View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10719_low_40 (Length: 233)
Name: NF10719_low_40
Description: NF10719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10719_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 43635935 - 43636108
Alignment:
| Q |
16 |
aacctgtgccctattacagaagtttgatacaatgaagaacacataagtttaacaactttgaagatgaggccttttctgaaaacaacccaaaaattcatta |
115 |
Q |
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| T |
43635935 |
aacctgtgccctattacagaagtttgatacaatgaagaacacataagtttaacaactttgaagatgagaccttttctgaaaacaacccaaaaattcataa |
43636034 |
T |
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| Q |
116 |
gccactatttttgaattatatatagaaaaattcaatttttgcataagaaaatatatctaactaaaactcacccc |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43636035 |
gccactatttttgaattatatatagaaaaattcaatttttgcataagaaaatatatctaactaaaactcacccc |
43636108 |
T |
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