View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10714_high_2 (Length: 286)
Name: NF10714_high_2
Description: NF10714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10714_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 278
Target Start/End: Complemental strand, 3297252 - 3296992
Alignment:
| Q |
9 |
tacatattgatatcagtaataagttgaaaaatcacataatagaagatatagaatatatgtcgacgtcggatataagatatgttcaacattaaaatacgtc |
108 |
Q |
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| T |
3297252 |
tacatattgatatcattaataatttaaaaaatcacataatagaagatatagaatatatgtcgacgtcggatataagatatgttcaacattggaacacgtc |
3297153 |
T |
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| Q |
109 |
taatctaaggaaagtctgcactatatagagtatatataatatgaatttacaatgaaaaataaaaacttgaaggtgatcaatcaaatcaacacaagccttt |
208 |
Q |
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|||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3297152 |
taatatgaggaaagt---------atagagtatatataatatgaatttacaatgaaaaataaaaacttgaaggtgatcaatcaaatcaacacaagccttt |
3297062 |
T |
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| Q |
209 |
ttgctcccaactagtttgtcttccacatacatacacccaccaaccagaacccatgtgggctatctctgct |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3297061 |
ttgctcccaactagtttgtcttccacatacatacacccaccaaccagaacccatgtgggctatctctgct |
3296992 |
T |
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