View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10710_low_19 (Length: 289)
Name: NF10710_low_19
Description: NF10710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10710_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 5547105 - 5547365
Alignment:
| Q |
7 |
catattaggggattggagattgtaatttgcaatttatc--atcatatagtattttgaaagcaagctagcaagcagcaagaaaagtatcaagccatgctat |
104 |
Q |
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| T |
5547105 |
catattagggaattggagattgtaatttgcaatttatcctatagtatagtattttgaaagcaagctagcaagcagcaagaaaagtatgatgccatgctat |
5547204 |
T |
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| Q |
105 |
tatctgagctagcactcgacaaggagccaaagaaagcagataacgacaaaagacaaactccgaaaaccacgaaactaacacaaacccgaaattcacacgt |
204 |
Q |
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|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5547205 |
tatctgagctggcactcgacaaggagccaaaggaagcagataacgacaaaagacaaactccgaaaaccacgaaactaacacaaacccgaaattcacacgt |
5547304 |
T |
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| Q |
205 |
gtcattgtcaaacctcaacaagaccattcccactatcaataacatcgccatcacactccac |
265 |
Q |
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| T |
5547305 |
gtcattgtcaaacctcaacaagaccattcccactatcaataacatcgccatcacagtccac |
5547365 |
T |
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