View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10719_low_35 (Length: 240)
Name: NF10719_low_35
Description: NF10719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10719_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5377477 - 5377697
Alignment:
| Q |
1 |
agttgaatgaaaaattgattgaatgaaaggatgaaggtgtaaagagaatgaatagaaaacgcacgcgcagcaataaaaaggaagacgtttgaaaacggtg |
100 |
Q |
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| T |
5377477 |
agttgaatgaaaaattgattgaatgaaaggatgaaggtgtaaagagaatgaatagaaaacgcacgcgcagcaataaaaaggaagacgtttgaaaacggtg |
5377576 |
T |
|
| Q |
101 |
cgattttctttggatttgtaaccgccccattccgttgcccactcagttttggttaagaacattcggtctttgctgtgctgcttcttccccattgttaggg |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5377577 |
cgattttctttggatttgtaaccaccccattccgttgcccactcagttttggttaagaacattcggtctttgctgtgctgcttcttccccattgttaggg |
5377676 |
T |
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| Q |
201 |
tttttgttgattactactgtg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
5377677 |
tttttgttgattactactgtg |
5377697 |
T |
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