View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10721_high_1 (Length: 440)

Name: NF10721_high_1
Description: NF10721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10721_high_1
NF10721_high_1
[»] chr8 (57 HSPs)
chr8 (16-116)||(41124702-41124802)
chr8 (16-116)||(41124393-41124493)
chr8 (221-308)||(41124848-41124935)
chr8 (221-308)||(41124537-41124624)
chr8 (323-428)||(5513983-5514087)
chr8 (323-428)||(10007758-10007863)
chr8 (323-428)||(30336496-30336601)
chr8 (325-425)||(11282011-11282111)
chr8 (323-426)||(1823553-1823656)
chr8 (323-426)||(1857998-1858101)
chr8 (323-414)||(12351922-12352013)
chr8 (130-189)||(41124657-41124716)
chr8 (335-428)||(1824073-1824167)
chr8 (335-428)||(1858518-1858612)
chr8 (323-428)||(10006345-10006450)
chr8 (336-425)||(18970924-18971013)
chr8 (323-428)||(22221359-22221464)
chr8 (323-428)||(22227701-22227806)
chr8 (325-414)||(29968346-29968434)
chr8 (323-414)||(12353370-12353459)
chr8 (325-418)||(8389694-8389787)
chr8 (336-425)||(18978033-18978122)
chr8 (323-428)||(30335640-30335745)
chr8 (325-425)||(11287779-11287879)
chr8 (324-428)||(43661267-43661371)
chr8 (323-425)||(18979118-18979220)
chr8 (323-428)||(22220389-22220494)
chr8 (323-428)||(30568888-30568992)
chr8 (338-428)||(24123893-24123983)
chr8 (325-417)||(40471153-40471244)
chr8 (323-414)||(24122884-24122974)
chr8 (323-424)||(8388465-8388564)
chr8 (323-428)||(32207320-32207423)
chr8 (150-189)||(41124969-41125008)
chr8 (325-428)||(30570251-30570353)
chr8 (323-425)||(11283207-11283309)
chr8 (323-369)||(11288914-11288960)
chr8 (323-373)||(36249553-36249603)
chr8 (327-413)||(43661833-43661919)
chr8 (327-417)||(45114523-45114612)
chr8 (323-428)||(5514266-5514369)
chr8 (323-428)||(24359810-24359913)
chr8 (323-375)||(24483144-24483196)
chr8 (324-428)||(29043400-29043504)
chr8 (323-375)||(32973984-32974036)
chr8 (340-399)||(24488703-24488762)
chr8 (323-388)||(23170034-23170097)
chr8 (323-376)||(3819490-3819542)
chr8 (323-359)||(1824185-1824221)
chr8 (323-359)||(1858630-1858666)
chr8 (323-375)||(11456639-11456691)
chr8 (323-375)||(32968457-32968509)
chr8 (327-375)||(36336845-36336893)
chr8 (323-375)||(38974796-38974848)
chr8 (323-375)||(38980092-38980144)
chr8 (323-375)||(39005894-39005946)
chr8 (323-375)||(39011189-39011241)
[»] chr1 (48 HSPs)
chr1 (323-428)||(11437194-11437299)
chr1 (325-428)||(39153111-39153214)
chr1 (323-428)||(45148582-45148686)
chr1 (323-428)||(11436043-11436148)
chr1 (323-414)||(24422801-24422892)
chr1 (323-414)||(52274969-52275060)
chr1 (323-428)||(51684367-51684472)
chr1 (325-428)||(45149965-45150068)
chr1 (325-428)||(39151934-39152037)
chr1 (325-428)||(50680335-50680437)
chr1 (323-428)||(45157204-45157308)
chr1 (323-428)||(51685760-51685865)
chr1 (323-414)||(36613913-36614004)
chr1 (325-414)||(24426084-24426173)
chr1 (323-428)||(36612854-36612958)
chr1 (323-426)||(23980463-23980566)
chr1 (323-414)||(39699776-39699866)
chr1 (325-428)||(43378708-43378810)
chr1 (323-425)||(33088615-33088717)
chr1 (323-425)||(35067000-35067102)
chr1 (323-428)||(39222468-39222574)
chr1 (323-400)||(14999286-14999362)
chr1 (323-428)||(35594218-35594321)
chr1 (323-428)||(43060001-43060106)
chr1 (323-428)||(44404443-44404548)
chr1 (323-399)||(39698564-39698640)
chr1 (325-428)||(37526873-37526975)
chr1 (325-428)||(43058789-43058891)
chr1 (323-414)||(52827348-52827439)
chr1 (325-417)||(45156052-45156144)
chr1 (345-428)||(7675454-7675537)
chr1 (323-414)||(41364830-41364920)
chr1 (323-400)||(7674529-7674604)
chr1 (346-431)||(46066547-46066631)
chr1 (325-414)||(52828079-52828168)
chr1 (323-414)||(41366140-41366230)
chr1 (325-414)||(7983053-7983141)
chr1 (323-428)||(25652716-25652820)
chr1 (323-415)||(11190386-11190478)
chr1 (323-395)||(14999983-15000055)
chr1 (323-398)||(16290094-16290170)
chr1 (325-428)||(40384727-40384831)
chr1 (323-395)||(50681632-50681704)
chr1 (323-428)||(35595187-35595293)
chr1 (325-414)||(30249499-30249588)
chr1 (325-414)||(52276172-52276261)
chr1 (323-425)||(12389980-12390081)
chr1 (326-375)||(7987905-7987952)
[»] chr5 (40 HSPs)
chr5 (325-428)||(24332916-24333019)
chr5 (323-428)||(25523070-25523175)
chr5 (323-428)||(22940618-22940722)
chr5 (323-425)||(28538677-28538779)
chr5 (323-428)||(18486897-18487002)
chr5 (323-428)||(19752913-19753017)
chr5 (327-414)||(36486497-36486584)
chr5 (324-425)||(36485302-36485403)
chr5 (323-399)||(18154495-18154570)
chr5 (323-414)||(33160295-33160386)
chr5 (323-425)||(1796055-1796157)
chr5 (323-428)||(19754125-19754231)
chr5 (323-428)||(16650850-16650955)
chr5 (323-412)||(33158099-33158188)
chr5 (323-414)||(25056390-25056481)
chr5 (323-418)||(40255677-40255772)
chr5 (325-414)||(28539829-28539917)
chr5 (323-414)||(5778845-5778936)
chr5 (325-428)||(42195137-42195238)
chr5 (323-414)||(5777902-5777991)
chr5 (323-399)||(18485139-18485215)
chr5 (323-399)||(20214197-20214272)
chr5 (325-425)||(20216761-20216861)
chr5 (361-428)||(25524093-25524160)
chr5 (365-425)||(21835083-21835143)
chr5 (325-428)||(2186774-2186876)
chr5 (323-397)||(5730442-5730517)
chr5 (351-418)||(5730867-5730934)
chr5 (377-428)||(16650047-16650098)
chr5 (340-414)||(7311608-7311682)
chr5 (341-398)||(2685763-2685820)
chr5 (323-428)||(25055413-25055518)
chr5 (323-399)||(25524151-25524228)
chr5 (330-410)||(1015492-1015572)
chr5 (335-425)||(1797295-1797385)
chr5 (346-396)||(34893689-34893739)
chr5 (325-398)||(38834090-38834162)
chr5 (323-428)||(42196195-42196300)
chr5 (346-414)||(2686410-2686478)
chr5 (323-398)||(5962597-5962670)
[»] chr3 (48 HSPs)
chr3 (323-425)||(54540788-54540890)
chr3 (323-428)||(7758403-7758508)
chr3 (323-428)||(19984850-19984955)
chr3 (323-425)||(29931227-29931329)
chr3 (323-425)||(29980381-29980483)
chr3 (325-414)||(7267647-7267735)
chr3 (323-414)||(12700176-12700265)
chr3 (323-428)||(19986065-19986172)
chr3 (323-414)||(29932708-29932798)
chr3 (323-414)||(29981862-29981952)
chr3 (323-414)||(54539756-54539847)
chr3 (323-428)||(47614186-47614291)
chr3 (323-414)||(8456479-8456569)
chr3 (325-428)||(23770402-23770505)
chr3 (323-428)||(534500-534605)
chr3 (323-428)||(12703495-12703599)
chr3 (326-414)||(24516464-24516552)
chr3 (323-426)||(22776809-22776912)
chr3 (349-428)||(31645000-31645079)
chr3 (335-425)||(55191993-55192083)
chr3 (323-428)||(11671336-11671440)
chr3 (325-414)||(47610589-47610678)
chr3 (323-419)||(535786-535882)
chr3 (325-414)||(7268836-7268924)
chr3 (323-380)||(47615591-47615648)
chr3 (331-414)||(6170281-6170362)
chr3 (336-428)||(34019140-34019232)
chr3 (323-414)||(8875907-8875998)
chr3 (323-426)||(46719942-46720045)
chr3 (323-414)||(47609698-47609789)
chr3 (323-414)||(51469973-51470064)
chr3 (323-399)||(51038814-51038890)
chr3 (331-398)||(6249618-6249685)
chr3 (323-426)||(46721217-46721320)
chr3 (323-414)||(51470464-51470554)
chr3 (323-414)||(52840613-52840704)
chr3 (323-397)||(5001201-5001275)
chr3 (325-414)||(40426787-40426877)
chr3 (323-425)||(51037537-51037638)
chr3 (323-428)||(49216248-49216353)
chr3 (325-425)||(51347271-51347371)
chr3 (323-399)||(53614820-53614896)
chr3 (323-398)||(5029708-5029782)
chr3 (323-408)||(53901403-53901486)
chr3 (327-413)||(23769862-23769947)
chr3 (336-428)||(52104494-52104583)
chr3 (325-369)||(39843054-39843098)
chr3 (325-397)||(53616042-53616114)
[»] chr4 (44 HSPs)
chr4 (325-428)||(12129626-12129729)
chr4 (323-428)||(1290193-1290298)
chr4 (323-414)||(8757676-8757766)
chr4 (327-425)||(31599794-31599892)
chr4 (323-425)||(31600983-31601085)
chr4 (323-414)||(10471397-10471488)
chr4 (323-428)||(1835097-1835202)
chr4 (325-414)||(8758846-8758935)
chr4 (323-399)||(49308051-49308126)
chr4 (323-414)||(25685831-25685922)
chr4 (323-425)||(1963197-1963299)
chr4 (323-425)||(17382994-17383095)
chr4 (324-414)||(19750584-19750673)
chr4 (324-414)||(19789133-19789222)
chr4 (323-399)||(17388235-17388310)
chr4 (323-414)||(26421631-26421721)
chr4 (323-428)||(1834120-1834226)
chr4 (323-424)||(1964440-1964541)
chr4 (323-436)||(13509346-13509458)
chr4 (325-414)||(35935542-35935631)
chr4 (323-399)||(49306776-49306851)
chr4 (323-414)||(10470547-10470638)
chr4 (323-414)||(25684935-25685026)
chr4 (323-414)||(48780249-48780340)
chr4 (323-428)||(10447007-10447113)
chr4 (325-428)||(8155741-8155843)
chr4 (323-411)||(13386544-13386633)
chr4 (332-428)||(21539066-21539162)
chr4 (335-414)||(5525372-5525451)
chr4 (323-414)||(5526135-5526225)
chr4 (323-414)||(52491616-52491707)
chr4 (323-397)||(13386015-13386090)
chr4 (323-425)||(21177998-21178099)
chr4 (323-428)||(50909667-50909773)
chr4 (325-414)||(37728574-37728662)
chr4 (323-414)||(48781055-48781145)
chr4 (325-399)||(55603555-55603628)
chr4 (323-428)||(10448255-10448360)
chr4 (323-399)||(3928882-3928958)
chr4 (325-428)||(1289100-1289203)
chr4 (323-397)||(14868891-14868964)
chr4 (323-397)||(14876970-14877043)
chr4 (325-414)||(35934347-35934434)
chr4 (325-398)||(55602379-55602451)
[»] scaffold0320 (1 HSPs)
scaffold0320 (323-428)||(19489-19594)
[»] chr7 (32 HSPs)
chr7 (323-428)||(18371425-18371530)
chr7 (323-414)||(31659623-31659715)
chr7 (323-414)||(3227603-3227694)
chr7 (336-428)||(18372452-18372544)
chr7 (323-412)||(22630463-22630552)
chr7 (323-419)||(17782557-17782653)
chr7 (323-414)||(31949811-31949902)
chr7 (342-428)||(22629506-22629592)
chr7 (323-428)||(7500456-7500560)
chr7 (323-428)||(7501847-7501952)
chr7 (323-428)||(47369782-47369887)
chr7 (323-399)||(11658380-11658456)
chr7 (323-414)||(31949323-31949414)
chr7 (325-428)||(42886281-42886384)
chr7 (324-414)||(17781663-17781753)
chr7 (323-428)||(21505417-21505520)
chr7 (323-417)||(34352792-34352886)
chr7 (323-414)||(127338-127427)
chr7 (323-414)||(47525376-47525467)
chr7 (323-425)||(48934901-48935003)
chr7 (327-428)||(14999150-14999249)
chr7 (325-425)||(11662549-11662649)
chr7 (325-412)||(128612-128699)
chr7 (323-414)||(3227109-3227199)
chr7 (323-394)||(20163585-20163656)
chr7 (329-396)||(47524532-47524599)
chr7 (323-396)||(34174010-34174082)
chr7 (323-380)||(14998009-14998067)
chr7 (323-417)||(31661015-31661109)
chr7 (336-414)||(48933681-48933759)
chr7 (323-428)||(769414-769519)
chr7 (323-374)||(21508453-21508502)
[»] scaffold0302 (2 HSPs)
scaffold0302 (323-425)||(17471-17573)
scaffold0302 (323-399)||(18800-18876)
[»] chr2 (40 HSPs)
chr2 (323-428)||(18904368-18904473)
chr2 (323-399)||(36449779-36449855)
chr2 (323-414)||(38840502-38840593)
chr2 (323-428)||(18299374-18299479)
chr2 (323-414)||(7899891-7899982)
chr2 (323-414)||(38839243-38839334)
chr2 (323-414)||(41879221-41879312)
chr2 (323-428)||(18797247-18797353)
chr2 (323-425)||(22848192-22848294)
chr2 (323-428)||(18905983-18906087)
chr2 (323-428)||(22587949-22588053)
chr2 (323-428)||(23869530-23869634)
chr2 (323-426)||(802588-802690)
chr2 (323-414)||(1034478-1034569)
chr2 (323-428)||(13030293-13030395)
chr2 (325-414)||(7898694-7898783)
chr2 (323-428)||(26545516-26545621)
chr2 (346-414)||(11258820-11258888)
chr2 (323-399)||(32739624-32739700)
chr2 (325-397)||(36450947-36451018)
chr2 (323-428)||(18300720-18300822)
chr2 (323-400)||(18868925-18869002)
chr2 (350-426)||(810778-810854)
chr2 (323-414)||(41878093-41878186)
chr2 (325-428)||(28617926-28618027)
chr2 (323-425)||(11938787-11938888)
chr2 (323-425)||(16446155-16446257)
chr2 (323-400)||(24476867-24476942)
chr2 (323-399)||(13570581-13570657)
chr2 (336-399)||(8534596-8534659)
chr2 (325-400)||(13567975-13568050)
chr2 (323-380)||(21837298-21837353)
chr2 (346-428)||(18869157-18869241)
chr2 (323-414)||(11257623-11257713)
chr2 (323-376)||(21837071-21837122)
chr2 (346-428)||(22587525-22587606)
chr2 (346-428)||(24475248-24475330)
chr2 (346-425)||(8535654-8535733)
chr2 (340-410)||(5819726-5819796)
chr2 (323-376)||(1033212-1033264)
[»] scaffold0019 (2 HSPs)
scaffold0019 (323-428)||(61454-61559)
scaffold0019 (323-428)||(60091-60196)
[»] scaffold0586 (2 HSPs)
scaffold0586 (325-428)||(6346-6449)
scaffold0586 (323-428)||(9022-9125)
[»] scaffold0294 (2 HSPs)
scaffold0294 (323-414)||(5447-5538)
scaffold0294 (323-398)||(4443-4518)
[»] chr6 (33 HSPs)
chr6 (325-428)||(1829598-1829701)
chr6 (323-414)||(16704506-16704597)
chr6 (323-428)||(7314881-7314985)
chr6 (323-414)||(14823584-14823676)
chr6 (323-428)||(7316289-7316394)
chr6 (337-428)||(6840207-6840298)
chr6 (323-414)||(8659266-8659357)
chr6 (323-414)||(8821874-8821965)
chr6 (323-414)||(14822361-14822452)
chr6 (346-425)||(26575052-26575131)
chr6 (323-414)||(8822802-8822893)
chr6 (323-425)||(10784593-10784696)
chr6 (323-414)||(27437829-27437920)
chr6 (323-414)||(3721613-3721704)
chr6 (323-414)||(8660213-8660303)
chr6 (335-425)||(10785911-10786001)
chr6 (323-428)||(12382706-12382811)
chr6 (323-424)||(27322067-27322167)
chr6 (325-425)||(5658759-5658859)
chr6 (341-428)||(17496816-17496904)
chr6 (323-398)||(6842308-6842383)
chr6 (323-397)||(3722533-3722607)
chr6 (323-397)||(27318316-27318389)
chr6 (324-380)||(26717127-26717183)
chr6 (346-425)||(26574643-26574721)
chr6 (342-428)||(26949180-26949263)
chr6 (323-374)||(27447962-27448013)
chr6 (325-414)||(34834588-34834677)
chr6 (323-418)||(16703571-16703663)
chr6 (323-425)||(3333024-3333126)
chr6 (323-399)||(1828740-1828816)
chr6 (347-423)||(12350823-12350898)
chr6 (323-425)||(30495695-30495796)
[»] scaffold0632 (1 HSPs)
scaffold0632 (323-425)||(3306-3407)
[»] scaffold2034 (2 HSPs)
scaffold2034 (323-426)||(234-337)
scaffold2034 (343-426)||(975-1058)
[»] scaffold1303 (1 HSPs)
scaffold1303 (323-428)||(1440-1545)
[»] scaffold0003 (2 HSPs)
scaffold0003 (323-414)||(49442-49533)
scaffold0003 (323-374)||(39345-39396)
[»] scaffold0321 (1 HSPs)
scaffold0321 (324-418)||(18730-18824)
[»] scaffold0049 (1 HSPs)
scaffold0049 (323-425)||(7413-7515)
[»] scaffold0045 (1 HSPs)
scaffold0045 (323-398)||(49109-49184)
[»] scaffold0093 (2 HSPs)
scaffold0093 (323-414)||(2474-2564)
scaffold0093 (323-414)||(7097-7187)
[»] scaffold0186 (2 HSPs)
scaffold0186 (323-414)||(23082-23171)
scaffold0186 (323-372)||(23941-23990)
[»] scaffold0059 (2 HSPs)
scaffold0059 (323-400)||(4753-4829)
scaffold0059 (346-414)||(3699-3767)
[»] scaffold0369 (1 HSPs)
scaffold0369 (323-426)||(13194-13295)
[»] scaffold0112 (1 HSPs)
scaffold0112 (323-414)||(37149-37239)
[»] scaffold0227 (1 HSPs)
scaffold0227 (323-375)||(167-219)


Alignment Details
Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 41124802 - 41124702
Alignment:
Q  16 aatttaacattaggtaggatttgattatatttggaattgaaacaatattgtaattaaataattgtgttcattaactaatttttcaataaccttattcagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41124802 aatttaacattaggtaggatttgattatatttggaattgaaacaatattgtaattaaataattgtgttcattaactaatttttcaataaccttattcagg 41124703  T
Q  116 a 116  Q
    |    
T  41124702 a 41124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 41124493 - 41124393
Alignment:
Q  16 aatttaacattaggtaggatttgattatatttggaattgaaacaatattgtaattaaataattgtgttcattaactaatttttcaataaccttattcagg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41124493 aatttaacattaggtaggatttgattatatttggaattgaaacaatattgtaattaaataattgtgttcattaactaatttttcaatagccttattcagg 41124394  T
Q  116 a 116  Q
    |    
T  41124393 a 41124393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 41124935 - 41124848
Alignment:
Q  221 aatgatcttaactaatattcatatatatgcgcgtgagtttatttaagaataaatttatcattttcaaaatacttgactttatttcccc 308  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41124935 aatgatcttaactaatattcatatatatgcgcgtgtgtttatttaagaataaatttatcattttcaaaatacttgactttatttcccc 41124848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 41124624 - 41124537
Alignment:
Q  221 aatgatcttaactaatattcatatatatgcgcgtgagtttatttaagaataaatttatcattttcaaaatacttgactttatttcccc 308  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41124624 aatgatcttaactaatattcatatatatgcgtgtgtgtttatttaagaataaatttatcattttcaaaatacttaactttatttcccc 41124537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 5513983 - 5514087
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||| ||||| ||| |||    
T  5513983 gctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagccccttt 5514081  T
Q  423 gcatct 428  Q
    ||||||    
T  5514082 gcatct 5514087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 10007863 - 10007758
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| | |||| |||||||||  ||||||||||||| ||| |||    
T  10007863 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagccccttt 10007764  T
Q  423 gcatct 428  Q
    ||||||    
T  10007763 gcatct 10007758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 30336601 - 30336496
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||| ||| | |||||||||||||||||||||| | || |||||||||| || ||||    
T  30336601 gctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccatttt 30336502  T
Q  423 gcatct 428  Q
    ||||||    
T  30336501 gcatct 30336496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 11282011 - 11282111
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||| ||  ||||||||  |||||||||| ||||||||||||||||| |||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  425 a 425  Q
    |    
T  11282111 a 11282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 1823553 - 1823656
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| |||  ||||||||||||||||||||| |  ||||||||||||| ||| |||    
T  1823553 gctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccattt 1823652  T
Q  423 gcat 426  Q
    ||||    
T  1823653 gcat 1823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 1857998 - 1858101
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| |||  ||||||||||||||||||||| |  ||||||||||||| ||| |||    
T  1857998 gctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccattt 1858097  T
Q  423 gcat 426  Q
    ||||    
T  1858098 gcat 1858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 12351922 - 12352013
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||| |||  ||||||||||||||||||| || |||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  12351922 gctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagattta 12352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 41124716 - 41124657
Alignment:
Q  130 taaccttattcaggaatttcaaccaactaactaattagtcaaaaaacttaactaatataa 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41124716 taaccttattcaggaatttcaaccaactaactaattagtcaaaaaacttaactaatataa 41124657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 428
Target Start/End: Complemental strand, 1824167 - 1824073
Alignment:
Q  335 tttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  1824167 tttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatct 1824073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 428
Target Start/End: Complemental strand, 1858612 - 1858518
Alignment:
Q  335 tttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  1858612 tttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatct 1858518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 10006345 - 10006450
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||  ||||||||||||| ||| |||    
T  10006345 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagccccttt 10006444  T
Q  423 gcatct 428  Q
    ||||||    
T  10006445 gcatct 10006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 18970924 - 18971013
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    ||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  18970924 ttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgca 18971013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 22221464 - 22221359
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| |||||||| |||| ||||||  |||||||||||||||| ||||||||||||| ||| |||    
T  22221464 gctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagccccttt 22221365  T
Q  423 gcatct 428  Q
     |||||    
T  22221364 acatct 22221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 22227806 - 22227701
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| |||||||| |||| ||||||  |||||||||||||||| ||||||||||||| ||| |||    
T  22227806 gctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagccccttt 22227707  T
Q  423 gcatct 428  Q
     |||||    
T  22227706 acatct 22227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 29968434 - 29968346
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||    
T  29968434 taaagtgcactttt-cccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagattta 29968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 12353459 - 12353370
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||  |||||||||||||    
T  12353459 gctaaagtgcactttt-cccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagattta 12353370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 8389787 - 8389694
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc 418  Q
    |||||||||||||| ||| ||||| ||||||||| || ||||||||| |||||| |||||||||||||||||||   |||||||||||||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaaccc 8389694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 18978033 - 18978122
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    ||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||  ||| ||||||||| ||| ||||||    
T  18978033 ttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgca 18978122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 30335640 - 30335745
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| | ||||||||||| |||||||| |||||||||| |  |||||||||||| ||||||||| | ||||||||||||| ||| |||    
T  30335640 gctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagccccttt 30335739  T
Q  423 gcatct 428  Q
    ||||||    
T  30335740 gcatct 30335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 11287779 - 11287879
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||  |||||||| ||||||||||||||  ||||||||| ||||| | |||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T
Q  425 a 425  Q
    |    
T  11287879 a 11287879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 43661267 - 43661371
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    |||||||||||||||   ||||||| ||| ||||| |||||||||||| |||||| |||||||||||| |||||||  ||||||||||||| ||| ||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  424 catct 428  Q
    |||||    
T  43661367 catct 43661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 18979220 - 18979118
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||| |||||||||| ||||| ||||||||||||| ||| || ||||||||||||||||  ||| || |||||| ||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  423 gca 425  Q
    |||    
T  18979120 gca 18979118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 22220389 - 22220494
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||| ||| |||| |||||||| |||| || ||| ||||||||||||||||  ||||||||||||| ||| |||    
T  22220389 gctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccattt 22220488  T
Q  423 gcatct 428  Q
    ||||||    
T  22220489 gcatct 22220494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 30568888 - 30568992
Alignment:
Q  323 gctaaagtgcactttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    |||||||||||||||  |||||| ||| ||||||||| |||||||||||  | |||| |||||||||||| |||||||| ||||||||||||| ||| ||    
T  30568888 gctaaagtgcacttt--ccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctt 30568985  T
Q  422 tgcatct 428  Q
    |||||||    
T  30568986 tgcatct 30568992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 24123983 - 24123893
Alignment:
Q  338 ttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| |||| |||||||||   | ||||||||||| ||| |||||||||    
T  24123983 ttcccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatct 24123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 40471244 - 40471153
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacc 417  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||  || ||| ||||||||||||||||||   ||| ||||||||||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttgg-tccataaatacaaaaactacaattttagccccttaagatttaacc 40471153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 24122884 - 24122974
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||| |||||||||| ||||||| ||||| || |||||||| |||| ||||||||||||||| ||||||   |||||||||||||    
T  24122884 gctaaagtgca-tttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagattta 24122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 424
Target Start/End: Original strand, 8388465 - 8388564
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  ||||| ||||||| ||||| || ||||||| ||||| || |||||||||||| |||||||  ||||||||||||| ||| |||    
T  8388465 gctaaagtgcacttt--cccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagccccttt 8388562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 32207423 - 32207320
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  ||||| |||| ||||||||||| |||||||| | || |||||||||||||||||||||||  | | ||||||||| ||  |||    
T  32207423 gctaaagtgcacttt--cccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctcttt 32207326  T
Q  423 gcatct 428  Q
    ||||||    
T  32207325 gcatct 32207320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 41125008 - 41124969
Alignment:
Q  150 aaccaactaactaattagtcaaaaaacttaactaatataa 189  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41125008 aaccaactaactaattagtcaaaaaacttaactaatataa 41124969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 30570353 - 30570251
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||| ||||||||  ||| ||| ||||| || ||||||||  || ||| ||||||||| || |||||||  ||||||||||||| |||||||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatcc-ttatgtacaaaaattagaattttggccccctaagatttagcccttttgc 30570255  T
Q  425 atct 428  Q
    ||||    
T  30570254 atct 30570251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 11283309 - 11283207
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||  ||||||||||||||||||| ||  |||||| ||||| || ||| |||||  |||||||||  ||||||| ||||| ||| |||    
T  11283309 gctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagccccttt 11283210  T
Q  423 gca 425  Q
    |||    
T  11283209 gca 11283207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 11288960 - 11288914
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaatttt 369  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  11288960 gctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 373
Target Start/End: Original strand, 36249553 - 36249603
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcc 373  Q
    |||||||||||||||| ||||||||| ||||||||| || |||||||||||    
T  36249553 gctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcc 36249603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 43661919 - 43661833
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattt 413  Q
    |||||||||||| | ||||||||||||||||| || |||||||   ||  || |||||||||||| |||||||  ||||||||||||    
T  43661919 aagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagattt 43661833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 45114612 - 45114523
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacc 417  Q
    |||||||||||| | ||| |||||||||||||||| |||||||||  |  || ||||| ||||||||||||||  || |||||||||||||    
T  45114612 aagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttg-gcctctaagatttaacc 45114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 5514369 - 5514266
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||  ||||| || ||| |||||||| ||||||| |||   ||| ||||||||||||||||||| ||| |||| ||||| ||| |||    
T  5514369 gctaaagtgcacttttatcccct-aattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg-acctctaaaatttagcccattt 5514272  T
Q  423 gcatct 428  Q
    ||||||    
T  5514271 gcatct 5514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 24359810 - 24359913
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||| ||||||||| || |||||| ||||| || | ||||| ||| ||  | |||||||||||||||||||| ||||||||||||| ||  |||    
T  24359810 gctaaagtgctctttttccctct-aacttttaaaaagttgcgatttttgcctctata-tacaaaaactacaattttgaccccctaagatttagcctattt 24359907  T
Q  423 gcatct 428  Q
    ||||||    
T  24359908 gcatct 24359913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 24483144 - 24483196
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||| | ||| |||||||||||| |||||||||||||    
T  24483144 gctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 29043400 - 29043504
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    ||||||| ||||||| | |||||||| |||||||| |  | |||||| |||| || |||||||||||||||||||   || |||||||||| ||| ||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttg 29043499  T
Q  424 catct 428  Q
     ||||    
T  29043500 tatct 29043504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 32974036 - 32973984
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||||||||| ||||||||||||  || | |||||||||||    
T  32974036 gctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggcccc 32973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 24488762 - 24488703
Alignment:
Q  340 cccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||||    
T  24488762 cccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 23170097 - 23170034
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaa 388  Q
    |||||||||||  ||||||||| ||| |||||||||||| ||||||||  ||| ||||||||||||    
T  23170097 gctaaagtgca--ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 3819490 - 3819542
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccct 376  Q
    ||||||||||| |||||||||||||| ||||||||  || ||||||||||||||    
T  3819490 gctaaagtgca-tttttcccccttaagtttcaaaatgttgcaattttggcccct 3819542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 1824221 - 1824185
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaac 359  Q
    |||||||||||||||||||||  ||||||||||||||    
T  1824221 gctaaagtgcactttttcccctctaactttcaaaaac 1824185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 1858666 - 1858630
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaac 359  Q
    |||||||||||||||||||||  ||||||||||||||    
T  1858666 gctaaagtgcactttttcccctctaactttcaaaaac 1858630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 11456639 - 11456691
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    ||||||||||||||||  |||| ||| ||||||||| || |||||||||||||    
T  11456639 gctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccc 11456691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 32968457 - 32968509
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  32968457 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 32968509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 36336845 - 36336893
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||| ||||  ||||||||||||||||    
T  36336845 aagtgcactttttccctcttaaattttaaaaggttacaattttggcccc 36336893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 38974796 - 38974848
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  38974796 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 38974848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 38980144 - 38980092
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  38980144 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 38980092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 39005894 - 39005946
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  39005894 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 39005946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 39011241 - 39011189
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  39011241 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 39011189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 11437299 - 11437194
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  11437299 gctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccctttt 11437200  T
Q  423 gcatct 428  Q
     |||||    
T  11437199 acatct 11437194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 39153214 - 39153111
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  425 atct 428  Q
    ||||    
T  39153114 atct 39153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 45148582 - 45148686
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||| |||    
T  45148582 gctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaaccccttt 45148680  T
Q  423 gcatct 428  Q
    ||||||    
T  45148681 gcatct 45148686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 11436043 - 11436148
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||  ||||||||||||||||| |||    
T  11436043 gctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccattt 11436142  T
Q  423 gcatct 428  Q
    ||||||    
T  11436143 gcatct 11436148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 24422801 - 24422892
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  24422801 gctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagattta 24422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 52274969 - 52275060
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  52274969 gctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagattta 52275060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 51684367 - 51684472
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||||||||||| ||||| || ||||||||||||| || ||| ||||||||||||||||  ||||||||||||| ||| |||    
T  51684367 gctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagccccttt 51684466  T
Q  423 gcatct 428  Q
    ||||||    
T  51684467 gcatct 51684472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 45150068 - 45149965
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg-aacccctaagatttaacccttttg 423  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||   ||||||||||||| ||| ||||    
T  45150068 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttg 45149970  T
Q  424 catct 428  Q
    |||||    
T  45149969 catct 45149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 39151934 - 39152037
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| |||||||||||||| ||||||||||||  |||||||||||| || |||||||||||||||||||||  |  ||||||||||||| |||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgc 39152033  T
Q  425 atct 428  Q
    ||||    
T  39152034 atct 39152037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 50680335 - 50680437
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||| ||||||   ||||||||||||||||| |||||    
T  50680335 taaagtgca-tttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgc 50680433  T
Q  425 atct 428  Q
    ||||    
T  50680434 atct 50680437  T

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Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 45157308 - 45157204
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  |||||| || |||||||||||| ||||||||||||| || ||||||||||||||||||||| ||  ||||||||||||| |||    
T  45157308 gctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccccttt 45157210  T
Q  423 gcatct 428  Q
    ||||||    
T  45157209 gcatct 45157204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 51685865 - 51685760
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||||||||| || | ||||||||||  || ||||||||||||||||||||| ||||||||||||| ||| |||    
T  51685865 gctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagccccttt 51685766  T
Q  423 gcatct 428  Q
    ||||||    
T  51685765 gcatct 51685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 36614004 - 36613913
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||| |||| | ||| ||||||| ||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  36614004 gctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagattta 36613913  T

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Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 24426173 - 24426084
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||  ||||  |||||||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagattta 24426084  T

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Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 36612854 - 36612958
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| ||||||||||||||||||| || |||||||||  | ||||||||||||||||||||||| | |||||||||||||  || |||    
T  36612854 gctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatc-ttaagtacaaaaactacaattttaaccccctaagatttagtcccttt 36612952  T
Q  423 gcatct 428  Q
    ||||||    
T  36612953 gcatct 36612958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 23980566 - 23980463
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||| |||||||| |||||||||| || ||||||||||||||| |||||||  | ||||||||||| ||| |||    
T  23980566 gctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagccccttt 23980467  T
Q  423 gcat 426  Q
    ||||    
T  23980466 gcat 23980463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 39699866 - 39699776
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||| ||||||||| ||||| |||||||| |||| |||||||| ||||||||||||||  |||||||||||||    
T  39699866 gctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagattta 39699776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 43378810 - 43378708
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||| | | |||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||| | ||||||||||| | | |||||    
T  43378810 taaagtgcactttt-ctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgc 43378712  T
Q  425 atct 428  Q
    ||||    
T  43378711 atct 43378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 33088717 - 33088615
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| || |  |||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||   |||||||||||| ||| |||    
T  33088717 gctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagccccttt 33088618  T
Q  423 gca 425  Q
    |||    
T  33088617 gca 33088615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 35067102 - 35067000
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||||||| ||||||||| || | ||||||||||| || | ||||||||||||||||||  ||||||| ||||| ||| |||    
T  35067102 gctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagccccttt 35067003  T
Q  423 gca 425  Q
    |||    
T  35067002 gca 35067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 39222574 - 39222468
Alignment:
Q  323 gctaaagtgcactttttccccctt-aactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||| ||   || |||||||||  ||| ||    
T  39222574 gctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccatt 39222475  T
Q  422 tgcatct 428  Q
    |||||||    
T  39222474 tgcatct 39222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 14999286 - 14999362
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    ||||||||| |||||| |||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  14999286 gctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttga 14999362  T

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Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 35594218 - 35594321
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| |||||||| |||| ||||||  ||||||||||||||| |||||||| ||||| ||| |||    
T  35594218 gctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccc-taagtattaaaactacaattttg-acccctaaaatttagccccttt 35594315  T
Q  423 gcatct 428  Q
    ||||||    
T  35594316 gcatct 35594321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 43060106 - 43060001
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||  ||||  ||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||| ||| ||||||||| | | |||    
T  43060106 gctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcattt 43060007  T
Q  423 gcatct 428  Q
    ||||||    
T  43060006 gcatct 43060001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 44404443 - 44404548
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||| ||||||||||||| | |||||||||||||||  ||||||| ||||| ||||||||||||||| |||||||  ||||||| ||||| ||  |||    
T  44404443 gctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaattt 44404542  T
Q  423 gcatct 428  Q
    ||||||    
T  44404543 gcatct 44404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 39698564 - 39698640
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||||||| |||||||| |||||| |||||||    
T  39698564 gctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttg 39698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 37526975 - 37526873
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||||| || ||| || | |||| |||||||||  ||||||||||||| ||| |||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttg-gcccctaagatttagcccctttgc 37526877  T
Q  425 atct 428  Q
    ||||    
T  37526876 atct 37526873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 43058789 - 43058891
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||| |||| ||||||||||||||||||||||   || |||||||||| ||| ||| |    
T  43058789 taaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttac 43058887  T
Q  425 atct 428  Q
    ||||    
T  43058888 atct 43058891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 52827348 - 52827439
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||| |||| ||||||| ||||| |||||||    |||||||||||||    
T  52827348 gctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagattta 52827439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 45156052 - 45156144
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacc 417  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||||| ||   || ||||||||||||||||||| | || |||||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacc 45156144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 7675537 - 7675454
Alignment:
Q  345 ttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||||||| |||||||| || | |||||| ||||| || |||||||| ||||||||||||| ||| |||||||||    
T  7675537 ttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgcatct 7675454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 41364830 - 41364920
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| ||| ||| ||||| ||||||| |  |||||||||||||    
T  41364830 gctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagattta 41364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 7674529 - 7674604
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    |||||||||| ||||| |||||| |||||| |||||||| ||||||||| |||| |||||||||||||||||||||||    
T  7674529 gctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggccct-aagtacaaaaactacaattttga 7674604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 46066547 - 46066631
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatctctg 431  Q
    ||||||||||||| || | ||||| |||||||| ||||||||||||||||||| | ||||||||||||| ||  ||||||||||||    
T  46066547 taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaatttt-agcccctaagatttagccaatttgcatctctg 46066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 52828168 - 52828079
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| ||||  ||| |||||||||||| |||||||||| || ||||||| ||||| ||||||| |  |||||||||||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagattta 52828079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 41366230 - 41366140
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||| | |||||||||||||| | ||||||| ||||||||||||  ||||| ||||||| |  |||||||||||||    
T  41366230 gctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttag-ccccctaagattta 41366140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 7983053 - 7983141
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| | ||| |||||||||| ||||| ||||||||||||| || |||  ||||| |||||||||  |||||||||||||    
T  7983053 taaagtgcactttt-ctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagattta 7983141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 25652716 - 25652820
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||| ||||||  || || |||||||||||| ||||||||  |||||||||||||||| || || ||||  || |||||||||| ||| |||    
T  25652716 gctaaagtgcaccttttccttct-aattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccattt 25652814  T
Q  423 gcatct 428  Q
    ||||||    
T  25652815 gcatct 25652820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 415
Target Start/End: Original strand, 11190386 - 11190478
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaa 415  Q
    ||||||||||||||||  |||||||| ||| ||||| || |||||||||  || ||  |||||||||| ||||||||| || |||||||||||    
T  11190386 gctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttgatcctctaagatttaa 11190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 395
Target Start/End: Complemental strand, 15000055 - 14999983
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaat 395  Q
    |||||||| |||||||||| || ||||||| |||||||| ||||||||  ||| ||||||||||| |||||||    
T  15000055 gctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 398
Target Start/End: Original strand, 16290094 - 16290170
Alignment:
Q  323 gctaaagtgcactttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    ||||||||||| ||||||||| | |||| |||||||| || ||||||||| |||||| ||| |||||||||||||||    
T  16290094 gctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 40384727 - 40384831
Alignment:
Q  325 taaagtgcactttttccccctt-aactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    ||||||||||||||| || ||| || ||||||||| || ||||||| | | | || ||||||||||||||||||||| ||||||| ||||| ||  ||||    
T  40384727 taaagtgcacttttttcctctttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttg 40384826  T
Q  424 catct 428  Q
    |||||    
T  40384827 catct 40384831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 395
Target Start/End: Complemental strand, 50681704 - 50681632
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaat 395  Q
    |||||||||||||||| ||| ||||| |||||||||||| |||||||||| |  ||| || ||||||||||||    
T  50681704 gctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaat 50681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 35595293 - 35595187
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaactta-caattttggccccttaagtacaaaaacta-caattttgaacccctaagatttaaccctt 420  Q
    ||||||||| |||||| ||||  ||||||| ||||||||| |||||||| |||| || ||| |||||||| ||||||||  ||||||||||||| ||| |    
T  35595293 gctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttgg-cccctaagatttagcccct 35595195  T
Q  421 ttgcatct 428  Q
    ||||||||    
T  35595194 ttgcatct 35595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 30249588 - 30249499
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||| || || || ||||||||||||| ||  |||||||  |  ||| ||||||||||||||||||||| ||| |||||||||    
T  30249588 taaagtgcactcttccctccgtaactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagattta 30249499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 52276261 - 52276172
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||  |||   ||||||||||||| ||  |||||||||||| ||||||||||||||| || |||   |||||||||||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagattta 52276172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 12390081 - 12389980
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| || |||||||||||||||| || | ||||||  ||| || ||||||||| || |||||||  ||||| ||||||| ||| |||    
T  12390081 gctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagccccttt 12389983  T
Q  423 gca 425  Q
    |||    
T  12389982 gca 12389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 7987952 - 7987905
Alignment:
Q  326 aaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  7987952 aaagtgca-tttttccccct-aactttcaaaaatttacaattttggcccc 7987905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 24332916 - 24333019
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  425 atct 428  Q
    ||||    
T  24333016 atct 24333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 25523070 - 25523175
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||| |||    
T  25523070 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagccccttt 25523169  T
Q  423 gcatct 428  Q
    ||||||    
T  25523170 gcatct 25523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 22940722 - 22940618
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||| ||||| ||| |||    
T  22940722 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttg-acccctaaaatttagccccttt 22940624  T
Q  423 gcatct 428  Q
     |||||    
T  22940623 tcatct 22940618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 28538677 - 28538779
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||||||||||||| ||| |||    
T  28538677 gctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagccccttt 28538776  T
Q  423 gca 425  Q
    |||    
T  28538777 gca 28538779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 18487002 - 18486897
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||| | |||| |||||||||  ||||||||||||| ||| |||    
T  18487002 gctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagccccttt 18486903  T
Q  423 gcatct 428  Q
    ||||||    
T  18486902 gcatct 18486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 19752913 - 19753017
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||| |||||| |||  ||    
T  19752913 gctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 19753011  T
Q  423 gcatct 428  Q
    ||||||    
T  19753012 gcatct 19753017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 36486584 - 36486497
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||||| ||||||| |||||||| |||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  36486584 aagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagattta 36486497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 425
Target Start/End: Original strand, 36485302 - 36485403
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    |||||||||| |||| | ||| ||||||| ||||||||||||||||| || ||||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  424 ca 425  Q
    ||    
T  36485402 ca 36485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 18154495 - 18154570
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  18154495 gctaaagtgaacttttttccccttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaattttg 18154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 33160386 - 33160295
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||| ||| |||||||||    
T  33160386 gctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagattta 33160295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 1796055 - 1796157
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| | ||| |||||||||||||||| ||| ||||||| | |||||||||||||||||||||||| |||| |||| ||||||| |||    
T  1796055 gctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccattt 1796154  T
Q  423 gca 425  Q
    |||    
T  1796155 gca 1796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 19754231 - 19754125
Alignment:
Q  323 gctaaagtgcacttttt-cccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    ||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||  |||||| |||||| |||  |    
T  19754231 gctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagccccat 19754132  T
Q  422 tgcatct 428  Q
    |||||||    
T  19754131 tgcatct 19754125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 16650955 - 16650850
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||   |||||||| |||| ||| |||    
T  16650955 gctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccattt 16650856  T
Q  423 gcatct 428  Q
    ||||||    
T  16650855 gcatct 16650850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 412
Target Start/End: Original strand, 33158099 - 33158188
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatt 412  Q
    ||||||||||| ||||| |||| |||||||||||||||| |||||||| | || |||||||||||||||||||||||| ||| |||||||    
T  33158099 gctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 25056481 - 25056390
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| | | | |||||||||||||||| |||||||| |||| ||||||  |||||||||||||||| |||||||||||||    
T  25056481 gctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagattta 25056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 40255772 - 40255677
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc 418  Q
    |||||||||||||||| ||| ||||| ||| |||||||| |||||||| |||| ||| |||| ||||||||||||||  |||||||||||||||||    
T  40255772 gctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccc 40255677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 28539917 - 28539829
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||| |||||||||| ||||||| |||||||| |||||||| |||  |||||||||||||||||||||||  |||||||||||||    
T  28539917 taaagtgca-tttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagattta 28539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 5778936 - 5778845
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  5778936 gctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagattta 5778845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 42195137 - 42195238
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||| ||||||||||||| ||||| || | ||||||||||| || |||||||| |||||||||||  ||||||||||||| ||| |||||    
T  42195137 taaagtgcactttt-cccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T
Q  425 atct 428  Q
    ||||    
T  42195235 atct 42195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 5777902 - 5777991
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||  ||||| |||||||||||||||| |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||||    
T  5777902 gctaaagtgcacttt--cccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattta 5777991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 18485139 - 18485215
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||||||||  ||||||| |||||||| ||||||||||||| ||||||  ||||| |||||||||    
T  18485139 gctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttg 18485215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 20214197 - 20214272
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| || |  || ||||||||||||||||||||    
T  20214197 gctaaagtgcactttt-cccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttg 20214272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 20216861 - 20216761
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||| || || ||  |||||||||||||||||||  |||| |||| ||| ||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T
Q  425 a 425  Q
    |    
T  20216761 a 20216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 25524160 - 25524093
Alignment:
Q  361 tacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||| | ||||||||||||||| |||||||| ||||||||||||| ||| |||||||||    
T  25524160 tacaattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatct 25524093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 21835083 - 21835143
Alignment:
Q  365 attttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||||| |||| || ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  21835083 attttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctttgca 21835143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 2186774 - 2186876
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| ||||||||||| || ||||||||| || ||||||||| |   || ||||||||||||||||||| | ||||||||||||| || |||| |    
T  2186774 taaagtgcattttttccccct-aagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttac 2186872  T
Q  425 atct 428  Q
    ||||    
T  2186873 atct 2186876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 5730442 - 5730517
Alignment:
Q  323 gctaaagtgcactttttcccc-cttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||  | ||||||| ||||| |||||||    
T  5730442 gctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 5730934 - 5730867
Alignment:
Q  351 ttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc 418  Q
    ||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccc 5730867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 16650047 - 16650098
Alignment:
Q  377 taagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  16650047 taagtacaaaaactacaattttgaccctctaagatttaacccctttgcatct 16650098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 7311608 - 7311682
Alignment:
Q  340 cccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||| |||||||||||||||| |||| |||||| |  |||||||||||||||||||||   |||||||||||||    
T  7311608 cccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagattta 7311682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 2685763 - 2685820
Alignment:
Q  341 ccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    |||| ||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  2685763 ccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 25055413 - 25055518
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||| ||   ||| ||||||||  ||| || ||| ||||||||||||||||  ||||||||||||| ||| |||    
T  25055413 gctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccattt 25055512  T
Q  423 gcatct 428  Q
    ||||||    
T  25055513 gcatct 25055518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 25524228 - 25524151
Alignment:
Q  323 gctaaagtgcactttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| |||||  ||| ||| ||||| ||  |||||||||||| |||||||||||||||||||||||    
T  25524228 gctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 25524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 1015492 - 1015572
Alignment:
Q  330 tgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaaga 410  Q
    ||||||||| | ||| ||||||| ||||| |||||||||||||||| |  |||||||| |||||||||| | |||||||||    
T  1015492 tgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaaga 1015572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 1797385 - 1797295
Alignment:
Q  335 tttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    ||||| ||| |||| ||| |||||||| |||||||||| |||||   ||||||||||||||||||  ||| ||||||||| ||| ||||||    
T  1797385 ttttttccctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctttgca 1797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 396
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaatt 396  Q
    |||||||||||||||| |||||||||| || || |||||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 398
Target Start/End: Original strand, 38834090 - 38834162
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    ||||||||| ||||| |||||||||||| ||||| || | ||||| | |||||| |||||||||||||||||||    
T  38834090 taaagtgcatttttttccccttaacttttaaaaagttgcgatttt-gacccttatgtacaaaaactacaatttt 38834162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 42196300 - 42196195
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  ||||| ||||||| ||||| ||   | ||||||||  || |||||||||||||| ||||   ||||||||||||| ||| |||    
T  42196300 gctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccattt 42196201  T
Q  423 gcatct 428  Q
    ||||||    
T  42196200 gcatct 42196195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 2686478 - 2686410
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||| |||||||| ||||||||  | ||||||||||||||||| |||||||  |||||| ||||||    
T  2686478 taacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgattta 2686410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 5962670 - 5962597
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    ||||||||||||||||||| |  | ||||||||||| ||  |||||||| ||| ||||||||||||||| ||||||    
T  5962670 gctaaagtgcactttttccac--tgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataatttt 5962597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 54540890 - 54540788
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||| |||    
T  54540890 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagccccttt 54540791  T
Q  423 gca 425  Q
    |||    
T  54540790 gca 54540788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 7758403 - 7758508
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||   ||||||||||||||||| |||    
T  7758403 gctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaaccccttt 7758502  T
Q  423 gcatct 428  Q
    | ||||    
T  7758503 gtatct 7758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 19984850 - 19984955
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||| ||| |||||||||||| ||||||||||||| || ||||||||||||||||||||| ||  ||||||||||||| |||    
T  19984850 gctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccccttt 19984949  T
Q  423 gcatct 428  Q
    ||||||    
T  19984950 gcatct 19984955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 29931227 - 29931329
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||  ||||||||||||||||| |||    
T  29931227 gctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaaccccttt 29931326  T
Q  423 gca 425  Q
    |||    
T  29931327 gca 29931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 29980381 - 29980483
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||  ||||||||||||||||| |||    
T  29980381 gctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaaccccttt 29980480  T
Q  423 gca 425  Q
    |||    
T  29980481 gca 29980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 7267647 - 7267735
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||  |||||||||||||    
T  7267647 taaagtgcactttt-cccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagattta 7267735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 12700176 - 12700265
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  12700176 gctaaagtgcacttt--cccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgattta 12700265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 19986172 - 19986065
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccct--taagtacaaaaactacaattttgaacccctaagatttaaccctt 420  Q
    |||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||  || ||| ||||||||||||||||| || |||||||||||||| |    
T  19986172 gctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacccct 19986073  T
Q  421 ttgcatct 428  Q
    ||||||||    
T  19986072 ttgcatct 19986065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 29932798 - 29932708
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  29932798 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagattta 29932708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 29981952 - 29981862
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  29981952 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagattta 29981862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 54539756 - 54539847
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||  |||| ||| |||||||||||||||||||| |||||||||||||    
T  54539756 gctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagattta 54539847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 47614186 - 47614291
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||  ||||||||||||| ||  |||    
T  47614186 gctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctcttt 47614285  T
Q  423 gcatct 428  Q
    ||||||    
T  47614286 gcatct 47614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 8456479 - 8456569
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||| ||| ||| |||||||||||||||||||  |||||||||||||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagattta 8456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 23770505 - 23770402
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| ||||  |||||||| ||| ||||| |||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||| |||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T
Q  425 atct 428  Q
    ||||    
T  23770405 atct 23770402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 534500 - 534605
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||||  ||||| |||||||||| |||||||| || | || ||||||||||||||||||||  ||||||||||||| ||  |||    
T  534500 gctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctattt 534599  T
Q  423 gcatct 428  Q
    ||||||    
T  534600 gcatct 534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 12703599 - 12703495
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||| || |||||||||||| ||  |||||||||||| |||||||||||||||||||||||  |||||| |||||| |||  ||    
T  12703599 gctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 12703501  T
Q  423 gcatct 428  Q
    ||||||    
T  12703500 gcatct 12703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 24516464 - 24516552
Alignment:
Q  326 aaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||| || |||||| ||||||||||||||||  ||| |||||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagattta 24516552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 22776912 - 22776809
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| ||||||||| ||| || ||||||||||||| || ||||||||||||||||||||  ||||||||| ||| ||| |||    
T  22776912 gctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagccccttt 22776813  T
Q  423 gcat 426  Q
    ||||    
T  22776812 gcat 22776809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 31645000 - 31645079
Alignment:
Q  349 ctttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| | | ||||||||||| ||| |||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatct 31645079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 55192083 - 55191993
Alignment:
Q  335 tttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||| |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||  |||  |||| ||||||| ||||||    
T  55192083 ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgca 55191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 11671440 - 11671336
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||| ||| || ||||||||||  ||||| |||||| |||||||||| |||    
T  11671440 gctaaagtgcactttttccgcct-aactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaaccccttt 11671342  T
Q  423 gcatct 428  Q
     |||||    
T  11671341 acatct 11671336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 47610678 - 47610589
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 47610589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 419
Target Start/End: Complemental strand, 535882 - 535786
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccct 419  Q
    ||||||||| |||||| | ||| |||||||||||||||| ||||||||| ||||||||||  ||||||| |||||| | ||||||||||||| ||||    
T  535882 gctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccct 535786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 7268924 - 7268836
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||| | |||||| | ||||||||||||||  | |||||||||||    
T  7268924 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagattta 7268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 47615648 - 47615591
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaag 380  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  47615648 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 414
Target Start/End: Original strand, 6170281 - 6170362
Alignment:
Q  331 gcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||| ||| |||||||||||||||| ||||||||  |||||||||||||||| |||||||||  |||| |||||||||    
T  6170281 gcactttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt--acccttaagattta 6170362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 34019232 - 34019140
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    |||| ||||||||||||||||||||| |||||||| |||| || ||||||| ||||||||||||  ||||||| ||||| | | |||||||||    
T  34019232 tttttccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatct 34019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 8875907 - 8875998
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||  |||||||| ||  |||||  | ||||||| |||||||| ||||||||||||||||||||  |||||||||||||    
T  8875907 gctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagattta 8875998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 46719942 - 46720045
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| ||||||||||||| ||||| || | ||||||||||| || ||| |||||||||||||||   || |||||||||| ||| |||    
T  46719942 gctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccattt 46720041  T
Q  423 gcat 426  Q
    ||||    
T  46720042 gcat 46720045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 47609698 - 47609789
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||| ||||||||| ||||| |||||||||||||||| |||||||| |||| ||||||| ||||| |||||||    |||||||||||||    
T  47609698 gctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagattta 47609789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 51469973 - 51470064
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| || || ||| |||||||||||| ||||||||||||| ||||||| ||||| |||||||    |||||||||||||    
T  51469973 gctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagattta 51470064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 51038890 - 51038814
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| | ||||||||||| ||||| || |||||||| |||| || | ||||||||||||||||||    
T  51038890 gctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttg 51038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 6249618 - 6249685
Alignment:
Q  331 gcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    ||||||||||  || |||||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  6249618 gcactttttcatccataactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt 6249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 46721320 - 46721217
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||  |||| ||||||| ||||| || | |||||  |||| || |||||||||||||||||||   ||||||||||||| ||| |||    
T  46721320 gctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagccccttt 46721221  T
Q  423 gcat 426  Q
    ||||    
T  46721220 gcat 46721217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 51470554 - 51470464
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||| || |||||| ||||||||||||||| |||||| |  ||| ||||||| ||||| ||||||| | ||||||||||||||    
T  51470554 gctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagattta 51470464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 52840704 - 52840613
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||| ||||| | ||| |||||||||||||||| |||||||||| || ||| ||  ||||| |||||||||  |||||||||||||    
T  52840704 gctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagattta 52840613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 5001201 - 5001275
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| | ||| || ||||||||| ||| ||||||||||||| ||||||| ||||| |||||||    
T  5001201 gctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 40426877 - 40426787
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttac-aattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| ||||||||||||| ||||| || | ||||| |||||||||  |||||||| ||||||||||  |||||| ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgattta 40426787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 51037537 - 51037638
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||||||||||||||||| || |||||||| |||  || | |||||||||||||||||   ||||||||| ||| ||| |||    
T  51037537 gctaaagtgcactttt-ctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagccccttt 51037635  T
Q  423 gca 425  Q
    |||    
T  51037636 gca 51037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 49216248 - 49216353
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | | | ||| ||||||||| || |||||||| |||| || ||||||||||||||||| ||  ||| ||||||||| | | |||    
T  49216248 gctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcattt 49216347  T
Q  423 gcatct 428  Q
    ||||||    
T  49216348 gcatct 49216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 51347271 - 51347371
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||  ||| ||||| ||| ||||| || ||||||||| ||  || | |||||||  |||||||||| ||||||||||||||||| |||||    
T  51347271 taaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgc 51347370  T
Q  425 a 425  Q
    |    
T  51347371 a 51347371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 53614820 - 53614896
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| | ||  ||  || ||||||||||||||||    
T  53614820 gctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttg 53614896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 5029782 - 5029708
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    |||||||||||||||| |||||| | ||||||||| ||| ||||||||||| | ||||||| ||||| ||||||||    
T  5029782 gctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 53901486 - 53901403
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaa 408  Q
    |||||||||||||||| ||||  ||| ||| ||||| || |||||||| | |||||||||||||||||||||| |||  |||||||    
T  53901486 gctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaa 53901403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 23769862 - 23769947
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattt 413  Q
    |||||||||||| | |||||||||||||| || || |||||||   ||  || || ||||||||||||||||| |||||||||||||    
T  23769862 aagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttg-acccctaagattt 23769947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 428
Target Start/End: Original strand, 52104494 - 52104583
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    |||||||||| |||||||||||| ||  |||||||| ||  || |||||||||||| |||||||  | ||||||||||||| | |||||||||    
T  52104494 ttttccccct-aactttcaaaaagttgtaattttggtcc--tatgtacaaaaactataattttggccacctaagatttaactcatttgcatct 52104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 39843054 - 39843098
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaatttt 369  Q
    |||||||||||||||||||||||| ||| ||||| || |||||||    
T  39843054 taaagtgcactttttcccccttaagtttgaaaaagttgcaatttt 39843098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 53616114 - 53616042
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||| | ||||||||||| ||| ||||  ||||||    ||||| ||||||||||||||||||    
T  53616114 taaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaattt 53616042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 12129626 - 12129729
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  425 atct 428  Q
    ||||    
T  12129726 atct 12129729  T

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Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 1290298 - 1290193
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||   ||||||||||||||||| |||    
T  1290298 gctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaaccccttt 1290199  T
Q  423 gcatct 428  Q
    ||||||    
T  1290198 gcatct 1290193  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 8757676 - 8757766
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||| |||||||||    
T  8757676 gctaaagtgcactttttcccc-ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagattta 8757766  T

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Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 327 - 425
Target Start/End: Original strand, 31599794 - 31599892
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||||||||||||||||| ||||||| |||||||| |||||||| |||| |||||||||||||||||||||||  ||||||||||||| ||| ||||||    
T  31599794 aagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctttgca 31599892  T

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Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 31601085 - 31600983
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||||  ||||||| |||||||| |||||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||| |||    
T  31601085 gctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccattt 31600986  T
Q  423 gca 425  Q
    |||    
T  31600985 gca 31600983  T

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Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 10471488 - 10471397
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  10471488 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 10471397  T

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Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 1835202 - 1835097
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |  || |||||||||||||||| |||||||| |||| ||||||  |||||||||||||||| ||||||||||||| ||| |||    
T  1835202 gctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagccccttt 1835103  T
Q  423 gcatct 428  Q
    ||||||    
T  1835102 gcatct 1835097  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 8758935 - 8758846
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||  ||| |||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagattta 8758846  T

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Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 49308126 - 49308051
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  49308126 gctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 49308051  T

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Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 25685922 - 25685831
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| || |||||||||||||    
T  25685922 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagattta 25685831  T

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Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 1963197 - 1963299
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||||| | || |||||||||||||||||||   ||||||||| ||| ||| |||    
T  1963197 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagccccttt 1963296  T
Q  423 gca 425  Q
    |||    
T  1963297 gca 1963299  T

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Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 17382994 - 17383095
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||  |||| |||| ||| ||| |||    
T  17382994 gctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatccccttt 17383092  T
Q  423 gca 425  Q
    |||    
T  17383093 gca 17383095  T

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Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 19750673 - 19750584
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||| |||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagattta 19750584  T

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Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 19789133 - 19789222
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||| |||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagattta 19789222  T

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Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 17388310 - 17388235
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  17388310 gctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttg 17388235  T

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Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 26421721 - 26421631
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||| || ||||||||||||||| |||||||| || | |||||||||||||||||||||||| ||| |||||||||    
T  26421721 gctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagattta 26421631  T

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Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 1834120 - 1834226
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt-gaacccctaagatttaacccttt 421  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||||| |||| || ||| ||||||||||||||| |  ||||||||||||| ||| ||    
T  1834120 gctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccatt 1834219  T
Q  422 tgcatct 428  Q
    |||||||    
T  1834220 tgcatct 1834226  T

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Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 1964541 - 1964440
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||||||||||| ||||| |||||||||||||||| || | ||||||||||||||||||  ||| ||||| ||| ||| |||    
T  1964541 gctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatccccttt 1964442  T
Q  423 gc 424  Q
    ||    
T  1964441 gc 1964440  T

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Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 13509458 - 13509346
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||| |||||| |||||| ||||| || |||||||||||||  |||||  |||||||||||||||| ||||||||||||| ||| |||    
T  13509458 gctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagccccttt 13509360  T
Q  423 gcatctctgctcct 436  Q
    ||| || |||||||    
T  13509359 gcacctttgctcct 13509346  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 35935631 - 35935542
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||  ||||||||||||| ||||| || ||||||| ||||| |||||||| ||||||||||||||  |||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagattta 35935542  T

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Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 49306776 - 49306851
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||||||||| ||||  ||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  49306776 gctaaagtgcacttttttccccc-aactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 10470547 - 10470638
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||  ||||||| ||||  ||||||| |  |||||||||||||    
T  10470547 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagattta 10470638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 25684935 - 25685026
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||| |||  ||||||| ||||| ||||||| |  |||||||||||||    
T  25684935 gctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagattta 25685026  T

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Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 48780249 - 48780340
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| ||||||| |||||||| |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||||    
T  48780249 gctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattta 48780340  T

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Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 10447007 - 10447113
Alignment:
Q  323 gctaaagtgcactttttcccc-cttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    |||||||||||||||| |||| ||||| ||||||||| || ||||||| ||||| || |||||||||| ||||||||   ||||||||||||| ||| ||    
T  10447007 gctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccctt 10447106  T
Q  422 tgcatct 428  Q
    |||||||    
T  10447107 tgcatct 10447113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 8155741 - 8155843
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggc-cccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    |||||||||||||| ||||  |||||||||||||||| ||||||| || ||| ||||| |||||||||||||||||  ||||||||||||| ||  ||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttg 8155838  T
Q  424 catct 428  Q
    |||||    
T  8155839 catct 8155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 13386633 - 13386544
Alignment:
Q  323 gctaaagtgcactttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagat 411  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||| |||| ||||||| ||||| ||||||| |  ||||||||||    
T  13386633 gctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagat 13386544  T

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Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 428
Target Start/End: Complemental strand, 21539162 - 21539066
Alignment:
Q  332 cactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||| | ||||||| ||| |||||||| ||||||||||| | |||||  ||||||||||||||||| ||||||||||||| | | |||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatct 21539066  T

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Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 414
Target Start/End: Original strand, 5525372 - 5525451
Alignment:
Q  335 tttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||| |||||||||||||||| |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||||    
T  5525372 tttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattta 5525451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 5526225 - 5526135
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||| || ||||||||||||||| ||||||||||||| ||||||  ||||| ||||||| |  |||||||||||||    
T  5526225 gctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagattta 5526135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 52491707 - 52491616
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||  ||||||| |||||    
T  52491707 gctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaattta 52491616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 13386015 - 13386090
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaa-cttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| ||||  ||||||||||||| ||| ||||||||||||| ||||||| ||||| |||||||    
T  13386015 gctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 21177998 - 21178099
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||  |||||| |||||||| ||| || ||||||||  ||| || | ||||||||||||||||||| ||||||| ||||| |||||||    
T  21177998 gctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagccctttt 21178096  T
Q  423 gca 425  Q
    |||    
T  21178097 gca 21178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 50909773 - 50909667
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccc-taagatttaacccttt 421  Q
    ||||||||||||||||||| || ||| ||| ||||| || | |||||| | || || ||| ||||||||||||||||| |||| ||||||||| ||| ||    
T  50909773 gctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccctt 50909674  T
Q  422 tgcatct 428  Q
    |||||||    
T  50909673 tgcatct 50909667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 37728662 - 37728574
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||| ||||||| ||| |||||| ||||| || ||||||||||| | || ||||||||||||||||||||| ||  |||||||||    
T  37728662 taaagtgcattttttcctcct-aacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagattta 37728574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 48781145 - 48781055
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  ||||||||||||| || ||||||||| ||| ||||||| ||||| ||||||| |  ||||||| |||||    
T  48781145 gctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccc-taagtactaaaaccacaatttagcccccctaaaattta 48781055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 55603628 - 55603555
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||   ||| |  ||||||||||||| ||||||    
T  55603628 taaagtgcactttttcccc-ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttg 55603555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 10448360 - 10448255
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||   | ||| ||| ||||||||| || | ||||| ||||| || ||||||||||||||||||||  || ||||||| || ||| |||    
T  10448360 gctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagccccttt 10448261  T
Q  423 gcatct 428  Q
    ||||||    
T  10448260 gcatct 10448255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 3928958 - 3928882
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| ||||| ||||||||||||  || | ||||||||||| || |||  ||||| |||||||||    
T  3928958 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttg 3928882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 1289100 - 1289203
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||| |||||| ||||||||||||||||| | ||  |||||||  ||  |||||| |||||||||||||||   | | |||||||||||||  ||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgc 1289199  T
Q  425 atct 428  Q
    ||||    
T  1289200 atct 1289203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 14868891 - 14868964
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| |||||| | ||||||||| ||| ||||||||||||  ||||||  ||||| |||||||    
T  14868891 gctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 14877043 - 14876970
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| |||||| | ||||||||| ||| ||||||||||||  ||||||  ||||| |||||||    
T  14877043 gctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 35934347 - 35934434
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| ||||  ||||||||||||||||  |||||||| ||| |||||| | ||| || |||||||  ||| |||||||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagattta 35934434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 398
Target Start/End: Original strand, 55602379 - 55602451
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||| | ||  ||  || |||||||||||||||    
T  55602379 taaagtgca-tttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttt 55602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 19489 - 19594
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||    
T  19489 gctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaaccccttt 19588  T
Q  423 gcatct 428  Q
    ||||||    
T  19589 gcatct 19594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 18371425 - 18371530
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| | | |||    
T  18371425 gctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacattt 18371524  T
Q  423 gcatct 428  Q
    ||||||    
T  18371525 gcatct 18371530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 31659623 - 31659715
Alignment:
Q  323 gctaaagtgcactttttccccct-taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  31659623 gctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagattta 31659715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 3227694 - 3227603
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||    
T  3227694 gctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagattta 3227603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 18372544 - 18372452
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||| ||| |||| ||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatct 18372452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 412
Target Start/End: Complemental strand, 22630552 - 22630463
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatt 412  Q
    |||||||||||||||| || || |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||   |||||||||||    
T  22630552 gctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagatt 22630463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 419
Target Start/End: Complemental strand, 17782653 - 17782557
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccct 419  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  ||||||||||||| ||||    
T  17782653 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccct 17782557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 31949902 - 31949811
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||| || ||||| |||||||||||||||| ||||||||||||| ||| ||| ||||| ||||||| | ||||||||||||||    
T  31949902 gctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagattta 31949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 22629506 - 22629592
Alignment:
Q  342 cccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||| ||||||||||||  |||||||||| | |||||||||||||||||||||||  ||||||||||||| ||| |||||||||    
T  22629506 cccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatct 22629592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 7500456 - 7500560
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||  ||  |||||| | |||| |||||||||  ||||||||||||| ||| |||    
T  7500456 gctaaagtgcactttt-cccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagccccttt 7500554  T
Q  423 gcatct 428  Q
    ||||||    
T  7500555 gcatct 7500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 7501952 - 7501847
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||  ||| |||||| || ||| |||    
T  7501952 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagccccttt 7501853  T
Q  423 gcatct 428  Q
    ||||||    
T  7501852 gcatct 7501847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 47369782 - 47369887
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||| ||||||||||  ||| |||||||||||||||| ||||||| ||| | ||||||||||||||| |||||||  ||| ||||||||| ||| |||    
T  47369782 gctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagccccttt 47369881  T
Q  423 gcatct 428  Q
    ||||||    
T  47369882 gcatct 47369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 11658380 - 11658456
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||| ||||||||| |||||||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||    
T  11658380 gctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttg 11658456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 31949323 - 31949414
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| || || ||| |||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  31949323 gctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 31949414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 42886384 - 42886281
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||||||||  || | ||||||||||||| || |||||||| |||| ||| ||||||||||||||||||   ||||||||||||| ||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  425 atct 428  Q
    ||||    
T  42886284 atct 42886281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 17781663 - 17781753
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||| |||| ||||||| ||||| |||||||    |||||||||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagattta 17781753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 21505417 - 21505520
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||||||||| || | |||||||||||  |  |||||||||||||||||||| ||| ||||||||| ||| |||    
T  21505417 gctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagccccttt 21505514  T
Q  423 gcatct 428  Q
    ||||||    
T  21505515 gcatct 21505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 34352886 - 34352792
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacc 417  Q
    |||||||||||||||||| ||  ||| |||||||||||| | ||||||| |||||||||||| |||||| |||||||  || |||||||||||||    
T  34352886 gctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaacc 34352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 127338 - 127427
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||| ||| ||||||| ||||| ||||||| |  |||||||||||||    
T  127338 gctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttag-ccccctaagattta 127427  T

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Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 47525467 - 47525376
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||| ||||| ||||||  ||||| ||||||| |  |||||||||||||    
T  47525467 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagattta 47525376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 48935003 - 48934901
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| | ||| ||||||||||||||||  ||||||| |||  ||||||||||||||| |||||||| |||| |||| ||| ||| |||    
T  48935003 gctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccattt 48934904  T
Q  423 gca 425  Q
    |||    
T  48934903 gca 48934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 428
Target Start/End: Complemental strand, 14999249 - 14999150
Alignment:
Q  327 aagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcat 426  Q
    |||||||||||| |||||| || |||||||| ||| |||||||| |||| ||| |||||||||||||||||||   |||||||||||| ||| |||||||    
T  14999249 aagtgcacttttcccccct-aattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcat 14999152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 11662649 - 11662549
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||| || |  || |||||||||||| |||||||  |||| |||| ||| ||| |||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T
Q  425 a 425  Q
    |    
T  11662549 a 11662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 412
Target Start/End: Complemental strand, 128699 - 128612
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatt 412  Q
    |||||||||||||| || || ||||||||||||| || |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatt 128612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 3227109 - 3227199
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||  |||||| || |||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  ||| |||||||||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagattta 3227199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 394
Target Start/End: Complemental strand, 20163656 - 20163585
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaa 394  Q
    |||||||||||||| | | ||| |||||||||||||||| |||||||||| || || |||||||||||||||    
T  20163656 gctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  329 gtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatt 396  Q
    |||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 34174082 - 34174010
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatt 396  Q
    |||||||||||||||| |||||| | ||||||||| ||| ||||||||||||| ||||||| ||||| ||||||    
T  34174082 gctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 14998009 - 14998067
Alignment:
Q  323 gctaaagtgcac-tttttcccccttaactttcaaaaacttacaattttggccccttaag 380  Q
    |||||||||||| |||||  ||| |||||||||||||||||||||||||||||| ||||    
T  14998009 gctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggccccctaag 14998067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 31661109 - 31661015
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacc 417  Q
    |||||||||||||||  || |  ||||||||||||| || |||||||| ||| ||| |||||||||||| ||||||   ||||||| ||||||||    
T  31661109 gctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaatttaacc 31661015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 414
Target Start/End: Original strand, 48933681 - 48933759
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||  |||| ||| |||||||| ||||||||  ||||||   ||||||||||||||||||| ||| |||||||||    
T  48933681 ttttcccttttaaattttaaaaacttgcaattttgatcccttataaacaaaaactacaattttgatcccttaagattta 48933759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 769414 - 769519
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| | ||  ||| |||||||||||| |||||||| |  | |||||||||||| || |||||||   |||| ||| ||||||| |||    
T  769414 gctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccattt 769513  T
Q  423 gcatct 428  Q
    ||||||    
T  769514 gcatct 769519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 21508502 - 21508453
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccc 374  Q
    ||||||||||| ||||  |||||||||||||||||| || ||||||||||||    
T  21508502 gctaaagtgcattttt--ccccttaactttcaaaaagtttcaattttggccc 21508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 17471 - 17573
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||  |||| |||| ||| ||| |||    
T  17471 gctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatccccttt 17570  T
Q  423 gca 425  Q
    |||    
T  17571 gca 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 18876 - 18800
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||||||| | ||||||| ||||| || ||||||||| ||| || |||||||||||| |||||||    
T  18876 gctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttg 18800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 18904368 - 18904473
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||   |||||||| ||| ||| |||    
T  18904368 gctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagccccttt 18904467  T
Q  423 gcatct 428  Q
     |||||    
T  18904468 acatct 18904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 36449779 - 36449855
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36449779 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 36449855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 38840593 - 38840502
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||   |||||||||||||    
T  38840593 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagattta 38840502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 18299374 - 18299479
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| ||||||||||| | |||||| ||||||||||||||||  |||||| |||||| |||||||    
T  18299374 gctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagccctttt 18299473  T
Q  423 gcatct 428  Q
    ||||||    
T  18299474 gcatct 18299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 7899982 - 7899891
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||   |||||||||||||    
T  7899982 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagattta 7899891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 38839243 - 38839334
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||||||||  |||||||||||||    
T  38839243 gctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagattta 38839334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 41879312 - 41879221
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||| | ||||||| |||||    
T  41879312 gctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaattta 41879221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 18797247 - 18797353
Alignment:
Q  323 gctaaagtgcactttttc-ccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    |||||||||||||||| | |||| |||||||||||||||| |||||||| |||||||||||  |||||||||||||||| ||||||| ||||| ||| ||    
T  18797247 gctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccctt 18797346  T
Q  422 tgcatct 428  Q
    |||||||    
T  18797347 tgcatct 18797353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 22848192 - 22848294
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||   |||||||||||| ||| |||    
T  22848192 gctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagccccttt 22848291  T
Q  423 gca 425  Q
    |||    
T  22848292 gca 22848294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 18906087 - 18905983
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||   |||||||||||||||| ||||||| ||||| |||||||||||||||||||||| | ||||||||||||| | | |||    
T  18906087 gctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt-agcccctaagatttagctcattt 18905989  T
Q  423 gcatct 428  Q
    ||||||    
T  18905988 gcatct 18905983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 22588053 - 22587949
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| |||| ||| | |||||||||||||||| ||||||||||||| || ||||||||||||||||||||  ||| ||||||||| ||| |||    
T  22588053 gctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccccttaagatttagccccttt 22587955  T
Q  423 gcatct 428  Q
    ||||||    
T  22587954 gcatct 22587949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 23869634 - 23869530
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||    |||||||||||| ||| |||    
T  23869634 gctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagccccttt 23869536  T
Q  423 gcatct 428  Q
    ||||||    
T  23869535 gcatct 23869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 802690 - 802588
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||| |||||| || |||||||||||| ||||||||||||| |  ||||||||||||||||||||| || ||||||||| |||| |||    
T  802690 gctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttaccccttt 802592  T
Q  423 gcat 426  Q
    ||||    
T  802591 gcat 802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 1034569 - 1034478
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| |||||||||||||||||||| | ||||||||||||| || |||| ||||| ||||||| |  |||||||||||||    
T  1034569 gctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagattta 1034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 13030293 - 13030395
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||||||||||||  ||||||||||||| ||||||||||| |||||||||   ||||||||||||| | |||||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttttgccccctaagatttagctctttt 13030389  T
Q  423 gcatct 428  Q
    ||||||    
T  13030390 gcatct 13030395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 7898694 - 7898783
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||| ||| | |||||| | ||||||||||||||  |||||||||||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagattta 7898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 26545621 - 26545516
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||||||  | | ||||||||||| || |||||||| |||||||| |||||||| || |||||||| || |||||||||| ||| |||    
T  26545621 gctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagccccttt 26545522  T
Q  423 gcatct 428  Q
    ||||||    
T  26545521 gcatct 26545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 11258888 - 11258820
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||    
T  11258888 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagattta 11258820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 32739624 - 32739700
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||| | |||||  ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  32739624 gctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 32739700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 36451018 - 36450947
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  36451018 taaagtgcactttt-cccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattt 36450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 18300822 - 18300720
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||| ||||||||| ||||  ||||||||| |||||| |||||||| |||| ||||||||||||||||||||||| |||||||  ||||| ||| |||    
T  18300822 gctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttg-acccctataatttagccccttt 18300726  T
Q  423 gcatct 428  Q
    ||||||    
T  18300725 gcatct 18300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 18868925 - 18869002
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    ||||||||| |||||| | ||| |||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  18868925 gctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttga 18869002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 810854 - 810778
Alignment:
Q  350 tttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcat 426  Q
    |||||||||||| ||||||||||||| |  ||||||||||||||||||||| || ||||||||| |||| |||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcat 810778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 41878093 - 41878186
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaact---tacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||  |||||||||||||||||||||   | ||||||||||||| |||||||| ||||||||||||||  ||| |||||||||    
T  41878093 gctaaagtgcactttc-cccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagattta 41878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 28617926 - 28618027
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||| || |||||| |||| ||||||||||| ||| |||||||||||||  ||||||||||||| ||||||||  ||||||||||||| ||| |||||    
T  28617926 taaagtacattttttctccct-aactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttg-ccccctaagatttagcccctttgc 28618023  T
Q  425 atct 428  Q
    ||||    
T  28618024 atct 28618027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 11938888 - 11938787
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||| |||||||||||||||| ||||||||| | | |||||||||||| || |||||||  ||||||||| ||| | |||||    
T  11938888 gctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctctttt 11938790  T
Q  423 gca 425  Q
    |||    
T  11938789 gca 11938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 16446155 - 16446257
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||| ||||   |||||||||||||||||||| |||||||  || | ||| ||||||||||||||||||||  ||| |||| ||||||| |||    
T  16446155 gctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttgataccccaagaattaacccattt 16446254  T
Q  423 gca 425  Q
    |||    
T  16446255 gca 16446257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 24476942 - 24476867
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    |||| |||||||||||||||||  |||||| ||||||||  |||||||| ||| ||||||||||||||||||||||||    
T  24476942 gctagagtgcactttttccccc--aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttga 24476867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 13570657 - 13570581
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||| ||||   ||| |||||||||||||||| ||||||| | ||||||||||||||||||| |||||||    
T  13570657 gctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttg 13570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 8534596 - 8534659
Alignment:
Q  336 ttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||||| |||||||||||||||||||||  || ||||||| | ||||||||||||||    
T  8534596 ttttcccccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttg 8534659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 13567975 - 13568050
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    ||||||| |||||| |||   ||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttga 13568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 21837353 - 21837298
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaag 380  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||    
T  21837353 gctaaagtgcactttttcccc--taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 428
Target Start/End: Complemental strand, 18869241 - 18869157
Alignment:
Q  346 taactttcaaaaactta-caattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc-ttttgcatct 428  Q
    ||||||||||||| ||  |||||||||||   |||||||||||||||||||||| | ||||||||||||| ||| ||||||||||    
T  18869241 taactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatct 18869157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 11257623 - 11257713
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| | ||  |||||||||||||||| |||||||   ||| |||||| ||||||||||||||||  | |||||||||||    
T  11257623 gctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcctcctaagattta 11257713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 21837071 - 21837122
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccct 376  Q
    ||||||||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  21837071 gctaaagtgcactttttcctc--taactttcaaaaacttgcaattttggcccct 21837122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 428
Target Start/End: Original strand, 22587525 - 22587606
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||| || ||||||||| ||| ||  |||||||||||||||||||  ||||||||||||| ||  |||||||||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatct 22587606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 428
Target Start/End: Original strand, 24475248 - 24475330
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||||||  |||||| ||||| |||||| ||||||||||||||||  ||||||  ||||| | | |||||||||    
T  24475248 taactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatct 24475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 8535733 - 8535654
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    ||||||| ||||||||  |||||||  || ||||||| | ||||||||||||||| ||||||||| ||| ||| ||||||    
T  8535733 taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgca 8535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 5819796 - 5819726
Alignment:
Q  340 cccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaaga 410  Q
    ||||||||| ||||||||| || | ||||||||||| || | |||||||||||||| |||| ||| |||||    
T  5819796 cccccttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaatcttgatcccttaaga 5819726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 1033212 - 1033264
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccct 376  Q
    ||||||||| |||||| |||||| |||||| |||||||| ||||||||||||||    
T  1033212 gctaaagtgtacttttcccccct-aacttttaaaaacttgcaattttggcccct 1033264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 61559 - 61454
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||||||| |||||||||||| ||||||| ||||| ||||||||||||||| |||||||  |||||| |||||| |||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  423 gcatct 428  Q
    ||||||    
T  61459 gcatct 61454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 60091 - 60196
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||  ||||||| |||||||| |||||||| |||| || ||| ||||||||||||||||| |||||| |||||| ||| |||    
T  60091 gctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagccccttt 60190  T
Q  423 gcatct 428  Q
    ||||||    
T  60191 gcatct 60196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 6346 - 6449
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    |||||||||||||| | ||||||| ||||||||| |||| ||||| ||||| || ||||||||||||||||||||| ||||||||||||| || ||||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgc 6445  T
Q  425 atct 428  Q
    ||||    
T  6446 atct 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 9125 - 9022
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||||||||||||| |||||| ||||||||| ||   ||||| ||| | || ||||||||||||||||||||  ||||||||||||| ||||  |    
T  9125 gctaaagtgcactttttcctccttaa-tttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttg-gcccctaagatttagccctcat 9028  T
Q  423 gcatct 428  Q
    ||||||    
T  9027 gcatct 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 5538 - 5447
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||  ||| |||||||||    
T  5538 gctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagattta 5447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 398
Target Start/End: Original strand, 4443 - 4518
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4443 gctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaatttt 4518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 1829701 - 1829598
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||||||||| |||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||||  ||||||||||||| ||| |||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgc 1829602  T
Q  425 atct 428  Q
    ||||    
T  1829601 atct 1829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 16704597 - 16704506
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||  |||||||||    
T  16704597 gctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagattta 16704506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 7314881 - 7314985
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||| ||||||||||||| ||| |||    
T  7314881 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtatcaaaacaacaattttgaccccctaagatttagccccttt 7314979  T
Q  423 gcatct 428  Q
    ||||||    
T  7314980 gcatct 7314985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 14823676 - 14823584
Alignment:
Q  323 gctaaagtgcacttttt-cccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  14823676 gctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagattta 14823584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 7316394 - 7316289
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||   |||| |||||||||  ||| ||||||||| ||| |||    
T  7316394 gctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagccccttt 7316295  T
Q  423 gcatct 428  Q
    ||||||    
T  7316294 gcatct 7316289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 6840207 - 6840298
Alignment:
Q  337 tttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    |||||||||||| ||||||||| || | ||||||||||||||| ||||||||||| |||||||| || ||||||||||| || |||||||||    
T  6840207 tttcccccttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctttgcatct 6840298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 8659266 - 8659357
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  8659266 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 8659357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 8821874 - 8821965
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||    
T  8821874 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 8821965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 14822361 - 14822452
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||| |||||||||||  |||||||| |||||||||||| ||||||||||||| |||||| | ||||||||||||||  |||||||||||||    
T  14822361 gctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagattta 14822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 26575131 - 26575052
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||||  ||||||||||||||| | ||||||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgca 26575052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 8822893 - 8822802
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| || | ||||||||||||||||| |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||||    
T  8822893 gctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattta 8822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 10784593 - 10784696
Alignment:
Q  323 gctaaagtgcactttttcc-cccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttt 421  Q
    |||||||||||||||| || ||||||||||| |||||||| |||||||  |||| |||||| ||||||||||||||||  |||| |||||||| ||| ||    
T  10784593 gctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccctt 10784692  T
Q  422 tgca 425  Q
    ||||    
T  10784693 tgca 10784696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 27437829 - 27437920
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||  |||||||||||| ||||| || ||||||||||||| ||   | ||||||||||||||||| |||||||||||||    
T  27437829 gctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagattta 27437920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 3721613 - 3721704
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| |||||||| |||| ||||||| ||||| | ||||| || ||| |||||||||    
T  3721613 gctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagattta 3721704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 8660303 - 8660213
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||| | |||||||||||||||| |||||||| |||| ||||||| ||||| ||||||| |  |||||||||||||    
T  8660303 gctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaagattta 8660213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 10786001 - 10785911
Alignment:
Q  335 tttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||||||||| ||||||| ||||| || |||||||  |||| |||||||||||||||||||||| | ||| ||||||||| ||| ||||||    
T  10786001 tttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgca 10785911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 428
Target Start/End: Complemental strand, 12382811 - 12382706
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| | ||  ||| ||| ||||| ||  ||||||| |||| ||||||  ||||||| |||||||| |||| ||||||||||||||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  423 gcatct 428  Q
    ||||||    
T  12382711 gcatct 12382706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 27322167 - 27322067
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||| | ||||||||| ||| ||||||||||||| ||||||| ||||| ||||||||   ||||||||| ||| ||| |||    
T  27322167 gctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagccccttt 27322069  T
Q  423 gc 424  Q
    ||    
T  27322068 gc 27322067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 5658759 - 5658859
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgc 424  Q
    ||||||||| |||| ||||||||| ||| ||||| ||| |||||| |  || || ||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgc 5658858  T
Q  425 a 425  Q
    |    
T  5658859 a 5658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 17496816 - 17496904
Alignment:
Q  341 ccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt-gaacccctaagatttaacccttttgcatct 428  Q
    |||| ||||||||||||||||||||||||  |||  |||||||||||||| ||||||| |  ||||||||||||||||  |||||||||    
T  17496816 ccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgcatct 17496904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 6842383 - 6842308
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    |||||||||||||||| ||||  ||| ||||||||| || ||||||||||||| || || ||||||||||||||||    
T  6842383 gctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 3722607 - 3722533
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||||||| || || |||||||||||||||| |||||||| |||  ||||||| ||||| |||||||    
T  3722607 gctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 27318316 - 27318389
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattt 397  Q
    |||||||||||| |||||||||| | ||||||||| ||| ||||||||||||| ||||||| ||||| |||||||    
T  27318316 gctaaagtgcaccttttccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 26717183 - 26717127
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaag 380  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||||||| |||||||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgaccccttaag 26717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 425
Target Start/End: Original strand, 26574643 - 26574721
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgca 425  Q
    |||||||||||||||| ||||||||  ||  |||||||||||||||| ||||||| ||| ||||||||| ||| ||||||    
T  26574643 taactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccctttgca 26574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 428
Target Start/End: Complemental strand, 26949263 - 26949180
Alignment:
Q  342 cccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcatct 428  Q
    ||||||||||||||||| || |||||||| |||  |||||| ||||||||||||||| | |  |||||||||||||| |||||||||    
T  26949263 cccttaactttcaaaaa-ttgcaattttgcccc--taagtataaaaactacaattttaatcttctaagatttaacccctttgcatct 26949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 27448013 - 27447962
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccc 374  Q
    |||||||||||||||| ||||||||| ||| ||||| |||||||||||||||    
T  27448013 gctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 27447962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 34834677 - 34834588
Alignment:
Q  325 taaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||| || || |||||||||||||||| ||||||||  | | ||||||  ||||| ||||||| |  |||||||||||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagattta 34834588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 16703571 - 16703663
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc 418  Q
    |||||||||||||||| ||||  || ||||||||||||| ||||||||  || | || ||||||||||||||||||   ||||||| |||||||||    
T  16703571 gctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatccataaa-tacaaaaactacaattttagccccctaaaatttaaccc 16703663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 3333126 - 3333024
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||| ||||||||| |||   ||| ||| ||||| || | ||||||||||| || ||||||||||||||||||| | || |||| ||||| ||| |||    
T  3333126 gctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagccccttt 3333027  T
Q  423 gca 425  Q
    |||    
T  3333026 gca 3333024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 1828740 - 1828816
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttg 399  Q
    ||||||||||| ||||||||| |||| ||| ||||| || ||||||||||   |||||| |||||| || |||||||    
T  1828740 gctaaagtgcattttttcccctttaatttttaaaaatttgcaattttggctttttaagttcaaaaattataattttg 1828816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  347 aactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttg 423  Q
    |||||| | |||||| |||||||| ||||| | ||| ||||||||||||||| | ||||||||||||| ||| ||||    
T  12350823 aactttaataaacttgcaattttgacccct-atgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 30495796 - 30495695
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaaccc-ctaagatttaacccttt 421  Q
    |||||||||||||||||||||  ||||||||||||| || | |||||   ||| || |||||||||  |||||||||  ||| |||||||||| ||| ||    
T  30495796 gctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccatt 30495699  T
Q  422 tgca 425  Q
    ||||    
T  30495698 tgca 30495695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 3407 - 3306
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| |||| || |||||||||||| |||||||  ||||||||||||| ||| |||    
T  3407 gctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagccccttt 3309  T
Q  423 gca 425  Q
    |||    
T  3308 gca 3306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 234 - 337
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||  ||||||||||||||||||| || ||||||||| ||| || |||||||||||| |||||||  ||||||||| ||| ||| |||    
T  234 gctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagccccttt 333  T
Q  423 gcat 426  Q
    ||||    
T  334 gcat 337  T

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Target: scaffold2034; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 1058 - 975
Alignment:
Q  343 ccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaacccttttgcat 426  Q
    |||||||||| ||||| || ||||||||| |||||| |||||||||||| |||||||  |||| |||| ||| ||| |||||||    
T  1058 ccttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcat 975  T

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Target: scaffold1303 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 1440 - 1545
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    ||||||||| |||||| ||||  ||||||| |||||||| |||||||| |||| || ||| |||||||| |||||||| ||||||||||||| ||| |||    
T  1440 gctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccattt 1539  T
Q  423 gcatct 428  Q
    ||||||    
T  1540 gcatct 1545  T

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Target: scaffold0003 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 49533 - 49442
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    ||||||||||||||||  |||||||||||| ||||| || ||||||||||||| ||   | ||||||||||||||||| |||||||||||||    
T  49533 gctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagattta 49442  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 374
Target Start/End: Original strand, 39345 - 39396
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccc 374  Q
    |||||||||||||||| ||||||||| ||| ||||| |||||||||||||||    
T  39345 gctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 39396  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 18730 - 18824
Alignment:
Q  324 ctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccc 418  Q
    ||||||||||||||||||| ||||||||| ||||| || | |||||| || | || | ||||||||||||||||||| | ||||||| |||||||    
T  18730 ctaaagtgcactttttccctcttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaattttgacctcctaagaattaaccc 18824  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 425
Target Start/End: Complemental strand, 7515 - 7413
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||| | ||||  ||| ||| ||||| |||| |||||| |||| || ||||| ||||||||||||||| ||||||||||||| ||| |||    
T  7515 gctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagccccttt 7416  T
Q  423 gca 425  Q
    |||    
T  7415 gca 7413  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 49184 - 49109
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaatttt 398  Q
    |||||| ||||||||| | ||||||||||| |||||||| ||||||||||| | ||||||  ||||||||||||||    
T  49184 gctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 2564 - 2474
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaa-cttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  ||||||||||||| ||| |||||||| |||| ||||||||||||| || ||||||  |||||| ||||||    
T  2564 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgattta 2474  T

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Target: scaffold0093; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 7187 - 7097
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaa-cttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  ||||||||||||| ||| |||||||| |||| ||||||||||||| || ||||||  |||||| ||||||    
T  7187 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgattta 7097  T

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Target: scaffold0186 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 23082 - 23171
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||  |||||||||||||||| |||||||| |||  ||||||| ||||| ||||| |||  |||||||| ||||    
T  23082 gctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagcttta 23171  T

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Target: scaffold0186; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 23990 - 23941
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggc 372  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||||||    
T  23990 gctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggc 23941  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 4829 - 4753
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttga 400  Q
    |||||||||||||||  | |||| |||||| |||||| | ||||||||||||| ||| |||| |||||||||||||||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttga 4753  T

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Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 3699 - 3767
Alignment:
Q  346 taactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||||||||||| | |||| | |||||| ||||||   |||||||||||||    
T  3699 taactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagattta 3767  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 13194 - 13295
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagatttaaccctttt 422  Q
    |||||||||||||||| ||||  ||||||| ||||| ||   |||||| || | || |||| ||||||||||||||   ||||||||||||||| |||||    
T  13194 gctaaagtgcacttttccccc--taactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagatttaactctttt 13291  T
Q  423 gcat 426  Q
    ||||    
T  13292 gcat 13295  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 37149 - 37239
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggccccttaagtacaaaaactacaattttgaacccctaagattta 414  Q
    |||||||||||||||| ||||||    ||| ||||| || |||||||| |||| ||||||||||||| |||||||||  |||||| ||||||    
T  37149 gctaaagtgcactttt-ccccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgattta 37239  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 219 - 167
Alignment:
Q  323 gctaaagtgcactttttcccccttaactttcaaaaacttacaattttggcccc 375  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||||    
T  219 gctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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