taatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  42 aatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||| |  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  320 gatgat 325  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | | || ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  320 gatgat 325  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| || ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  320 gatgat 325  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 36816831 - 36816633
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || |||    
T  36816831 ttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccgtta 36816732  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| || | |||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  36816731 aacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatgat 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||| || |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| || | |||||| ||| ||| ||||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  118 acaaggcaattctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtga 216  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  217 gaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    |||||| |||||||||| || || ||||| ||||| ||| |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  317 actgatgat 325  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 27277753 - 27277557
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||  ||||| ||| ||||| || | ||||||| | ||||||   |||    
T  27277753 ttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt-tta 27277656  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    | |  ||||| | |||||| |||||||| ||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  27277655 accgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatgat 27277557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 325
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 251  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| |  |||||| |||||||||||| |||||||| || | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  252 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||  |||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 325
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 251  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| ||||||| ||| ||||| || ||| |||||||||||||||||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  252 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||| ||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||| ||||||||||||||| ||       ||||| |||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| || | |||||| ||| ||||| |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 18532814 - 18532757
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18532814 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 225  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 225  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 22657521 - 22657472
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttg 22657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 36816926 - 36816885
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttg 36816885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||| ||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||| ||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 30720688 - 30720625
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaa 193  Q
    ||||||| |||| |||||||| ||||||||||||| ||| ||||| |||||  |||||||||||    
T  30720688 tttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||| ||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 17781316 - 17781118
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17781316 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 17781217  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781216 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  320 gatgat 325  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  320 gatgat 325  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 121 - 325
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  121 aggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  221 ccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 320  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  321 atgat 325  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 19089943 - 19089745
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19089943 ttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagaccccttta 19089844  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19089843 aacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatgat 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact-------attatgt 310  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  311 aggtagactgatgat 325  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 10579553 - 10579355
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  10579553 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagaccccatta 10579454  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10579453 aacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatgat 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  320 gatgat 325  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| ||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  320 gatgat 325  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  320 gatgat 325  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 137 - 325
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatga 236  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  237 aactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 32057098 - 32056900
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||    
T  32057098 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccgtta 32056999  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32056998 aacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatgat 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 1647723 - 1647521
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataa----cttaattgtgagacccc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  1647723 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagacccc 1647624  T
Q  223 attaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 322  Q
     |||||||||| ||||||||| | |||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | |||||||||    
T  1647623 gttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagactgat 1647524  T
Q  323 gat 325  Q
    |||    
T  1647523 gat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtg 279  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 138 - 306
Target Start/End: Original strand, 16200145 - 16200313
Alignment:
Q  138 ttttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa 237  Q
    |||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  16200145 ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagaccccattaaacataaggac 16200244  T
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    | |||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200245 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 138 - 306
Target Start/End: Original strand, 16200451 - 16200619
Alignment:
Q  138 ttttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa 237  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| ||     
T  16200451 ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagactccaataaacataaggac 16200550  T
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    | |||||| |||||||  ||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200551 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 24253587 - 24253388
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccatt 225  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||| | ||  |||| |||||||||||||||| ||||||| |||||| ||||||     
T  24253587 ttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatccccatc 24253488  T
Q  226 aaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||||| || |||||||| ||||||| ||| |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||| |||||    
T  24253487 aaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatgat 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 323  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  324 at 325  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 18534758 - 18534819
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 181  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtc 18534819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10579653 - 10579604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttg 10579604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10572890 - 10572841
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttg 10572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17200483 - 17200434
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttg 17200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtc 165  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 3e-98; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  320 gatgat 325  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  320 gatgat 325  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  320 gatgat 325  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  320 gatgat 325  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  320 gatgat 325  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
     |||||||||||||  | | |||| | |||||||| |||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  320 gatgat 325  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 325
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  141 tgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataatg 235  Q
    |||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  ||      
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  236 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||| |||||| ||||||||| ||||||| |||||||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 310
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataatg 235  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||| |||  |||||||| ||||| |||||||||| || | |    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  236 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    |   |||| | ||||||| |||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 325
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  157 aataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctg 256  Q
    ||||||||| |||| |||| ||||| |||||||| || ||||||||  ||||||| |||||| ||||||||| ||||  | | |||||| |||| ||| |    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  257 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27381551 - 27381502
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27471934 - 27471885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatct 255  Q
    |||||||||||||| ||||| |||| |||||  |||||||||| |||  |||||||||||| | || |||||| | || || |||||||| ||| ||||     
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  256 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 324
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaa-gtat 253  Q
    ||||||||| |||||||||| ||||  || |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  254 ctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 324  Q
    |||||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 31258118 - 31258065
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 180  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258118 ttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 189282 - 189221
Alignment:
Q  24 aatgttggaataagccctaatagccaatcta---tattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||  |||||||   ||||||||||||||||||||| ||||||    
T  189282 aatgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 28605854 - 28605931
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||||  |||||||||||| | |||||||||| || |||||| | ||| |||||||||||| | ||||| ||||    
T  28605854 taataaagtatctagaatagttattttgtttaatgggactttaagtgtgactaaattgtgagacctcgttaaagataa 28605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 900 - 957
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 180; Significance: 4e-97; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 4e-97; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  320 gatgat 325  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 6094132 - 6094330
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6094132 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 6094231  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  6094232 aacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatgat 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 24642658 - 24642856
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  24642658 ttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 24642757  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||| ||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  24642758 aacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatgat 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 24636863 - 24636987
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||    
T  24636863 ttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccgtta 24636962  T
Q  227 aacataatgaaactattctaaaagt 251  Q
    ||||||| ||||||||||| |||||    
T  24636963 aacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 322
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 322  Q
     |||  | | |||||| ||||||| ||||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaaa-atagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 309
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgttta-atggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattcta 246  Q
    ||||||||||||||||||| || |||||||  ||  |||| || ||||||||||||| |||||||||||||| | |||| || | | ||| | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  247 aaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 309  Q
    ||| ||| |||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 22070107 - 22070164
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22070107 atgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 24642556 - 24642605
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttg 24642605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 2375027 - 2375208
Alignment:
Q  139 tttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaa 238  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | |||||||||||||   | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  239 ctattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 322  Q
     |||| | ||||||| |||||||| | ||||||| | |||| |||| |||||||| |||   ||||||| || |||||| ||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaagtatatgaactattaagtgggtagattgat 2375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 14984004 - 14983920
Alignment:
Q  240 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||| ||||||||| || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| |||||||| |||||    
T  14984004 tattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtgggtagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattg 63  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 137 - 325
Target Start/End: Original strand, 18796525 - 18796713
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatga 236  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||| ||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  237 aactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
     | |||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagactgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 18619814 - 18620011
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||| ||||| |||||||    
T  18619814 ttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccatta 18619912  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| || || | |||||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  18619913 aacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggccgatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 263
Target Start/End: Complemental strand, 19692734 - 19692598
Alignment:
Q  127 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatta 226  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | |||||||  ||||| | |||||    
T  19692734 ttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctcatta 19692635  T
Q  227 aacataatgaaactattctaaaagtatctgtagtcaa 263  Q
    |||  || |||| |||||| ||||||||  |||||||    
T  19692634 aactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 20977956 - 20978084
Alignment:
Q  182 tgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtggg 281  Q
    ||||||||||||||||||| |||| |||||  ||||| ||||||||| |||| |||| |||||| |||  ||| |||||||||||||| || |||||| |    
T  20977956 tgtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgag 20978055  T
Q  282 atatcattaaagcatagagactattatgt 310  Q
    |||||| ||||||||||||||||||||||    
T  20978056 atatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 325
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaag 250  Q
    ||||||||||||||||||||||||||||| |  |||| || ||  |||||| | ||||||| |||||||  ||||||||| ||||| |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  251 tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
     ||| ||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21330550 - 21330493
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21330550 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 325
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 249  Q
    ||||||||||||||  |||||| ||||||  |||||| ||||| | |||||| |  |||||| ||||||| |||||||||| || || |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  250 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
      || |||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    |||||||| ||||||| ||||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 22183553 - 22183483
Alignment:
Q  255 tgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 325  Q
    ||||||||||||||| || |||   ||||| |||||||| ||||||||||||| || |||||| |||||||    
T  22183553 tgtagtcaagctttagtgtgaaaatggataacattaaagtatagagactattacgtgggtagattgatgat 22183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 12098654 - 12098618
Alignment:
Q  289 taaagcatagagactattatgtaggtagactgatgat 325  Q
    |||| |||||||||||||||||| |||||||||||||    
T  12098654 taaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||| ||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 309
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  154 aataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagta 252  Q
    ||||||||||||| | ||||||||| |  |||||| ||||| ||||| | | |||||||||  |||   ||||||||| ||||| | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  253 tctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 309  Q
    || ||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  318 ctgatgat 325  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  320 gatgat 325  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  120 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 301  Q
    ||| |||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 8510 - 8447
Alignment:
Q  118 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 181  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 16523 - 16571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 16571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  21 accaatgttggaataagccctaatagccaatctatattgatt 62  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42 accactgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||| ||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 168
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccct 168  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 5878 - 5927
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||| |||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttg 5927  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  147 gtttcaaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagac 219  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

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