View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10710_low_25 (Length: 263)

Name: NF10710_low_25
Description: NF10710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10710_low_25
NF10710_low_25
[»] chr8 (22 HSPs)
chr8 (151-255)||(34304790-34304894)
chr8 (151-255)||(35181518-35181622)
chr8 (151-255)||(18066712-18066816)
chr8 (149-255)||(33629987-33630093)
chr8 (151-255)||(16603620-16603724)
chr8 (149-237)||(29800962-29801050)
chr8 (148-236)||(30912575-30912663)
chr8 (151-237)||(42197447-42197533)
chr8 (151-255)||(16358827-16358932)
chr8 (203-255)||(10678146-10678198)
chr8 (149-237)||(20148760-20148848)
chr8 (149-237)||(42295195-42295283)
chr8 (149-237)||(26125635-26125723)
chr8 (149-237)||(42699257-42699345)
chr8 (151-237)||(2546998-2547084)
chr8 (151-237)||(11582768-11582854)
chr8 (151-237)||(29705364-29705450)
chr8 (151-237)||(36743495-36743581)
chr8 (151-235)||(1375544-1375628)
chr8 (157-237)||(31384672-31384752)
chr8 (151-237)||(2165975-2166061)
chr8 (151-237)||(5754905-5754991)
[»] chr1 (20 HSPs)
chr1 (1-148)||(51453870-51454000)
chr1 (151-255)||(44112679-44112783)
chr1 (151-255)||(45427739-45427843)
chr1 (151-255)||(41065155-41065259)
chr1 (151-255)||(48119630-48119734)
chr1 (151-255)||(35000107-35000211)
chr1 (151-255)||(35003296-35003400)
chr1 (151-255)||(38113189-38113293)
chr1 (151-255)||(38335920-38336024)
chr1 (151-255)||(45705827-45705931)
chr1 (151-255)||(46168385-46168489)
chr1 (151-255)||(45639726-45639830)
chr1 (151-255)||(26585464-26585568)
chr1 (151-206)||(14427349-14427404)
chr1 (151-237)||(43571098-43571184)
chr1 (151-237)||(48498974-48499060)
chr1 (149-237)||(2497574-2497662)
chr1 (151-237)||(5489778-5489864)
chr1 (149-237)||(4401327-4401416)
chr1 (149-237)||(7447826-7447913)
[»] chr3 (22 HSPs)
chr3 (151-255)||(9434126-9434230)
chr3 (151-255)||(34791831-34791935)
chr3 (151-255)||(51757595-51757699)
chr3 (151-255)||(4190259-4190363)
chr3 (151-255)||(10457886-10457990)
chr3 (151-255)||(25996270-25996374)
chr3 (151-254)||(52627972-52628075)
chr3 (151-237)||(40808867-40808953)
chr3 (148-248)||(27748562-27748662)
chr3 (151-237)||(25413683-25413769)
chr3 (151-237)||(42100690-42100776)
chr3 (151-237)||(45126940-45127026)
chr3 (151-249)||(53273684-53273782)
chr3 (151-237)||(24688414-24688500)
chr3 (151-237)||(42394431-42394517)
chr3 (151-237)||(46941055-46941141)
chr3 (151-237)||(54237098-54237184)
chr3 (191-248)||(51249350-51249407)
chr3 (149-237)||(53581870-53581958)
chr3 (151-237)||(36150132-36150218)
chr3 (151-237)||(40480751-40480837)
chr3 (151-237)||(54246160-54246246)
[»] chr2 (24 HSPs)
chr2 (151-255)||(43114559-43114663)
chr2 (148-255)||(11825648-11825755)
chr2 (140-255)||(41281968-41282083)
chr2 (151-255)||(12415454-12415558)
chr2 (151-255)||(12427514-12427618)
chr2 (151-255)||(16803970-16804074)
chr2 (151-255)||(16843252-16843356)
chr2 (151-255)||(18491707-18491811)
chr2 (149-234)||(6518484-6518568)
chr2 (151-255)||(966828-966932)
chr2 (155-255)||(34895735-34895835)
chr2 (149-255)||(4299414-4299520)
chr2 (173-255)||(4451944-4452026)
chr2 (171-255)||(12531657-12531740)
chr2 (151-248)||(34817777-34817874)
chr2 (151-235)||(43335777-43335861)
chr2 (151-237)||(1750416-1750502)
chr2 (151-237)||(4764738-4764824)
chr2 (151-237)||(19047159-19047245)
chr2 (151-237)||(30838634-30838720)
chr2 (149-237)||(43490413-43490501)
chr2 (151-237)||(12302265-12302351)
chr2 (151-237)||(16096749-16096835)
chr2 (187-248)||(13780736-13780797)
[»] chr7 (20 HSPs)
chr7 (151-255)||(40236921-40237025)
chr7 (151-255)||(33384872-33384977)
chr7 (151-255)||(27535225-27535329)
chr7 (151-255)||(31408627-31408731)
chr7 (151-255)||(31513289-31513393)
chr7 (149-237)||(43343636-43343724)
chr7 (149-237)||(44416946-44417034)
chr7 (151-237)||(42972854-42972940)
chr7 (149-248)||(4638200-4638299)
chr7 (149-237)||(10573749-10573837)
chr7 (149-237)||(44326178-44326266)
chr7 (151-237)||(5015397-5015483)
chr7 (151-237)||(35069723-35069809)
chr7 (152-237)||(26898414-26898499)
chr7 (151-237)||(9216304-9216389)
chr7 (151-237)||(24001024-24001110)
chr7 (151-237)||(42538443-42538529)
chr7 (151-234)||(43317445-43317528)
chr7 (151-248)||(24280597-24280694)
chr7 (151-216)||(39998410-39998475)
[»] chr5 (11 HSPs)
chr5 (151-255)||(32473388-32473492)
chr5 (151-255)||(17208076-17208180)
chr5 (151-255)||(30622713-30622816)
chr5 (149-237)||(5256995-5257083)
chr5 (151-237)||(7617135-7617221)
chr5 (151-237)||(22512307-22512393)
chr5 (151-237)||(33801471-33801557)
chr5 (151-237)||(2614661-2614747)
chr5 (151-237)||(18033984-18034070)
chr5 (151-237)||(41334675-41334761)
chr5 (151-221)||(33855071-33855141)
[»] chr4 (31 HSPs)
chr4 (151-255)||(55272370-55272474)
chr4 (151-255)||(17619146-17619250)
chr4 (151-255)||(32728359-32728463)
chr4 (151-255)||(711962-712066)
chr4 (155-255)||(48435573-48435673)
chr4 (149-255)||(38851513-38851619)
chr4 (149-255)||(35037005-35037111)
chr4 (151-255)||(960864-960968)
chr4 (151-255)||(46827700-46827804)
chr4 (149-254)||(3756242-3756346)
chr4 (149-237)||(27893854-27893942)
chr4 (151-229)||(49229684-49229762)
chr4 (149-237)||(43514698-43514786)
chr4 (151-237)||(27864566-27864652)
chr4 (151-248)||(28988475-28988572)
chr4 (185-255)||(19879990-19880060)
chr4 (151-237)||(27550311-27550397)
chr4 (203-255)||(36004110-36004162)
chr4 (151-239)||(48463460-48463548)
chr4 (149-248)||(41327544-41327643)
chr4 (151-237)||(1771278-1771364)
chr4 (151-237)||(23035982-23036068)
chr4 (151-237)||(33703143-33703229)
chr4 (187-237)||(39631139-39631189)
chr4 (151-237)||(55966358-55966444)
chr4 (151-236)||(28982835-28982920)
chr4 (151-248)||(41847973-41848070)
chr4 (149-237)||(31680902-31680990)
chr4 (151-237)||(41878408-41878494)
chr4 (187-237)||(43949813-43949863)
chr4 (151-237)||(45490325-45490411)
[»] scaffold0100 (1 HSPs)
scaffold0100 (151-255)||(35450-35554)
[»] chr6 (16 HSPs)
chr6 (151-255)||(33242405-33242509)
chr6 (149-255)||(27441542-27441648)
chr6 (151-249)||(33253915-33254013)
chr6 (149-237)||(24203999-24204087)
chr6 (151-237)||(7367551-7367637)
chr6 (151-237)||(13743233-13743319)
chr6 (151-237)||(13748733-13748819)
chr6 (151-237)||(26670021-26670107)
chr6 (149-234)||(30735982-30736067)
chr6 (151-255)||(31109216-31109320)
chr6 (151-234)||(7273350-7273433)
chr6 (151-237)||(7292749-7292835)
chr6 (151-237)||(9698345-9698431)
chr6 (151-237)||(26466801-26466887)
chr6 (151-248)||(3213402-3213499)
chr6 (151-248)||(30014345-30014442)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-255)||(45713-45819)
[»] scaffold0119 (1 HSPs)
scaffold0119 (151-237)||(687-773)
[»] scaffold0385 (1 HSPs)
scaffold0385 (151-237)||(11253-11339)
[»] scaffold0038 (1 HSPs)
scaffold0038 (151-237)||(112657-112743)


Alignment Details
Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 34304790 - 34304894
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34304790 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 34304889  T
Q  251 atctc 255  Q
    |||||    
T  34304890 atctc 34304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 35181518 - 35181622
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35181518 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 35181617  T
Q  251 atctc 255  Q
    |||||    
T  35181618 atctc 35181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 18066816 - 18066712
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||  ||||||||||   |||| |||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  18066816 aaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctttc 18066717  T
Q  251 atctc 255  Q
    |||||    
T  18066716 atctc 18066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 33630093 - 33629987
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||| ||||| | |||||||||||||   |||||||||   |||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  33630093 gaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T
Q  249 tcatctc 255  Q
    |||||||    
T  33629993 tcatctc 33629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 16603724 - 16603620
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||| ||| | |||||||||||||  |||| |||||  |||||||||  ||||||||||||| ||||||||||||||||| || |||||||    
T  16603724 aaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctttc 16603625  T
Q  251 atctc 255  Q
    |||||    
T  16603624 atctc 16603620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 29801050 - 29800962
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| |||||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  29801050 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 29800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 30912663 - 30912575
Alignment:
Q  148 ggaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacc 236  Q
    |||||||||||||||||||| | |||| || ||||| | ||||||||| ||||| |||||||  |||||||||| ||||||||||||||    
T  30912663 ggaaaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaacc 30912575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 42197533 - 42197447
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| |||||| || ||||| | |||| |||||  ||| |||||||| |||||||||| |||||||||||||||    
T  42197533 aaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaacca 42197447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 16358932 - 16358827
Alignment:
Q  151 aaaatgttacat-gaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 249  Q
    |||||||||||| ||| | | ||||||||||||| ||||||||||   ||||||||| | | |||||| ||| ||||||||||||||||| ||||| |||    
T  16358932 aaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttcttttt 16358833  T
Q  250 catctc 255  Q
    ||||||    
T  16358832 catctc 16358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 10678198 - 10678146
Alignment:
Q  203 attagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 255  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10678198 attaaggacattttggtaaattcatctcacaaccatactttctctttcatctc 10678146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 20148760 - 20148848
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| | |||| |||||||  | ||||||||| ||||  |||||||| |||||||||| |||||||||||||||    
T  20148760 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaacca 20148848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 42295195 - 42295283
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  42295195 gaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaacca 42295283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 26125635 - 26125723
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| | |||| |||||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  26125635 gaaaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 26125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 42699257 - 42699345
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| | |||| || ||||| | ||||||||| | ||| |||| ||| ||||| |||| |||||||||||||||    
T  42699257 gaaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaacca 42699345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 2546998 - 2547084
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| |  ||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||||||||||    
T  2546998 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaacca 2547084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 11582768 - 11582854
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  11582768 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 11582854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 29705364 - 29705450
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||| | |||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  29705364 aaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaacca 29705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 36743581 - 36743495
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  36743581 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 36743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 1375544 - 1375628
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaac 235  Q
    ||||| ||||||||||| | |||| |||||||| | |||||||||  |||  |||||||| |||||||||| || ||||||||||    
T  1375544 aaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaac 1375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 31384672 - 31384752
Alignment:
Q  157 ttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||| | |||| || ||||  |||||||||||  |||| |||||| | |||||||||| |||||||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaacca 31384752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 2166061 - 2165975
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||| ||||||||||| |||||| || ||||| | |||||| ||  |||| ||||| || |||||||||| ||||||||| |||||    
T  2166061 aaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataacca 2165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 5754905 - 5754991
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | ||||||||   |||  |||||||| |||||||||| |||||||||||||||    
T  5754905 aaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaacca 5754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 51454000 - 51453870
Alignment:
Q  1 aatggcgaggtggagaaacctgaacgttgagaatgtttgttacttgtattaggcatcgcatcagcgtggtatagtgtaaggagtggggtccataaaaccg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||                ||||||| ||||||||||||    
T  51454000 aatggcgaggtggagaaaactgaacgttgagaatgtttgttacttgtattaggcatcgcatcag----------------gagtggg-tccataaaaccg 51453918  T
Q  101 attctaaaatagcaataagtcataacttgctcattaaggttttttccg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51453917 attctaaaatagcaataagtcataacttgctcattaaggttttttccg 51453870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 44112679 - 44112783
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44112679 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 44112778  T
Q  251 atctc 255  Q
    |||||    
T  44112779 atctc 44112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 45427843 - 45427739
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||| | | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45427843 aaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 45427744  T
Q  251 atctc 255  Q
    |||||    
T  45427743 atctc 45427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 41065155 - 41065259
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| || ||||||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  41065155 aaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctttc 41065254  T
Q  251 atctc 255  Q
     ||||    
T  41065255 ctctc 41065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 48119630 - 48119734
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  48119630 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 48119729  T
Q  251 atctc 255  Q
    |||||    
T  48119730 atctc 48119734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 35000211 - 35000107
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||| || ||||| ||||||||||||||| ||| || |||||||||||||| ||||||||||    
T  35000211 aaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctttc 35000112  T
Q  251 atctc 255  Q
    |||||    
T  35000111 atctc 35000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 35003296 - 35003400
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||| ||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  35003296 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctttc 35003395  T
Q  251 atctc 255  Q
    |||||    
T  35003396 atctc 35003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 38113293 - 38113189
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||| ||||||| | ||||||||||||| |||||||||||  |||||||||  ||||||||||||| ||||||||||||||||| || |||||||    
T  38113293 aaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctttc 38113194  T
Q  251 atctc 255  Q
    |||||    
T  38113193 atctc 38113189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 38335920 - 38336024
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||||||  |||||||||   ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  38335920 aaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 38336019  T
Q  251 atctc 255  Q
    |||||    
T  38336020 atctc 38336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 45705827 - 45705931
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||| ||||||| | ||||||||||||  |||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  45705827 aaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 45705926  T
Q  251 atctc 255  Q
    |||||    
T  45705927 atctc 45705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 46168385 - 46168489
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||| |  |||||||||||   |||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  46168385 aaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 46168484  T
Q  251 atctc 255  Q
    |||||    
T  46168485 atctc 46168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 45639830 - 45639726
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    |||||||||||||||||   ||||||||||||  |||||||||||  ||| ||||| ||| |||||||||| |||||||||||| |||| ||||||||||    
T  45639830 aaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctttc 45639731  T
Q  251 atctc 255  Q
    |||||    
T  45639730 atctc 45639726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 26585464 - 26585568
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||| ||||||||  |||||||||||||  ||||||||||  ||||||||| ||| ||||| |||| |||||||| ||| |||| ||||||||||    
T  26585464 aaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctttc 26585563  T
Q  251 atctc 255  Q
    |||||    
T  26585564 atctc 26585568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 14427349 - 14427404
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcatta 206  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||    
T  14427349 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 43571184 - 43571098
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  43571184 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 43571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 48499060 - 48498974
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| |  ||||| | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  48499060 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 48498974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 2497662 - 2497574
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| |||||| |||||||  | |||||||||  |||  |||| ||| |||||||||| |||||||||||||||    
T  2497662 gaaaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaacca 2497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 5489778 - 5489864
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  5489778 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 5489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 4401327 - 4401416
Alignment:
Q  149 gaaaaatgttacatgaaca-tcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||| |||||||||| || |||| || |||||   |||||||||  |||| ||||| || |||||||||| |||||||||||||||    
T  4401327 gaaaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaacca 4401416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 7447826 - 7447913
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||||| |||| || ||||  | |||||||||  |||| ||||  || |||||| ||| |||||||||||||||    
T  7447826 gaaaaatgttacatgaacatcctttattcctacatcccattgtacac-ccatgtattacagatattttgataagttcatctcacaacca 7447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 9434126 - 9434230
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9434126 aaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 9434225  T
Q  251 atctc 255  Q
    |||||    
T  9434226 atctc 9434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 34791831 - 34791935
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||||||  ||||||| || ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  34791831 aaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctttc 34791930  T
Q  251 atctc 255  Q
    |||||    
T  34791931 atctc 34791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 51757595 - 51757699
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||| |||||| |||| | ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  51757595 aaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctttc 51757694  T
Q  251 atctc 255  Q
    |||||    
T  51757695 atctc 51757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 4190363 - 4190259
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| | ||| ||||| || |||||||||| ||||||||||||||||| ||||||||||    
T  4190363 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctttc 4190264  T
Q  251 atctc 255  Q
    |||||    
T  4190263 atctc 4190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 10457990 - 10457886
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| || |||||||||||||| ||||||||||    
T  10457990 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 10457891  T
Q  251 atctc 255  Q
    |||||    
T  10457890 atctc 10457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 25996270 - 25996374
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||   ||||||||||  |||  |||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  25996270 aaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctttc 25996369  T
Q  251 atctc 255  Q
    |||||    
T  25996370 atctc 25996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 52628075 - 52627972
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    |||||||||| |||||| | ||||||||||||  ||||||||||| |||||||||| | | |||||||||| |||||||||||| |||| ||||||||||    
T  52628075 aaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctttc 52627976  T
Q  251 atct 254  Q
    ||||    
T  52627975 atct 52627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 40808867 - 40808953
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| |||||| || ||||| | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  40808867 aaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 40808953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 27748562 - 27748662
Alignment:
Q  148 ggaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctct 247  Q
    |||||||||||||||||||| | |||| ||||||||   ||| ||||| | ||| |||||||| |||||||||| ||||||||||||| ||| ||| |||    
T  27748562 ggaaaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatct 27748661  T
Q  248 t 248  Q
    |    
T  27748662 t 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 25413683 - 25413769
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | ||||||||| | ||| |||||||| ||||| |||| |||||||||||||||    
T  25413683 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaacca 25413769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 42100690 - 42100776
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  42100690 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 42100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 45127026 - 45126940
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  45127026 aaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 45126940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 53273782 - 53273684
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 249  Q
    ||||||||| |||||||||||||| || || ||   ||||||||   |||| |||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  53273782 aaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 24688500 - 24688414
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||| | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  24688500 aaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 24688414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 42394517 - 42394431
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  42394517 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 42394431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 46941055 - 46941141
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||    |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  46941055 aaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 46941141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 54237098 - 54237184
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  54237098 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 54237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 51249350 - 51249407
Alignment:
Q  191 tacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||| |||||||||| ||| |||||||||| ||||||||||||||| | ||||||||    
T  51249350 tacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 53581958 - 53581870
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||||   |||| |||||||| | ||||||||    ||| |||||||| |||||| ||| |||||||||||||||    
T  53581958 gaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaacca 53581870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 36150132 - 36150218
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||| | | |||| |||||||| | ||| |||||   ||| || ||||| |||||||||| |||||||||||||||    
T  36150132 aaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaacca 36150218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 40480751 - 40480837
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |||||  | | ||||||||    ||| |||||||| |||||||||| |||||||||||||||    
T  40480751 aaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaacca 40480837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 54246246 - 54246160
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||   ||| ||||| || ||||| |||| |||||||||||||||    
T  54246246 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaacca 54246160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 43114559 - 43114663
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43114559 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 43114658  T
Q  251 atctc 255  Q
    |||||    
T  43114659 atctc 43114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 11825755 - 11825648
Alignment:
Q  148 ggaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctct 247  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  11825755 ggaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctct 11825656  T
Q  248 ttcatctc 255  Q
    ||||||||    
T  11825655 ttcatctc 11825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 41282083 - 41281968
Alignment:
Q  140 ttttttccggaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccata 239  Q
    |||||||  ||||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  41282083 ttttttcttgaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccata 41281984  T
Q  240 gtttctctttcatctc 255  Q
     |||||||||||||||    
T  41281983 ctttctctttcatctc 41281968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 12415558 - 12415454
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  12415558 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12415459  T
Q  251 atctc 255  Q
    |||||    
T  12415458 atctc 12415454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 12427618 - 12427514
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  12427618 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12427519  T
Q  251 atctc 255  Q
    |||||    
T  12427518 atctc 12427514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 16803970 - 16804074
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16803970 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16804069  T
Q  251 atctc 255  Q
    |||||    
T  16804070 atctc 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 16843252 - 16843356
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16843252 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16843351  T
Q  251 atctc 255  Q
    |||||    
T  16843352 atctc 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 18491707 - 18491811
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||| | |||||||||||| ||||||||||||||||| || |||||||    
T  18491707 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctttc 18491806  T
Q  251 atctc 255  Q
    |||||    
T  18491807 atctc 18491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 6518568 - 6518484
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 234  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6518568 gaaaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 966932 - 966828
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||| | || ||||||||| |||||||||||| |||| ||||||||||    
T  966932 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctttc 966833  T
Q  251 atctc 255  Q
    |||||    
T  966832 atctc 966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 34895835 - 34895735
Alignment:
Q  155 tgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatct 254  Q
    ||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 34895736  T
Q  255 c 255  Q
    |    
T  34895735 c 34895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 4299520 - 4299414
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||| ||||||| | ||||||||||||| |||||||||||  |||||||||  ||||||||||||| |||||||||||| |||| || |||||    
T  4299520 gaaaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactctt 4299421  T
Q  249 tcatctc 255  Q
    | |||||    
T  4299420 taatctc 4299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 4452026 - 4451944
Alignment:
Q  173 taatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 255  Q
    ||||||||||   ||||||||||   |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  4452026 taatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctc 4451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 12531740 - 12531657
Alignment:
Q  171 tttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 255  Q
    ||||||||||||| | ||||||||| ||| |||||| || | ||||||||| ||||||||||||||||| |||||||||||||||    
T  12531740 tttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctc 12531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 34817874 - 34817777
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||| | |||| ||| ||||   |||||||||  |||||| || | |||||||||||| ||||||||||||||| | ||||||||    
T  34817874 aaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 43335861 - 43335777
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaac 235  Q
    ||||||||| |||||||||||||| || |||||   ||||||||   |||| |||||||| |||||||||| |||||||||||||    
T  43335861 aaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaac 43335777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 1750416 - 1750502
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||   ||| |||||||| ||||| |||| |||||||||||||||    
T  1750416 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaacca 1750502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 4764824 - 4764738
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| |||||| || ||||| |||||||||||  |||| ||||   | |||||||||| |||||||||||||||    
T  4764824 aaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaacca 4764738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 19047159 - 19047245
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  19047159 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 19047245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 30838634 - 30838720
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||   ||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  30838634 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 30838720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 43490501 - 43490413
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| ||||||||| |||||    
T  43490501 gaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataacca 43490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 12302351 - 12302265
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||| | |||||||||   ||| |||||||| ||||| |||| |||||||||||||||    
T  12302351 aaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaacca 12302265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 16096749 - 16096835
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | ||| |||||  |||| |||||||| |||||||| | || ||||||||||||    
T  16096749 aaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaacca 16096835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 13780797 - 13780736
Alignment:
Q  187 attgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    |||||||||  ||| ||||||||| |||||| ||| ||||||||||||||| | ||||||||    
T  13780797 attgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 40236921 - 40237025
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40236921 aaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctttc 40237020  T
Q  251 atctc 255  Q
    |||||    
T  40237021 atctc 40237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 33384872 - 33384977
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacac-tattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 249  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||  |||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  33384872 aaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctcttt 33384971  T
Q  250 catctc 255  Q
    ||||||    
T  33384972 catctc 33384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 27535329 - 27535225
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||||  |||  ||||||||||||||||||||||||||| ||| ||||||||||    
T  27535329 aaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctttc 27535230  T
Q  251 atctc 255  Q
    |||||    
T  27535229 atctc 27535225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 31408731 - 31408627
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||   ||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||||    
T  31408731 aaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctttc 31408632  T
Q  251 atctc 255  Q
    |||||    
T  31408631 atctc 31408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 31513289 - 31513393
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    |||||||||||||||||   ||||||||||||| |||||||| ||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  31513289 aaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 31513388  T
Q  251 atctc 255  Q
    |||||    
T  31513389 atctc 31513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 43343724 - 43343636
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||||||||||| |  ||||| |||||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  43343724 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaacca 43343636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 44417034 - 44416946
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||||||||||| |  ||||| |||||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  44417034 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaacca 44416946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 42972854 - 42972940
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||| |||||||| |||| || ||||| | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  42972854 aaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 42972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 4638299 - 4638200
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||||| | |||| |||||||| | |||||||||  |||  |||| ||| |||||||||| ||||||||||||||||| ||| ||||    
T  4638299 gaaaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 10573749 - 10573837
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| | |||| |||||||  |||||||||||  |||| |||||| | |||||||||| |||||||||||||||    
T  10573749 gaaaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaacca 10573837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 44326178 - 44326266
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| | |||| |||||||  | ||||||||| ||||  |||||||| |||||||||| |||||||||||||||    
T  44326178 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaacca 44326266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 5015397 - 5015483
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| |  ||||| | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  5015397 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 5015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 35069723 - 35069809
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| || |||||   ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  35069723 aaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 35069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 26898499 - 26898414
Alignment:
Q  152 aaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||| | |||| |||||||| | ||||||||   |||| |||||||| |||||||||| ||||||| |||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaacca 26898414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 9216304 - 9216389
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || || |  |||||||||||  |||||||||| || |||||||||| |||||||||||||||    
T  9216304 aaaatgttacatgaacaccctttattcctatatcctattgtacacc-catgcattagagatattttggtaagttcatctcacaacca 9216389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 24001110 - 24001024
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  24001110 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 24001024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 42538529 - 42538443
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  42538529 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 42538443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 43317445 - 43317528
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 234  Q
    ||||||||||||||||| |||||| ||||||||   ||||||||    |||| ||||||| |||||| ||| ||||||||||||    
T  43317445 aaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaa 43317528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 24280694 - 24280597
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    |||||||||| |||||| | |||| |||||||| ||||| ||||   |||||| |||  | |||||||||| |||||||||||| || | ||||||||    
T  24280694 aaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 39998410 - 39998475
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacatttt 216  Q
    |||||||||||||||||   ||||||||||||  |||||||||||  |||| |||||||| |||||    
T  39998410 aaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 32473492 - 32473388
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | |||||||||||||  ||||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  32473492 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctttc 32473393  T
Q  251 atctc 255  Q
    |||||    
T  32473392 atctc 32473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 17208076 - 17208180
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    |||||||||| |||||| | |||||||||||||  ||||||||||  ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  17208076 aaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctttc 17208175  T
Q  251 atctc 255  Q
    |||||    
T  17208176 atctc 17208180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 30622816 - 30622713
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  |  ||||||||| ||| |||||||||| || |||||||||||||| ||||||||||    
T  30622816 aaaatgttacatgaacatcctttaatcatacaccctattgtaagcc-catgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 30622718  T
Q  251 atctc 255  Q
    |||||    
T  30622717 atctc 30622713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 5256995 - 5257083
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| |||||| |||||||  | |||||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  5256995 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaacca 5257083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 7617135 - 7617221
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |||||||| | ||| |||||  |||| |||||||| |||||||||| |||||||||||||||    
T  7617135 aaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaacca 7617221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 22512307 - 22512393
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  22512307 aaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaacca 22512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 33801471 - 33801557
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| |||| |  ||||| | |||||||||  |||| |||||||| ||||| |||| |||||||||||||||    
T  33801471 aaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaacca 33801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 2614747 - 2614661
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  2614747 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 2614661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 18033984 - 18034070
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||   ||| |||||||| ||||| |||| |||||||||||||||    
T  18033984 aaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaacca 18034070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 41334761 - 41334675
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| ||||||||   ||| |||||   ||| |||||||| |||||||||| |||||||||||||||    
T  41334761 aaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaacca 41334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 33855141 - 33855071
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaa 221  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||  |||| |||||| ||||||||||||    
T  33855141 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 55272474 - 55272370
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  55272474 aaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 55272375  T
Q  251 atctc 255  Q
    |||||    
T  55272374 atctc 55272370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 17619250 - 17619146
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  17619250 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 17619151  T
Q  251 atctc 255  Q
    |||||    
T  17619150 atctc 17619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 32728359 - 32728463
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||| ||||||||| |||| |||||||||||| |||| ||||||||||    
T  32728359 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctttc 32728458  T
Q  251 atctc 255  Q
    |||||    
T  32728459 atctc 32728463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 711962 - 712066
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||   |||||||| ||| |||||||||| |||||||||||| |||| ||||||||||    
T  711962 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctttc 712061  T
Q  251 atctc 255  Q
    |||||    
T  712062 atctc 712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 48435673 - 48435573
Alignment:
Q  155 tgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatct 254  Q
    ||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  48435673 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 48435574  T
Q  255 c 255  Q
    |    
T  48435573 c 48435573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 38851513 - 38851619
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||| ||| ||||||||||||   || |||||||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||    
T  38851513 gaaaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T
Q  249 tcatctc 255  Q
    |||||||    
T  38851613 tcatctc 38851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 35037005 - 35037111
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    |||||||||||||||| || | ||||| ||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||| ||||    
T  35037005 gaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctt 35037104  T
Q  249 tcatctc 255  Q
    || ||||    
T  35037105 tcttctc 35037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 960968 - 960864
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||   || |||||||||||||||||||| ||||||| | || | || ||||||||||    
T  960968 aaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtactttctctttc 960869  T
Q  251 atctc 255  Q
    |||||    
T  960868 atctc 960864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 46827804 - 46827700
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||   |||||||| | || ||||||||| || ||||||||| |||| ||||||||||    
T  46827804 aaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctttc 46827705  T
Q  251 atctc 255  Q
    |||||    
T  46827704 atctc 46827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 3756346 - 3756242
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||  ||||||||| ||| ||||| |||| || ||||||||| |||| ||| ||||    
T  3756346 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctt 3756248  T
Q  249 tcatct 254  Q
    ||||||    
T  3756247 tcatct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 27893942 - 27893854
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||| |||| |||||| |||||||  | |||||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  27893942 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaacca 27893854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 49229762 - 49229684
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatct 229  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||| ||| ||| |||||| |||||||    
T  49229762 aaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 43514786 - 43514698
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| | |||| || ||||| | ||||||||| ||||| |||||||  |||||||||| |||||||||||||||    
T  43514786 gaaaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaacca 43514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 27864566 - 27864652
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| |||||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  27864566 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 27864652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 28988475 - 28988572
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||| | |||| ||||||||   |||||||||  |||||| ||||||||||||| ||| ||||||||| ||||| | ||||||||    
T  28988475 aaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 19879990 - 19880060
Alignment:
Q  185 ctattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 255  Q
    |||||||||||  |||  |||| |||||||||||||| |||||||||||| |||| |||||||||||||||    
T  19879990 ctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctc 19880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 27550311 - 27550397
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||| | ||||||||| ||||| |||||||| |||||||||| ||||||| |||||||    
T  27550311 aaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaacca 27550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 36004162 - 36004110
Alignment:
Q  203 attagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 255  Q
    ||||||||||||||| ||| || |||||||||||||| |||||||||||||||    
T  36004162 attagggacattttgataaatttatctcacaaccatactttctctttcatctc 36004110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 48463548 - 48463460
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccata 239  Q
    |||||||||||| |||| |||||| |||||||    ||||||||   |||| |||||||| |||||||||| |||||||||||||||||    
T  48463548 aaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccata 48463460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 41327643 - 41327544
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||  ||| | |||| ||| |||| | ||||||||| | ||||| || |||||||||||||| ||||||||||| ||| | ||||||||    
T  41327643 gaaaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 1771364 - 1771278
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||| | |||||||||  |||| ||||| || |||||| ||| |||||||||||||||    
T  1771364 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaacca 1771278  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 23035982 - 23036068
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||| || |||| || ||||| |||||||||||   ||  |||||||| ||||| |||| |||||||||||||||    
T  23035982 aaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaacca 23036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 33703143 - 33703229
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |  ||||   ||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  33703143 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 33703229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 39631139 - 39631189
Alignment:
Q  187 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  39631139 attgtacacctcatgtattagggatattttggtaagttcatctcacaacca 39631189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 55966444 - 55966358
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| | |||| |||||||  | ||||||||   |||| |||||||| |||||||||| |||||||||||||||    
T  55966444 aaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 55966358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 28982920 - 28982835
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacc 236  Q
    ||||||||||||||||| | |||| |  ||||| ||||||||||   |||  |||||||| |||||||||| ||||||||||||||    
T  28982920 aaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaacc 28982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 41847973 - 41848070
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||| ||||||| |||  ||| ||||   |||||||||  |||||||||| |||||||||| || |||||| |||||||| | ||||||||    
T  41847973 aaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 31680902 - 31680990
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| | |||| |||||| |||||||  | |||||||||  | |  |||||||| |||||||||| |||||||||||||||    
T  31680902 gaaaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaacca 31680990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 41878408 - 41878494
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| ||||||||   |||||||||   || ||||||||| |||||| ||| |||||||||||||||    
T  41878408 aaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaacca 41878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 43949863 - 43949813
Alignment:
Q  187 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  43949863 attgtacaccccatgtattagggatattttggtaagttcatctcacaacca 43949813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 45490411 - 45490325
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||||||||   |||| | |||||  | ||||||||| ||||| |||||||| | ||| |||| |||||||||||||||    
T  45490411 aaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaacca 45490325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 35554 - 35450
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    |||||||||||| |||| |||||||||||||||  ||||||||||  |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  35554 aaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctttc 35455  T
Q  251 atctc 255  Q
    |||||    
T  35454 atctc 35450  T

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Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 33242405 - 33242509
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||  |||| |||| |||||||||||||| |||||||||||| |||| ||||||||||    
T  33242405 aaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctttc 33242504  T
Q  251 atctc 255  Q
    |||||    
T  33242505 atctc 33242509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 27441542 - 27441648
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||    ||| |||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  27441542 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T
Q  249 tcatctc 255  Q
    |||||||    
T  27441642 tcatctc 27441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 33253915 - 33254013
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 249  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| |||||    
T  33253915 aaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttt 33254013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 24204087 - 24203999
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||||| |||||| || ||||| |||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  24204087 gaaaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaacca 24203999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 7367551 - 7367637
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||| |||||||||||||| ||||||||   ||||||||   |||| |||||||| |||||||||| |||||||||||||||    
T  7367551 aaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 7367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 13743319 - 13743233
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  13743319 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 13743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 13748819 - 13748733
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  13748819 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 13748733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 26670107 - 26670021
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || |||||   ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  26670107 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 26670021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 30735982 - 30736067
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 234  Q
    |||||||||||||||||||   |||| || ||||| | ||||||||| ||||| ||||| || |||||||||| ||||||||||||    
T  30735982 gaaaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaa 30736067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 31109320 - 31109216
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 250  Q
    ||||||||||||||||| | ||||||||||||  | ||| |||||  |||||| |||||| |||||| ||| |||| || || |||| | ||||||||||    
T  31109320 aaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctttc 31109221  T
Q  251 atctc 255  Q
    |||||    
T  31109220 atctc 31109216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 7273433 - 7273350
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 234  Q
    ||||||||||||||||| | |||| || |||||  ||||||||||  |||| ||||| || |||||||||| ||||||||||||    
T  7273433 aaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaa 7273350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 7292749 - 7292835
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||| ||||| |||||| ||||||||   ||| |||||   ||| |||||||| |||||||||| |||||||||||||||    
T  7292749 aaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaacca 7292835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 9698431 - 9698345
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  9698431 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 9698345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 26466801 - 26466887
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    |||||||||||| |||| | |||| || ||||| | |||||||||  |||| |||||||  |||||||||| |||||||||||||||    
T  26466801 aaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaacca 26466887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 3213402 - 3213499
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    |||||||||||| |||| | |||| |||||||    |||||||||  |||| |||| ||| |||||||||| ||||| ||||||||||| ||| ||||    
T  3213402 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 30014345 - 30014442
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||| | |||| || ||||  | ||| ||||   |||| |||||| | |||||||||| ||||||||||||||||| ||| ||||    
T  30014345 aaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 45819 - 45713
Alignment:
Q  149 gaaaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 248  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||    ||| |||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  45819 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T
Q  249 tcatctc 255  Q
    |||||||    
T  45719 tcatctc 45713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 687 - 773
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || |||||   ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  687 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 11253 - 11339
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||| |||||||||   |||| |||||||| | |||||||||  |||  |||||||| |||||||||| |||||||||||||||    
T  11253 aaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaacca 11339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 112657 - 112743
Alignment:
Q  151 aaaatgttacatgaacatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 237  Q
    ||||||||||||||||| | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  112657 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 112743  T

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