View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10710_high_17 (Length: 230)
Name: NF10710_high_17
Description: NF10710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10710_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21481473 - 21481378
Alignment:
| Q |
1 |
agcaggaaaatcacagaaaaaccagcatgggaataatgctgcaaatttagctggaactgcagtggataataatggcacgccatcttcaccaaagag |
96 |
Q |
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| T |
21481473 |
agcaggaaaatcacagaaaaaccagcatgggaataatgctgcaaatttagctggaactgcagtggataataatggcacgccatcttcaccaaagag |
21481378 |
T |
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Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 21481298 - 21481249
Alignment:
| Q |
163 |
gtagagtagagtcaataaaagagactttgagctgaacatgcaaggcttat |
212 |
Q |
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| T |
21481298 |
gtagagtagagtcaataaaagagactttgagctgaacatgcaaagcttat |
21481249 |
T |
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