View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10713_high_3 (Length: 244)
Name: NF10713_high_3
Description: NF10713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10713_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 2461940 - 2462166
Alignment:
| Q |
1 |
ttttttgcaagctcttaattaatcaacactaacagttattgtcgttgttccctgtaaaatgagccaccgtaataattacattgcaattggtggaaagcag |
100 |
Q |
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| T |
2461940 |
ttttttgcaagcaattaattaatcaacactaacagttactgtcgttgttccctgtaaaatgagccaccgtaataattacattgcaattggtggaaagcag |
2462039 |
T |
|
| Q |
101 |
ccaaatatttcttgtcatagaagaaatttctttgtggaaaattctattaccccttggcacttgtctttcttgcatacacatttcctttctcaattatcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2462040 |
ccaaatatttcttgtcatagaagaaatttctttgtggaaaattctattaccccttggcacttgtctttcttgcatacacatttcctttctctattatcaa |
2462139 |
T |
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| Q |
201 |
attttccctataaatatatcacaatag |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
2462140 |
attttccctataaatatatcacaatag |
2462166 |
T |
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