View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10710_low_2 (Length: 437)
Name: NF10710_low_2
Description: NF10710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10710_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 35 - 417
Target Start/End: Original strand, 32776926 - 32777309
Alignment:
| Q |
35 |
aggaggagcagagaaaaacagcatttaagttggtaggataaagtgcatttgttgcaagctttttgatgagaagattggaaatggaatggagtgtggtggg |
134 |
Q |
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| T |
32776926 |
aggacgagcagagaaaaacagcatttaagttggtaggataaagtgcatttgttgcaagctttttgatgagaagattggaaatagaatggagtgtggtggg |
32777025 |
T |
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| Q |
135 |
gaataagggagggacattctggcatccataaatttgacagatggcacatggattgcagaaccaatgatcaatagaagccacacacgnnnnnnnncctatc |
234 |
Q |
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| T |
32777026 |
gaataagggagggacattctggcacccataaatttgacagatggcacatggattgcagaaccaatgatcaatagaagccacacacgaaaaaaaacctatc |
32777125 |
T |
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| Q |
235 |
cagaaaaatgttttaatccatttgtatattcaaattgcaagaagatattttgataatttagacag-nnnnnnntaaaataaacacagcatttaaaaatag |
333 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
32777126 |
cag-aaaatgttttaatccatttgtatattcaaattgcaagaagatattttgataatttagacagaaaaaaaataaaataaacacagcattttaaaaatc |
32777224 |
T |
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| Q |
334 |
attctctatattcaactttggtacagttggttgtaaatcgttagactaggagagatacatttataac--ttaatctaatgatctac |
417 |
Q |
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| T |
32777225 |
agtaac-atttataactttggtacagttggttgtaaatcgttagactaggagagatacatttataacttttaatctaatgatctac |
32777309 |
T |
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