View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10714_low_5 (Length: 256)
Name: NF10714_low_5
Description: NF10714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10714_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 28035690 - 28035935
Alignment:
| Q |
1 |
aaagcagagcgtctcaattctgcatgttctgctgccacagatgttatttccatcaaagccattgctgaataatgttgcacatcatctgtacccttttcca |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
28035690 |
aaagcagaacgtctcaattctgcatgttctgctgccacagatgttatttccatcaaagccattgctgaataatgttgcacatcatcagtacccttttcca |
28035789 |
T |
|
| Q |
101 |
acaaaaccgcgaaacacaaaagagctcttgattctgtaattgtatgacaaatagtaacatttcttctacacaattgccataaagctctagctgccattgc |
200 |
Q |
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|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28035790 |
acaaaaccgcaaaacacaaaagagctcttgattctgtaattgtatgacaaatagtaacatttcttctacacaattgccataaagctctagctgccattgc |
28035889 |
T |
|
| Q |
201 |
tttcatttgtgcctttgtttcaggatcttcaaattctctccctttg |
246 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
28035890 |
tttcatttgtgcctttgtttcaggatcttcaaattctctccctttg |
28035935 |
T |
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