View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10711_low_12 (Length: 278)
Name: NF10711_low_12
Description: NF10711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10711_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 45641866 - 45641613
Alignment:
| Q |
18 |
atatagcagggaattcagtttttatatacacaatacaccacttctcggacgatcaaaagaggtaggacaagtagaggttcctgaatgtcaaggattccaa |
117 |
Q |
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| T |
45641866 |
atatagcagggaattcagtttttatatacacaatacaccacttctcggacgatcaaaagaggtaggacaagtagaggttcctgaatgtcaaggattccaa |
45641767 |
T |
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| Q |
118 |
ttttcatccacctctttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaacttaatggaccacattgctctaaatgaaaatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641766 |
ttttcatccacctctttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaacttaatggaccacattgctctaaatgaaaatg |
45641667 |
T |
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| Q |
218 |
acaacagatattctcactatgagtttctctacatgttctgatgctattcttgcc |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641666 |
acaacagatattctcactatgagtttctctacatgttctgatgctattcttgcc |
45641613 |
T |
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