View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10718_low_13 (Length: 261)
Name: NF10718_low_13
Description: NF10718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10718_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 32343201 - 32343444
Alignment:
| Q |
1 |
caactacaaattatattaattcaaggcttatttgcttcaacaacattcttgtgaccaccaatgaaaccgccaactccaccaataacaccccctccaatcc |
100 |
Q |
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|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32343201 |
caactacaaactatattaatttaaggcttatttgcttcaacaacattcttgtgaccaccaatgaaaccaccaactccaccaataacaccccctccaatcc |
32343300 |
T |
|
| Q |
101 |
ctcctacacctcctccaattcctttgtaagcaaaacctccaattccacctccaattcccttagatgttccacctccataacctccaattccacctacaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
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| T |
32343301 |
ctcctacacctcctccaattcctttgtaagcaaaacctccaattccacctccaattcccttagatattccacctccataacctccaattccaccaacaat |
32343400 |
T |
|
| Q |
201 |
tcccttagatattccacctcctccataaccaccacctaaacctc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32343401 |
tcccttagatattccacctcctccataaccaccacctaaacctc |
32343444 |
T |
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