View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10716_low_9 (Length: 296)
Name: NF10716_low_9
Description: NF10716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10716_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 37160181 - 37160465
Alignment:
| Q |
1 |
caccggtaggagtgaaaatatctgtatggattgaattacttcatctgcactagaaggtgtgtaaagattagtatcgaaattccatcagttgagccatgat |
100 |
Q |
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| T |
37160181 |
caccggtaggagtgaaaatatctgtatggattgaattacttcatctgcactagaaggtgtgtaaagattactatcgaaattccatcacttgagccatgat |
37160280 |
T |
|
| Q |
101 |
tttcactatgaattgtgctacttcctttcattgtttatttgtctaagaaacctttgttgggtgtttctagccattgtgttagtaggacaatgtggtagtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
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| T |
37160281 |
tttcactatgaattgtgctacttcctttcattgtttatctgtctaagaaaccttttttaggtgtttctagccattgtgttagtaggacaatgtggtagtc |
37160380 |
T |
|
| Q |
201 |
tggtagacttgtagctgatggaaatatgatgtttccaaataaagtaaacaagatgaaaatgtatcatcttcactttctcattcat |
285 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
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| T |
37160381 |
tggtagacttgtagctgatggaaatatgatttttccaaataaagtaaacaagatgaaaatgtgtcatctttactttctcattcat |
37160465 |
T |
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