View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10719_low_44 (Length: 229)
Name: NF10719_low_44
Description: NF10719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10719_low_44 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24356121 - 24356347
Alignment:
| Q |
1 |
ttacacctttagcagccaaccactcaacaatagccttgttggcaattcgcgctttcttcggactagctgaaggagtagctcttccatccatgagcactct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24356121 |
ttacacctttagcagccaaccactcaacaatagccttgttggcaattcgcgctttcttcggactagctgaaggagtagctcttccatccatgagcactct |
24356220 |
T |
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| Q |
101 |
cttatcaaggtgatacgtctaaaatctccttagacatatatatatttaaggtttaattattcatttagtcttgcaaatatggctaactttgatgttagtt |
200 |
Q |
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|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24356221 |
cttatcaaggtgatacctctaaaatctccttagac--atatatatttaaggtttaattattcatttagtcttgcaaatatggctaactttgatgttagtt |
24356318 |
T |
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| Q |
201 |
cttgtaaataaatagttaaaccgatactt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
24356319 |
cttgtaaataaatagttaaaccgatactt |
24356347 |
T |
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