View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10721_low_21 (Length: 238)

Name: NF10721_low_21
Description: NF10721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10721_low_21
NF10721_low_21
[»] chr5 (49 HSPs)
chr5 (9-225)||(24008855-24009071)
chr5 (9-225)||(10686947-10687163)
chr5 (9-223)||(5455293-5455506)
chr5 (86-225)||(43029844-43029982)
chr5 (9-154)||(40010063-40010208)
chr5 (9-154)||(30781939-30782085)
chr5 (9-181)||(25847182-25847355)
chr5 (17-181)||(25853763-25853928)
chr5 (9-154)||(14881404-14881549)
chr5 (9-154)||(14888081-14888226)
chr5 (9-154)||(14614040-14614185)
chr5 (87-225)||(20341341-20341478)
chr5 (87-225)||(20347945-20348082)
chr5 (9-154)||(22247328-22247473)
chr5 (87-225)||(18567392-18567529)
chr5 (16-225)||(28259025-28259231)
chr5 (14-154)||(38014609-38014751)
chr5 (16-149)||(7772745-7772877)
chr5 (82-225)||(5337518-5337660)
chr5 (43-119)||(598168-598244)
chr5 (61-149)||(22501855-22501944)
chr5 (87-154)||(1110847-1110914)
chr5 (67-154)||(23560721-23560808)
chr5 (73-154)||(19509040-19509121)
chr5 (61-149)||(22508436-22508525)
chr5 (86-154)||(24799548-24799616)
chr5 (80-153)||(21889529-21889601)
chr5 (86-163)||(37575351-37575428)
chr5 (87-154)||(18940383-18940450)
chr5 (63-119)||(428186-428243)
chr5 (80-153)||(15193131-15193203)
chr5 (86-154)||(19799508-19799576)
chr5 (86-146)||(29745761-29745821)
chr5 (86-154)||(33536967-33537035)
chr5 (87-154)||(15462344-15462411)
chr5 (86-157)||(19799039-19799109)
chr5 (87-154)||(23544029-23544096)
chr5 (86-157)||(23075458-23075530)
chr5 (86-157)||(23081171-23081243)
chr5 (80-179)||(18819827-18819923)
chr5 (67-153)||(21830469-21830556)
chr5 (84-154)||(22231864-22231934)
chr5 (84-154)||(22237017-22237087)
chr5 (87-149)||(26651320-26651382)
chr5 (87-149)||(26922905-26922967)
chr5 (88-153)||(6403651-6403716)
chr5 (84-149)||(16774219-16774284)
chr5 (86-154)||(5581456-5581524)
chr5 (79-119)||(30344698-30344738)
[»] chr3 (60 HSPs)
chr3 (9-225)||(21353021-21353237)
chr3 (9-225)||(2498141-2498357)
chr3 (9-149)||(54832307-54832448)
chr3 (16-225)||(46070218-46070424)
chr3 (19-154)||(28759775-28759910)
chr3 (19-154)||(43723198-43723333)
chr3 (9-154)||(14844262-14844407)
chr3 (19-154)||(50141878-50142013)
chr3 (16-225)||(20376350-20376556)
chr3 (60-154)||(50655156-50655251)
chr3 (16-149)||(9690575-9690707)
chr3 (24-225)||(29551771-29551969)
chr3 (82-225)||(32387190-32387332)
chr3 (9-113)||(3109414-3109518)
chr3 (87-225)||(30596037-30596173)
chr3 (43-111)||(16413415-16413482)
chr3 (16-153)||(18135419-18135555)
chr3 (86-154)||(29494462-29494530)
chr3 (86-154)||(51246650-51246718)
chr3 (87-149)||(51854279-51854341)
chr3 (87-149)||(53570408-53570470)
chr3 (86-163)||(54090911-54090987)
chr3 (16-118)||(12203279-12203380)
chr3 (84-156)||(12355178-12355250)
chr3 (16-153)||(18127649-18127785)
chr3 (87-154)||(10382848-10382915)
chr3 (19-154)||(47122052-47122187)
chr3 (19-154)||(47129420-47129555)
chr3 (86-154)||(21150662-21150730)
chr3 (79-153)||(11304910-11304985)
chr3 (84-155)||(11964084-11964155)
chr3 (84-153)||(15519435-15519504)
chr3 (88-157)||(18961864-18961932)
chr3 (86-154)||(9771094-9771162)
chr3 (84-156)||(11939058-11939130)
chr3 (84-156)||(12478852-12478924)
chr3 (86-154)||(14293671-14293739)
chr3 (86-154)||(14299298-14299366)
chr3 (87-154)||(38743820-38743887)
chr3 (86-149)||(48773793-48773856)
chr3 (63-116)||(13692926-13692980)
chr3 (89-154)||(8373096-8373161)
chr3 (84-156)||(12361676-12361749)
chr3 (88-149)||(19343444-19343505)
chr3 (79-119)||(12536872-12536912)
chr3 (86-154)||(45612562-45612630)
chr3 (86-177)||(891704-891795)
chr3 (63-153)||(2269383-2269476)
chr3 (86-149)||(6926794-6926857)
chr3 (87-157)||(11963326-11963397)
chr3 (87-157)||(12724307-12724378)
chr3 (84-154)||(12960545-12960616)
chr3 (87-154)||(15081303-15081370)
chr3 (87-157)||(49164070-49164141)
chr3 (82-156)||(10596825-10596899)
chr3 (63-105)||(12153871-12153913)
chr3 (63-111)||(17497188-17497237)
chr3 (86-119)||(53871821-53871854)
chr3 (87-119)||(10423674-10423706)
chr3 (79-179)||(14570742-14570841)
[»] chr8 (44 HSPs)
chr8 (9-225)||(14735881-14736097)
chr8 (9-225)||(16886359-16886574)
chr8 (9-225)||(23223759-23223974)
chr8 (86-225)||(10955824-10955962)
chr8 (87-225)||(26485154-26485291)
chr8 (86-225)||(14745657-14745795)
chr8 (43-218)||(16265964-16266138)
chr8 (19-154)||(9204422-9204557)
chr8 (9-152)||(3223744-3223887)
chr8 (9-154)||(14766513-14766658)
chr8 (87-225)||(40143480-40143617)
chr8 (86-225)||(10947742-10947880)
chr8 (14-154)||(28981652-28981792)
chr8 (14-154)||(28986872-28987012)
chr8 (9-154)||(14567953-14568098)
chr8 (87-154)||(1051566-1051633)
chr8 (21-154)||(14564420-14564553)
chr8 (86-163)||(11391745-11391821)
chr8 (86-163)||(43688304-43688380)
chr8 (87-154)||(7003209-7003276)
chr8 (84-153)||(19987329-19987398)
chr8 (87-156)||(20258147-20258216)
chr8 (87-156)||(21044777-21044846)
chr8 (73-154)||(27346587-27346668)
chr8 (86-154)||(6588993-6589061)
chr8 (87-163)||(25700753-25700829)
chr8 (87-153)||(20004849-20004914)
chr8 (62-154)||(27364223-27364315)
chr8 (86-149)||(19297449-19297512)
chr8 (86-149)||(23118108-23118171)
chr8 (86-149)||(29304767-29304830)
chr8 (73-112)||(35541964-35542003)
chr8 (86-140)||(12304131-12304185)
chr8 (80-153)||(21685213-21685286)
chr8 (80-153)||(21689562-21689635)
chr8 (73-153)||(19860482-19860562)
chr8 (86-153)||(13361295-13361362)
chr8 (86-149)||(29298212-29298275)
chr8 (86-149)||(29329124-29329187)
chr8 (86-153)||(37240504-37240571)
chr8 (66-179)||(20007182-20007295)
chr8 (80-157)||(25623794-25623870)
chr8 (86-154)||(31411649-31411717)
chr8 (86-154)||(31417831-31417899)
[»] chr4 (50 HSPs)
chr4 (9-225)||(50083021-50083236)
chr4 (9-218)||(3265685-3265893)
chr4 (9-218)||(49239910-49240118)
chr4 (9-218)||(49748624-49748832)
chr4 (9-181)||(29381827-29382000)
chr4 (9-154)||(26396559-26396704)
chr4 (9-154)||(39265324-39265469)
chr4 (86-202)||(51931325-51931440)
chr4 (9-153)||(11938045-11938189)
chr4 (43-149)||(5939803-5939909)
chr4 (86-225)||(13480150-13480288)
chr4 (62-154)||(7360119-7360212)
chr4 (86-154)||(23435121-23435189)
chr4 (60-154)||(3259106-3259201)
chr4 (87-157)||(900464-900534)
chr4 (16-154)||(14063677-14063816)
chr4 (16-116)||(15359901-15360000)
chr4 (87-163)||(47870203-47870279)
chr4 (63-154)||(52501422-52501514)
chr4 (87-154)||(1584781-1584848)
chr4 (86-149)||(45958884-45958947)
chr4 (84-153)||(14555214-14555283)
chr4 (61-149)||(19127456-19127545)
chr4 (57-149)||(33222220-33222313)
chr4 (63-119)||(53904468-53904525)
chr4 (17-157)||(16228198-16228336)
chr4 (87-154)||(29447817-29447885)
chr4 (87-154)||(29454501-29454569)
chr4 (86-154)||(37622448-37622516)
chr4 (86-154)||(41528233-41528301)
chr4 (67-154)||(18165413-18165500)
chr4 (86-149)||(42955186-42955249)
chr4 (86-181)||(44662830-44662925)
chr4 (84-119)||(45141686-45141721)
chr4 (86-149)||(54825315-54825378)
chr4 (80-153)||(30239994-30240066)
chr4 (86-163)||(31665913-31665989)
chr4 (86-154)||(392039-392107)
chr4 (86-154)||(21882464-21882532)
chr4 (82-154)||(49051918-49051990)
chr4 (86-153)||(11170388-11170455)
chr4 (87-157)||(30397018-30397089)
chr4 (86-149)||(33097972-33098035)
chr4 (87-154)||(42221303-42221370)
chr4 (86-149)||(44656909-44656972)
chr4 (86-149)||(47871571-47871634)
chr4 (87-153)||(14991772-14991837)
chr4 (90-154)||(15325835-15325899)
chr4 (86-154)||(16999308-16999376)
chr4 (86-154)||(37882369-37882436)
[»] chr1 (51 HSPs)
chr1 (9-225)||(36211098-36211313)
chr1 (9-154)||(38907100-38907245)
chr1 (86-225)||(6741371-6741509)
chr1 (9-218)||(31534348-31534556)
chr1 (9-218)||(31563065-31563273)
chr1 (9-111)||(24425003-24425105)
chr1 (16-225)||(29601347-29601553)
chr1 (87-225)||(20293531-20293668)
chr1 (87-225)||(20300162-20300299)
chr1 (19-154)||(48428776-48428911)
chr1 (16-225)||(21921648-21921854)
chr1 (9-99)||(12203579-12203669)
chr1 (87-225)||(20571596-20571733)
chr1 (87-225)||(29150362-29150499)
chr1 (9-154)||(20075992-20076137)
chr1 (60-154)||(19045399-19045494)
chr1 (9-153)||(37676331-37676475)
chr1 (9-153)||(37683002-37683146)
chr1 (87-225)||(49328885-49329022)
chr1 (86-154)||(39188801-39188869)
chr1 (86-181)||(20276375-20276470)
chr1 (60-149)||(20396014-20396104)
chr1 (84-153)||(16882689-16882758)
chr1 (88-156)||(21736084-21736152)
chr1 (73-149)||(36918047-36918123)
chr1 (16-119)||(11140185-11140287)
chr1 (73-154)||(18419050-18419131)
chr1 (84-153)||(19853983-19854052)
chr1 (84-149)||(19860122-19860187)
chr1 (84-153)||(21665126-21665195)
chr1 (86-225)||(24108161-24108298)
chr1 (86-154)||(19777803-19777871)
chr1 (81-149)||(21963935-21964003)
chr1 (86-154)||(28555626-28555694)
chr1 (81-153)||(30490580-30490651)
chr1 (86-154)||(42627122-42627190)
chr1 (84-119)||(19665860-19665895)
chr1 (63-116)||(15315629-15315682)
chr1 (86-119)||(17150275-17150308)
chr1 (80-153)||(31926445-31926517)
chr1 (86-154)||(24080514-24080581)
chr1 (86-154)||(41052666-41052734)
chr1 (90-149)||(4232118-4232177)
chr1 (16-154)||(29553525-29553664)
chr1 (87-149)||(24237557-24237619)
chr1 (87-157)||(47485028-47485098)
chr1 (80-153)||(21699070-21699142)
chr1 (87-127)||(9292629-9292669)
chr1 (80-119)||(21986033-21986073)
chr1 (86-154)||(23065825-23065893)
chr1 (79-119)||(23194507-23194547)
[»] chr7 (67 HSPs)
chr7 (9-225)||(26089053-26089268)
chr7 (9-225)||(26112858-26113073)
chr7 (9-225)||(26119475-26119690)
chr7 (19-218)||(5186355-5186554)
chr7 (9-218)||(40683864-40684072)
chr7 (9-218)||(48987023-48987231)
chr7 (86-218)||(750704-750835)
chr7 (9-149)||(643479-643619)
chr7 (87-225)||(37288321-37288458)
chr7 (14-153)||(40922027-40922167)
chr7 (63-225)||(33405506-33405668)
chr7 (9-154)||(1318689-1318834)
chr7 (9-154)||(49151512-49151657)
chr7 (9-154)||(49158202-49158347)
chr7 (91-225)||(2387764-2387897)
chr7 (60-154)||(11340665-11340760)
chr7 (82-225)||(19463530-19463672)
chr7 (60-154)||(18436343-18436438)
chr7 (86-154)||(2025402-2025470)
chr7 (9-154)||(11298798-11298945)
chr7 (9-154)||(11307162-11307309)
chr7 (86-154)||(32628331-32628399)
chr7 (87-154)||(8196379-8196446)
chr7 (60-154)||(30602013-30602108)
chr7 (43-119)||(49159723-49159799)
chr7 (87-149)||(8213082-8213144)
chr7 (88-154)||(23521905-23521971)
chr7 (92-149)||(11898495-11898552)
chr7 (66-154)||(15085087-15085175)
chr7 (62-153)||(12429783-12429877)
chr7 (87-163)||(12454977-12455052)
chr7 (86-154)||(13020631-13020699)
chr7 (86-154)||(13026838-13026906)
chr7 (87-154)||(13452980-13453047)
chr7 (87-154)||(21758218-21758285)
chr7 (86-149)||(46175250-46175313)
chr7 (79-153)||(15436700-15436773)
chr7 (23-149)||(3328762-3328887)
chr7 (63-119)||(10520781-10520838)
chr7 (63-119)||(11854533-11854590)
chr7 (80-153)||(16475265-16475337)
chr7 (84-153)||(46347896-46347965)
chr7 (87-163)||(12462433-12462508)
chr7 (86-154)||(13963182-13963250)
chr7 (86-154)||(15839528-15839595)
chr7 (63-153)||(15097075-15097166)
chr7 (63-153)||(15103451-15103542)
chr7 (82-157)||(18956015-18956089)
chr7 (80-153)||(15143174-15143246)
chr7 (86-119)||(20018852-20018885)
chr7 (86-154)||(2439808-2439876)
chr7 (86-154)||(11219273-11219341)
chr7 (86-154)||(11879991-11880059)
chr7 (86-154)||(15632284-15632352)
chr7 (86-154)||(35961878-35961946)
chr7 (87-118)||(16184600-16184631)
chr7 (86-149)||(16843049-16843112)
chr7 (82-157)||(16951369-16951443)
chr7 (61-107)||(19600809-19600858)
chr7 (87-157)||(2312-2381)
chr7 (9-51)||(750870-750912)
chr7 (86-151)||(6412794-6412859)
chr7 (80-153)||(14580688-14580760)
chr7 (80-153)||(45186410-45186482)
chr7 (88-153)||(46681329-46681394)
chr7 (43-153)||(15722314-15722424)
chr7 (86-154)||(26288916-26288983)
[»] chr6 (36 HSPs)
chr6 (9-224)||(24370010-24370224)
chr6 (9-224)||(24363419-24363633)
chr6 (86-225)||(33875805-33875943)
chr6 (9-218)||(25464700-25464908)
chr6 (16-225)||(10469825-10470031)
chr6 (16-225)||(13127373-13127579)
chr6 (9-111)||(1537410-1537512)
chr6 (86-225)||(16222817-16222954)
chr6 (9-154)||(15331200-15331345)
chr6 (9-154)||(17310588-17310733)
chr6 (82-218)||(13941291-13941426)
chr6 (13-154)||(1071586-1071727)
chr6 (16-119)||(18787079-18787181)
chr6 (86-163)||(93675-93751)
chr6 (86-163)||(27768273-27768349)
chr6 (86-154)||(25559080-25559148)
chr6 (16-154)||(14615361-14615499)
chr6 (84-156)||(19819834-19819906)
chr6 (86-154)||(29926618-29926686)
chr6 (86-149)||(25314803-25314866)
chr6 (86-149)||(26202297-26202360)
chr6 (87-149)||(8068852-8068914)
chr6 (16-109)||(8767136-8767230)
chr6 (73-151)||(19468798-19468876)
chr6 (84-154)||(19587728-19587799)
chr6 (16-109)||(8759375-8759469)
chr6 (73-119)||(24721594-24721640)
chr6 (80-153)||(18315109-18315181)
chr6 (67-119)||(23232544-23232597)
chr6 (86-154)||(2709317-2709385)
chr6 (86-154)||(4107511-4107579)
chr6 (80-119)||(22797651-22797690)
chr6 (67-116)||(10582536-10582585)
chr6 (86-154)||(14374518-14374587)
chr6 (87-119)||(17415005-17415037)
chr6 (86-154)||(30798843-30798911)
[»] scaffold0523 (1 HSPs)
scaffold0523 (61-225)||(6860-7025)
[»] scaffold0089 (1 HSPs)
scaffold0089 (86-225)||(17693-17831)
[»] scaffold1026 (1 HSPs)
scaffold1026 (86-225)||(106-244)
[»] scaffold0154 (1 HSPs)
scaffold0154 (67-225)||(17568-17725)
[»] scaffold0041 (1 HSPs)
scaffold0041 (14-153)||(50928-51068)
[»] chr2 (40 HSPs)
chr2 (9-154)||(23887454-23887599)
chr2 (9-154)||(70575-70720)
chr2 (9-154)||(21605670-21605815)
chr2 (9-154)||(4070602-4070747)
chr2 (82-225)||(32910624-32910766)
chr2 (9-76)||(21123145-21123212)
chr2 (9-154)||(24480658-24480805)
chr2 (86-224)||(36801409-36801546)
chr2 (9-181)||(1062601-1062773)
chr2 (9-181)||(1067995-1068167)
chr2 (61-149)||(17582598-17582687)
chr2 (62-154)||(22012252-22012345)
chr2 (86-154)||(27038168-27038236)
chr2 (87-225)||(15642438-15642574)
chr2 (73-154)||(35243687-35243768)
chr2 (87-154)||(20851116-20851183)
chr2 (87-149)||(30195653-30195715)
chr2 (86-154)||(19702629-19702697)
chr2 (14-139)||(20938520-20938645)
chr2 (87-154)||(11359381-11359449)
chr2 (86-154)||(27730413-27730481)
chr2 (16-156)||(24944299-24944439)
chr2 (84-153)||(24653289-24653358)
chr2 (84-153)||(24659746-24659815)
chr2 (57-149)||(27273080-27273174)
chr2 (86-154)||(34977-35045)
chr2 (86-154)||(22812954-22813022)
chr2 (84-154)||(20724974-20725045)
chr2 (62-116)||(25174868-25174922)
chr2 (9-51)||(42552801-42552843)
chr2 (87-148)||(20913470-20913530)
chr2 (84-153)||(23291897-23291966)
chr2 (84-153)||(23333537-23333606)
chr2 (73-154)||(44090215-44090296)
chr2 (86-154)||(4078346-4078414)
chr2 (79-119)||(25106597-25106637)
chr2 (86-149)||(11466951-11467014)
chr2 (86-149)||(14564760-14564823)
chr2 (79-153)||(25268175-25268249)
chr2 (84-149)||(23753765-23753830)
[»] scaffold0103 (2 HSPs)
scaffold0103 (16-157)||(20510-20652)
scaffold0103 (16-157)||(22932-23074)
[»] scaffold0001 (1 HSPs)
scaffold0001 (87-225)||(511754-511891)
[»] scaffold0088 (1 HSPs)
scaffold0088 (16-119)||(32531-32634)
[»] scaffold0190 (1 HSPs)
scaffold0190 (86-225)||(19289-19427)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-76)||(9199-9266)
[»] scaffold0118 (1 HSPs)
scaffold0118 (87-218)||(8024-8154)
[»] scaffold0560 (1 HSPs)
scaffold0560 (16-119)||(117-220)
[»] scaffold0555 (2 HSPs)
scaffold0555 (9-154)||(96-241)
scaffold0555 (80-153)||(2348-2420)
[»] scaffold0310 (1 HSPs)
scaffold0310 (16-149)||(17002-17134)
[»] scaffold0034 (2 HSPs)
scaffold0034 (82-225)||(9252-9395)
scaffold0034 (90-225)||(14824-14959)
[»] scaffold0706 (1 HSPs)
scaffold0706 (16-156)||(2443-2583)
[»] scaffold0096 (1 HSPs)
scaffold0096 (16-119)||(3870-3972)
[»] scaffold0191 (1 HSPs)
scaffold0191 (87-163)||(10668-10743)
[»] scaffold0102 (2 HSPs)
scaffold0102 (60-119)||(11443-11503)
scaffold0102 (67-153)||(30780-30867)
[»] scaffold0443 (1 HSPs)
scaffold0443 (87-154)||(14332-14399)
[»] scaffold0751 (1 HSPs)
scaffold0751 (63-119)||(1400-1456)
[»] scaffold0220 (1 HSPs)
scaffold0220 (86-153)||(11321-11388)
[»] scaffold0022 (3 HSPs)
scaffold0022 (44-149)||(105216-105320)
scaffold0022 (73-156)||(37803-37886)
scaffold0022 (73-156)||(135864-135947)
[»] scaffold0139 (1 HSPs)
scaffold0139 (84-153)||(26840-26909)
[»] scaffold0113 (3 HSPs)
scaffold0113 (86-163)||(16029-16105)
scaffold0113 (63-119)||(26752-26808)
scaffold0113 (86-163)||(20127-20203)
[»] scaffold0054 (1 HSPs)
scaffold0054 (80-153)||(59586-59658)
[»] scaffold0011 (6 HSPs)
scaffold0011 (84-153)||(252795-252864)
scaffold0011 (84-153)||(259401-259470)
scaffold0011 (84-153)||(186972-187041)
scaffold0011 (84-119)||(196598-196633)
scaffold0011 (23-119)||(155138-155233)
scaffold0011 (23-119)||(147951-148046)
[»] scaffold0076 (1 HSPs)
scaffold0076 (86-154)||(982-1050)
[»] scaffold0010 (2 HSPs)
scaffold0010 (84-156)||(43252-43324)
scaffold0010 (84-156)||(48318-48390)
[»] scaffold0301 (1 HSPs)
scaffold0301 (67-154)||(4172-4259)
[»] scaffold0066 (1 HSPs)
scaffold0066 (86-181)||(3179-3274)
[»] scaffold0430 (1 HSPs)
scaffold0430 (9-51)||(15110-15152)
[»] scaffold0106 (2 HSPs)
scaffold0106 (87-153)||(45909-45975)
scaffold0106 (87-153)||(50182-50248)
[»] scaffold0009 (2 HSPs)
scaffold0009 (87-157)||(254443-254513)
scaffold0009 (87-157)||(247931-248001)
[»] scaffold0192 (1 HSPs)
scaffold0192 (84-153)||(7553-7622)
[»] scaffold0091 (2 HSPs)
scaffold0091 (80-153)||(21906-21978)
scaffold0091 (80-153)||(26103-26175)
[»] scaffold0506 (1 HSPs)
scaffold0506 (86-154)||(9178-9246)
[»] scaffold0323 (1 HSPs)
scaffold0323 (86-154)||(8208-8276)
[»] scaffold0068 (2 HSPs)
scaffold0068 (87-163)||(51025-51100)
scaffold0068 (87-163)||(64473-64548)
[»] scaffold0060 (1 HSPs)
scaffold0060 (86-154)||(42103-42171)
[»] scaffold0015 (1 HSPs)
scaffold0015 (19-154)||(170892-171028)
[»] scaffold0004 (2 HSPs)
scaffold0004 (86-154)||(322025-322093)
scaffold0004 (90-154)||(327713-327777)
[»] scaffold0708 (1 HSPs)
scaffold0708 (147-218)||(2634-2704)
[»] scaffold0334 (1 HSPs)
scaffold0334 (63-154)||(9409-9500)
[»] scaffold0097 (1 HSPs)
scaffold0097 (84-154)||(28803-28874)
[»] scaffold0035 (2 HSPs)
scaffold0035 (63-154)||(1494-1585)
scaffold0035 (73-118)||(11410-11455)
[»] scaffold0019 (1 HSPs)
scaffold0019 (87-157)||(137997-138068)
[»] scaffold0214 (1 HSPs)
scaffold0214 (87-149)||(14389-14451)
[»] scaffold0211 (1 HSPs)
scaffold0211 (63-153)||(10334-10424)
[»] scaffold0173 (1 HSPs)
scaffold0173 (67-148)||(2258-2340)
[»] scaffold0466 (1 HSPs)
scaffold0466 (86-119)||(12049-12082)
[»] scaffold0320 (1 HSPs)
scaffold0320 (86-119)||(1854-1887)
[»] scaffold0243 (1 HSPs)
scaffold0243 (84-153)||(11470-11539)
[»] scaffold0167 (1 HSPs)
scaffold0167 (84-153)||(7890-7959)
[»] scaffold0050 (1 HSPs)
scaffold0050 (80-153)||(13781-13853)
[»] scaffold0017 (1 HSPs)
scaffold0017 (80-153)||(2097-2170)
[»] scaffold0002 (1 HSPs)
scaffold0002 (84-153)||(371348-371417)
[»] scaffold0923 (1 HSPs)
scaffold0923 (63-154)||(785-877)
[»] scaffold0244 (2 HSPs)
scaffold0244 (80-148)||(770-837)
scaffold0244 (80-148)||(14579-14646)
[»] scaffold0156 (1 HSPs)
scaffold0156 (63-119)||(26584-26639)
[»] scaffold0037 (1 HSPs)
scaffold0037 (86-154)||(100834-100901)
[»] scaffold0155 (1 HSPs)
scaffold0155 (86-149)||(31753-31816)
[»] scaffold0023 (1 HSPs)
scaffold0023 (86-153)||(19657-19724)
[»] scaffold0405 (2 HSPs)
scaffold0405 (87-153)||(2458-2524)
scaffold0405 (87-153)||(11166-11232)
[»] scaffold0205 (1 HSPs)
scaffold0205 (63-116)||(28249-28303)
[»] scaffold1290 (1 HSPs)
scaffold1290 (80-153)||(401-473)
[»] scaffold0661 (1 HSPs)
scaffold0661 (66-158)||(3181-3273)
[»] scaffold0583 (1 HSPs)
scaffold0583 (86-119)||(479-512)
[»] scaffold0114 (1 HSPs)
scaffold0114 (63-111)||(46975-47024)
[»] scaffold0003 (2 HSPs)
scaffold0003 (84-148)||(80304-80368)
scaffold0003 (84-148)||(100026-100090)
[»] scaffold0516 (1 HSPs)
scaffold0516 (66-153)||(7111-7199)
[»] scaffold0457 (1 HSPs)
scaffold0457 (86-154)||(11394-11462)
[»] scaffold0136 (1 HSPs)
scaffold0136 (87-119)||(3-35)
[»] scaffold0126 (1 HSPs)
scaffold0126 (87-119)||(29405-29437)
[»] scaffold0108 (1 HSPs)
scaffold0108 (80-116)||(46511-46547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (60-107)||(266102-266151)


Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 24009071 - 24008855
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24009071 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 24008972  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24008971 tcaatagtgtagattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 24008872  T
Q  209 tattgctgttttgatgt 225  Q
    |||||||||||||||||    
T  24008871 tattgctgttttgatgt 24008855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 10687163 - 10686947
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccattttt-gctgtgcattttcattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  10687163 aagctaagggagagaaaaccaggaacaagggagaagaaccaagggaatccattttttgctgtgcatttttattctgaactaaggtaagggtgaggtttac 10687064  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtag 207  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  10687063 ttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggggtag 10686965  T
Q  208 atattgctgttttgatgt 225  Q
    |||||| |||| ||||||    
T  10686964 atattgttgttctgatgt 10686947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 5455506 - 5455293
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5455506 aagccaagggagaggaaaccaggaacgagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 5455407  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||| ||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  5455406 tcattagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttggggtaga 5455308  T
Q  209 tattgctgttttgat 223  Q
    || || |||| ||||    
T  5455307 tactgttgttctgat 5455293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 43029982 - 43029844
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  43029982 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 43029884  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||||||||||||| ||||||||||| || ||||||    
T  43029883 gaatttatggtttttgggatagatattgctattctgatgt 43029844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 40010063 - 40010208
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40010063 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtggggtttact 40010162  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||| || ||||  | ||||||||||| ||||||||| |||||||||    
T  40010163 tcagtattgtagctattaaagtctgattttgagtttgacaggtttt 40010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 30782085 - 30781939
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30782085 aagccaagggagagaaaaccaggagcaagagagaagaaccagaggaacccctttttgctgtgcatttttcattctgaactaaggtaagggtgaggtttac 30781986  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| |||||| | ||||| |||||||||||||||||||    
T  30781985 ttcaatagtgtagattttagattctgattttgagtttaacaggtttt 30781939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 25847355 - 25847182
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  25847355 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttac 25847256  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||| | ||||  | ||||| ||||| |||| |||||||||  |||||| | ||| | | |||||||||||||    
T  25847255 ttcaagaatgtagttattaaattctgattttgtgtttaacagagttttggtgagaattggggaaattgggtttt 25847182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 25853928 - 25853763
Alignment:
Q  17 ggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaatag 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |     
T  25853928 ggagagaaaaccaggaagaagagagaagaaccaagggaatccatttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaagaa 25853829  T
Q  116 tgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||  | ||||| ||||| |||| |||||||||  |||||| | ||| | | |||||||||||||    
T  25853828 tgtagttattaaattctgattttgtgtttaacagagttttggtgagaattggggaaattgggtttt 25853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 14881404 - 14881549
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  14881404 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 14881502  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| |  ||||||||||| |||||||||||||||||||    
T  14881503 ttcaatagtgtagaaattaaagtctgattttgagtttaacaggtttt 14881549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 14888081 - 14888226
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  14888081 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 14888179  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| |  ||||||||||| |||||||||||||||||||    
T  14888180 ttcaatagtgtagaaattaaagtctgattttgagtttaacaggtttt 14888226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 14614040 - 14614185
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||    
T  14614040 aagccaaggaagagagaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttac 14614138  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||    
T  14614139 ttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 14614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20341478 - 20341341
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||  |||||||| | ||| |    
T  20341478 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgaatttaacagg-ttttggagtgaaattgaagaattgggtataaattg 20341380  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| | |||||||||||||||||||| |||| ||||||    
T  20341379 aattaagggtttttggggtagatattgttgttctgatgt 20341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20348082 - 20347945
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||  |||||||| | ||| |    
T  20348082 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgaatttaacagg-ttttggagtgaaattgaagaattgggtataaattg 20347984  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| | |||||||||||||||||||| |||| ||||||    
T  20347983 aattaagggtttttggggtagatattgttgttctgatgt 20347945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 22247328 - 22247473
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  22247328 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtggggtttac 22247426  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  22247427 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 22247473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 18567529 - 18567392
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||| |||| ||  ||||||  ||||| ||||||||||||||||||| |||||||||||||| |||||||| | | | |    
T  18567529 taaggtaagggtgaggtttacttcagtagtataggttttaatttctgattttgagtttaacaggtttt-ggagtgaaattgaggaattgggtataagttg 18567431  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  18567430 aattaatggtttttggggtagatattgttgttctgatgt 18567392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 28259025 - 28259231
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| |||||| |||||| |||||||  |||||| |||| ||||||||||||| ||||||||| ||||| ||||||||| ||    
T  28259025 gggagagaaaaccaggaacaagggagaaggaccaagagaatcca--tttgctttgcatttttcattctgaattaaggtaagagtgagttttacttcagta 28259122  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagt-gaaattgagaaattgggttttaatggaatttatggtttttggggtagatattg 213  Q
    || || || | ||| | ||||||  |||||||||||||||   ||| ||||||||| |||||||| |   | ||||| ||||||||||||||| ||||||    
T  28259123 gtatagatatgaaattatgaattgaagtttaacaggtttt---agtggaaattgaggaattgggtataggttgaattaatggtttttggggtaaatattg 28259219  T
Q  214 ctgttttgatgt 225  Q
     |||| ||||||    
T  28259220 ttgttctgatgt 28259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 38014751 - 38014609
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttc 110  Q
    |||| |||||||||||||| ||||||||| ||||||  |||| || |||||||||||||||| | |  | ||   |||||||||||||| ||||||||||    
T  38014751 aaggaagagaaaaccaggagcaagagagaggaaccagaggaacccctttttgctgtgcattt-cttcttcaatttctaaggtaagggtggggtttacttc 38014653  T
Q  111 aatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||| | |||||||||||| |||||||||||||||||||    
T  38014652 aatagtgtagaatttaaagtctgattttgagtttaacaggtttt 38014609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 7772745 - 7772877
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||| ||||||||| |||| |||||  |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||    
T  7772745 gggagagaaaaccaggaacaagggaggagaaccaagagaattcattt--gctgtgcatttttcattctgaattaaggtaagggtgaggtttgcttcagta 7772842  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacag 149  Q
    | ||| || ||||  ||| | ||||||||||||||    
T  7772843 gagtagatgttaatttctaattttgagtttaacag 7772877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 5337518 - 5337660
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||| | ||||||||| |||| || || | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||| |     
T  5337518 tgaattaaggtaagggtgggttttacttcagtagtatagatatgaaattctgaattggagtttaacaggtttttggtg-gaaattgagaaattgggtcta 5337616  T
Q  182 aatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |   ||||| ||||||||||| |||||||||| |||| ||||||    
T  5337617 agatgaattaatggtttttggagtagatattgttgttctgatgt 5337660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 598244 - 598168
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  598244 agaaccaagggaaccc-tttttgctgtgcatttctcattctgaattaaggtaagggtgaggtttacttcaatagtgta 598168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 22501944 - 22501855
Alignment:
Q  61 ttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| || | |||||  ||||||||||| ||||||||    
T  22501944 ttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcagtagtatagactttaatttctgaatttgaatttaacag 22501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 1110847 - 1110914
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||| ||||| | |||||||||||| |||||||||||||||||||    
T  1110847 taaggtaagggtggggtttacttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 1110914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 23560721 - 23560808
Alignment:
Q  67 tgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||  ||||||| ||| ||||||||||||||| |||||||||||||  ||||||| ||||| ||||||||||||| |||||    
T  23560721 tgtgcatttttcttctgaattaatgtaagggtgaggtttgcttcaatagtgtagtttttaaattctgattttgagtttaacaagtttt 23560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 19509121 - 19509040
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||  | || |  ||||| |||||||||||||||||||    
T  19509121 ttttcattctgaattaaggtaagggtgaggtttacttcaataatgtagttattgatttctgattttgagtttaacaggtttt 19509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 22508525 - 22508436
Alignment:
Q  61 ttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||| |||| || | |||||  ||||||||||| ||||||||    
T  22508525 ttttgttgtgcatttttcattctgaattaaggtaagggtgaggtttacttcagtagtatagactttaatttctgaatttgaatttaacag 22508436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 24799548 - 24799616
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| |||||||||||||||| || | |||||||||||| || ||||||||||||||||    
T  24799548 ctaaggtaagggtggggtttacttcaatagtatagaatttaaagtctgatttcgagtttaacaggtttt 24799616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 21889601 - 21889529
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||| || ||||| |||| |||||||||||||    
T  21889601 tctgaattaaggtaagggtgaggtttacttcagtagtgtagatttttaattctgattttg-gtttaacaggttt 21889529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 37575428 - 37575351
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||  | |||| || |||||||  ||||||||||||||||||||  ||||||||||||    
T  37575428 ctaaggtaagggtgaggtttactcaagtagtatagattttaatttctgaatttgagtttaacagagttttggagtgaa 37575351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 18940383 - 18940450
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||| |||||||||||||  | ||||  ||||| |||||||||||||||||||    
T  18940383 taaggtaagggtgaggtttgcttcaatagtgtagttattaatttctgattttgagtttaacaggtttt 18940450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 428243 - 428186
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  428243 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 15193131 - 15193203
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| ||||||| || || || ||||| |||| |||||||||||||    
T  15193131 tctgaattaaggtaagggtgaggtttacttcagtagtgtagatgtttaattctgattttg-gtttaacaggttt 15193203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 19799508 - 19799576
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| |||||  | || |  ||||| |||||||||||||||||||    
T  19799508 ctaaggtaagggtgaggtttacttcaattgtgtagttattgatttctgattttgagtttaacaggtttt 19799576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 29745761 - 29745821
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaa 146  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||||||||| |||||    
T  29745761 ctaaggtaagggtgaggtttacttcagtagtatagattttaatttctgaatttgaatttaa 29745821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 33537035 - 33536967
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||| ||  | || |  ||||| |||||||||||||||||||    
T  33537035 ctaaggtaagggtgaggtttacttcaatagtatagttattgatttctgattttgagtttaacaggtttt 33536967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 15462411 - 15462344
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||| ||||||  | ||||| ||||| ||||  |||||||||||||    
T  15462411 taaggtaagggtgaggtttacttcaagagtgtagttattaaattctgattttgtatttaacaggtttt 15462344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 19799039 - 19799109
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||||||||||    
T  19799039 ctaaggtaagggtgaggtttgcttcagtagtatagatgttaat-tctgattttgagtttaacaggtttttgg 19799109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 23544029 - 23544096
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||| ||||| |||| || ||| |||| ||||| |||||||||||||| ||||    
T  23544029 taaggtaagggtgaggtttgcttcagtagtatagattctaaattctgattttgagtttaacagttttt 23544096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 23075458 - 23075530
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    |||||||||||||||||||| ||||| |||| || || ||||  ||||| |||||||||||||| ||||||||    
T  23075458 ctaaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacagagtttttgg 23075530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 23081171 - 23081243
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    |||||||||||||||||||| ||||| |||| || || ||||  ||||| |||||||||||||| ||||||||    
T  23081171 ctaaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacagagtttttgg 23081243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 18819923 - 18819827
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtt 179  Q
    |||||| ||||||||||||||||||| ||||||| ||||| ||| | || |||||||||| |||||||| |||| |||   ||||||| |||||||||||    
T  18819923 tctgaattaaggtaagggtgaggtttgcttcaatggtgtagattgt-aattctgaatttg-gtttaacatgtttctgg-tagaaattgggaaattgggtt 18819827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 21830556 - 21830469
Alignment:
Q  67 tgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||| || ||||||| ||||||||||||||| ||| |||||||||||||  |  | || ||||| ||||| ||||||||||||    
T  21830556 tgtgcatttgtctttctgaattaaggtaagggtgagatttgcttcaatagtgtagttaatgaattctgattttgattttaacaggttt 21830469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 22231864 - 22231934
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||| ||||||||||| |||||||||||||  | || || ||||| ||| ||||||||| |||||    
T  22231864 aactaaggtaggggtgaggttttcttcaatagtgtagctattcaattctgattttcagtttaacaagtttt 22231934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 22237017 - 22237087
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||| |||||||||| |||||||||||||  | || || ||||| ||| ||||||||| |||||    
T  22237017 aactaaggtaatggtgaggtttgcttcaatagtgtagctattcaattctgattttcagtttaacaagtttt 22237087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 26651382 - 26651320
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||| |||||||||||||| ||  | ||||  ||||| ||||||||||||||    
T  26651382 taaggtaagggtgagttttacttcaatagtatagttattaatttctgattttgagtttaacag 26651320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 26922967 - 26922905
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||| |||||||||||||| ||  | ||||  ||||| ||||||||||||||    
T  26922967 taaggtaagggtgagttttacttcaatagtatagttattaatttctgattttgagtttaacag 26922905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 6403651 - 6403716
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| |||||||||| |||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  6403651 aaggtaaaggtgaggtttgcttcaatagtgtagttgataaattctgattttgattttaacaggttt 6403716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 16774219 - 16774284
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||| |||||||| ||||| |||| || |||||||  ||||| |||| |||||||||    
T  16774219 aactaaggtaaggatgaggtttgcttcagtagtatagattttaatttctgattttgtgtttaacag 16774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 5581456 - 5581524
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  ||||||| |||||    
T  5581456 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaagtttt 5581524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 30344698 - 30344738
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| | ||||||||||||||||| |||||||||||||    
T  30344698 ttctgaattcaggtaagggtgaggtttgcttcaatagtgta 30344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 21353237 - 21353021
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21353237 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 21353138  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21353137 tcaatagtgtagattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 21353038  T
Q  209 tattgctgttttgatgt 225  Q
    |||||||||||||||||    
T  21353037 tattgctgttttgatgt 21353021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 2498141 - 2498357
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2498141 aagccaagggagagaaaaccaggagcaagagagaagaaccagaggaacccctttttgctgtgcatttttcattctgaactaaggtaagggtgaggtttac 2498240  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtag 207  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||  |||| ||| | ||| ||||| ||||||||||||||||    
T  2498241 ttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggtgtgaaattgatgaattaggtataaattgaattaatggtttttggggtag 2498339  T
Q  208 atattgctgttttgatgt 225  Q
    ||||||||||| ||||||    
T  2498340 atattgctgttctgatgt 2498357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 54832307 - 54832448
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  54832307 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttttcattttgaattaaggtaagggtgaggtttac 54832406  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||| |||||||| ||||| |||| |||||||||    
T  54832407 ttcaatagtgtagattttaaattctgattttgtgtttaacag 54832448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 46070218 - 46070424
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||| ||||| ||||||||| ||    
T  46070218 gggagagaaaaccaggaacaagggaggagaaccaagagaatccattt--gctgtgcatttttcattctgaattaaggtaagagtgagttttacttcagta 46070315  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagt-gaaattgagaaattgggttttaatggaatttatggtttttggggtagatattg 213  Q
    || || || | ||| |||||||| |||||||||||||||    ||| ||||||||| |||||||| | | | ||||| ||||||||||||||||||||||    
T  46070316 gtatagatatgaaattctgaattggagtttaacaggttt---cagtggaaattgaggaattgggtataagttgaattaatggtttttggggtagatattg 46070412  T
Q  214 ctgttttgatgt 225  Q
    ||||| ||||||    
T  46070413 ctgttctgatgt 46070424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 28759910 - 28759775
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||     
T  28759910 agagaaaaccaggagcaagagagaagaaccagaggaa-ccttttttgctgtgcaattttcattctgaattaaggtaagggtggggtttacttcaatagta 28759812  T
Q  118 tacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || | |||||||||||| |||||||||||||||||||    
T  28759811 tagaatttaaagtctgattttgagtttaacaggtttt 28759775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 43723198 - 43723333
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||    
T  43723198 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcaattttcattctgaattaaggtaagggtggggtttacttcaatggtg 43723296  T
Q  118 tacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || | |||||||||||| |||||||||||||||||||    
T  43723297 tagaatttaaagtctgattttgagtttaacaggtttt 43723333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 14844262 - 14844407
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| |||||||||||||| |  |||| || || |||||||||||||| ||||||||||||||||||||||| |||||||    
T  14844262 aagccaaggaagagaaaaccaggagcaagagagaagaactagaggaaccccttgttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 14844361  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| | |||||||||||| |||||| ||||||||||||    
T  14844362 ttcaatagtgtagaatttaaagtctgattttgag-ttaacaggtttt 14844407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 50141878 - 50142013
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||  ||||||||||||||||  |||| || ||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||    
T  50141878 agagaaaaccaggggcaagagagaagaaccagaggaaccc-tttttgctgtgcaattttcattctgaattaaggtaagggtggggtttacttcaatggtg 50141976  T
Q  118 tacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || | |||||||||||| |||||||||||||||||||    
T  50141977 tagaatttaaagtctgattttgagtttaacaggtttt 50142013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 20376350 - 20376556
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||  |||||||||||| ||||||||| ||| ||||||||||| ||||||||| ||    
T  20376350 gggagagaaaaccaggaacaagggaggcgaaccaagagaatccattt--gctgtgcatttttcattctgaattaatgtaagggtgagttttacttcagta 20376447  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagt-gaaattgagaaattgggttttaatggaatttatggtttttggggtagatattg 213  Q
    || ||  | | ||| |||||||| ||||||||||||||||   ||| | ||||||| |||||||| |   | ||||| ||||||||||||||||||||||    
T  20376448 gtatagttatgaaattctgaattggagtttaacaggtttt---agtgggaattgaggaattgggtataggttgaattaatggtttttggggtagatattg 20376544  T
Q  214 ctgttttgatgt 225  Q
    ||||| ||||||    
T  20376545 ctgttatgatgt 20376556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 50655156 - 50655251
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  50655156 tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttacttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 50655251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 9690575 - 9690707
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  | |||||||||| ||||||||| ||||||||| ||||| ||||||||| ||    
T  9690575 gggagagaaaaccaggaacaagggagaagaaccaagagaatccattt--gatgtgcatttttcattctgaattaaggtaagagtgagatttacttcagta 9690672  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||| || ||||  ||||| ||||||||||||||    
T  9690673 gtgtagatgttaatttctgattttgagtttaacag 9690707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 225
Target Start/End: Complemental strand, 29551969 - 29551771
Alignment:
Q  24 aaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacat 122  Q
    |||||| ||||||| |||||||| |||| |||| || || |  |||||||||| ||||||||| ||||||||||||||| ||||||||| |||| || ||    
T  29551969 aaaccaagaacaagggagaagaatcaagagaattcaattgt--tgtgcatttttcattctgaattaaggtaagggtgagttttacttcagtagtatagat 29551872  T
Q  123 tttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctgttttga 222  Q
     | ||| |||||||| |||||||||||| |||||| | ||||||||| ||||| || | | | ||||| |||||||||||||||||||||| ||||||||    
T  29551871 atgaaattctgaattggagtttaacagg-ttttggtg-gaaattgaggaattgagtataagttgaattaatggtttttggggtagatattgatgttttga 29551774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 32387190 - 32387332
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||| | ||||||||| |||| || || | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||| |     
T  32387190 tgaattaaggtaagggtgggttttacttcagtagtatagatatgaaattctgaattggagtttaacaggtttttggtg-gaaattgagaaattgggtcta 32387288  T
Q  182 aatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |   ||||| ||||||||||||||||||||||||||| ||||||    
T  32387289 agatgaattaatggtttttggggtagatattgctgttatgatgt 32387332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 3109518 - 3109414
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  3109518 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 3109420  T
Q  108 ttcaat 113  Q
    ||||||    
T  3109419 ttcaat 3109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 30596037 - 30596173
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtga-aattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||  | ||||  ||||| |||||||||||||||||||   | ||| || ||||||||||||| | |       
T  30596037 taaggtaagggtgaggtttacttcaatagtgtagttattaatttctgattttgagtttaacaggtttt---actgagaactgagaaattgggtataagat 30596133  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  30596134 gaattaatggtttttggggtagatattgctgttttgatgt 30596173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 16413415 - 16413482
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttca 111  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16413415 agaacccagagaatccatttt-gctgtgcattttcattctgaactaaggtaagggtgaggtttacttca 16413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 18135419 - 18135555
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| |||| || ||||||||||| ||||  |||||| |||||  |||||   |||||||||||||||||||||||||||||    
T  18135419 gggagagaaaaccaagaacaagggagaggagccaagggaatcgattt--gctgtgtatttt--ttctgcaaaactaaggtaagggtgaggtttacttcaa 18135514  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| ||  | || ||||| ||||| ||||||||||||    
T  18135515 tagtgtagatgattaattctgattttgattttaacaggttt 18135555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 29494530 - 29494462
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||| ||||||||    
T  29494530 ctaaggtaagggtggggtttacttcaatagtgtagaatttaaagtctgattttgagtttagcaggtttt 29494462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 51246718 - 51246650
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||| ||||||||||| |||||||    
T  51246718 ctaaggtaagggtgaggtttacttcaatagtatagaatttaaagtctgattttgagtttaataggtttt 51246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 51854279 - 51854341
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  51854279 taaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgtgtttaacag 51854341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 53570408 - 53570470
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  53570408 taaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgtgtttaacag 53570470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 54090911 - 54090987
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||| ||||||||||||    
T  54090911 ctaaggtaagggtgaggtttacttcagtagtatagattttaatttctgattttgagtttaacagg-ttttggagtgaa 54090987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 12203380 - 12203279
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||| ||||||| ||||||| ||||| ||||||| ||  | |||||||||| | ||||||| ||||||||| ||||||||| ||||||||    
T  12203380 gggagagaaaaccaagaacaagggagaagagccaagagaatccaatt--gatgtgcatttttccttctgaattaaggtaagcgtgaggtttgcttcaata 12203283  T
Q  115 gtgt 118  Q
    ||||    
T  12203282 gtgt 12203279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 12355178 - 12355250
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| |||||||||||||||    
T  12355178 aactaaggtaagggtgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaggtttttg 12355250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 18127649 - 18127785
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaa 112  Q
    |||||| |||| || ||||||| |||| || ||||||||||| ||||  |||||| |||||  |||||   |||||||||||||||||||||||||||||    
T  18127649 gggagaaaaaatcaagaacaagggagaggagccaagggaatcgattt--gctgtgtatttt--ttctgcaaaactaaggtaagggtgaggtttacttcaa 18127744  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| ||  | || ||||| ||||| ||||||||||||    
T  18127745 tagtgtagatgattaattctgattttgattttaacaggttt 18127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 10382915 - 10382848
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||  ||||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  10382915 taaggtaagggtagggtttacttcaatagtgtagattttagattctgattttgagtttaacaggtttt 10382848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 47122187 - 47122052
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaac---taaggtaagggtgaggtttacttcaatag 115  Q
    |||||||||||||| ||||||||||||||||  |||| || |||||||||  |||||   ||||| |    ||||||||||||| | |||||||||||||    
T  47122187 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgcacatttc--ttctgcaaatttaaggtaagggtgggatttacttcaatag 47122091  T
Q  116 tgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| |||||| | ||||| ||||||||| |||||||||    
T  47122090 tgtagattttagattctgattttgagtttgacaggtttt 47122052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 47129555 - 47129420
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaac---taaggtaagggtgaggtttacttcaatag 115  Q
    |||||||||||||| ||||||||||||||||  |||| || |||||||||  |||||   ||||| |    ||||||||||||| | |||||||||||||    
T  47129555 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgcacatttc--ttctgcaaatttaaggtaagggtgggatttacttcaatag 47129459  T
Q  116 tgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| |||||| | ||||| ||||||||| |||||||||    
T  47129458 tgtagattttagattctgattttgagtttgacaggtttt 47129420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 21150662 - 21150730
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||| ||||||||| |||||||||    
T  21150662 ctaaggtaagggtgaggtttacttcagtattgtagctattaaagtctgattttgagtttgacaggtttt 21150730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 11304910 - 11304985
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgtacat-tttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||  |||||  |||| ||||| ||||||||||||    
T  11304910 ttctgaattaaggtaagggtgaggtttacttcaatagtgtagatggttaaatcctgattttgattttaacaggttt 11304985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 11964084 - 11964155
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttttt 155  Q
    |||||||||||||||||||||||||||||| ||||| ||| | || ||||| ||||| |||||||| |||||    
T  11964084 aactaaggtaagggtgaggtttacttcaattgtgtagattctgaattctgattttgattttaacagcttttt 11964155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 15519504 - 15519435
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||| |||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  15519504 aactaaggtaagggtgaggtttgcttcaatagtgtagttgataaattctgattttgattttaacaggttt 15519435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 18961932 - 18961864
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||||||||||||||||| |||||||||| || || || || ||||| ||||||||||||||||||||||    
T  18961932 aaggtaagggtgaggtttgcttcaatagtatagatgtt-aattctgattttgagtttaacaggtttttgg 18961864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 9771094 - 9771162
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||   | || |  ||||| |||||||||||||||||||    
T  9771094 ctaaggtaagggtgaggtttacttcaatagtgttgttattgatttctgattttgagtttaacaggtttt 9771162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 11939058 - 11939130
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||||| |||||||||||||||||||||| ||||| ||| | || ||||| ||| | |||||||||||||||    
T  11939058 aactaagttaagggtgaggtttacttcaattgtgtagattctgaattctgatttttattttaacaggtttttg 11939130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 12478852 - 12478924
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||||||||| ||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||| |||||||    
T  12478852 aactaaggtacgggtgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaagtttttg 12478924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 14293739 - 14293671
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||| |||| || || ||| | || ||||| |||||||||||||||||||    
T  14293739 ctaaggtaagggtgaggtttactgcaattgtatagattctgaattctgattttgagtttaacaggtttt 14293671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 14299366 - 14299298
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||| |||| || || ||| | || ||||| |||||||||||||||||||    
T  14299366 ctaaggtaagggtgaggtttactgcaattgtatagattctgaattctgattttgagtttaacaggtttt 14299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 38743887 - 38743820
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||| ||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  38743887 taaggtaaggatgaggtttacttcaatagtgtatttattgatttctgattttgagtttaacaggtttt 38743820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 48773793 - 48773856
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||||||  |  |||  ||||||||||| ||||||||    
T  48773793 ctaaggtaagggtgaggtttacttcaatagtgtagttactaatttctgaatttgaatttaacag 48773856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 13692980 - 13692926
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||    
T  13692980 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcaatagt 13692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 8373096 - 8373161
Alignment:
Q  89 aggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||| ||||||| || ||||  ||||| ||||| |||||||||||||    
T  8373096 aggtaagggtgaggtttgcttcagtagtgtaaatgttaatttctgattttgaatttaacaggtttt 8373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 12361676 - 12361749
Alignment:
Q  84 aactaaggtaagggt-gaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||||||||| |||| ||||||||||||||||||||| ||  | || ||||| ||||| |||||||||||||||    
T  12361676 aactaaggtatgggttgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaggtttttg 12361749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 19343444 - 19343505
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||| |||||||||||||  | ||||  ||||| ||||||||||||||    
T  19343444 aaggtaagggtgaggtttgcttcaatagtgtagttattaatttctgattttgagtttaacag 19343505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 12536872 - 12536912
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  12536872 ttctgaattaaggtaagggtgaggtttgcttcaatagtgta 12536912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 45612630 - 45612562
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  |||||||||||||    
T  45612630 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggtttt 45612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 891704 - 891795
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattggg 177  Q
    ||||||||||||||||||||||||||| | ||||  | || || ||||| |||| |||||||||  |||||| | | ||||||||| |||||    
T  891704 ctaaggtaagggtgaggtttacttcaagaatgtagttattgaattctgattttgtgtttaacagagttttggtgaggaattgagaatttggg 891795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 2269383 - 2269476
Alignment:
Q  63 ttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||  |||||   ||||||||||||| |||||||| |||||||||||||  |  | || ||||| ||||| ||||||||||||    
T  2269383 ttgctgtgcattttttttctgcaaaactaaggtaaggatgaggtttgcttcaatagtgtagttaatgaattctgattttgattttaacaggttt 2269476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 6926794 - 6926857
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||| ||||||||||||||||||  | || || ||||| |||| |||||||||    
T  6926794 ctaaggtaagggtgaagtttacttcaatagtgtagttattgaattctgattttgtgtttaacag 6926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 11963326 - 11963397
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| |||||||||||||| ||||||||    
T  11963326 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacagagtttttgg 11963397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 12724307 - 12724378
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || |  ||||  |||||||||||||||||||| ||||||||    
T  12724307 taaggtaagggtgaggtttgcttcagtagtatagagattaatttctgaatttgagtttaacagagtttttgg 12724378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 12960545 - 12960616
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||| ||||| |||| || ||| | || |||||  |||||||||||||||||||    
T  12960545 aactaaggtaagggtgaggtttgcttcattagtatagattctgaattctgatttttgagtttaacaggtttt 12960616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 15081370 - 15081303
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| ||||  |  | |  ||||| |||||||||||||||||||    
T  15081370 taaggtaagggtgaggtttacttcaataatgtagttactgatttctgattttgagtttaacaggtttt 15081303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 49164141 - 49164070
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttga-gtttaacaggtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||| |||||||||||||||||    
T  49164141 taaggtaagggtgaggtttgcttcagtagtatagatgttaatctctgattttgatgtttaacaggtttttgg 49164070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 10596825 - 10596899
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||| ||||||||||||||| ||||||||| |||| || || ||  | ||||| ||||| |||||||||||||||    
T  10596825 tgaattaaggtaagggtgagttttacttcagtagtatagatattggattctgattttgattttaacaggtttttg 10596899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 12153913 - 12153871
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggttt 105  Q
    ||||||||||||||  ||||||| |||||||||||||||||||    
T  12153913 ttgctgtgcatttttcttctgaattaaggtaagggtgaggttt 12153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 17497237 - 17497188
Alignment:
Q  63 ttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttca 111  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  17497237 ttgctgtgcatttgtctttctgaattaaggtaagggtgaggtttgcttca 17497188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 53871821 - 53871854
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||| |||||||||||||||||||||||    
T  53871821 ctaaggtaagagtgaggtttacttcaatagtgta 53871854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 10423706 - 10423674
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||| |||||||||||||||||||    
T  10423706 taaggtaagggtggggtttacttcaatagtgta 10423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 14570841 - 14570742
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggt 178  Q
    ||||||| ||||||||||||||||||| ||||| |||  || || || || ||||| |||| ||||||||||||| ||||   |||||| ||| ||||||    
T  14570841 ttctgaattaaggtaagggtgaggtttgcttcagtagaatagatattgaattctgattttg-gtttaacaggtttctggatgaaaattgggaatttgggt 14570743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 14735881 - 14736097
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14735881 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcgttctgaactaaggtaagggtgaggtttact 14735980  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14735981 tcaatagtgtagatttcaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaattgaatttatggtttttggggtaga 14736080  T
Q  209 tattgctgttttgatgt 225  Q
    ||||||| |||||||||    
T  14736081 tattgctcttttgatgt 14736097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 16886359 - 16886574
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16886359 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgatgtttact 16886458  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| |||||||||||||| ||||| |||||||||  ||||||||||||||||  ||||| || ||||| |||||||||||||||||||||||    
T  16886459 tcaatagtgtagattttaaagtctgattttgattttaacagg-ctttggagtgaaattgaagaattgagtattaattgaatttatggtttttggggtaga 16886557  T
Q  209 tattgctgttttgatgt 225  Q
    || ||||||| ||||||    
T  16886558 tactgctgttctgatgt 16886574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 23223759 - 23223974
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||| ||||||||||||||||||||||| ||  |||| || ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  23223759 aagccaagggagaggaaaccaggaacaagagagaagaatcagaggaaccc-tttttgctgtgcatttttcattctaaattaaggtaagggtgaggtttac 23223857  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtag 207  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||| | ||| |||||  ||||||||||||| |    
T  23223858 ttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggagtgaaattgaagaattgggtataaattgaattattggtttttggggtgg 23223956  T
Q  208 atattgctgttttgatgt 225  Q
    ||| ||||||| ||||||    
T  23223957 atactgctgttctgatgt 23223974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 10955824 - 10955962
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| | |||     
T  10955824 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgtgtttaacagg-ttttggagtgaaattgaggaattgggtataaatt 10955922  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  10955923 gaattaatggtttttggggtagatattgctgttgtgatgt 10955962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 26485154 - 26485291
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||  |||||||| ||||| |    
T  26485154 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttagagtgaaattgaagaattgggtattaattg 26485252  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  26485253 aattaatggtttttggggtagatattgctgttctgatgt 26485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 14745657 - 14745795
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| | |||     
T  14745657 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgagtttaacagg-ttttggagtgaaattgaggaattgggtataaatt 14745755  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| |||||||||||||||||||||| |||| ||||||    
T  14745756 gaattaatggtttttggggtagatattgttgttctgatgt 14745795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 16265964 - 16266138
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgag 141  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  16265964 agaaccaagggaaccc-tttttgctgtgcatttctcattctgaattaaggtaagggtgaggtttacttcaatagtgtagattttaatttctgattttgag 16266062  T
Q  142 tttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctgtt 218  Q
    ||||||||| ||||| |||||||||| | |||||||| | | |  |||| ||| |||||||||||||||||||||||    
T  16266063 tttaacagg-ttttgaagtgaaattggggaattgggtataagttaaattaatgatttttggggtagatattgctgtt 16266138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 9204422 - 9204557
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  9204422 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcaattttcattctgaattaaggtaagggtggggtttacttcaatagtg 9204520  T
Q  118 tacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || | |||||||||||| |||||||||||||||||||    
T  9204521 tagaatttaaagtctgattttgagtttaacaggtttt 9204557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 3223744 - 3223887
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||| |||||||||||||| |||||||||||  |||| || ||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  3223744 aagccaagggagaggaaaccaggaacaagggagaagaaccagaggaaccc-tttttgctgtgcatttttcattatgaattaaggtaagggtgaggtttac 3223842  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtt 152  Q
    |||||||||||| |||||| | ||||| |||||||||||||||||    
T  3223843 ttcaatagtgtagattttagattctgattttgagtttaacaggtt 3223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 14766658 - 14766513
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | ||| |    
T  14766658 aagccaaggaagagagaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttcc 14766560  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||    
T  14766559 ttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 14766513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 40143480 - 40143617
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||| ||||| |||||||||||| |||||||| | | | |    
T  40143480 taaggtaagggtgaggtttacttcaatagtgtagattttaatttctgattttgagtttaacagg-ttttgaagtgaaattgaggaattgggtataagttg 40143578  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  40143579 aattaatggtttttggggtagatattgttgttctgatgt 40143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 10947742 - 10947880
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||| || |||||||||||||||| ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| | |||     
T  10947742 ctaaggtacggttgaggtttacttcaattgtgtagattttaaagtctgattttgtgtttaacagg-ttttggagtgaaattgaggaattgggtataaatt 10947840  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| ||| ||||||||||||||||| || || ||||||    
T  10947841 gaattaatgttttttggggtagatattactattgtgatgt 10947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 28981792 - 28981652
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaa 112  Q
    |||| |||||||||||||| |||||||||||||| |  |||| ||  | ||||||||||||| |||||||||||||||||||||||| |||||||||||     
T  28981792 aaggaagagaaaaccaggagcaagagagaagaactagaggaa-cccctgttgctgtgcatttgtcattctgaactaaggtaagggtggggtttacttcat 28981694  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || |||| | |||||||||||| |||||||||||||||||||    
T  28981693 taatgtagaatttaaagtctgattttgagtttaacaggtttt 28981652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 28987012 - 28986872
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaa 112  Q
    |||| |||||||||||||| |||||||||||||| |  |||| ||  | ||||||||||||| |||||||||||||||||||||||| |||||||||||     
T  28987012 aaggaagagaaaaccaggagcaagagagaagaactagaggaa-cccctgttgctgtgcatttgtcattctgaactaaggtaagggtggggtttacttcat 28986914  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || |||| | |||||||||||| |||||||||||||||||||    
T  28986913 taatgtagaatttaaagtctgattttgagtttaacaggtttt 28986872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 14568098 - 14567953
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||| ||||||  |||| || |||| |||||||||||| ||||||||||||||||||||||||||||| |    
T  14568098 aagccaaggaagagaaaaccaggagcaagagagaggaaccagaggaacccctttt-gctgtgcatttttcattctgaactaaggtaagggtgaggtttgc 14568000  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| |||| || |  ||||  ||||| ||||| |||| ||||||||    
T  14567999 ttcagtagtatagacattaatctctgattttgaatttatcaggtttt 14567953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 1051633 - 1051566
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  1051633 taaggtaagggtggggtttacttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 1051566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 14564553 - 14564420
Alignment:
Q  21 agaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||| ||||||||| ||||||  |||| || |||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||| ||    
T  14564553 agaaaaccaggagcaagagagaggaaccagaggaacccctttt-gctgtgcatttttcattctgaactaaggtaagggtgaggtttgcttcagtagtata 14564455  T
Q  120 cattttaaagtctgaatttgagtttaacaggtttt 154  Q
     |  ||||  ||||| ||||| |||| ||||||||    
T  14564454 gacattaatctctgattttgaatttatcaggtttt 14564420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 11391745 - 11391821
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||| ||||||||||||    
T  11391745 ctaaggtaagggtgaggtttacttcagtagtataaattttaatttctgattttgagtttaacagg-ttttggagtgaa 11391821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 43688380 - 43688304
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||| ||||||||||||    
T  43688380 ctaaggtaagggtgaggtttacttcagtagtatagattttaatttctgattttgagtttaacagg-ttttggagtgaa 43688304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 7003209 - 7003276
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||  | || || ||||| |||||||||||||||||||    
T  7003209 taaggtaagggtgaggtttacttcaatagtgtagttattgaattctgattttgagtttaacaggtttt 7003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 19987329 - 19987398
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  19987329 aactaaggtaagggtgaggtttacttcaatagtgtagttgataaattctgattttgattttaacaggttt 19987398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 20258147 - 20258216
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| |||||||||||||||    
T  20258147 taaggtaagggtgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaggtttttg 20258216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 21044777 - 21044846
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| |||||||||||||||    
T  21044777 taaggtaagggtgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaggtttttg 21044846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 27346668 - 27346587
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  | || |  ||||| |||||||||||||| ||||    
T  27346668 ttttcattctgaattaaggtaagtgtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacagatttt 27346587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 6589061 - 6588993
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  6589061 ctaaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 6588993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 25700753 - 25700829
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||| ||||||| || |||| || |||||||  ||||||||||||||||||||  ||||||||||||    
T  25700753 taaggtaagggtgacgtttactccagtagtatagattttaatttctgaatttgagtttaacagagttttggagtgaa 25700829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 20004849 - 20004914
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||| ||||||| ||||| || ||||| |||| |||||||||||||    
T  20004849 taaggtaagggtgaggtttacttcagtagtgtagatttttaattctgattttg-gtttaacaggttt 20004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 27364315 - 27364223
Alignment:
Q  62 tttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| |  ||||||||  | || |  ||||| |||||||||||||||||||    
T  27364315 tttgctgtgcatttttcattctgaattaaggtaagggtgaggtttac-tatatagtgtagttattgatttctgattttgagtttaacaggtttt 27364223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 19297512 - 19297449
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || |||| ||  ||||| ||||||||||||||    
T  19297512 ctaaggtaagggtgaggtttacttcagtagtatagatttcaatttctgattttgagtttaacag 19297449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 23118171 - 23118108
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||||||  |  |||  ||||||||||| ||||||||    
T  23118171 ctaaggtaagggtgaggtttacttcaatagtgtagttactaatttctgaatttgaatttaacag 23118108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 29304767 - 29304830
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||| |||| ||||||||||||| || ||||  ||||| ||||||||||||||    
T  29304767 ctaaggtaagggtgaagtttgcttcaatagtgtagatgttaatttctgattttgagtttaacag 29304830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 35542003 - 35541964
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaa 112  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  35542003 ttttcattctgaattaaggtaagggtgaggtttacttcaa 35541964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 12304185 - 12304131
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttga 140  Q
    ||||||||||||||||||||||||||||||||||  | ||||  |||||||||||    
T  12304185 ctaaggtaagggtgaggtttacttcaatagtgtagttattaatttctgaatttga 12304131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 21685213 - 21685286
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| |||| || || |  || ||||| |||| |||||||||||||    
T  21685213 tctgaattaaggtaagggtgaggtttacttcagtagtatatatgtctaattctgattttgggtttaacaggttt 21685286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 21689562 - 21689635
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| |||| || || |  || ||||| |||| |||||||||||||    
T  21689562 tctgaattaaggtaagggtgaggtttacttcagtagtatatatgtctaattctgattttgggtttaacaggttt 21689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 19860562 - 19860482
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| ||  | || || ||||| ||||| || |||||||||    
T  19860562 ttttccttctgaattaaggtaagggtgaggtttgcttcaatagtatagttattgaattctgattttgatttgaacaggttt 19860482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 13361295 - 13361362
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  ||||||||||||    
T  13361295 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggttt 13361362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 29298212 - 29298275
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||| ||| |||| ||||||||||||| || ||||  ||||| ||||||||||||||    
T  29298212 ctaaggtaaggctgaagtttgcttcaatagtgtagatgttaatttctgattttgagtttaacag 29298275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 29329187 - 29329124
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||| ||||| ||||||| || ||||  ||| | ||||||||||||||    
T  29329187 ctaaggtaagggtgaggtttgcttcagtagtgtagatgttaatttctaattttgagtttaacag 29329124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 37240571 - 37240504
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  ||||||||||||    
T  37240571 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggttt 37240504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 20007295 - 20007182
Alignment:
Q  66 ctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaa 164  Q
    |||||||||| || ||||||| ||||||||||||||||||| ||||| |||| || || || || ||| |||||  ||||||||||||| ||||   |||    
T  20007295 ctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagtatagatattgaattct-aattttggtttaacaggtttctggatgaaaa 20007197  T
Q  165 ttgagaaattgggtt 179  Q
    ||| ||| |||||||    
T  20007196 ttgggaatttgggtt 20007182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 25623794 - 25623870
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttac-ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||||||||||||||||||||||||||| ||||||||| || ||| | || ||||| |||| |||||||| ||||||||    
T  25623794 tctgaactaaggtaagggtgaggtttactttcaatagtatagattgt-aattctgattttg-gtttaacatgtttttgg 25623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 31411649 - 31411717
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||| ||||||||| |||| ||  | || || ||||| ||||||||||| |||||||    
T  31411649 ctaaggtaagggtgagttttacttcagtagtataggtattgaattctgattttgagtttaataggtttt 31411717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 31417831 - 31417899
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||| ||||||||| |||| ||  | || || |||||  ||||||||||||||||||    
T  31417831 ctaaggtaagggtgagttttacttcagtagtataggtattgaattctgatattgagtttaacaggtttt 31417899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 6e-98; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 50083236 - 50083021
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50083236 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 50083137  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  50083136 tcaatagtgtagattttaaagtctg-atttgagtttaacaggtttttggagtgaaattgaagaattgggttttaattgaatttatggtttttggggtaga 50083038  T
Q  209 tattgctgttttgatgt 225  Q
    || ||||||| ||||||    
T  50083037 tactgctgttctgatgt 50083021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 3265685 - 3265893
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  3265685 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 3265781  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  3265782 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 3265880  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  3265881 agatattgctgtt 3265893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 49239910 - 49240118
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  49239910 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 49240006  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  49240007 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 49240105  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  49240106 agatattgctgtt 49240118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 49748624 - 49748832
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  49748624 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 49748720  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  49748721 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 49748819  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  49748820 agatattgctgtt 49748832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 29381827 - 29382000
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttac 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  29381827 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttttcattctgaattaaggtaaggatgaggtttac 29381926  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||||| ||||  | ||||| ||||| |||| |||||||||  |||||| | ||| | | |||||||||||||    
T  29381927 ttcaataatgtagttattaaattctgattttgtgtttaacagagttttggtgagaattggggaaattgggtttt 29382000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 26396704 - 26396559
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||| ||||||||| ||||||||| ||||||||||||| |||||||    
T  26396704 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgcggtgcatttttcattctgaattaaggtaagggtggggtttac 26396606  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  26396605 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 26396559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 39265324 - 39265469
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttc--attctgaactaaggtaagggtgaggttta 106  Q
    |||| ||||||||| |||||||||||||| ||||||||||||| |||| |  ||||||||||||||||   ||||| |||||||||||||||||||||||    
T  39265324 aagccaagggagaggaaaccaggaacaagggagaagaaccaagagaattc--ttttgctgtgcatttttcaattctaaactaaggtaagggtgaggttta 39265421  T
Q  107 cttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| | |||| | ||||| |||||||||||||||||||    
T  39265422 cttcaatagtgtagactttagattctgattttgagtttaacaggtttt 39265469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 51931325 - 51931440
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  |||||||||||| |||||||| | |||     
T  51931325 ctaaggtaagggtggggtttacttcaatagtgtatattttaaattctgattttgagtttaacagg-ttttaaagtgaaattgaggaattgggtatgaatt 51931423  T
Q  186 gaatttatggtttttgg 202  Q
    ||||| |||||||||||    
T  51931424 gaattaatggtttttgg 51931440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 11938189 - 11938045
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  |  ||  ||||||||||||| | |  | ||   |||||||||||||| |||||    
T  11938189 aagccaagggagagaaaaccaggaacaagagagaagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtggggttt 11938093  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  11938092 acttcaatagagtagattttaaagtctgattttgagtttaacaggttt 11938045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 5939909 - 5939803
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgag 141  Q
    ||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |  |||  |||||||||||     
T  5939909 agaaccaagggaaccc-tttttgctgtgcatttctcattctgaattaaggtaagggtgaggtttacttcaatagtgtagttactaatttctgaatttgaa 5939811  T
Q  142 tttaacag 149  Q
    ||||||||    
T  5939810 tttaacag 5939803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 13480150 - 13480288
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||| |||| || |||| ||  ||||| ||||||||||||||  || ||| |  |||||| |||||||||| | |       
T  13480150 ctaaggtaagggtgaggtttacttcagtagtatagatttcaatttctgattttgagtttaacagtgttctggtg-aaaattgggaaattgggtctaagat 13480248  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13480249 gaattaatggtttttggggtagatattgctgttttgatgt 13480288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 7360212 - 7360119
Alignment:
Q  62 tttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  7360212 tttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 7360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 23435121 - 23435189
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||    
T  23435121 ctaaggtaagggtgaggtttacttcaatagtgtagactttaaattctgattttgagtttaacaggtttt 23435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 3259106 - 3259201
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| || ||||  | || |||||||| |||||||||||||||||||    
T  3259106 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacctcagtattgtagctatttaagtctgattttgagtttaacaggtttt 3259201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 900534 - 900464
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    ||||||||||||||||||||||||| |||| || |||||||| | ||| ||||||||||||||||||||||    
T  900534 taaggtaagggtgaggtttacttcagtagtatagattttaaattatgattttgagtttaacaggtttttgg 900464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 14063816 - 14063677
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| ||||||| |||||| || | |||||||||||||| || | ||||| |   |||||||||||||||||||| |||||     
T  14063816 gggagagaaaaccaagaacaagggagaagagccaagg-aaccgatttttgctgtgcaatt-ctttctgcaaatctaaggtaagggtgaggtttgcttcat 14063719  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| || || || || ||||| ||||||||||||| |||||    
T  14063718 tagtatagatattgaattctgattttgagtttaacacgtttt 14063677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 15359901 - 15360000
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttcattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||   |||||||||| ||||| ||||||  |||||||||| |||||||| ||||| ||    
T  15359901 gggagagaaaaccaggaacaagggagaagagccaagagaatcca--attgctgtgcatttttccttctgagttaaggtaaggatgaggtttgcttcagta 15359998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 47870203 - 47870279
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||| |||||||||||||||||||| |||| || |||||||  ||||||||||| ||||||||  ||||||||||||    
T  47870203 taagataagggtgaggtttacttcagtagtatagattttaatttctgaatttgaatttaacagagttttggagtgaa 47870279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 52501514 - 52501422
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||  | |||||  |||| ||||  |||||||||||||    
T  52501514 ttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaagaatgtagttattaaatcctgattttgtatttaacaggtttt 52501422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 1584848 - 1584781
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  1584848 taaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 1584781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 45958884 - 45958947
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||    
T  45958884 ctaaggtaagggtgaggtttacttcagtagtatatattttaatttctgattttgagtttaacag 45958947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 14555214 - 14555283
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||| |||||| ||||| ||  |||| ||||| ||||| ||||||||||||    
T  14555214 aactaaggtaagggtgaggtttaattcaattgtgtagatgctaaattctgattttgattttaacaggttt 14555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 19127456 - 19127545
Alignment:
Q  61 ttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||| || |  ||||  ||||| || |||||||||||    
T  19127456 ttttgctgtgaatttttcattctgaattaaggtaagggtgaggtttacttcagtagtatagacattaatttctgatttggagtttaacag 19127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 33222313 - 33222220
Alignment:
Q  57 ccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||| |||| || |  || || ||||| |||| |||||||||    
T  33222313 ccatttttgatgtgcatttttcattctgaattaaggtaagggtgaggtttgcttcagtagtatagacattgaattctgattttgtgtttaacag 33222220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 53904468 - 53904525
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  53904468 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 53904525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 16228198 - 16228336
Alignment:
Q  17 ggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattt--tcattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||  || |  |||||||||  |||| ||||  ||||||||||||||||||| ||||||||    
T  16228198 ggagagaaaaccaagaacaagggagaagagccaagagaatccgattgt--tgtgcatttgttcat-ctgatttaaggtaagggtgaggtttgcttcaata 16228294  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||||  | ||||| ||||| |||| |||||||| | ||||||    
T  16228295 gtgtagttattaaattctgattttg-gtttaacaagcttttgg 16228336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 29447817 - 29447885
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| || ||| | |||||  |||||||||||||||||||    
T  29447817 taaggtaagggtggggtttacttcaatagtgtagatgttagattctgatttttgagtttaacaggtttt 29447885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 29454501 - 29454569
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| || ||| | |||||  |||||||||||||||||||    
T  29454501 taaggtaagggtggggtttacttcaatagtgtagatgttagattctgatttttgagtttaacaggtttt 29454569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 37622448 - 37622516
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  |  | |  ||||| |||||||||||||||||||    
T  37622448 ctaaggtaagggtgaggtttacttcaatagtgtagttactgatttctgattttgagtttaacaggtttt 37622516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 41528233 - 41528301
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| || |  ||| | || ||||| |||||||||||||||||||    
T  41528233 ctaaggtaagggtgaggtttacttcaattgtattgattctgaattctgattttgagtttaacaggtttt 41528301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 18165413 - 18165500
Alignment:
Q  67 tgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||  ||||| | ||||||||||||||||||| |||||||||||||  | || || ||||| |||| |||||||| |||||    
T  18165413 tgtgcatttttcttctggattaaggtaagggtgaggtttgcttcaatagtgtagttattgaattctgattttgggtttaacaagtttt 18165500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 42955186 - 42955249
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || | |||||  ||||||||||| ||||||||    
T  42955186 ctaaggtaagggtgaggtttacttcagtagtatagactttaatttctgaatttgaatttaacag 42955249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 44662830 - 44662925
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| |||| |||||||||  |||||| | ||| | | |||||||||||||    
T  44662830 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtgtttaacagagttttggtgagaattggggaaattgggtttt 44662925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 45141686 - 45141721
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||||    
T  45141686 aactaaggtaagggtgaggtttacttcaatagtgta 45141721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 54825315 - 54825378
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || |||| ||  ||||| ||||||||||||||    
T  54825315 ctaaggtaagggtgaggtttacttcagtagtatagatttcaatttctgattttgagtttaacag 54825378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 30240066 - 30239994
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| |||||||||| |||||||||||||  ||||||| ||||| || ||||| |||| |||||||||||||    
T  30240066 tctgaattaaggtaaggatgaggtttacttcggtagtgtagattttcaattctgattttg-gtttaacaggttt 30239994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 31665989 - 31665913
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||| |||| |||| |  |||| ||  ||||||||||||||||||||  ||||||||||||    
T  31665989 ctaaggtaagggtgaggtttatttcagtagtattgattt-aatttctgaatttgagtttaacagagttttggagtgaa 31665913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 392107 - 392039
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| ||||||  | ||||| ||||| || |  |||||||||||||    
T  392107 ctaaggtaagggtgaggtttacttcaagagtgtagttattaaattctgatttcgtatttaacaggtttt 392039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 21882532 - 21882464
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| ||  | ||||  ||||| |||||||||||||||||||    
T  21882532 ctaaggtaagggtgaggtttgcttcagtagtatagctattaatttctgattttgagtttaacaggtttt 21882464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 49051990 - 49051918
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| ||||||||||||||| ||||||||| |||| ||  | || || ||||| |||||||||||||||||||    
T  49051990 tgaattaaggtaagggtgagttttacttcagtagtataggtattgaattctgattttgagtttaacaggtttt 49051918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 11170388 - 11170455
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||  |||| || || ||| |||| ||||| ||||| ||||||||||||    
T  11170388 ctaaggtaagggtgaggtttaccgcaattgtatagattctaaattctgattttgattttaacaggttt 11170455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 30397089 - 30397018
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| |||||||||||||| ||||||||    
T  30397089 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacagagtttttgg 30397018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 33098035 - 33097972
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||    
T  33098035 ctaaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacag 33097972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 42221370 - 42221303
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||| |||||    
T  42221370 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacaagtttt 42221303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 44656909 - 44656972
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| |||| |||||||||    
T  44656909 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtgtttaacag 44656972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 47871571 - 47871634
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||| |||||||||||||||| ||||||| || ||||  ||||| |||| |||||||||    
T  47871571 ctaaggtaatggtgaggtttacttcagtagtgtagatgttaatttctgattttgggtttaacag 47871634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 14991772 - 14991837
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||| ||||| ||||||| || || || ||||| ||||| ||||||||||||    
T  14991772 taaggtaagggtgaggtttgcttcagtagtgtagatgtttaattctgattttga-tttaacaggttt 14991837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 15325899 - 15325835
Alignment:
Q  90 ggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||| ||||| |||| || ||| | || ||||| ||||||||||| |||||||    
T  15325899 ggtaagggtgaggtttgcttcattagtatagattctgaattctgattttgagtttaataggtttt 15325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 16999308 - 16999376
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||  |||| || ||  || | || ||||| |||||||||||||||||||    
T  16999308 ctaaggtaagggtgaggtttaccgcaattgtataggttatgaattctgattttgagtttaacaggtttt 16999376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 37882436 - 37882369
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||| |||||||||| ||||| |||| || || ||||  ||||| |||||||||||||||||||    
T  37882436 ctaaggtaatggtgaggtttgcttcagtagtatagatgttaat-tctgattttgagtttaacaggtttt 37882369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 36211098 - 36211313
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36211098 aagccaaggaagagaaaaccaggaacaagggagaagaaccaagggaatccatttttgctgtgcatttttattctgaactaaggtaagggtgaggtttact 36211197  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36211198 tcaatagtgtagattttaaagtctg-atttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggggtaga 36211296  T
Q  209 tattgctgttttgatgt 225  Q
    ||||| |||| ||||||    
T  36211297 tattgttgttctgatgt 36211313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 38907100 - 38907245
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38907100 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgagatttact 38907199  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||    
T  38907200 tcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 38907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 6741509 - 6741371
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  6741509 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 6741411  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  6741410 gaatttatggtttttggggtagatattgctattctgatgt 6741371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 31534348 - 31534556
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  31534348 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 31534444  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  31534445 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 31534543  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  31534544 agatattgctgtt 31534556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 31563065 - 31563273
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  31563065 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 31563161  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  31563162 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 31563260  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  31563261 agatattgctgtt 31563273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 24425105 - 24425003
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24425105 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 24425006  T
Q  109 tca 111  Q
    |||    
T  24425005 tca 24425003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 29601347 - 29601553
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||||||||| ||||||||| ||    
T  29601347 gggagagaaaaccaggaacaagagaggagaaccaagagaatccattt--gctgtgcatttttcattctgaattaaggtaagggtgagttttacttcagta 29601444  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagt-gaaattgagaaattgggttttaatggaatttatggtttttggggtagatattg 213  Q
    || ||  | | ||| |||||||| ||||||||||||||||   ||| ||||||||| |||||||| | | | ||||| ||||||||||||||||||||||    
T  29601445 gtatagttatgaaattctgaattggagtttaacaggtttt---agtggaaattgaggaattgggtataagttgaattaatggtttttggggtagatattg 29601541  T
Q  214 ctgttttgatgt 225  Q
    ||||| ||||||    
T  29601542 ctgttctgatgt 29601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20293668 - 20293531
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| | ||| |    
T  20293668 taaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgagtttaacagg-ttttggagtgaaattgaggaattgggtataaattg 20293570  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  20293569 aattaatggtttttggggtagatattgttgttctgatgt 20293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20300299 - 20300162
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| | ||| |    
T  20300299 taaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgagtttaacagg-ttttggagtgaaattgaggaattgggtataaattg 20300201  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  20300200 aattaatggtttttggggtagatattgttgttctgatgt 20300162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 48428911 - 48428776
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  48428911 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagta 48428813  T
Q  118 tacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    || | ||||||||||||||||||||||||||||||||    
T  48428812 tagaatttaaagtctgaatttgagtttaacaggtttt 48428776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 21921854 - 21921648
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||||||||| ||||||||| ||    
T  21921854 gggagagaaaaccaggaacaagggaggagaaccaagagaatccattt--gctgtgcatttttcattctgaattaaggtaagggtgagttttacttcagta 21921757  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagtg-aaattgagaaattgggttttaatggaatttatggtttttggggtagatattg 213  Q
     | ||  | | ||| |||||||| ||||||||||||||||   |||| |||||||| |||||||| | | | ||||| ||||||||||||||||||||||    
T  21921756 atatagttatgaaattctgaattggagtttaacaggtttt---agtggaaattgaggaattgggtataagttgaattaatggtttttggggtagatattg 21921660  T
Q  214 ctgttttgatgt 225  Q
    ||||| ||||||    
T  21921659 ctgttctgatgt 21921648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 12203669 - 12203579
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtg 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12203669 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtg 12203579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20571733 - 20571596
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||  ||||| || | ||| |    
T  20571733 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggagtgaaattgaagaattgagtataaattg 20571635  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| ||||||||||||||||||| || |||| ||||||    
T  20571634 aattaatggtttttggggtagataatgatgttctgatgt 20571596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 29150362 - 29150499
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||  |||| ||| | ||| |    
T  29150362 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggagtgaaattgaagaatttggtataaattg 29150460  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||  | |||||||| ||||||| ||||||| ||||||    
T  29150461 aattattcgtttttggagtagatactgctgttctgatgt 29150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 20075992 - 20076137
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-catt-ctgaactaaggtaagggtgaggttta 106  Q
    |||| ||||||||| |||||||||||||| |||||||| |||| |||| |  |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20075992 aagccaagggagaggaaaccaggaacaagcgagaagaagcaagagaattc--ttttgctgtgcatttttcatttctgaactaaggtaagggtgaggttta 20076089  T
Q  107 cttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||| |||| || || || |  ||||| |||||||||||||||||||    
T  20076090 cttcagtagtatagatgttgatttctgattttgagtttaacaggtttt 20076137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 19045399 - 19045494
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| | | | | |||||||||||||||||||    
T  19045399 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagtgtagattttagatttttattttgagtttaacaggtttt 19045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 37676475 - 37676331
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  |  ||  ||||||||||||| | |  | ||   |||||||||||||| |||||    
T  37676475 aagccaagggagagaaaaccaggaacaagagagaagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtggggttt 37676379  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  37676378 acttcaatagagtagattttaaagtctgattttgagtttaacaggttt 37676331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 37683146 - 37683002
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  |  ||  ||| ||||||||| | |  | ||   |||||||||||||| |||||    
T  37683146 aagccaagggagagaaaaccaggaacaagagagaagaaccaagag--ttgatcattgttgtgcattt-cttcttcaatttctaaggtaagggtggggttt 37683050  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  37683049 acttcaatagagtagattttaaagtctgattttgagtttaacaggttt 37683002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 49329022 - 49328885
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||| ||||||||| |||| || || | ||| |||||||||| |||||||||| ||||||   |||||||||||||||||| | |   |    
T  49329022 taaggtaagggtgagttttacttcagtagtatagatatgaaattctgaatttgggtttaacagggttttgg-tagaaattgagaaattgggtataagatg 49328924  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  49328923 aattaatggtttttggggtagatattgttgttatgatgt 49328885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 39188801 - 39188869
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||| |||||||||||||||||||    
T  39188801 ctaaggtaagggtgaggtttacttcaatagtatagaatttaaagtctgattttgagtttaacaggtttt 39188869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 20276375 - 20276470
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||| |||| |||||||||  |||||| | ||| | | |||||||||||||    
T  20276375 ctaaggtaagggtgaggtttacttcaatagtgtagattttagattctgattttgtgtttaacagagttttggtgagaattggggaaattgggtttt 20276470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 20396014 - 20396104
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||  | ||||| | ||| |||| |||||||||    
T  20396014 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatattgtagctattaaattttgattttgtgtttaacag 20396104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 16882689 - 16882758
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  16882689 aactaaggtaagggtgaggtttacttcaatagtgtagttgataaattctgattttgattttaacaggttt 16882758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 21736152 - 21736084
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||||||||||||||||||||||||||||||| ||  | || ||||| ||||| |||||||||||||||    
T  21736152 aaggtaagggtgaggtttacttcaatagtgtagatacttaattctgattttgattttaacaggtttttg 21736084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 36918123 - 36918047
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || |  ||||  ||||| ||||||||||||||    
T  36918123 ttttcattctgaattaaggtaagggtgaggtttacttcagtagtatagacattaatttctgattttgagtttaacag 36918047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 11140185 - 11140287
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatt--ttcattctgaactaaggtaagggtgaggtttacttcaat 113  Q
    |||||||||||||| ||||||| ||||||| ||||| ||||||| || |  ||||||||  ||||| ||||  ||||||||||||||||||| |||||||    
T  11140185 gggagagaaaaccaagaacaagggagaagagccaagagaatccaattgt--tgtgcattcgttcat-ctgatttaaggtaagggtgaggtttgcttcaat 11140281  T
Q  114 agtgta 119  Q
    ||||||    
T  11140282 agtgta 11140287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 18419131 - 18419050
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||  | || || ||||| ||||  |||||||||||||    
T  18419131 ttttcattctgaattaaggtaagggtgaggtttacttcaagaatgtagttattgaattctgattttgtatttaacaggtttt 18419050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 19854052 - 19853983
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||||||||||||| ||| ||  | || ||||| ||||| ||||||||||||    
T  19854052 aactaaggtaagggtgaggtttacttcaatagcgtagatggttaattctgattttgattttaacaggttt 19853983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 19860187 - 19860122
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||    
T  19860187 aactaaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacag 19860122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 21665195 - 21665126
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||| ||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  21665195 aactaaggtaagggtgagatttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 21665126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 24108161 - 24108298
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttt-taat 184  Q
    |||||||||||||||| ||||||||| |||| || || ||  | |||||  ||||||||||||||||||||| | ||| | || |  |||||||| | ||    
T  24108161 ctaaggtaagggtgagttttacttcagtagtatagatatttgattctga--ttgagtttaacaggtttttggtgagaattggaaattttgggtttgtgat 24108258  T
Q  185 ggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
     ||||| ||||||||||||||||| |||| |||||||||||    
T  24108259 -gaattaatggtttttggggtagagattgttgttttgatgt 24108298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 19777803 - 19777871
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| || |  ||| | || ||||| |||||||||||||||||||    
T  19777803 ctaaggtaagggtgaggtttacttcaattgtattgattctgaattctgattttgagtttaacaggtttt 19777871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 21964003 - 21963935
Alignment:
Q  81 ctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||| ||||||||||||||||||||||||| |||| || |||| ||  ||||| ||||||||||||||    
T  21964003 ctgaattaaggtaagggtgaggtttacttcagtagtatagatttcaatttctgattttgagtttaacag 21963935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 28555626 - 28555694
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  |  | |  ||||| |||||||||||||||||||    
T  28555626 ctaaggtaagggtgaggtttacttcaatagtgtagttactgatttctgattttgagtttaacaggtttt 28555694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 30490580 - 30490651
Alignment:
Q  81 ctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||| ||||||||||||||||||||||||| ||||||| || || || ||||| |||| |||||||||||||    
T  30490580 ctgaattaaggtaagggtgaggtttacttcagtagtgtagatgtttaattctgattttg-gtttaacaggttt 30490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 42627190 - 42627122
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  | || |  | ||| |||||||||||||||||||    
T  42627190 ctaaggtaagggtgaggtttacttcaatagtgtagttattgatttttgattttgagtttaacaggtttt 42627122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 19665860 - 19665895
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||||    
T  19665860 aactaaggtaagggtgaggtttacttcaatagtgta 19665895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 15315629 - 15315682
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    ||||||||||||||  ||||||| ||||||||||||||| ||| ||||||||||    
T  15315629 ttgctgtgcatttttcttctgaattaaggtaagggtgagatttgcttcaatagt 15315682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 17150308 - 17150275
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||    
T  17150308 ctaaggtaagggtgaggtttacttcaatagtgta 17150275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 31926445 - 31926517
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| ||||||| || || || ||||| ||||| ||||||||||||    
T  31926445 tctgaattaaggtaagggtgaggtttgcttcagtagtgtagatgtttaattctgattttga-tttaacaggttt 31926517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 24080581 - 24080514
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || || || || ||||| |||||||||||||||||||    
T  24080581 ctaaggtaagggtgaggtttgcttcagtagtatagatgtt-aattctgattttgagtttaacaggtttt 24080514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 41052734 - 41052666
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||  ||||||||| || ||||  | ||||||||||| ||||||||| |||||||||    
T  41052734 ctaaggtaagggtgaaatttacttcagtattgtagctattaaagtctgattttgagtttgacaggtttt 41052666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 4232177 - 4232118
Alignment:
Q  90 ggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||  |  |||  ||||||||||| ||||||||    
T  4232177 ggtaagggtgaggtttacttcaatagtgtagttagtaatttctgaatttgaatttaacag 4232118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 29553525 - 29553664
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| ||| ||| |||||| || | |||||||||| |||||| | ||||| |   |||||||||||||||||||| |||||     
T  29553525 gggagagaaaaccaagaacaagggaggagagccaagg-aaccgatttttgctgcgcattt-ctttctgcaaatctaaggtaagggtgaggtttgcttcag 29553622  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| ||  | ||    ||||| |||||||||||||||||||    
T  29553623 tagtatagttattgtgttctgattttgagtttaacaggtttt 29553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 24237557 - 24237619
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||    
T  24237557 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacag 24237619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 47485098 - 47485028
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| |||||||| ||||| |||||||    
T  47485098 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagttcaacagatttttgg 47485028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 21699142 - 21699070
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || || || || ||||| |||| |||||||||||||    
T  21699142 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatgtttaattctgattttg-gtttaacaggttt 21699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 9292669 - 9292629
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaa 127  Q
    ||||||||||||||||||||||||| |||| || |||||||    
T  9292669 taaggtaagggtgaggtttacttcagtagtatagattttaa 9292629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 21986033 - 21986073
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttac-ttcaatagtgta 119  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  21986033 tctgaattaaggtaagggtgaggtttactttcaatagtgta 21986073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 23065825 - 23065893
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||| |||| || ||  || | || ||||| |||||||||||||| ||||    
T  23065825 ctaaggtaagggtgaggtttactgcaattgtataggttctgaattctgattttgagtttaacagatttt 23065893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 23194507 - 23194547
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| | ||||||||||||||||| |||||||||||||    
T  23194507 ttctgaattcaggtaagggtgaggtttgcttcaatagtgta 23194547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 26089053 - 26089268
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089053 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 26089152  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  26089153 tcaatagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttggggtaga 26089251  T
Q  209 tattgctgttttgatgt 225  Q
    || ||||||| ||||||    
T  26089252 tactgctgttctgatgt 26089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 26112858 - 26113073
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26112858 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 26112957  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||| ||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  26112958 tcattagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttggggtaga 26113056  T
Q  209 tattgctgttttgatgt 225  Q
    || ||||||| ||||||    
T  26113057 tactgctgttctgatgt 26113073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 26119475 - 26119690
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26119475 aagccaagggagaggaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 26119574  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||| ||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  26119575 tcattagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttggggtaga 26119673  T
Q  209 tattgctgttttgatgt 225  Q
    || ||||||| ||||||    
T  26119674 tactgctgttctgatgt 26119690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 5186355 - 5186554
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtg 117  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  5186355 agagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagta 5186453  T
Q  118 tacattttaaa-gtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctg 216  Q
    || |||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  5186454 tagattttaaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagtagatattgctg 5186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 40683864 - 40684072
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  40683864 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 40683960  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  40683961 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 40684059  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  40684060 agatattgctgtt 40684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 48987023 - 48987231
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  48987023 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 48987119  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  48987120 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 48987218  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  48987219 agatattgctgtt 48987231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 750835 - 750704
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  750835 ctaaggtaagggtgaggtttacttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 750737  T
Q  186 gaatttatggtttttggggtagatattgctgtt 218  Q
    ||||||||||||||||| |||||||||||||||    
T  750736 gaatttatggtttttggagtagatattgctgtt 750704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 643619 - 643479
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  643619 aagccaagggagagagaaccaagaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 643520  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||| | ||||  | ||||| ||||| |||| |||||||||    
T  643519 tcaagaatgtagttattaaattctgattttgtgtttaacag 643479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 37288458 - 37288321
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||| | ||| |    
T  37288458 taaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggagtgaaattgaagaattgggtataaattg 37288360  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  37288359 aattaatggtttttggggtagatattgctgttctgatgt 37288321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 40922027 - 40922167
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaa 112  Q
    |||| |||||||||||||| ||||||||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  40922027 aaggaagagaaaaccaggagcaagagagaggaaccagaggaatccctttttgctgtgcatttttcattctgaactaaggtaagggtggggtttacttcaa 40922126  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| | |||||||||||| ||||||||||||||||||    
T  40922127 tagtgtagaatttaaagtctgattttgagtttaacaggttt 40922167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 33405668 - 33405506
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtg 161  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  33405668 ttgctgtgcatttttcattctaaattaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctgattttgagtttaacagg-ttttggagtg 33405570  T
Q  162 aaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||  |||||||| | ||| |||||  ||||||||||||| |||| ||||||| ||||||    
T  33405569 aaattgaagaattgggtataaattgaattattggtttttggggtggatactgctgttctgatgt 33405506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 1318834 - 1318689
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  1318834 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 1318736  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  1318735 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 1318689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 49151657 - 49151512
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  49151657 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgcggtgcatttttcattctgaactaaggtaagggtggggtttac 49151559  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| |  ||||||||||| |||||||||||||||||||    
T  49151558 ttcaatggtgtagaaattaaagtctgattttgagtttaacaggtttt 49151512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 49158347 - 49158202
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  49158347 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgcggtgcatttttcattctgaactaaggtaagggtggggtttac 49158249  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| |  ||||||||||| |||||||||||||||||||    
T  49158248 ttcaatggtgtagaaattaaagtctgattttgagtttaacaggtttt 49158202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 2387764 - 2387897
Alignment:
Q  91 gtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatt 190  Q
    ||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||| ||||| |||||||||||| |||||||| | | | |||||    
T  2387764 gtaagggtgaggtttacttcaatagtgtagattttaatttctgattttgagtttaacagg-ttttgaagtgaaattgaggaattgggtataagttgaatt 2387862  T
Q  191 tatggtttttggggtagatattgctgttttgatgt 225  Q
     |||||||||||||||||||||| |||| ||||||    
T  2387863 aatggtttttggggtagatattgttgttctgatgt 2387897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 11340760 - 11340665
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||  | ||||||||||| |||||||||||||||||||    
T  11340760 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcagtattgtagctattaaagtctgattttgagtttaacaggtttt 11340665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 19463672 - 19463530
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||| | ||||||||| |||| || || | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||| |     
T  19463672 tgaattaaggtaagggtgggttttacttcagtagtatagatatgaaattctgaattggagtttaacaggtttttggtg-gaaattgagaaattgggtcta 19463574  T
Q  182 aatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |   ||||| |||||||||||||||||||||| |||| ||||||    
T  19463573 agatgaattaatggtttttggggtagatattgttgttctgatgt 19463530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 18436343 - 18436438
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||  | ||||||||||| ||||||||| |||||||||    
T  18436343 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcagtattgtagctattaaagtctgattttgagtttgacaggtttt 18436438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 2025402 - 2025470
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||    
T  2025402 ctaaggtaagggtgaggtttacttcaatagtgtagactttaaattctgattttgagtttaacaggtttt 2025470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 11298798 - 11298945
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt---cattctgaactaaggtaagggtgaggttt 105  Q
    |||| |||| |||||||||||||| |||| |||||||||||  |||| || |||| ||||||||||||   |||||||||||||||||||||||||||||    
T  11298798 aagccaaggaagagaaaaccaggagcaagggagaagaaccagaggaacccctttt-gctgtgcatttttttcattctgaactaaggtaagggtgaggttt 11298896  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
     ||||| |||| || |  ||||  ||||| ||||| |||| ||||||||    
T  11298897 gcttcagtagtatagacattaatctctgattttgaatttatcaggtttt 11298945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 11307162 - 11307309
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt---cattctgaactaaggtaagggtgaggttt 105  Q
    |||| |||| |||||||||||||| |||| |||||||||||  |||| || |||| ||||||||||||   |||||||||||||||||||||||||||||    
T  11307162 aagccaaggaagagaaaaccaggagcaagggagaagaaccagaggaacccctttt-gctgtgcatttttttcattctgaactaaggtaagggtgaggttt 11307260  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
     ||||| |||| || |  ||||  ||||| ||||| |||| ||||||||    
T  11307261 gcttcagtagtatagacattaatctctgattttgaatttatcaggtttt 11307309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 32628399 - 32628331
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||| ||||||||| | |||||| ||||| |||||||||||||||||||    
T  32628399 ctaaggtaagggtgaggtttactttaatagtgtagactttaaattctgattttgagtttaacaggtttt 32628331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 8196379 - 8196446
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||| ||||| | |||||||||||| |||||||||||||||||||    
T  8196379 taaggtaagggtggggtttacttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 8196446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 30602013 - 30602108
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  |||||||||||||    
T  30602013 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggtttt 30602108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 49159799 - 49159723
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||    
T  49159799 agaaccaagggaaccc-tttttgctgtgcatttctcattctgaattaaggtaagagtgaggtttagttcaatagtgta 49159723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 8213082 - 8213144
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||| ||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  8213082 taaggtaagggtggggtttacttcaatggtgtagaatttaaagtctgattttgagtttaacag 8213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 23521971 - 23521905
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||  | ||||  ||||| |||||||||||||||||||    
T  23521971 aaggtaagggtgaggtttacttcaatagtgtagttattaatttctgattttgagtttaacaggtttt 23521905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 11898495 - 11898552
Alignment:
Q  92 taagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  11898495 taagggtgaggtttacttcaatagtgtagattttaaattctgattttgtgtttaacag 11898552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 15085087 - 15085175
Alignment:
Q  66 ctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||| |||| || || || || ||||| |||||||||||||||||||    
T  15085087 ctgtgcatttgtccttctgaattaaggtaagggtgaggtttacttcagtagtatagatgtt-aattctgattttgagtttaacaggtttt 15085175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 12429877 - 12429783
Alignment:
Q  62 tttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||  |||||   |||||||||||| ||||||||||||||||||||||| ||  |||| ||||| ||||| | ||||||||||    
T  12429877 tttgctgtgcattttttttctgcaaaactaaggtaagagtgaggtttacttcaatagtgtagatgctaaattctgattttgattataacaggttt 12429783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 12455052 - 12454977
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||||||| |||| || || ||||  ||||| ||||||||||||||| ||||||||||||    
T  12455052 taaggtaagggtgaggtttacttcagtagtatagatcttaatttctgattttgagtttaacagg-ttttggagtgaa 12454977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 13020699 - 13020631
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| |||||||||||||  | ||||  ||||| |||||||||||||||||||    
T  13020699 ctaaggtaagggtgaggtttgcttcaatagtgtagttattaatttctgattttgagtttaacaggtttt 13020631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 13026906 - 13026838
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| |||||||||||||  | ||||  ||||| |||||||||||||||||||    
T  13026906 ctaaggtaagggtgaggtttgcttcaatagtgtagttattaatttctgattttgagtttaacaggtttt 13026838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 13452980 - 13453047
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  13452980 taaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 13453047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 21758285 - 21758218
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  21758285 taaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 21758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 46175313 - 46175250
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||    
T  46175313 ctaaggtaagggtgaggtttacttcagtagtatagattttaatttctgattttgagtttaacag 46175250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 15436700 - 15436773
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| ||||||||||||||||||||||||| ||||||| || || || ||||| |||| |||||||||||||    
T  15436700 ttctgaattaaggtaagggtgaggtttacttcagtagtgtagatgtttaattctgattttg-gtttaacaggttt 15436773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 3328887 - 3328762
Alignment:
Q  23 aaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatt--ttcattctgaactaaggtaagggtgaggtttacttcaatagtgtac 120  Q
    ||||||| || |||||||||||||||||| |||||| || ||||||||||||  |||| | |||| ||||||||||||||| ||||||||| |||| ||     
T  3328887 aaaaccaagagcaagagagaagaaccaagagaatcc-ttattgctgtgcatttcttcaat-tgaattaaggtaagggtgagttttacttcagtagtatag 3328790  T
Q  121 attttaaagtctgaatttgagtttaacag 149  Q
    || || || ||||| |||| |||||||||    
T  3328789 atattgaattctgattttg-gtttaacag 3328762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 10520838 - 10520781
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  10520838 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 10520781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 11854533 - 11854590
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  11854533 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 11854590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 16475265 - 16475337
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||| ||||||||||||||||||| ||||||| ||||| || ||||| |||| |||||||||||||    
T  16475265 tctgaattaaggcaagggtgaggtttacttcagtagtgtagatttttaattctgattttg-gtttaacaggttt 16475337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 46347896 - 46347965
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||||||||||||||||| ||  | || | ||| ||||| ||||||||||||    
T  46347896 aactaaggtaagggtgaggtttacttcaatagtgtagatgattaattttgattttgattttaacaggttt 46347965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 12462508 - 12462433
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||||||| |||| || || ||||  ||||| ||||||||||||| | ||||||||||||    
T  12462508 taaggtaagggtgaggtttacttcagtagtatagatcttaatttctgattttgagtttaacaag-ttttggagtgaa 12462433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 13963182 - 13963250
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  |  | |  ||||| |||||||||||||||||||    
T  13963182 ctaaggtaagggtgaggtttacttcaatagtgtagttactgatttctgattttgagtttaacaggtttt 13963250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 15839595 - 15839528
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  | ||||  ||||| ||||||||||||| |||||    
T  15839595 ctaaggtaagggtgaggtttacttcaatagtgta-gtattaatttctgattttgagtttaacaagtttt 15839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 15097075 - 15097166
Alignment:
Q  63 ttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| ||||| |||| ||  | || || ||||| |||| |||||||||||||    
T  15097075 ttgctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattgaattctgattttgggtttaacaggttt 15097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 15103451 - 15103542
Alignment:
Q  63 ttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| ||||| |||| ||  | || || ||||| |||| |||||||||||||    
T  15103451 ttgctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattgaattctgattttgggtttaacaggttt 15103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 18956015 - 18956089
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||| ||||||||||||||| ||||||||| |||| || || || || |||| |||||||||||||||||||||||    
T  18956015 tgaattaaggtaagggtgagttttacttcagtagtatagatattgaattctg-atttgagtttaacaggtttttgg 18956089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 15143246 - 15143174
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| |||| || ||||| || ||||| |||| ||||||| |||||    
T  15143246 tctgaaataaggtaagggtgaggtttacttcagtagtatagatttttaattctgattttg-gtttaacgggttt 15143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 20018852 - 20018885
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||    
T  20018852 ctaaggtaagggtgaggtttacttcaatagtgta 20018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 2439876 - 2439808
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  |||||||||||||    
T  2439876 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggtttt 2439808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 11219273 - 11219341
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||| |||||||||||||| |||| || || ||| | || ||||| |||||||||||||||||||    
T  11219273 ctaaggtaggggtgaggtttactgcaattgtatagattctgaattctgattttgagtttaacaggtttt 11219341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 11880059 - 11879991
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| ||||  |||||||||||||    
T  11880059 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggtttt 11879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 15632352 - 15632284
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||| ||||||||||||||||||||||  |  | |  ||||| |||||||||||||||||||    
T  15632352 ctaaggtaaggttgaggtttacttcaatagtgtagttactgatttctgattttgagtttaacaggtttt 15632284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 35961878 - 35961946
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||| |||| || ||  || | || ||||| |||||||||||||||||||    
T  35961878 ctaaggtaagggtgaggtttactgcaattgtataggttctgaattctgattttgagtttaacaggtttt 35961946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 118
Target Start/End: Original strand, 16184600 - 16184631
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgt 118  Q
    ||||||||||||||||||||||||||||||||    
T  16184600 taaggtaagggtgaggtttacttcaatagtgt 16184631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 16843049 - 16843112
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||    
T  16843049 ctaaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacag 16843112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 16951369 - 16951443
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||| ||||||||||||||| ||||||||| |||| ||  | || || |||| |||||||||||||||||||||||    
T  16951369 tgaattaaggtaagggtgagttttacttcagtagtataggtattgaattctg-atttgagtttaacaggtttttgg 16951443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 19600858 - 19600809
Alignment:
Q  61 ttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttac 107  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  19600858 ttttgctgtgcattttccttctgcaaaactaaggtaagggtgaggtttac 19600809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 2312 - 2381
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    ||||||||||||||| ||||||||| |||| || || ||  | ||||| ||||||||||||||||||||||    
T  2312 taaggtaagggtgagttttacttcagtagtatagatgttggattctga-tttgagtttaacaggtttttgg 2381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 750912 - 750870
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaag 51  Q
    |||| |||||||||||||||| ||||||||||| |||||||||    
T  750912 aagccaagggagagaaaaccaagaacaagagaggagaaccaag 750870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 6412859 - 6412794
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggt 151  Q
    |||||||||||||||||||| ||||| |||| || || ||  | ||||| ||||||||||||||||    
T  6412859 ctaaggtaagggtgaggtttgcttcattagtatagatattgtattctgattttgagtttaacaggt 6412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 14580688 - 14580760
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || ||||| || ||||| ||||| ||||||| ||||    
T  14580688 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatttttaattctgattttga-tttaacaagttt 14580760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 45186482 - 45186410
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || || || || ||||| |||| |||||||||||||    
T  45186482 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatgtttaattctgattttg-gtttaacaggttt 45186410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 46681329 - 46681394
Alignment:
Q  88 aaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||| ||||| |||| ||  |||| || ||||| ||||| ||||||||||||    
T  46681329 aaggtaagggtgaggtttgcttcagtagtatagtttttgaattctgattttgaatttaacaggttt 46681394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 15722314 - 15722424
Alignment:
Q  43 agaaccaagggaatccatttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttg 139  Q
    ||||||||||  ||| ||||||||||||||||| | |||||   ||||||||||||||||||||||||  |||| || || ||| | || ||||| ||||    
T  15722314 agaaccaagg--atcaatttttgctgtgcatttcc-ttctgcaaaactaaggtaagggtgaggtttaccgcaattgtatagattctgaattctgattttg 15722410  T
Q  140 agtttaacaggttt 153  Q
      ||||||||||||    
T  15722411 tttttaacaggttt 15722424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 26288916 - 26288983
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || || || || ||||| |||||||||||||| ||||    
T  26288916 ctaaggtaagggtgaggtttgcttcagtagtatagatgtt-aattctgattttgagtttaacagatttt 26288983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 24370224 - 24370010
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24370224 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 24370125  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||| ||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||    
T  24370124 tcattagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttgggataga 24370026  T
Q  209 tattgctgttttgatg 224  Q
    || ||||||| |||||    
T  24370025 tactgctgttctgatg 24370010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 24363633 - 24363419
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24363633 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 24363534  T
Q  109 tcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtaga 208  Q
    ||| ||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||| || |    
T  24363533 tcattagtgtagattttaaagtctgattttggttttaacagg-ttttggagtgaaattgaagaattgggtattaattgaatttatggtttttgggataaa 24363435  T
Q  209 tattgctgttttgatg 224  Q
    || ||||||| |||||    
T  24363434 tactgctgttctgatg 24363419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 33875943 - 33875805
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  33875943 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 33875845  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  33875844 gaatttatggtttttggggtagatattgctattctgatgt 33875805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 218
Target Start/End: Complemental strand, 25464908 - 25464700
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |  |  ||  ||||||||||||| | |  | ||   ||||||||||||||||||||    
T  25464908 aagccaagggagagaaaaccaggaacaagagaggagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtgaggttt 25464812  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  25464811 acttcaatagtatagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaattgaatttatggtttttggagt 25464713  T
Q  206 agatattgctgtt 218  Q
    |||||||||||||    
T  25464712 agatattgctgtt 25464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 10469825 - 10470031
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  10469825 gggagagaaaaccaggaacaagggagaagaaccaagagaatccattt--gctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaata 10469922  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgc 214  Q
    |||||  | ||||  ||||| ||||||||||||||||||| || | ||| ||||| |||||||| | |   ||||| ||||||||||||||||||||||     
T  10469923 gtgtagttattaatttctgattttgagtttaacaggtttt-ggtgagaa-ttgaggaattgggtataagatgaattaatggtttttggggtagatattgt 10470020  T
Q  215 tgttttgatgt 225  Q
    |||||||||||    
T  10470021 tgttttgatgt 10470031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 13127373 - 13127579
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  13127373 gggagagaaaaccaggaacaagggagaagaaccaagagaatccattt--gctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaata 13127470  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgc 214  Q
    |||||  | ||||  ||||| ||||||||||||||||||| || | ||| ||||| |||||||| | |   ||||| ||||||||||||||||||||||     
T  13127471 gtgtagttattaatttctgattttgagtttaacaggtttt-ggtgagaa-ttgaggaattgggtataagatgaattaatggtttttggggtagatattgt 13127568  T
Q  215 tgttttgatgt 225  Q
    |||||||||||    
T  13127569 tgttttgatgt 13127579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 1537410 - 1537512
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1537410 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaactaaggtaagggtgaggtttact 1537509  T
Q  109 tca 111  Q
    |||    
T  1537510 tca 1537512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 16222817 - 16222954
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||     
T  16222817 ctaaggtaagggtgttgtttacttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtggaattgaggaattggg-tttaatt 16222914  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  16222915 gaatttatggtttttggggtagatattgctattctgatgt 16222954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 15331200 - 15331345
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||||||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  15331200 aagccaaggaagagaaaaccaggaacaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtggggtttac 15331298  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  15331299 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 15331345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 17310733 - 17310588
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  17310733 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtggggtttac 17310635  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  17310634 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 17310588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 13941426 - 13941291
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||||| ||||||||| |||| || || | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||| |     
T  13941426 tgaattaaggtaagggtgagttttacttcagtagtatagatatgaaattctgaattggagtttaacaggtttttggtg-gaaattgagaaattgggtcta 13941328  T
Q  182 aatggaatttatggtttttggggtagatattgctgtt 218  Q
    |   ||||| |||||||||||||||||||||||||||    
T  13941327 agatgaattaatggtttttggggtagatattgctgtt 13941291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 1071727 - 1071586
Alignment:
Q  13 aaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt--cattctgaactaaggtaagggtgaggtttacttc 110  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||   ||||| |||||||||||||||||||||| ||||    
T  1071727 aaagggagagaaaaccaggaacaagggagaagaaccaagagaattc--ttttgctgtgcatttttcaattctaaactaaggtaagggtgaggtttgcttc 1071630  T
Q  111 aatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    | |||| || |  ||||  ||||| ||||| |||| ||||||||    
T  1071629 agtagtatagacattaatctctgattttgaatttatcaggtttt 1071586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 18787181 - 18787079
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||| ||||||| ||||||| ||||| ||||||| || |  |||||||||| | ||||||| ||||||||||||||||||||||||| ||    
T  18787181 gggagagaaaaccaagaacaagggagaagagccaagagaatccaattgt--tgtgcatttttccttctgaattaaggtaagggtgaggtttacttcagta 18787084  T
Q  115 gtgta 119  Q
    |||||    
T  18787083 gtgta 18787079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 93675 - 93751
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || ||||| || ||||||||||||||||||||  ||||||||||||    
T  93675 ctaaggtaagggtgaggtttacttcagtagtatagatttt-aattctgaatttgagtttaacagagttttggagtgaa 93751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 27768349 - 27768273
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || |||||||  ||||| ||||||||||||||| ||||||||||||    
T  27768349 ctaaggtaagggtgaggtttacttcagtagtatagattttaatttctgattttgagtttaacagg-ttttggagtgaa 27768273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 25559080 - 25559148
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| ||||||||||| || |||| | |||||||||||| |||||||||||||||||||    
T  25559080 ctaaggtaagggtggggtttacttcattaatgtagaatttaaagtctgattttgagtttaacaggtttt 25559148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 14615361 - 14615499
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| |||||||  ||||| |  ||  ||||||||||||||| | ||||| |   |||||||||||||||||||| |||||     
T  14615361 gggagagaaaaccaagaacaagggagaagagtcaaggaa--ccgattttgctgtgcattt-ctttctgcaaatctaaggtaagggtgaggtttgcttcag 14615457  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||| || || || || ||||| |||||||||||||||||||    
T  14615458 tagtatagatattgaattctgattttgagtttaacaggtttt 14615499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 19819906 - 19819834
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    |||||||||||||||||||||||||||||| ||||| ||| | || ||||| ||||| ||||||| |||||||    
T  19819906 aactaaggtaagggtgaggtttacttcaattgtgtagattctgaattctgattttgattttaacaagtttttg 19819834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 29926686 - 29926618
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| |||||||||||||  | ||||  ||||| |||||||||||||||||||    
T  29926686 ctaaggtaagggtgaggtttgcttcaatagtgtagttattaacttctgattttgagtttaacaggtttt 29926618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 25314803 - 25314866
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||| | |||||||||| | |||||| ||||| ||||||||||||||    
T  25314803 ctaaggtaagggtgaggtttattgcaatagtgtagactttaaattctgattttgagtttaacag 25314866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 26202297 - 26202360
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||| | |||||||||| | |||||| ||||| ||||||||||||||    
T  26202297 ctaaggtaagggtgaggtttattgcaatagtgtagactttaaattctgattttgagtttaacag 26202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 8068852 - 8068914
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||||||||||  | ||||  ||||||||||| ||||||||    
T  8068852 taaggtaagggtgaggtttacttcaatagtgtagttattaatttctgaatttgaatttaacag 8068914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 8767136 - 8767230
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttactt 109  Q
    |||||||||||||| ||||||| ||||||| |||||| || | ||||||||||||||||| | ||||| |   ||||||||||||||||||||||||    
T  8767136 gggagagaaaaccaagaacaagggagaagagccaagg-aaccgatttttgctgtgcattt-ctttctgcaaatctaaggtaagggtgaggtttactt 8767230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 19468876 - 19468798
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggt 151  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  |  |||| ||||| ||||| ||||||||||    
T  19468876 ttttctttctgaattaaggtaagggtgaggtttgcttcaatagtgtagttgataaattctgattttgattttaacaggt 19468798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 19587728 - 19587799
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||| ||||| |||| || ||| |||| |||||  |||||||||||||||||||    
T  19587728 aactaaggtaagggtgaggtttgcttcattagtatagattctaaattctgatttttgagtttaacaggtttt 19587799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 8759375 - 8759469
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttactt 109  Q
    |||||||||||||| ||||||| ||||||| |||||| || | ||||||| ||||||||| | ||||| |   ||||||||||||||||||||||||    
T  8759375 gggagagaaaaccaagaacaagggagaagagccaagg-aaccgatttttgttgtgcattt-ctttctgcaaatctaaggtaagggtgaggtttactt 8759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 24721640 - 24721594
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  24721640 ttttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 24721594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 18315109 - 18315181
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || ||||| || ||||| |||| |||||||||||||    
T  18315109 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatttttaattctgattttg-gtttaacaggttt 18315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 23232544 - 23232597
Alignment:
Q  67 tgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||||||||||||    
T  23232544 tgtgcatttgtctttctgaattaaggtaagggtgaggtttgcttcaatagtgta 23232597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 2709385 - 2709317
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| || |  ||| | || ||||| ||||||||||| |||||||    
T  2709385 ctaaggtaagggtgaggtttacttcaattgtattaattctgaattctgattttgagtttaataggtttt 2709317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 4107579 - 4107511
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||| |||||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||    
T  4107579 ctaaggtaaaggtgaggtttacttcagtagtatagattttgatttctgattttgaatttaacaggtttt 4107511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 22797651 - 22797690
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  22797651 tctgaattaaggtaagggtgaggtttacttcagtagtgta 22797690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 10582536 - 10582585
Alignment:
Q  67 tgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    ||||||||||  ||||||| ||||||||||||||||||| ||||| ||||    
T  10582536 tgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcagtagt 10582585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 14374518 - 14374587
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || ||| |||| |||||  ||||||||||||| |||||    
T  14374518 ctaaggtaagggtgaggtttgcttcattagtatagattctaaattctgatttttgagtttaacaagtttt 14374587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 17415037 - 17415005
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||| |||||||    
T  17415037 taaggtaagggtgaggtttacttcagtagtgta 17415005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 30798843 - 30798911
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||| | ||||  | ||||| ||||| ||||  |||||||||||||    
T  30798843 ctaaggtaagggtaaggtttacttcaagaatgtagttattaaattctgattttgtatttaacaggtttt 30798911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 6860 - 7025
Alignment:
Q  61 ttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggag 159  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  6860 ttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctaattttgagtttaacaggtttttggag 6959  T
Q  160 tgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  6960 tgaaattgaggaattgggttttaattgaatttatggtttttggggtagatattgctgttctgatgt 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 17693 - 17831
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  17693 ctaaggtaagggtgaggtttacttcaatagtgtagattttaaagtctga-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 17791  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| ||| |||||||||||||||||||| || ||||||    
T  17792 gaattcatgatttttggggtagatattgctattctgatgt 17831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 244 - 106
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  244 ctaagttaagggtgaggtttacttcaatagtttagattttaaagtctta-tttgagtttaacaggtttttggagtgaaattgaggaattgggttttaatt 146  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  145 gaatttatggtttttggagtagatattgctgttctgatgt 106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 67 - 225
Target Start/End: Original strand, 17568 - 17725
Alignment:
Q  67 tgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaatt 166  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  ||||||||| |||| ||||||||||    
T  17568 tgtgcatttttcttctgaattaaggtaagggtgaggtttacttcattagtgtagattttaaagtctgattttggttttaacagg-ttttcgagtgaaatt 17666  T
Q  167 gagaaattgggttttaatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||  |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17667 gaagaattgggtattaattgaatttatggtttttggggtagatactgctgttttgatgt 17725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 51068 - 50928
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaa 112  Q
    |||| |||||||||||||| ||||||||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  51068 aaggaagagaaaaccaggagcaagagagaggaaccagaggaatccctttttgctgtgcatttttcattctgaactaaggtaagggtggggtttacttcaa 50969  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| | |||||||||||| ||||||||||||||||||    
T  50968 tagtgtagaatttaaagtctgattttgagtttaacaggttt 50928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 23887454 - 23887599
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23887454 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtggggtttac 23887552  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| |  ||||||||||| |||||||||||||||||||    
T  23887553 ttcaatagtgtagaaattaaagtctgattttgagtttaacaggtttt 23887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 70575 - 70720
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||    
T  70575 aagccaaggaagagagaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttac 70673  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||    
T  70674 ttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 70720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 21605815 - 21605670
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| |||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  21605815 aagccaaggaagagaaaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaattaaggtaagggtggggtttac 21605717  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||    
T  21605716 ttcaatggtgtagaatttaaagtctgattttgagtttaacaggtttt 21605670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 4070602 - 4070747
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||| ||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||    
T  4070602 aagccaaggaagagagaaccaggagcaagagagaaggaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttac 4070700  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||    
T  4070701 ttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 4070747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 32910624 - 32910766
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||||| ||||||||| |||| || || | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||| |     
T  32910624 tgaattaaggtaagggtgagttttacttcagtagtatagatatgaaattctgaattggagtttaacaggtttttggtg-gaaattgagaaattgggtcta 32910722  T
Q  182 aatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |   ||||| ||||||||||||||||||||||||||| ||||||    
T  32910723 agatgaattaatggtttttggggtagatattgctgttctgatgt 32910766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 21123212 - 21123145
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21123212 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt 21123145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 24480658 - 24480805
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggttt 105  Q
    |||| |||| |||||||||||||| ||||||||| ||||||  |||| || |||||||||||||||| | |  | ||   |||||||||||||| |||||    
T  24480658 aagccaaggaagagaaaaccaggagcaagagagaggaaccagaggaacccctttttgctgtgcattt-cttcttcaatttctaaggtaagggtggggttt 24480756  T
Q  106 acttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||    
T  24480757 acttcaatagtgtagaatttaaagtctgattttgagtttaacaggtttt 24480805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 36801546 - 36801409
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||| ||||||||| |||| || || | ||| |||||||| |||||||| |||||||||| | |||||||||||||||||||| |       
T  36801546 ctaaggtaagggtgagttttacttcagtagtatagatatgaaattctgaattggagtttaataggtttttggtg-gaaattgagaaattgggtttaagat 36801448  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatg 224  Q
    ||||| ||| ||||||||||||||||||||||| |||||    
T  36801447 gaattaatgatttttggggtagatattgctgttctgatg 36801409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 1062773 - 1062601
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||    
T  1062773 aagccaaggaagagagaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttac 1062675  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||| | ||||  | || || ||||| |||| |||||||||  |||||| | ||| ||| |||||||||||||    
T  1062674 ttcaagaatgtagttattgaattctgattttgtgtttaacagagttttggtgagaatttgggaaattgggtttt 1062601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 1068167 - 1067995
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttac 107  Q
    |||| |||| ||||| |||||||| ||||||||||||||||  |||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||    
T  1068167 aagccaaggaagagagaaccaggagcaagagagaagaaccagaggaaccc-tttttgctgtgcatttttcattctgaactaaggtaagggtgggatttac 1068069  T
Q  108 ttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||| | ||||  | || || ||||| |||| |||||||||  |||||| | ||| ||| |||||||||||||    
T  1068068 ttcaagaatgtagttattgaattctgattttgtgtttaacagagttttggtgagaatttgggaaattgggtttt 1067995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 17582598 - 17582687
Alignment:
Q  61 ttttgctgtgcattttc-attctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| || |||||||  ||||| ||||||||||||||    
T  17582598 ttttgctgtgcattttttattctgaattaaggtaagggtgaggtttacttcaatagtatagattttaatttctgagtttgagtttaacag 17582687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 22012252 - 22012345
Alignment:
Q  62 tttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  22012252 tttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 22012345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 27038236 - 27038168
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  27038236 ctaaggtaagggtgaggtttacttcaatagtgtagattttagattctgattttgagtttaacaggtttt 27038168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 15642438 - 15642574
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    |||||||||||||||||||||||||||||| ||  | ||||  ||||| | ||||||||||||||||| || | ||| ||||| |||||||| | |   |    
T  15642438 taaggtaagggtgaggtttacttcaatagtatagttattaatttctgattgtgagtttaacaggtttt-ggtgagaa-ttgaggaattgggtataagatg 15642535  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  15642536 aattaatggtttttggggtagatattgctgttctgatgt 15642574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 35243687 - 35243768
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  | || |  ||||| |||||||||||||||||||    
T  35243687 ttttcattctgaattaaggtaagggtgaggtttacttcaatagtgtagttattgatttctgattttgagtttaacaggtttt 35243768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 20851183 - 20851116
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||||||||||||||||    
T  20851183 taaggtaagggtggggtttacttcaatagtgtagatgttaaattctgattttgagtttaacaggtttt 20851116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 30195653 - 30195715
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  30195653 taaggtaagggtgaggtttacttcaatagtgtagattttaaattctgattttgtgtttaacag 30195715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 19702629 - 19702697
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| ||||| ||| | || ||||| |||||||||||||||||||    
T  19702629 ctaaggtaagggtgaggtttacttcaattgtgtagattctgaattctgattttgagtttaacaggtttt 19702697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 20938645 - 20938520
Alignment:
Q  14 aagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttc 110  Q
    |||||||||||||||||||||||||||||||||||||| |  |  ||  ||||||||||||| | |  | ||   |||||||||||||| ||||||||||    
T  20938645 aagggagagaaaaccaggaacaagagagaagaaccaagag--ttgatcattgctgtgcattt-cttcttcaatttctaaggtaagggtggggtttacttc 20938549  T
Q  111 aatagtgtacattttaaagtctgaatttg 139  Q
    ||||| ||| |||||||||||||| ||||    
T  20938548 aatagagtagattttaaagtctgattttg 20938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 11359381 - 11359449
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaat-ttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| |||||| | ||||| | ||||||||||||||||||    
T  11359381 taaggtaagggtggggtttacttcaatagtgtagattttagattctgattattgagtttaacaggtttt 11359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 27730481 - 27730413
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||| ||||||||| |||||||||    
T  27730481 ctaaggtaagggtgaggtttacttcagtattgtagctattaaagtctgattttgagtttgacaggtttt 27730413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 24944439 - 24944299
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| || |||| |||||| |  ||  ||||||||||||||| | ||||| |   |||||||||||||||||||||||||||    
T  24944439 gggagagaaaaccaagaacaagggaaaagagccaaggaa--ccgattttgctgtgcattt-ctttctgcaaatctaaggtaagggtgaggtttacttcaa 24944343  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    | ||||| ||| |  | | ||| ||||| |||||||||||||||    
T  24944342 ttgtgtagattctgtattttgattttgattttaacaggtttttg 24944299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 24653358 - 24653289
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||| ||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  24653358 aactaaggtaagggtgaggtttatttcaatagtgtagttgataaattctgattttgattttaacaggttt 24653289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 24659815 - 24659746
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||| ||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  24659815 aactaaggtaagggtgaggtttatttcaatagtgtagttgataaattctgattttgattttaacaggttt 24659746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 27273174 - 27273080
Alignment:
Q  57 ccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||||| | ||||| |   |||||||||||||||||||||||||| |||| || | |||||  ||||||||||| ||||||||    
T  27273174 ccatttttgctgtgcattt-ctttctgcaattctaaggtaagggtgaggtttacttcagtagtatagactttaatttctgaatttgaatttaacag 27273080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 35045 - 34977
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||||||||||  |  | |  ||||| |||||||||||||||||||    
T  35045 ctaaggtaagggtgaggtttacttcaatagtgtagttactgatttctgattttgagtttaacaggtttt 34977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 22813022 - 22812954
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || ||| | || ||||| |||||||||||||||||||    
T  22813022 ctaaggtaagggtgaggtttgcttcattagtatagattctgaattctgattttgagtttaacaggtttt 22812954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 20725045 - 20724974
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    ||||||||||| |||||||||| ||||| ||||||| ||| |||| |||||  |||||||||||||||||||    
T  20725045 aactaaggtaatggtgaggtttgcttcattagtgtagattctaaattctgatttttgagtttaacaggtttt 20724974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 25174922 - 25174868
Alignment:
Q  62 tttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    |||||||||||||||  ||||||| ||||||||||||||||||| ||||| ||||    
T  25174922 tttgctgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcagtagt 25174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 42552843 - 42552801
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaag 51  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  42552843 aagccaagggagagaaaaccaggaacaagagaggagaaccaag 42552801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 20913470 - 20913530
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    ||||||||||||||||||||||||| |||| || |||||||| ||||| |||| ||||||||    
T  20913470 taaggtaagggtgaggtttacttcagtagtatagattttaaattctgattttg-gtttaaca 20913530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 23291966 - 23291897
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||| ||||| |||| || || || || ||||| ||||| ||||||||||||    
T  23291966 aactaaggtaagggtgaggtttgcttcagtagtatagatattgaattctgattttgattttaacaggttt 23291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 23333606 - 23333537
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||| ||||| |||| || || || || ||||| ||||| ||||||||||||    
T  23333606 aactaaggtaagggtgaggtttgcttcagtagtatagatattgaattctgattttgattttaacaggttt 23333537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 44090215 - 44090296
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| | |||||||||||||||||||||||| | ||||  | |||||  |||| ||||  |||||||||||||    
T  44090215 ttttcattctgaattgaggtaagggtgaggtttacttcaagaatgtagttattaaatcctgattttgtatttaacaggtttt 44090296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 4078414 - 4078346
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| ||||||  | ||||| ||| | ||||  |||||||||||||    
T  4078414 ctaaggtaagggtgaggtttacttcaagagtgtagttattaaattctaattttgtatttaacaggtttt 4078346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 25106597 - 25106637
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  25106597 ttctgaattaaggtaagggtgaggtttacttcagtagtgta 25106637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 11467014 - 11466951
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||| ||||||||| |||| || ||||| |  ||||||||||| ||||||||    
T  11467014 ctaaggtaagggtgagatttacttcagtagtatagattttgatttctgaatttgaatttaacag 11466951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 14564823 - 14564760
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||||||||| |||| || |  ||||  ||||| ||||||||||||||    
T  14564823 ctaaggtaagggtgaggtttacttcagtagtatagacattaatttctgattttgagtttaacag 14564760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 25268249 - 25268175
Alignment:
Q  79 ttctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||  |||| || ||||| ||||  ||||||||||||    
T  25268249 ttctgaattaaggtaagggtgaggtttgcttcagtagtatagtttttgaattctgattttggatttaacaggttt 25268175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 23753830 - 23753765
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    ||||||||||||||||| ||||| ||||||||||||  |  |||| ||||| ||||| ||||||||    
T  23753830 aactaaggtaagggtgaagtttatttcaatagtgtagttgataaattctgattttgattttaacag 23753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 20652 - 20510
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||| ||||| |   |||||||||||||||| ||||||||||    
T  20652 gggagagaaaaccaggaacaagtgagaagaaccaagagaatcc--ttttgctgtgcattttctttctgcaattctaaggtaagggtgagttttacttcaa 20555  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||| || || | ||| | |||||| |||||||||||||||||||    
T  20554 tagtatagatatgaaattatgaattggagtttaacaggtttttgg 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 22932 - 23074
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||| ||||| |   |||||||||||||||| ||||||||||    
T  22932 gggagagaaaaccaggaacaagtgagaagaaccaagagaatcc--ttttgctgtgcattttctttctgcaattctaaggtaagggtgagttttacttcaa 23029  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||| || || | ||| | |||||| |||||||||||||||||||    
T  23030 tagtatagatatgaaattatgaattggagtttaacaggtttttgg 23074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 511754 - 511891
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||| |||| ||  ||||||  ||||| ||||||||||||||||||| |||||||||||||| |||||||| | | | |    
T  511754 taaggtaagggtgaggtttacttcagtagtataggttttaatttctgattttgagtttaacaggtttt-ggagtgaaattgaggaattgggtataagttg 511852  T
Q  187 aatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |||| |||||||||||||||||||||| |||| ||||||    
T  511853 aattaatggtttttggggtagatattgatgttctgatgt 511891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 32634 - 32531
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-catt-ctgaactaaggtaagggtgaggtttacttcaat 113  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  32634 gggagagaaaaccaggaacaagggagaagaaccaagagaatcc--ttttgctgtgcatttttcatttctgaattaaggtaagggtgaggtttacttcaat 32537  T
Q  114 agtgta 119  Q
    ||||||    
T  32536 agtgta 32531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 19289 - 19427
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatg 185  Q
    |||||||||||||||| |||||||||||||| || || | ||| ||| |||| ||||||||||||||||||| | |||||||||||||||||| | |       
T  19289 ctaaggtaagggtgagttttacttcaatagtatagatatgaaattctaaattggagtttaacaggtttttggtg-gaaattgagaaattgggtctaagat 19387  T
Q  186 gaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    ||||| |||||||||||||||||||||| |||| ||||||    
T  19388 gaattaatggtttttggggtagatattgttgttctgatgt 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 9199 - 9266
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9199 aagccaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 8154 - 8024
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatgg 186  Q
    ||||||||||||||||||||||||| |||| ||  ||||||  ||||| ||||||||||||| ||||| |||||||||||||| |||||||| | | | |    
T  8154 taaggtaagggtgaggtttacttcagtagtataggttttaatttctgattttgagtttaacatgtttt-ggagtgaaattgaggaattgggtataagttg 8056  T
Q  187 aatttatggtttttggggtagatattgctgtt 218  Q
    |||| |||||||||||||||||||||| ||||    
T  8055 aattaatggtttttggggtagatattgttgtt 8024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 117 - 220
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgca-ttttca-ttctgaactaaggtaagggtgaggtttacttcaat 113  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||    
T  117 gggagagaaaaccaggaacaagggagaagaaccaagagaatcc--ttttgctgtgcatttttcatttctgaattaaggtaagggtgaggtttactttaat 214  T
Q  114 agtgta 119  Q
    ||||||    
T  215 agtgta 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 241 - 96
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-catt-ctgaactaaggtaagggtgaggttta 106  Q
    |||| ||||||||| |||||||||||||| |||||||| |||| |||| |  |||||||||||||||| |||| |||||||||| |||||||||||||||    
T  241 aagccaagggagaggaaaccaggaacaagtgagaagaatcaagagaattc--ttttgctgtgcatttttcatttctgaactaagttaagggtgaggttta 144  T
Q  107 cttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||| |||| || || || |  ||||| |||||||||||||||||||    
T  143 cttcagtagtatagatgttgatttctgattttgagtttaacaggtttt 96  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 2420 - 2348
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| |||||||||||||| |||||||||| ||||||| || || || ||||| |||| |||||||||||||    
T  2420 tctgaattaaggtaagggtgatgtttacttcagtagtgtagatgtttaattctgattttg-gtttaacaggttt 2348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 17134 - 17002
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||| ||  | |||||||||| ||||||||| ||||||||||||||||||| ||||| ||    
T  17134 gggagagaaaaccaggaacaagggaggagaaccaagagaatccaatt--gatgtgcatttttcattctgaattaaggtaagggtgaggtttgcttcagta 17037  T
Q  115 gtgtacattttaaagtctgaatttgagtttaacag 149  Q
    | ||| || ||||  ||| | ||||||||||||||    
T  17036 gagtagatgttaatttctaattttgagtttaacag 17002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 9252 - 9395
Alignment:
Q  82 tgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    |||| ||||||||||||||  ||||||||| |||| || || | ||  ||||| ||||||||||||||||||||||   |||||||||||||| ||| |     
T  9252 tgaattaaggtaagggtgaattttacttcagtagtatagatatgaatttctgattttgagtttaacaggtttttgggtggaaattgagaaattaggtcta 9351  T
Q  182 aatggaatttatggtttttggggtagatattgctgttttgatgt 225  Q
    |   ||||| |||||||||||||||||||||| |||| ||||||    
T  9352 agatgaattaatggtttttggggtagatattgttgttctgatgt 9395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 14824 - 14959
Alignment:
Q  90 ggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggttttaatggaat 189  Q
    |||||||||||| ||| ||||| |||| || || | ||| ||||| |||||||| |||||||||||||   |||||||||||||| ||| | |   ||||    
T  14824 ggtaagggtgagttttgcttcagtagtatagatatgaaattctgattttgagttgaacaggtttttgggtggaaattgagaaattaggtctaagatgaat 14923  T
Q  190 ttatggtttttggggtagatattgctgttttgatgt 225  Q
    | |||||||||||||||||||||| |||| ||||||    
T  14924 taatggtttttggggtagatattgttgttctgatgt 14959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 2443 - 2583
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttacttcaa 112  Q
    |||||||||||||| ||||||| ||||||| |||||| |  ||  ||||||||||||||| | ||||    |||||||||||||||||||||||||||||    
T  2443 gggagagaaaaccaagaacaagggagaagagccaaggaa--ccgattttgctgtgcattt-ctttctacaaaactaaggtaagggtgaggtttacttcaa 2539  T
Q  113 tagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    | ||||| ||| | || ||||| ||||| |||||||||||||||    
T  2540 ttgtgtagattctgaattctgattttgattttaacaggtttttg 2583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 3972 - 3870
Alignment:
Q  16 gggagagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaata 114  Q
    |||||||||||||| ||||||| ||||||| ||||| ||||||| ||  |||||||||||| | ||||||| |||||||| |||||||||| ||||||||    
T  3972 gggagagaaaaccaagaacaagggagaagagccaagagaatccaatt--gctgtgcatttttccttctgaattaaggtaatggtgaggtttgcttcaata 3875  T
Q  115 gtgta 119  Q
    |||||    
T  3874 gtgta 3870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 10743 - 10668
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||||||| |||| || |||||||| ||||| ||||||||||||||| ||||||||||||    
T  10743 taaggtaagggtgaggtttacttcagtagtatagattttaaattctgattttgagtttaacagg-ttttggagtgaa 10668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 11443 - 11503
Alignment:
Q  60 tttttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  11443 tttttgctgtgcatttttcattctgaattaaggtaagggtgaggtttacttcaatagtgta 11503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 30867 - 30780
Alignment:
Q  67 tgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||| || ||||||| |||||||||||||| |||| ||||| |||| || || || || ||||| |||| |||||||||||||    
T  30867 tgtgcatttgtctttctgaattaaggtaagggtgaagtttgcttcagtagtatagatattgaattctgattttgggtttaacaggttt 30780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 14399 - 14332
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||||||||||||||||    
T  14399 taaggtaagggtggggtttacttcaatagtgtagatgttaaattctgattttgagtttaacaggtttt 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 1456 - 1400
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  1456 ttgctgtgcattttccttctgaattaaggtaagggtgaggtttgcttcaatagtgta 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 11388 - 11321
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||| ||||||||||| ||||| || ||||| ||||| ||||||||||||    
T  11388 ctaaggtaagggtgaggtttacatcaatagtgtagatttttaattctgattttgattttaacaggttt 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 105320 - 105216
Alignment:
Q  44 gaaccaagggaatccatttttgctgtgcattttcattct-gaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagt 142  Q
    |||||||| ||||||  ||||||||||||||||| || | ||| ||||||||||||||||||||||||| |||| || |||||||  | ||| |||||||    
T  105320 gaaccaagagaatcc--ttttgctgtgcattttctttgttgaattaaggtaagggtgaggtttacttcagtagtatagattttaatttttgattttgagt 105223  T
Q  143 ttaacag 149  Q
    |||||||    
T  105222 ttaacag 105216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 37803 - 37886
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||| ||  | || |||||  |||| |||||||||||||||    
T  37803 ttttccttctgaattaaggtaagggtgaagtttacttcaatagtgtagatacttaattctgatgttgattttaacaggtttttg 37886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 135864 - 135947
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||| ||  | || |||||  |||| |||||||||||||||    
T  135864 ttttccttctgaattaaggtaagggtgaagtttacttcaatagtgtagatacttaattctgatgttgattttaacaggtttttg 135947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 26909 - 26840
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  26909 aactaaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 26840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 16105 - 16029
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||| |||| || | |||||  ||||||||||||||||||||  ||||||||||||    
T  16105 ctaaggtaagggtgaggtttacttcagtagtataga-tttaatttctgaatttgagtttaacagagttttggagtgaa 16029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 26752 - 26808
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  26752 ttgctgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcaatagtgta 26808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 20203 - 20127
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    |||||||||||||||||||||||||  |||| || |||| ||  ||||||||||||||||||||  ||||||||||||    
T  20203 ctaaggtaagggtgaggtttacttcggtagtatagattt-aatttctgaatttgagtttaacagagttttggagtgaa 20127  T

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Target: scaffold0054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 59586 - 59658
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||| || ||||| |||| |||||||||||||    
T  59586 tctgaattaaggtaagggtgaggtttacttcagtagtgtagatttttaattctgattttg-gtttaacaggttt 59658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 252864 - 252795
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  252864 aactaaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 252795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 259470 - 259401
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  259470 aactaaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 259401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 186972 - 187041
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||| ||||||||||||||||||||||||  |  |||| ||||| ||||| ||||||||||||    
T  186972 aactaaggtaatggtgaggtttacttcaatagtgtagttgataaattctgattttgattttaacaggttt 187041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 196598 - 196633
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||||    
T  196598 aactaaggtaagggtgaggtttacttcaatagtgta 196633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 155233 - 155138
Alignment:
Q  23 aaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| || |||||||||||||||||| ||||||  |  |  ||||||||| || ||||||  ||||||||||||||||||||||||| |||||||    
T  155233 aaaaccaagagcaagagagaagaaccaagagaatccgatcgt--tgtgcatttgtctttctgatttaaggtaagggtgaggtttacttcagtagtgta 155138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 148046 - 147951
Alignment:
Q  23 aaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||| || |||||||||||||||||| ||||||  |  |  ||||||||| |  ||||||  ||||||||||||||||||||||||| |||||||    
T  148046 aaaaccaagagcaagagagaagaaccaagagaatccgatcgt--tgtgcatttgtttttctgatttaaggtaagggtgaggtttacttcagtagtgta 147951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 1050 - 982
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| ||||||| || ||||  ||||| |||||||||||||||||||    
T  1050 ctaaggtaagggtgaggtttgcttcagtagtgtagatgttaatttctgattttgagtttaacaggtttt 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 43252 - 43324
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||||||||||||||||||||||||||||||||||  |  |||| ||||| ||| | |||||||||||||||    
T  43252 aactaaggtaagggtgaggtttacttcaatagtgtagttgataaattctgatttttattttaacaggtttttg 43324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 48318 - 48390
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttg 156  Q
    ||||||||||||||||||||||||||||||||||||  |  |||| ||||| ||| | |||||||||||||||    
T  48318 aactaaggtaagggtgaggtttacttcaatagtgtagttgataaattctgatttttattttaacaggtttttg 48390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 4259 - 4172
Alignment:
Q  67 tgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||  | || || ||||| ||| ||||||||| |||||    
T  4259 tgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcaatagtgtagttattgaattctgattttaagtttaacaagtttt 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 3274 - 3179
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaaattgagaaattgggtttt 181  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| ||||| |||| |||||||||  |||||| | ||| ||| |||||||||||||    
T  3274 ctaaggtaagggtgaggtttacttcaagaatgtagttattaaattctgattttgtgtttaacagagttttggtgagaatttgtgaaattgggtttt 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 15110 - 15152
Alignment:
Q  9 aagcaaagggagagaaaaccaggaacaagagagaagaaccaag 51  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  15110 aagccaagggagagaaaaccaggaacaagagagaagaaccaag 15152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 45909 - 45975
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  45909 taaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 45975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 50182 - 50248
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  50182 taaggtaagggtgaggtttacttcaatagtgtagatggttaattctgattttgattttaacaggttt 50248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 254513 - 254443
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    ||||||||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||||||||||    
T  254513 taaggtaagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacaggtttttgg 254443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 248001 - 247931
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgg 157  Q
    |||| |||||||||||||| ||||| |||| || || ||||  ||||| ||||||||||||||||||||||    
T  248001 taagataagggtgaggtttgcttcagtagtatagatgttaatttctgattttgagtttaacaggtttttgg 247931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 7622 - 7553
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||| |||||||||||||||||||||||||||||| ||  | || ||||| ||||| ||||||||||||    
T  7622 aactacggtaagggtgaggtttacttcaatagtgtagatgcttaattctgattttgattttaacaggttt 7553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 21906 - 21978
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| ||||||| || || || ||||| ||||| ||||||||||||    
T  21906 tctgaattaaggtaagggtgaggtttacttcagtagtgtagatgtttaattctgattttga-tttaacaggttt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 26103 - 26175
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||||||||| ||||||| || || || ||||| ||||| ||||||||||||    
T  26103 tctgaattaaggtaagggtgaggtttacttcagtagtgtagatgtttaattctgattttga-tttaacaggttt 26175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 9246 - 9178
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||||||||||| || |  ||| | || ||||| |||||||||||||||||||    
T  9246 ctaaggtaagggtgaggtttacttcaattgtattgattctgaattctgattttgagtttaacaggtttt 9178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 8276 - 8208
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || ||| | || ||||| |||||||||||||||||||    
T  8276 ctaaggtaagggtgaggtttgcttcattagtatagattctgaattctgattttgagtttaacaggtttt 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 51025 - 51100
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||||||| | || || |||| ||  ||||||||||||||||||||  ||||||||||||    
T  51025 taaggtaagggtgaggtttacttcagtcgtatagattt-aatttctgaatttgagtttaacagagttttggagtgaa 51100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 64473 - 64548
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttggagtgaa 163  Q
    ||||||||||||||||||||||||| | || || |||| ||  ||||||||||||||||||||  ||||||||||||    
T  64473 taaggtaagggtgaggtttacttcagtcgtatagattt-aatttctgaatttgagtttaacagagttttggagtgaa 64548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 42171 - 42103
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||| |||||||||||||| |||||||||||||  | ||||  | |||||||||||||||||||||||    
T  42171 ctaagctaagggtgaggtttgcttcaatagtgtagttattaatttttgaatttgagtttaacaggtttt 42103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 170892 - 171028
Alignment:
Q  19 agagaaaaccaggaacaagagagaagaaccaagggaatccatttttgctgtgcattttcattctgaa---ctaaggtaagggtgaggtttacttcaatag 115  Q
    ||||||||||| ||||||| ||||||| || ||| || | ||||||||||||||||| | ||||| |   |||||||||||||||||||| ||||| |||    
T  170892 agagaaaaccaagaacaagggagaagagcctagg-aaccgatttttgctgtgcattt-ctttctgcaaatctaaggtaagggtgaggtttgcttcagtag 170989  T
Q  116 tgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    | ||  | || || ||| | |||||||||||||||||||    
T  170990 tatagttattgaattctaattttgagtttaacaggtttt 171028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 322093 - 322025
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||||||| ||||| |||| || || || || ||||| |||||||||||||||||||    
T  322093 ctaaggtaagggtgaggtttgcttcattagtatagatattgaattctgattttgagtttaacaggtttt 322025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 327777 - 327713
Alignment:
Q  90 ggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||||| ||||| |||| || || ||||| ||||| ||||||||||| |||||||    
T  327777 ggtaagggtgaggtttgcttcattagtatagatattaaattctgattttgagtttaataggtttt 327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 2634 - 2704
Alignment:
Q  147 caggtttttggagtgaaattgagaaattgggttttaatggaatttatggtttttggggtagatattgctgtt 218  Q
    ||||||||||| | |||||||||||||||||| | |   ||||| |||||||||||||||||||||||||||    
T  2634 caggtttttggtg-gaaattgagaaattgggtctaagatgaattaatggtttttggggtagatattgctgtt 2704  T

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Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 9500 - 9409
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||| || || |   | ||||| ||||||||||||| |||||    
T  9500 ttgctgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcagtagtatagatgtctgattctgattttgagtttaacaagtttt 9409  T

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Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 28874 - 28803
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctga-atttgagtttaacaggtttt 154  Q
    ||||||||||| |||||||||| ||||| ||||||| ||| |||| |||||  |||||||||||||||||||    
T  28874 aactaaggtaatggtgaggtttgcttcattagtgtagattctaaattctgatttttgagtttaacaggtttt 28803  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 1585 - 1494
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||| || || ||  | ||||| | ||||||||||| |||||    
T  1585 ttgctgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcagtagtatagatgtttgattctgattctgagtttaacaagtttt 1494  T

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Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 11455 - 11410
Alignment:
Q  73 ttttcattctgaactaaggtaagggtgaggtttacttcaatagtgt 118  Q
    |||||||||| |  ||||||||||||||||||| ||||||||||||    
T  11455 ttttcattctaacttaaggtaagggtgaggtttgcttcaatagtgt 11410  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 138068 - 137997
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag-gtttttgg 157  Q
    ||||||||||||||||||| ||||| ||||||| || ||||  ||||| |||||||||||||| ||||||||    
T  138068 taaggtaagggtgaggtttgcttcagtagtgtagatgttaatttctgattttgagtttaacagagtttttgg 137997  T

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Target: scaffold0214 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 14389 - 14451
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||| |||||||||| |||| || |||||||  ||||||||||| ||||||||    
T  14389 taaggtaagggtgaagtttacttcagtagtatagattttaatttctgaatttgaatttaacag 14451  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 10424 - 10334
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||| ||  | || || | ||| |||| |||||||||||||    
T  10424 ttgctgtgcatttttcttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattgaattatgattttgggtttaacaggttt 10334  T

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Target: scaffold0173 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 2340 - 2258
Alignment:
Q  67 tgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    ||||||||| || ||||||| |||||||||||||| |||||||||| ||||||| || || || ||||| |||| ||||||||    
T  2340 tgtgcatttgtccttctgaattaaggtaagggtgatgtttacttcagtagtgtagatatttaattctgattttgggtttaaca 2258  T

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Target: scaffold0466 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 12082 - 12049
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||    
T  12082 ctaaggtaagggtgaggtttacttcaatagtgta 12049  T

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Target: scaffold0320 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 1887 - 1854
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||||||||||||||||||||||    
T  1887 ctaaggtaagggtgaggtttacttcaatagtgta 1854  T

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Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 11470 - 11539
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||||||||| |||||||||| || || || || ||||| ||||| ||||||| ||||    
T  11470 aactaaggtaagggtgaggtttgcttcaatagtataaatattgaattctgattttgattttaacaagttt 11539  T

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Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 7959 - 7890
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||||||||| |||||||||||||||||||  |  |||| ||| | ||||| ||||||||||||    
T  7959 aactaaggtaagggtgtggtttacttcaatagtgtagttgataaattcttattttgattttaacaggttt 7890  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 13853 - 13781
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| ||||||| || || || ||||| ||||| ||||||||||||    
T  13853 tctgaattaaggtaagggtgaggtttgcttcagtagtgtagatgtttaattctgattttga-tttaacaggttt 13781  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 2097 - 2170
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || || || || ||||| |||| |||||||||||||    
T  2097 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatattgaattctgattttgggtttaacaggttt 2170  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 371417 - 371348
Alignment:
Q  84 aactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||||||||||| ||||  |  |||| ||||| ||||| ||||||| ||||    
T  371417 aactaaggtaagggtgaggtttacttcaataatgtagttgataaattctgattttgattttaacaagttt 371348  T

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Target: scaffold0923 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 877 - 785
Alignment:
Q  63 ttgctgtgcatttt-cattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| ||||| |||| ||  | || || ||||| |||| |||||||| |||||    
T  877 ttgctgtgcatttttccttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattgaattctgattttgggtttaacaagtttt 785  T

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Target: scaffold0244 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 837 - 770
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    |||||| ||||||||||||||||| ||||||| |||| || |||||||| ||||| |||| ||||||||    
T  837 tctgaattaaggtaagggtgaggtatacttcagtagtatagattttaaattctgattttg-gtttaaca 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 14646 - 14579
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    |||||| ||||||||||||||||||||||||| || | || |||||||| ||||| |||| ||||||||    
T  14646 tctgaattaaggtaagggtgaggtttacttcagtaatatagattttaaattctgattttg-gtttaaca 14579  T

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Target: scaffold0156 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 26639 - 26584
Alignment:
Q  63 ttgctgtgcattttcattctgaactaaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||||  ||||||| ||||||||||||| ||||| |||||||||||||    
T  26639 ttgctgtgcatttttcttctgaattaaggtaagggtg-ggtttgcttcaatagtgta 26584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 100834 - 100901
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||| |||||||||||||| |||| || || || || ||||| |||||||||||||||||||    
T  100834 ctaaggtaaggatgaggtttacttcagtagtatagatgtt-aattctgattttgagtttaacaggtttt 100901  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 31816 - 31753
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacag 149  Q
    |||||||||||||||||||| |||||||||||||  | ||||  ||||| || |||||||||||    
T  31816 ctaaggtaagggtgaggtttgcttcaatagtgtagttgttaatttctgatttcgagtttaacag 31753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 19657 - 19724
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||||||| |||| || || ||| | || ||||| ||||| ||||||||||||    
T  19657 ctaaggtaagggtgaggtttactgcaattgtatagattctgaattctgattttgattttaacaggttt 19724  T

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Target: scaffold0405 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 2458 - 2524
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||| |||||||||||||  |  | || ||||| ||||| ||||||||||||    
T  2458 taaggtaagggtgaggtttgcttcaatagtgtagttaatgaattctgattttgattttaacaggttt 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 11166 - 11232
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    ||||||||||||||||||| |||||||||||||  |  | || ||||| ||||| ||||||||||||    
T  11166 taaggtaagggtgaggtttgcttcaatagtgtagttaatgaattctgattttgattttaacaggttt 11232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 28303 - 28249
Alignment:
Q  63 ttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| ||||| ||||    
T  28303 ttgctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagt 28249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 401 - 473
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||| ||||||||||||||||||| ||||| |||| || || || || ||||| |||| |||||||||||||    
T  401 tctgaattaaggtaagggtgaggtttgcttcagtagtatagatgtttaattctgattttg-gtttaacaggttt 473  T

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Target: scaffold0661 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 3181 - 3273
Alignment:
Q  66 ctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttttgga 158  Q
    |||||||||| || ||||||| ||||||||||||||||||| ||||| |||| ||  | || || ||||| |||| ||||||||||||| ||||    
T  3181 ctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattgaattctgattttg-gtttaacaggtttatgga 3273  T

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Target: scaffold0583 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 512 - 479
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgta 119  Q
    |||||||||||||||||||| |||||||||||||    
T  512 ctaaggtaagggtgaggtttgcttcaatagtgta 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 46975 - 47024
Alignment:
Q  63 ttgctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttca 111  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  46975 ttgctgtgcatttgtctttctgaattaaggtaagggtgaggtttgcttca 47024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 80304 - 80368
Alignment:
Q  84 aactaaggtaagggtgaggtttac-ttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    |||||||||||||||||||||||| ||||||||| || ||| | || ||||| |||||||||||||    
T  80304 aactaaggtaagggtgaggtttactttcaatagtatagattat-aattctgattttgagtttaaca 80368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 100026 - 100090
Alignment:
Q  84 aactaaggtaagggtgaggtttac-ttcaatagtgtacattttaaagtctgaatttgagtttaaca 148  Q
    |||||||||||||||||||||||| ||||||||| || ||| | || ||||| |||||||||||||    
T  100026 aactaaggtaagggtgaggtttactttcaatagtatagattat-aattctgattttgagtttaaca 100090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 7199 - 7111
Alignment:
Q  66 ctgtgcattt-tcattctgaactaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggttt 153  Q
    |||||||||| || ||||||| ||||||||||||||||||| ||||| |||| ||  | ||  | ||||| |||| |||||||||||||    
T  7199 ctgtgcatttgtccttctgaattaaggtaagggtgaggtttgcttcagtagtatagttattggattctgattttgggtttaacaggttt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 11394 - 11462
Alignment:
Q  86 ctaaggtaagggtgaggtttacttcaatagtgtacattttaaagtctgaatttgagtttaacaggtttt 154  Q
    ||||||||||||||||||||||||||| | ||||  | || || ||||| ||||  |||||||||||||    
T  11394 ctaaggtaagggtgaggtttacttcaagaatgtagttattgaattctgattttgtatttaacaggtttt 11462  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 35 - 3
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||| |||||||||||||||||||    
T  35 taaggtaagggtggggtttacttcaatagtgta 3  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 29405 - 29437
Alignment:
Q  87 taaggtaagggtgaggtttacttcaatagtgta 119  Q
    ||||||||||||| |||||||||||||||||||    
T  29405 taaggtaagggtggggtttacttcaatagtgta 29437  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 46547 - 46511
Alignment:
Q  80 tctgaactaaggtaagggtgaggtttacttcaatagt 116  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  46547 tctgaattaaggtaagggtgaggtttacttcagtagt 46511  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 266151 - 266102
Alignment:
Q  60 tttttgctgtgcattttcattctg---aactaaggtaagggtgaggtttac 107  Q
    |||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  266151 tttttgctgtgcattttc-ttctgcaaaactaaggtaagggtgaggtttac 266102  T

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