View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10719_high_4 (Length: 326)
Name: NF10719_high_4
Description: NF10719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10719_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 310
Target Start/End: Complemental strand, 5537977 - 5537682
Alignment:
| Q |
15 |
gatttgtaaccagttgtatagaaaataacttcacggatatctacaaccgaaaagaaagaaacaaattgaattaacgttgaatctcaaaagtgtactcacg |
114 |
Q |
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| T |
5537977 |
gatttataactagttgcgtagaaaataacttcacggacatctacaacagaaaagaaagaaacaaattgaattaacgttgaatctcaaaagtgtactcatg |
5537878 |
T |
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| Q |
115 |
aaaaatttattgtcaaatatcctacaatttctgttcataacgatgtaaatcaaaataaattattttccacggctgaaaatctagagaatgaacaagtaaa |
214 |
Q |
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| T |
5537877 |
aaaaatttattgtcaaatatcctacaatttctgttcataacgatgtaaatccaaataaattattttccacggctgaaaatctagagaatgaacaagtaaa |
5537778 |
T |
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| Q |
215 |
taaataggagtagagcgagataatttgaatgaattcaatgaaaatgaacatattcatgcctttgatgggaacaacttgtttggtgtatgtttgttc |
310 |
Q |
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| T |
5537777 |
taaataggagtagagtgagataatttgaatgaattcaatgaaaatgaacatattcatgcctttgatgggaacaacttgtttggtgtatgtttgttc |
5537682 |
T |
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