View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10714_low_10 (Length: 209)
Name: NF10714_low_10
Description: NF10714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10714_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 7033081 - 7033264
Alignment:
| Q |
17 |
cagaccatgctttagatgagatatgtgtttctaag-------caatcgttacattataaaccaacattgtaagatttgaattagctccaattcaaattct |
109 |
Q |
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| T |
7033081 |
cagatcatgctttagatgagatatttgtttgtaagtggatgacaattgttacattataaaccaacattgtaagatttgaattagcttcaattcaaattct |
7033180 |
T |
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| Q |
110 |
aagagagtgcgcaaacaatgccaacataggatttgaaataacaaacaagcccgcaaatatgtttaaattaaatgaagatagata |
193 |
Q |
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| T |
7033181 |
aagagagtgcgcaaacaatgccaacataggatttgaaataacaaacaagcccgcaaatatgtttaaattaaatcaagatagata |
7033264 |
T |
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