View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10716_high_15 (Length: 252)
Name: NF10716_high_15
Description: NF10716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10716_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 32915213 - 32914973
Alignment:
| Q |
1 |
tcaagaatgtctatcgaggaagtagctaattggggtgtagtgacagtactggtgagtctgtcgagattttcttctcacgtgaagtaactggcggtgcttt |
100 |
Q |
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| T |
32915213 |
tcaagaatgtctatcgaggaagtagctaattggggtgtagtgacagtactggtgagtctgtcgagattttcttctcacgtgaagtaactggcggtgcttt |
32915114 |
T |
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| Q |
101 |
tgggcttgtgtaccggctgtgagtttttaggagcgcatattacagatgcacagttctagctggatggttttgaggcttcggtatgcagtgatggagtaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32915113 |
tgggcttgtgtaccggctgtgagtttttaggagcgcatattacagatgcacagttctagctggatggttttgaggcttcggtatgcagtgatgaagtaca |
32915014 |
T |
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| Q |
201 |
taggatcaattgtataggcagtgcttaagggctgttctgtg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
32915013 |
taggatcaattgtataggcagtgcttaagggctgttctgtg |
32914973 |
T |
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