View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10720_low_14 (Length: 306)
Name: NF10720_low_14
Description: NF10720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10720_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 12 - 277
Target Start/End: Original strand, 10729152 - 10729417
Alignment:
| Q |
12 |
gatggacatcacaacacaagaaaaaacacacgcatgcatgcatgaaaatcgaaaacaacgacaacgatgatgacgaaaatgcaaacctcgggttgagcag |
111 |
Q |
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| T |
10729152 |
gatgaacataacaacacaagaaaaaacacacgcatgcatgcatgaaaatcaaaaacaacaacaacgatgatgacgaaaatgcaaacctcgggttgagcag |
10729251 |
T |
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| Q |
112 |
aatccttgagaggatcaatggagacgacaaccttagcaacaggaagagaagagtcggaagaagatgggccccgcaaagattgagccacaaccggcggaca |
211 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10729252 |
aatccttgagaggatcaatggagacgacgaccttagcaacaggaagagaagagtcagaagaagatggtccccgcaaagattgagccacaaccggcggaca |
10729351 |
T |
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| Q |
212 |
tttcatcaaccaaaccggtgcatctgcctttgaagtgtcgacgtaaccaccgacacgtccgccacc |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10729352 |
tttcatcaaccaaaccggtgcatctgcctttgaagtgtcgacgtaaccaccgacacgtccgccacc |
10729417 |
T |
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