View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10710_high_14 (Length: 244)
Name: NF10710_high_14
Description: NF10710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10710_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 39626540 - 39626771
Alignment:
| Q |
1 |
gaaataagcactatacactgccaaggtttgtcgctgagcttttttgcttttaggagcatttaagtgagtacaaaaattatttggaaagataaaagccgta |
100 |
Q |
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| T |
39626540 |
gaaataagcactatacactgccaaggtttgtcgctgagcttttttgcttttaggagcatttaagtgggtacaaaaattatttggaaagataaaagccgta |
39626639 |
T |
|
| Q |
101 |
gcgtatgtaatgggtggacattcacaactagttgttctgtatagattctaagcatgaattcacggagaaaaagtacttattctggttgactatgttaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39626640 |
gcgtatgtaatgggtggacattcacaactagttgttctgtatagattataagcatgaattcacggagaaaaagtacttattctggttgactatgttaaat |
39626739 |
T |
|
| Q |
201 |
gtgacaattatgggttttagatgttctttttg |
232 |
Q |
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||||||| |||||||||||||||||||||||| |
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| T |
39626740 |
gtgacaactatgggttttagatgttctttttg |
39626771 |
T |
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