View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10711_low_10 (Length: 319)
Name: NF10711_low_10
Description: NF10711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10711_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 3 - 315
Target Start/End: Complemental strand, 45641497 - 45641185
Alignment:
| Q |
3 |
acaagacagacaaattccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtgga |
102 |
Q |
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| T |
45641497 |
acaatacagacaaattccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtgga |
45641398 |
T |
|
| Q |
103 |
ttgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactaccagttgacccattag |
202 |
Q |
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| T |
45641397 |
ttgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactactagttgacccattag |
45641298 |
T |
|
| Q |
203 |
ggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccacctt |
302 |
Q |
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| T |
45641297 |
ggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccacctt |
45641198 |
T |
|
| Q |
303 |
acctatgctactc |
315 |
Q |
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|||| |||||||| |
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| T |
45641197 |
acctctgctactc |
45641185 |
T |
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