View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10721_low_27 (Length: 227)

Name: NF10721_low_27
Description: NF10721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10721_low_27
NF10721_low_27
[»] chr6 (30 HSPs)
chr6 (1-227)||(7972592-7972815)
chr6 (28-219)||(21527311-21527502)
chr6 (10-219)||(8049091-8049301)
chr6 (1-220)||(25056400-25056632)
chr6 (28-219)||(9095755-9095947)
chr6 (26-219)||(2437820-2438014)
chr6 (1-205)||(4665804-4666015)
chr6 (1-168)||(23410446-23410613)
chr6 (28-173)||(6111110-6111255)
chr6 (107-220)||(26252683-26252796)
chr6 (7-128)||(34889064-34889189)
chr6 (1-205)||(4184615-4184811)
chr6 (31-155)||(14093775-14093900)
chr6 (36-98)||(26252586-26252648)
chr6 (162-221)||(7833442-7833501)
chr6 (1-42)||(9095702-9095743)
chr6 (1-42)||(21527258-21527299)
chr6 (43-173)||(31660455-31660580)
chr6 (51-134)||(4122778-4122861)
chr6 (162-208)||(14094280-14094326)
chr6 (2-54)||(8460935-8460988)
chr6 (1-54)||(6111059-6111113)
chr6 (65-111)||(9353140-9353186)
chr6 (76-155)||(6396639-6396720)
chr6 (158-219)||(17193138-17193199)
chr6 (186-219)||(21526905-21526938)
chr6 (187-219)||(8049963-8049995)
chr6 (55-87)||(8460870-8460902)
chr6 (193-221)||(23777274-23777302)
chr6 (158-222)||(27313477-27313541)
[»] chr7 (54 HSPs)
chr7 (1-216)||(4962888-4963110)
chr7 (1-219)||(35793066-35793287)
chr7 (28-204)||(39430587-39430763)
chr7 (1-219)||(4567226-4567443)
chr7 (1-211)||(25290538-25290755)
chr7 (28-219)||(15643245-15643437)
chr7 (28-219)||(24394211-24394401)
chr7 (6-212)||(37124091-37124299)
chr7 (1-219)||(10534967-10535185)
chr7 (82-218)||(14771449-14771585)
chr7 (82-218)||(15221901-15222037)
chr7 (1-225)||(8614788-8615007)
chr7 (28-219)||(3835651-3835840)
chr7 (36-173)||(2798562-2798698)
chr7 (11-219)||(28226458-28226667)
chr7 (11-219)||(36412806-36413012)
chr7 (31-216)||(27723203-27723388)
chr7 (25-219)||(2273495-2273690)
chr7 (1-134)||(16196781-16196914)
chr7 (43-221)||(46672039-46672209)
chr7 (48-219)||(39617447-39617621)
chr7 (11-174)||(39599661-39599822)
chr7 (32-100)||(4678432-4678500)
chr7 (51-117)||(39432604-39432670)
chr7 (28-156)||(7809181-7809309)
chr7 (77-212)||(39247325-39247460)
chr7 (3-94)||(2271863-2271953)
chr7 (1-46)||(14771368-14771413)
chr7 (1-46)||(15221820-15221865)
chr7 (48-174)||(44549986-44550112)
chr7 (1-46)||(3835602-3835647)
chr7 (36-168)||(41747201-41747331)
chr7 (28-94)||(27229608-27229675)
chr7 (144-214)||(38707223-38707292)
chr7 (51-129)||(43368785-43368863)
chr7 (1-42)||(15643449-15643490)
chr7 (185-225)||(2271318-2271358)
chr7 (48-222)||(12394023-12394204)
chr7 (80-174)||(27229804-27229899)
chr7 (48-98)||(39427432-39427483)
chr7 (3-42)||(46671971-46672010)
chr7 (54-117)||(10026226-10026291)
chr7 (1-42)||(12394239-12394280)
chr7 (179-220)||(39426216-39426257)
chr7 (3-42)||(24394160-24394199)
chr7 (155-202)||(39430784-39430831)
chr7 (186-227)||(10534401-10534442)
chr7 (186-219)||(16197453-16197486)
chr7 (186-219)||(25291075-25291108)
chr7 (1-42)||(27723404-27723444)
chr7 (186-219)||(39434553-39434586)
chr7 (186-219)||(46671618-46671651)
chr7 (77-208)||(1719906-1720038)
chr7 (193-221)||(31430537-31430565)
[»] scaffold1130 (2 HSPs)
scaffold1130 (1-223)||(293-512)
scaffold1130 (187-219)||(834-866)
[»] chr5 (56 HSPs)
chr5 (1-219)||(32717936-32718157)
chr5 (1-219)||(16365643-16365863)
chr5 (4-208)||(12436695-12436897)
chr5 (1-227)||(1583362-1583589)
chr5 (82-219)||(17557868-17558005)
chr5 (4-165)||(19931802-19931962)
chr5 (4-156)||(19924863-19925013)
chr5 (28-212)||(14654862-14655030)
chr5 (1-219)||(17201140-17201369)
chr5 (48-219)||(17202832-17203002)
chr5 (25-213)||(11992195-11992387)
chr5 (1-219)||(18413324-18413527)
chr5 (28-219)||(20201544-20201739)
chr5 (1-219)||(8544693-8544906)
chr5 (4-117)||(19922151-19922263)
chr5 (1-166)||(39614797-39614968)
chr5 (1-216)||(36437304-36437515)
chr5 (1-219)||(43346630-43346857)
chr5 (86-219)||(28619899-28620034)
chr5 (25-177)||(32474131-32474282)
chr5 (98-226)||(36060245-36060373)
chr5 (107-219)||(249631-249743)
chr5 (1-215)||(42674035-42674260)
chr5 (81-213)||(19803578-19803708)
chr5 (48-117)||(1590163-1590232)
chr5 (107-219)||(37269360-37269472)
chr5 (1-91)||(6428276-6428367)
chr5 (29-148)||(36246269-36246389)
chr5 (122-219)||(11825533-11825630)
chr5 (47-134)||(39940311-39940399)
chr5 (51-98)||(249549-249596)
chr5 (7-98)||(6434031-6434122)
chr5 (1-52)||(17202347-17202398)
chr5 (56-168)||(31889466-31889580)
chr5 (38-92)||(37269522-37269576)
chr5 (1-49)||(20201743-20201792)
chr5 (4-56)||(19133422-19133476)
chr5 (48-142)||(17591635-17591728)
chr5 (186-219)||(28620647-28620680)
chr5 (66-168)||(39585777-39585881)
chr5 (2-42)||(14655042-14655082)
chr5 (1-46)||(249478-249520)
chr5 (29-95)||(18552493-18552560)
chr5 (193-223)||(4175711-4175741)
chr5 (119-169)||(10704409-10704459)
chr5 (28-74)||(36060204-36060249)
chr5 (4-42)||(37269588-37269626)
chr5 (50-160)||(39584793-39584903)
chr5 (1-42)||(11992147-11992188)
chr5 (188-221)||(19831766-19831799)
chr5 (1-34)||(32474294-32474327)
chr5 (192-220)||(9127581-9127609)
chr5 (58-98)||(11825447-11825487)
chr5 (187-219)||(20202288-20202320)
chr5 (43-127)||(36194021-36194105)
chr5 (186-214)||(39585343-39585371)
[»] chr3 (60 HSPs)
chr3 (28-219)||(25841918-25842109)
chr3 (1-216)||(45646513-45646732)
chr3 (1-225)||(20841225-20841446)
chr3 (1-219)||(34668592-34668811)
chr3 (61-219)||(21959700-21959857)
chr3 (1-221)||(5493461-5493686)
chr3 (48-219)||(45759957-45760128)
chr3 (1-204)||(2093701-2093914)
chr3 (1-219)||(37030929-37031141)
chr3 (28-219)||(27817328-27817518)
chr3 (11-219)||(54675151-54675356)
chr3 (28-214)||(9588660-9588847)
chr3 (60-219)||(19234007-19234166)
chr3 (40-212)||(296351-296524)
chr3 (1-177)||(15638443-15638618)
chr3 (57-219)||(7259718-7259864)
chr3 (3-98)||(44940825-44940921)
chr3 (23-173)||(19578288-19578440)
chr3 (42-219)||(27264025-27264200)
chr3 (66-142)||(1272413-1272489)
chr3 (2-176)||(2440612-2440781)
chr3 (1-101)||(23701899-23702003)
chr3 (1-177)||(375698-375877)
chr3 (2-219)||(16237547-16237747)
chr3 (48-168)||(19187669-19187789)
chr3 (25-129)||(23272054-23272157)
chr3 (1-101)||(23720354-23720459)
chr3 (1-101)||(23738810-23738915)
chr3 (35-98)||(21934474-21934537)
chr3 (17-203)||(25342350-25342537)
chr3 (1-111)||(23772195-23772312)
chr3 (8-117)||(45667468-45667578)
chr3 (123-216)||(38751175-38751268)
chr3 (6-96)||(15772305-15772393)
chr3 (72-174)||(1405182-1405284)
chr3 (1-96)||(3751492-3751595)
chr3 (138-219)||(21934603-21934684)
chr3 (107-207)||(44940956-44941055)
chr3 (51-118)||(633291-633358)
chr3 (51-140)||(29556509-29556598)
chr3 (25-129)||(20140992-20141095)
chr3 (1-98)||(38751045-38751140)
chr3 (1-46)||(2599144-2599189)
chr3 (186-223)||(2599660-2599697)
chr3 (1-49)||(7259644-7259693)
chr3 (186-223)||(16236972-16237009)
chr3 (123-219)||(2598991-2599087)
chr3 (13-98)||(25479620-25479709)
chr3 (123-203)||(45667398-45667478)
chr3 (1-42)||(21959661-21959702)
chr3 (2-42)||(25841866-25841906)
chr3 (48-134)||(38416356-38416447)
chr3 (76-174)||(10614555-10614653)
chr3 (1-42)||(296546-296587)
chr3 (186-219)||(7259285-7259318)
chr3 (193-222)||(48214044-48214073)
chr3 (2-34)||(9588864-9588896)
chr3 (2-46)||(42735566-42735610)
chr3 (1-41)||(45759881-45759921)
chr3 (191-219)||(46973400-46973428)
[»] chr1 (44 HSPs)
chr1 (1-219)||(1674721-1674944)
chr1 (1-224)||(6295705-6295930)
chr1 (28-219)||(11238231-11238422)
chr1 (3-208)||(2655638-2655844)
chr1 (3-217)||(36319926-36320143)
chr1 (35-210)||(788278-788451)
chr1 (1-210)||(39386615-39386823)
chr1 (1-219)||(13254717-13254938)
chr1 (41-223)||(31623110-31623292)
chr1 (107-219)||(52414825-52414937)
chr1 (20-219)||(3900933-3901130)
chr1 (20-219)||(50488740-50488937)
chr1 (1-98)||(52414972-52415070)
chr1 (3-98)||(32769027-32769124)
chr1 (3-98)||(4671450-4671546)
chr1 (55-219)||(43021044-43021208)
chr1 (33-129)||(10430513-10430609)
chr1 (2-214)||(4396014-4396226)
chr1 (36-219)||(40519193-40519385)
chr1 (36-98)||(23699422-23699484)
chr1 (107-216)||(30279925-30280034)
chr1 (107-219)||(32768881-32768992)
chr1 (107-213)||(23699519-23699626)
chr1 (43-134)||(10101672-10101762)
chr1 (70-117)||(21535845-21535892)
chr1 (1-138)||(37710419-37710560)
chr1 (77-147)||(23698747-23698817)
chr1 (36-148)||(52281700-52281813)
chr1 (48-96)||(39157128-39157176)
chr1 (28-98)||(19269741-19269812)
chr1 (1-42)||(788217-788258)
chr1 (162-219)||(4671313-4671370)
chr1 (76-168)||(23697783-23697876)
chr1 (36-92)||(30280075-30280130)
chr1 (48-174)||(21967163-21967289)
chr1 (1-42)||(23699360-23699401)
chr1 (1-49)||(23697665-23697716)
chr1 (188-223)||(9361949-9361984)
chr1 (3-42)||(31623059-31623098)
chr1 (188-223)||(51974397-51974432)
chr1 (162-219)||(15660567-15660624)
chr1 (32-97)||(32186544-32186609)
chr1 (186-223)||(32769596-32769633)
chr1 (193-221)||(28678999-28679027)
[»] chr8 (51 HSPs)
chr8 (1-219)||(25496561-25496781)
chr8 (1-219)||(32233540-32233760)
chr8 (28-219)||(3443711-3443902)
chr8 (4-215)||(9455149-9455367)
chr8 (3-219)||(25400382-25400600)
chr8 (28-177)||(7578188-7578338)
chr8 (40-219)||(34146095-34146274)
chr8 (36-219)||(2742927-2743094)
chr8 (4-196)||(27231709-27231905)
chr8 (1-155)||(1530550-1530703)
chr8 (43-219)||(4418482-4418657)
chr8 (28-219)||(1358897-1359082)
chr8 (1-219)||(16393632-16393836)
chr8 (28-175)||(16599358-16599506)
chr8 (11-219)||(41411430-41411636)
chr8 (43-213)||(14896547-14896717)
chr8 (107-219)||(29315957-29316069)
chr8 (20-219)||(40557123-40557319)
chr8 (1-98)||(29315824-29315922)
chr8 (14-208)||(38401487-38401684)
chr8 (1-219)||(34038819-34039022)
chr8 (76-192)||(30887895-30888010)
chr8 (4-142)||(39628238-39628386)
chr8 (4-142)||(39637788-39637936)
chr8 (51-117)||(5870769-5870835)
chr8 (48-113)||(38457289-38457354)
chr8 (6-118)||(4418848-4418957)
chr8 (55-155)||(7695303-7695403)
chr8 (4-139)||(1256683-1256821)
chr8 (111-205)||(3741536-3741629)
chr8 (36-98)||(3741668-3741730)
chr8 (36-98)||(36682591-36682652)
chr8 (60-170)||(43026703-43026814)
chr8 (1-42)||(3443658-3443699)
chr8 (1-45)||(1358846-1358890)
chr8 (43-155)||(45083023-45083135)
chr8 (1-48)||(3741741-3741788)
chr8 (1-46)||(11087218-11087263)
chr8 (162-222)||(43553446-43553506)
chr8 (76-172)||(44666214-44666310)
chr8 (1-35)||(7695224-7695258)
chr8 (186-220)||(32234291-32234325)
chr8 (4-42)||(34146296-34146334)
chr8 (186-223)||(7695422-7695459)
chr8 (1-46)||(11384707-11384752)
chr8 (186-219)||(27232276-27232309)
chr8 (1-46)||(38457384-38457429)
chr8 (162-219)||(39303719-39303776)
chr8 (10-38)||(7578144-7578172)
chr8 (191-219)||(11707713-11707741)
chr8 (193-225)||(14263518-14263550)
[»] chr4 (67 HSPs)
chr4 (2-219)||(9089573-9089791)
chr4 (3-208)||(45635409-45635615)
chr4 (51-222)||(38434244-38434416)
chr4 (2-219)||(50720811-50721030)
chr4 (1-220)||(54982709-54982932)
chr4 (1-219)||(38840370-38840593)
chr4 (28-220)||(46195657-46195849)
chr4 (28-215)||(24538291-24538477)
chr4 (28-219)||(19443555-19443745)
chr4 (1-155)||(37209936-37210097)
chr4 (59-219)||(38045323-38045484)
chr4 (43-219)||(45666211-45666387)
chr4 (62-219)||(24074131-24074288)
chr4 (36-147)||(37371399-37371509)
chr4 (72-210)||(6949013-6949150)
chr4 (1-111)||(2492863-2492975)
chr4 (120-219)||(17330740-17330839)
chr4 (28-219)||(49299850-49300037)
chr4 (107-219)||(33889488-33889599)
chr4 (3-98)||(33889634-33889729)
chr4 (1-150)||(34031957-34032105)
chr4 (15-156)||(20782443-20782584)
chr4 (82-219)||(21342249-21342380)
chr4 (49-174)||(23529471-23529597)
chr4 (10-98)||(667994-668083)
chr4 (107-219)||(668118-668230)
chr4 (123-219)||(49262924-49263020)
chr4 (43-169)||(21956479-21956605)
chr4 (48-154)||(25490439-25490545)
chr4 (1-117)||(25493839-25493965)
chr4 (1-98)||(47944414-47944511)
chr4 (1-46)||(19443504-19443549)
chr4 (148-223)||(53392558-53392632)
chr4 (1-46)||(1821526-1821571)
chr4 (131-214)||(1821657-1821740)
chr4 (186-225)||(19443026-19443065)
chr4 (39-98)||(41502571-41502630)
chr4 (28-98)||(1821574-1821644)
chr4 (3-56)||(41502632-41502685)
chr4 (1-98)||(49263029-49263122)
chr4 (1-46)||(49299798-49299843)
chr4 (71-174)||(46196822-46196926)
chr4 (3-46)||(6949219-6949262)
chr4 (60-118)||(33808886-33808944)
chr4 (1-99)||(53393381-53393479)
chr4 (1-49)||(24538238-24538287)
chr4 (186-219)||(37209530-37209563)
chr4 (1-42)||(37371338-37371379)
chr4 (1-46)||(45666413-45666458)
chr4 (1-34)||(46195866-46195899)
chr4 (186-223)||(49299302-49299339)
chr4 (28-98)||(53370405-53370477)
chr4 (51-127)||(30913537-30913612)
chr4 (2-49)||(53370331-53370378)
chr4 (162-221)||(53599990-53600049)
chr4 (3-42)||(55343853-55343892)
chr4 (48-98)||(29971530-29971580)
chr4 (31-117)||(38044911-38044996)
chr4 (18-117)||(46016561-46016662)
chr4 (192-221)||(18135284-18135313)
chr4 (162-219)||(38617511-38617568)
chr4 (60-97)||(42219055-42219092)
chr4 (192-221)||(49122494-49122523)
chr4 (43-111)||(2684696-2684763)
chr4 (187-219)||(33890207-33890239)
chr4 (187-219)||(37210119-37210151)
chr4 (123-219)||(41502441-41502536)
[»] chr2 (64 HSPs)
chr2 (28-219)||(27746379-27746570)
chr2 (28-219)||(150264-150455)
chr2 (28-218)||(4959369-4959558)
chr2 (1-215)||(21252495-21252712)
chr2 (28-219)||(25965860-25966051)
chr2 (1-219)||(16806511-16806728)
chr2 (1-219)||(16845792-16846009)
chr2 (3-214)||(20171400-20171612)
chr2 (36-208)||(34424771-34424943)
chr2 (1-219)||(15507363-15507585)
chr2 (1-219)||(38589257-38589479)
chr2 (28-221)||(11073940-11074135)
chr2 (39-190)||(42756731-42756882)
chr2 (1-156)||(44898085-44898244)
chr2 (1-219)||(41540956-41541180)
chr2 (28-219)||(1397366-1397557)
chr2 (36-219)||(20891301-20891479)
chr2 (48-219)||(3309845-3310015)
chr2 (31-174)||(4700951-4701094)
chr2 (28-219)||(11083814-11084004)
chr2 (36-214)||(36244031-36244209)
chr2 (2-168)||(45273373-45273542)
chr2 (11-155)||(1770148-1770293)
chr2 (1-147)||(33659686-33659834)
chr2 (60-168)||(32113373-32113482)
chr2 (28-160)||(158078-158210)
chr2 (51-173)||(4316654-4316777)
chr2 (1-155)||(13140849-13141002)
chr2 (28-101)||(7486303-7486376)
chr2 (1-98)||(408448-408545)
chr2 (58-155)||(33659532-33659630)
chr2 (22-159)||(2218173-2218312)
chr2 (51-112)||(12411667-12411728)
chr2 (51-112)||(12423727-12423788)
chr2 (37-169)||(29882161-29882294)
chr2 (43-175)||(37360292-37360425)
chr2 (1-53)||(29408726-29408778)
chr2 (41-155)||(13386399-13386512)
chr2 (1-49)||(25965811-25965860)
chr2 (1-42)||(27746582-27746623)
chr2 (60-168)||(41117387-41117496)
chr2 (36-117)||(29408784-29408867)
chr2 (162-208)||(5783567-5783613)
chr2 (1-49)||(7486251-7486300)
chr2 (162-219)||(29408896-29408953)
chr2 (1-42)||(34424710-34424751)
chr2 (61-177)||(42872273-42872389)
chr2 (36-112)||(37814534-37814610)
chr2 (1-42)||(158025-158066)
chr2 (1-42)||(1397567-1397608)
chr2 (1-46)||(11073889-11073934)
chr2 (1-42)||(12411765-12411806)
chr2 (1-42)||(12423825-12423866)
chr2 (10-42)||(42756905-42756937)
chr2 (193-223)||(32674187-32674217)
chr2 (43-81)||(33024255-33024293)
chr2 (1-42)||(4316802-4316843)
chr2 (1-34)||(4959316-4959349)
chr2 (65-169)||(6674513-6674622)
chr2 (48-89)||(31741919-31741960)
chr2 (2-46)||(150215-150258)
chr2 (192-220)||(11222552-11222580)
chr2 (188-224)||(31025172-31025208)
chr2 (2-34)||(42872220-42872252)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-193)||(256682-256873)
scaffold0005 (28-215)||(272361-272548)
scaffold0005 (3-42)||(272310-272349)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-117)||(46537-46650)
[»] scaffold0118 (2 HSPs)
scaffold0118 (43-219)||(14831-15006)
scaffold0118 (36-116)||(15241-15317)
[»] scaffold0188 (1 HSPs)
scaffold0188 (51-171)||(6399-6519)
[»] scaffold1327 (1 HSPs)
scaffold1327 (43-219)||(784-959)
[»] scaffold0012 (1 HSPs)
scaffold0012 (144-220)||(202233-202309)
[»] scaffold1801 (1 HSPs)
scaffold1801 (3-89)||(1236-1323)
[»] scaffold0159 (1 HSPs)
scaffold0159 (162-208)||(37030-37076)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-225)||(195968-196005)


Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7972592 - 7972815
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7972592 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaaaaacaaactttagtttttcaaatatataacattaattagttttattgaaaaata 7972691  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||   ||||||||||    
T  7972692 ttagaataattgacaaagtgtataattgataaatcataccctcaaaatatcaaaacaacatttaaataggaacgaaaaattcaccct---aagacactta 7972788  T
Q  201 aaaaggaacggagggagtactatattt 227  Q
    |||||||||||||||||||||||||||    
T  7972789 aaaaggaacggagggagtactatattt 7972815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 21527311 - 21527502
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  21527311 aaacaaactttgtttaaaaaaacaaactttagtttttcaaatataaagcattaattagttttaatgaaaaatattagaataattgacaaagggtttaatt 21527410  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || |||||||||||| ||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21527411 gacaaatcatacccttaaaataccaaaacgacaattaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaacggagggagta 21527502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 8049301 - 8049091
Alignment:
Q  10 aaatttgaagataacaagaaacaaattttgtttaa-aacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaata 108  Q
    |||| |||||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||| ||||||||||||||||||||||| || ||| ||    
T  8049301 aaatgtgaagataacaagaaacaaattttgtttaagaaaaacaaactttagttttccaaatagatatcattaattagttttattgaaaaagataagagta 8049202  T
Q  109 attgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    |||||||||| ||| ||||||||||||||||| | |||||| |||||  ||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  8049201 attgacaaagggtaaaattgataaatcatacctttaaaatatcaaaaagacaattaaataagaacgaaaaattcaccctaaaaagacacttaaaaaggaa 8049102  T
Q  209 cggagggagta 219  Q
    | |||||||||    
T  8049101 cagagggagta 8049091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 25056632 - 25056400
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaac------------aaactttagtttttcaaatatatagcattaattagttt 88  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||            ||||||||||||| |||||| |||||||||||||||||    
T  25056632 attttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaactttgtttagaaaaaactttagttttccaaatagatagcattaattagttt 25056533  T
Q  89 tattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaatac-caaaacaacatttaaataggaacgaaatattcaccct 187  Q
    |||||||||| || ||| |||||||||||| |||| ||||| |||||||||||| |||||||  ||||  || ||||||||||||||||| |||||||||    
T  25056532 tattgaaaaagataagagtaattgacaaagagtatgattgacaaatcatacccttaaaatacagaaaaagacttttaaataggaacgaaaaattcaccct 25056433  T
Q  188 aaaaagacacttaaaaaggaacggagggagtac 220  Q
    |||||||||||||||||||||||||||||||||    
T  25056432 aaaaagacacttaaaaaggaacggagggagtac 25056400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 9095755 - 9095947
Alignment:
Q  28 aaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  9095755 aaacaaactttgtttaaaaaaaacaaattttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtataat 9095854  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| |||||||||||| ||||||| ||||| ||| ||||||| |||||||| ||||||||||||| |||  |||||||||||| |||| ||||    
T  9095855 tgacaaatcatacccttaaaatactaaaacgacagttaaataagaacgaaaaattcaccctaaaacgacggttaaaaaggaacagaggaagta 9095947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 2437820 - 2438014
Alignment:
Q  26 agaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataa 125  Q
    ||||||||| |||||| |||| || ||| ||||||||| |||||| ||| ||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  2437820 agaaacaaactttgttaaaaaaaaaaaaatttagttttccaaatagatatcattaattagttttattgaaaaaaataagaataattgacaaagggtataa 2437919  T
Q  126 ttgataaatcataccctcaaaataccaaaacaacatttaaataggaac-gaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||| |||||||||||| ||||| ||||||  ||| ||||||| ||||  ||| |||||||||| |||||||| |||||||||||||||||||||    
T  2437920 ttgacaaatcatacccttaaaattccaaaaagacagttaaataagaacaaaaaaattcaccctagaaagacacctaaaaaggaacggagggagta 2438014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4666015 - 4665804
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt------aaaacaa-caaactttagtttttcaaatatatagcattaattagttttattg 93  Q
    ||||||||||||||| ||||||||||||||||||||||||||      ||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  4666015 attttgtttaaatttaaagataacaagaaacaaattttgttttaaaacaaaacaaacaaactttagtttttcaaatatatagcattaattagttttattt 4665916  T
Q  94 aaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaag 193  Q
    |||||||| ||| ||||||| |||  |||||||||| ||||||||  || ||||||  ||||  ||| |||||||| ||||||| ||||  | |||||||    
T  4665915 aaaaatataagagtaattgataaatggtataattgacaaatcatatgcttaaaatattaaaatgacagttaaatagaaacgaaaaattcgacttaaaaag 4665816  T
Q  194 acacttaaaaag 205  Q
    ||| ||||||||    
T  4665815 acaattaaaaag 4665804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23410613 - 23410446
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| || ||||||||| | | |||||||||| ||||||||||||||||| ||||| |    
T  23410613 attttgtttaaattttaagataacaagaaacaaactttgttaaaaaaaaaaaactttagctatccaaatatataacattaattagttttattaaaaaaga 23410514  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaata 168  Q
    | | | |||||  ||||| |||||||||| ||||| || ||| |||||| ||||| ||  ||||||||    
T  23410513 taaaagtaatttgcaaagagtataattgacaaatcgtatccttaaaatatcaaaataatttttaaata 23410446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 6111110 - 6111255
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||| || ||| ||||||| |||  |||||| |    
T  6111110 aaacaaactttgtttaaaaaaacaaactttagttttccaaatatataacattaattagttttatttaaaaagataagagtaattgataaatggtataact 6111209  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaac 173  Q
    || ||||| |||  | ||||||| ||||| ||| || |||| ||||    
T  6111210 gacaaatcgtactattaaaatactaaaacgacagttgaatatgaac 6111255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 26252683 - 26252796
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||  |||||||||| ||||| |||| | |||||| |||||| ||| |||||||||||| ||| |||||||||| || |||||||||||||     
T  26252683 taattgacaaatggtataattgacaaatcgtacctttaaaatatcaaaacgacagttaaataggaacaaaaaattcaccctagaacgacacttaaaaagt 26252782  T
Q  207 aacggagggagtac 220  Q
    ||||||||||||||    
T  26252783 aacggagggagtac 26252796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 34889189 - 34889064
Alignment:
Q  7 tttaaatttgaagataacaagaaacaaattttgtttaa----aacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatt 102  Q
    ||||| ||| |||||||||| ||||||||||||||| |    || ||||||||||| ||||||||||||||| || |||||||||||||||||||| ||     
T  34889189 tttaacttttaagataacaataaacaaattttgtttcagagaaaaaacaaactttaatttttcaaatatataacaataattagttttattgaaaaagata 34889090  T
Q  103 agaataattgacaaagtgtataattg 128  Q
    ||| ||||| |||||| |||||||||    
T  34889089 agagtaattaacaaagagtataattg 34889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4184811 - 4184615
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||  |||||    |      |||||||||||||||||||| ||||||| |||||||    
T  4184811 attttgtttaaatttaaagataacaagaaacaaattttgttttaaa--acaaaacaaa------caaatatatagcattaattaattttatttaaaaata 4184720  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | ||| ||||||| |||  | |||||||| ||||||||  || ||||||  ||||  ||| |||||||| ||||||| ||||  | |||||||||| |||    
T  4184719 taagagtaattgataaatagaataattgacaaatcatatgcttaaaatattaaaatgacagttaaatagaaacgaaaaattcgacttaaaaagacaatta 4184620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 14093775 - 14093900
Alignment:
Q  31 caaattttgtttaaaacaac-aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattga 129  Q
    |||| ||||||||||| ||  |||||||||||||  ||||  ||||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||    
T  14093775 caaactttgtttaaaaaaaataaactttagttttcaaaatcgatagcattaattagttttattgaaaaagataagagtaattgacaaagagtataattga 14093874  T
Q  130 taaatcataccctcaaaataccaaaa 155  Q
     |||||  ||| | ||||||||||||    
T  14093875 caaatcggaccattaaaataccaaaa 14093900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 26252586 - 26252648
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  26252586 tttgtttaaaaaaacaaactttatttttccaaatatatagcattaattagttttattaaaaaa 26252648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 7833501 - 7833442
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  7833501 ttaaataggaacaaaaaattcactctaaaaagacacttaaaaaagaacggagggagtact 7833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9095702 - 9095743
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9095702 attttgtttaaatttgaagataacaagaaacaaattttgttt 9095743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21527258 - 21527299
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21527258 attttgtttaaatttgaagataacaagaaacaaattttgttt 21527299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 31660580 - 31660455
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||    | || | |||| || | |||||| ||  ||||| ||||||    
T  31660580 aaaataacaaactttagtttttcaaatagatagcatt-attagttttattgaaaaa----ataagagttgagaaggggtataagtggcaaatcgtaccct 31660486  T
Q  143 caaaataccaaaacaacatttaaataggaac 173  Q
     |||||||||||| |||| ||||||| ||||    
T  31660485 taaaataccaaaataacagttaaatatgaac 31660455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 4122861 - 4122778
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaat 134  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||||||||| || ||| ||||||| |||  |||||| ||| ||||    
T  4122861 aaactttactttttcaaatagataacattaattaattttattgaaaaagataagagtaattgagaaatggtataagtgacaaat 4122778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 14094280 - 14094326
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||    
T  14094280 ttaaataggaacgaaaaattcaccctaaaaaaactcttaaaaaggaa 14094326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8460988 - 8460935
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttg-tttaaaacaacaaac 54  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||| |||||||    
T  8460988 ttttgtttaaattttaagataacaagaaacaaactttgttttaaaaaaacaaac 8460935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6111059 - 6111113
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaac 54  Q
    ||||| ||||| |||||||||||||||||||||| ||||||| |||| |||||||    
T  6111059 attttatttaagtttgaagataacaagaaacaaactttgtttcaaaaaaacaaac 6111113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 9353186 - 9353140
Alignment:
Q  65 caaatatatagcattaattagttttattgaaaaatattagaataatt 111  Q
    |||||| ||||||||||||||||||||||||||| || ||| |||||    
T  9353186 caaatagatagcattaattagttttattgaaaaagataagagtaatt 9353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 6396639 - 6396720
Alignment:
Q  76 cattaattagttttattg-aaaaatattagaataattgacaaagtgtataattgataaatcataccc-tcaaaataccaaaa 155  Q
    |||||||||||||||||| ||||| || ||||||||| | |||| |||||||||| || || ||||| | ||||||||||||    
T  6396639 cattaattagttttattgaaaaaagataagaataattaagaaagggtataattgacaactcttacccttaaaaataccaaaa 6396720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 17193199 - 17193138
Alignment:
Q  158 acatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||| ||| |||   || |||  |||||||||||||||||||||||||||    
T  17193199 acatttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 17193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 21526938 - 21526905
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||||||||||||||||||||||||||    
T  21526938 ctaaaacgacacttaaaaaggaacggagggagta 21526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 8049963 - 8049995
Alignment:
Q  187 taaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||| |||||||||||||||||||||    
T  8049963 taaaaagacacataaaaaggaacggagggagta 8049995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 8460902 - 8460870
Alignment:
Q  55 tttagtttttcaaatatatagcattaattagtt 87  Q
    |||||||||||||||||||| ||||||||||||    
T  8460902 tttagtttttcaaatatatatcattaattagtt 8460870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 23777302 - 23777274
Alignment:
Q  193 gacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||||||||||||||||||||    
T  23777302 gacacttaaaaaggaacggagggagtact 23777274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 27313541 - 27313477
Alignment:
Q  158 acatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtacta 222  Q
    |||||||||||||||| ||| |||   || ||| |||||||||||||  ||||||||||||||||    
T  27313541 acatttaaataggaacaaaaaatttctccaaaagagacacttaaaaaaaaacggagggagtacta 27313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4962888 - 4963110
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt------aaaacaa-caaactttagtttttcaaatatatagcattaattagttttattg 93  Q
    |||||||||||||||||||||||||| |||||||||||||||      ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4962888 attttgtttaaatttgaagataacaataaacaaattttgttttaaaacaaaacaaacaaactttagtttttcaaatatatagcactaattagttttattg 4962987  T
Q  94 aaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaag 193  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||||| |    
T  4962988 aaaaatataagaataattgacaaaaggtataattgataaatcatacccttaaaataccaaaacgacagttaaataggaacaaaaaattcaccctaaaacg 4963087  T
Q  194 acacttaaaaaggaacggaggga 216  Q
    |||||||||||||||||||||||    
T  4963088 acacttaaaaaggaacggaggga 4963110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35793066 - 35793287
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaa---acaacaaactttagtttttcaaatatatagcattaattagttttattgaaaa 97  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||   | || |||| |||||||| |||||| | | ||||||||||||||||||||||    
T  35793066 attttgtttaaatttgaagataacaagaaacaaactttgttttaagaaaaaaaaaacattagttttccaaatagacaacattaattagttttattgaaaa 35793165  T
Q  98 atattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacac 197  Q
    | || ||| |||||||||||| |||||||||| |||||| ||||| ||||||||||||  ||| |||||||||| | ||| |||||||||||||||||||    
T  35793166 agataagagtaattgacaaagggtataattgacaaatcacacccttaaaataccaaaaagacagttaaataggagctaaaaattcaccctaaaaagacac 35793265  T
Q  198 ttaaaaaggaacggagggagta 219  Q
    ||||||| ||||||||||||||    
T  35793266 ttaaaaaagaacggagggagta 35793287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 204
Target Start/End: Original strand, 39430587 - 39430763
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  39430587 aaacaaactttgtttaataaaacaaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaagagtataatt 39430686  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaa 204  Q
    |  ||||| |||||| ||||||||||||  ||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  39430687 gtcaaatcttacccttaaaataccaaaatgacagttaaataggaacgaaaaattcaccttaaaacgacacttaaaaa 39430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4567443 - 4567226
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||  || ||||||||||||| ||| || ||||||||||||||||||||||||||| |    
T  4567443 attttgtttaaatttgaagataagaagaaacaaactttgtttaaagaaa-aaactttagttttccaactagatagcattaattagttttattgaaaaaga 4567345  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | | | || ||||||||| ||||||| || ||||| || ||| ||||||||||||  ||| |||| ||||||||| | ||||||| ||||||||||||||    
T  4567344 taaaagtagttgacaaagggtataatcgacaaatcgtaaccttaaaataccaaaaagacagttaattaggaacgacaaattcaccataaaaagacactta 4567245  T
Q  201 aaaaggaacggagggagta 219  Q
    |||||||||||||||||||    
T  4567244 aaaaggaacggagggagta 4567226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25290755 - 25290538
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt------aaaacaa-caaactttagtttttcaaatatatagcattaattagttttattg 93  Q
    ||||||||||||||||| ||||||| ||||||||||||||||      ||||||| |||||||||||||||||||||||   ||||||||||||||||||    
T  25290755 attttgtttaaatttgatgataacaggaaacaaattttgttttaaaataaaacaaacaaactttagtttttcaaatatacgacattaattagttttattg 25290656  T
Q  94 aaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaag 193  Q
    |||||||| |||||||||||||||   |||||||||||||||||| ||| ||||||||| ||  ||| | |||||| |||| || |||||||||||||||    
T  25290655 aaaaatataagaataattgacaaaagatataattgataaatcataaccttaaaataccataatgacagtaaaatagaaacggaaaattcaccctaaaaag 25290556  T
Q  194 acacttaaaaaggaacgg 211  Q
    |||||||||||| |||||    
T  25290555 acacttaaaaagaaacgg 25290538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 15643437 - 15643245
Alignment:
Q  28 aaacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| |||||||||||  || ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| |||| |||||||    
T  15643437 aaacaaactttgtttaaaaataaaaaactttagttttccaaatatatagcattaattagttttattgaaaaaaataagagtaattgataaagggtataat 15643338  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||||| |||||| ||||||||||||| ||| |||||||| ||||||| ||||| |||||||| |||||||||| | |||||||||||||    
T  15643337 tgagaaatcgtacccttaaaataccaaaacgacagttaaatagaaacgaaaaattcatcctaaaaaaacacttaaaaggaaacggagggagta 15643245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 24394211 - 24394401
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||| ||||| ||||||||||| |||||||| ||| || ||||||||| ||||||||    
T  24394211 aaacaaactttgtttaaaaatacaaactttagttttccaaatatatatcattagttagttttattcaaaaatataagagtagttgacaaagggtataatt 24394310  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||| |||||| ||| ||||||||  | | ||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  24394311 gataaatcgtacccttaaagtaccaaaatgatagttaaataggaacgaaaagttcaccctaaaaa-acacttaaaaaggaaccgagggagta 24394401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 37124299 - 37124091
Alignment:
Q  6 gtttaaatttgaagataacaagaaacaaattttgttt-aaaacaaca-aactttagtttttcaaatatatagcattaattagttttattgaaaaatatta 103  Q
    |||||||| |||||||||||||||| || |||||||| |||| || | |||||||||||| |||||| | ||||||||||||||||||||||||| || |    
T  37124299 gtttaaatgtgaagataacaagaaataatttttgtttgaaaataaaacaactttagttttccaaatagagagcattaattagttttattgaaaaagataa 37124200  T
Q  104 gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaa 203  Q
    || ||||| |||||| |||||||||| ||||  |||||| ||||||||||||  | | ||||| |||||||||| |||||| ||||||||||||||||||    
T  37124199 gagtaatttacaaagggtataattgacaaattgtacccttaaaataccaaaaagaaagttaaaaaggaacgaaaaattcacactaaaaagacacttaaaa 37124100  T
Q  204 aggaacgga 212  Q
    |||||||||    
T  37124099 aggaacgga 37124091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 10534967 - 10535185
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||| ||||||||||||||||||||||||||| | ||||| ||| || |||||||| ||||||||||| ||  ||||||||||||||||||||||| |    
T  10534967 attttggttaaatttgaagataacaagaaacaaactatgttttaaaaaaaaaactttaatttttcaaatagattacattaattagttttattgaaaaaga 10535066  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | |||  ||||||||||  |||||||||| ||||  ||  || ||||||||||||  ||| |||||||||||||||| | ||||| || |||||||||||    
T  10535067 taagaggaattgacaaaaggtataattgacaaattgtattcttaaaataccaaaaagacagttaaataggaacgaaaaaatcaccatataaagacactta 10535166  T
Q  201 aaaaggaacggagggagta 219  Q
    |||| ||||| ||||||||    
T  10535167 aaaacgaacgaagggagta 10535185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 14771449 - 14771585
Alignment:
Q  82 ttagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatatt 181  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||| |||    
T  14771449 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcatacccttaaaataccaaaacgacagttaaataggaacgaaaaatt 14771548  T
Q  182 caccctaaaaagacacttaaaaaggaacggagggagt 218  Q
    ||||||||||| ||||||||||| |||| ||||||||    
T  14771549 caccctaaaaaaacacttaaaaaagaacagagggagt 14771585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 15221901 - 15222037
Alignment:
Q  82 ttagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatatt 181  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||| |||    
T  15221901 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcatacccttaaaataccaaaacgacagttaaataggaacgaaaaatt 15222000  T
Q  182 caccctaaaaagacacttaaaaaggaacggagggagt 218  Q
    ||||||||||| ||||||||||| |||| ||||||||    
T  15222001 caccctaaaaaaacacttaaaaaagaacagagggagt 15222037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 8614788 - 8615007
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaac-tttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||||| ||| || |||||||||||||| |||||     
T  8614788 attttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaaaacatttagtttttcaaatagataacaataattagttttatt-aaaaaa 8614886  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||| |||||||| ||| |||||||||| ||||| |||||  ||||||||||||  ||| ||||||| ||||||   ||||  |||||||| ||||||    
T  8614887 ataagagtaattgac-aagggtataattgaaaaatcgtacccctaaaataccaaaa-gacacttaaatatgaacga---attcctcctaaaaatacactt 8614981  T
Q  200 aaaaaggaacggagggagtactatat 225  Q
    ||||||||||| |||||||| |||||    
T  8614982 aaaaaggaacgaagggagtagtatat 8615007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 3835651 - 3835840
Alignment:
Q  28 aaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| || |||||||||||||| |||||| |||  |||||||||||  ||||||||| || ||| | ||||||| || |||||||    
T  3835651 aaacaaactttgtttaaaaaaaacaaactttagttttccaaatagataatattaattagtt--attgaaaaagataagagtgattgacagagggtataat 3835748  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||||| |||||| ||||||||||||  ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  3835749 tgacaaatcgtacccttaaaataccaaaaagacagttaaataggaacgaaa-attcaacctaaaaagacacttaaaaaggaacggagggagta 3835840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 2798698 - 2798562
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| || ||||||| || |||||    
T  2798698 tttgtttaaaaatacaaactttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaattgacagag-gtataatcgacaaatc 2798600  T
Q  136 ataccctcaaaataccaaaacaacatttaaataggaac 173  Q
    ||||||| ||||||| ||||  ||||||||||||||||    
T  2798599 atacccttaaaatactaaaatgacatttaaataggaac 2798562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 28226667 - 28226458
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgtttaaaacaacaaa-ctttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataa 109  Q
    ||||| |||||||||||||||||| |||||| |||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||  ||    
T  28226667 aattttaagataacaagaaacaaactttgttaaaaataaaaaaactttagtttttcaaatatataacattaattagttttattgaaaaagataagagcaa 28226568  T
Q  110 ttgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaac 209  Q
    ||||||||  |||||||||| ||| | |||||| | ||||||||||| ||  ||||||||||||   | || | | || ||| ||| |||||||||||||    
T  28226567 ttgacaaaaggtataattgacaaagcgtacccttataataccaaaacgacggttaaataggaacactaaatccgcactcaaacgacgcttaaaaaggaac 28226468  T
Q  210 ggagggagta 219  Q
    ||||||||||    
T  28226467 ggagggagta 28226458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 36412806 - 36413012
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataat 110  Q
    ||||| |||||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||| |||||||||||||| |||||||| || ||| ||||    
T  36412806 aatttaaagataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaat 36412903  T
Q  111 tgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacg 210  Q
      |||||| |||||||||||||||  |||||| |||||| |||||  ||  |||||||||||||  | ||||||  | |||  |||||||||||||||||    
T  36412904 aaacaaagggtataattgataaattgtacccttaaaatatcaaaatgacggttaaataggaacgctaaattcacattcaaactacacttaaaaaggaacg 36413003  T
Q  211 gagggagta 219  Q
    ||| |||||    
T  36413004 gagagagta 36413012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 27723388 - 27723203
Alignment:
Q  31 caaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgat 130  Q
    |||| ||||||||| | ||||||||||| ||||||||| | ||||||||||||||||||| ||||||| || | | ||||| |||||| |||||| |||     
T  27723388 caaactttgtttaataaaacaaactttaatttttcaaacagatagcattaattagttttactgaaaaagataaaagtaattaacaaagagtataagtgac 27723289  T
Q  131 aaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggaggga 216  Q
    ||||| ||| || |||||| |||||  | | |||||||||||| ||| |||| ||||||||||||||||||||| ||| |||||||    
T  27723288 aaatcgtacacttaaaatatcaaaaagatagttaaataggaacaaaaaattcgccctaaaaagacacttaaaaatgaatggaggga 27723203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 2273495 - 2273690
Alignment:
Q  25 aagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtata 124  Q
    |||||||||| ||||||| | | |||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||| |||||||||||| |||||    
T  2273495 aagaaacaaactttgtttcataaaacaaactttagttttccaaatatatagcattaataagttttattgaaaaagataagagtaattgacaaagcgtata 2273594  T
Q  125 attgataaatcataccct-caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||| ||||  ||| ||  |||||| |||||| ||  |||||||| ||||| | || | |  | ||| ||||||||||||||||||||| |||||    
T  2273595 attgacaaattgtactctgaaaaatatcaaaacgacggttaaatagaaacgataaatccgcattcaaatgacacttaaaaaggaacggagagagta 2273690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 16196914 - 16196781
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaa-aacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||| || ||| ||| |||||||||||||||||||     
T  16196914 attttgtttaaatttgaagaaaacaagaaacaaactttgtttaataaaaacaaactttagttttccaattagataacatcaattagttttattgaaaaag 16196815  T
Q  100 attagaataattgacaaagtgtataattgataaat 134  Q
    || ||| ||| |||||||| |||||||||| ||||    
T  16196814 ataagagtaa-tgacaaagggtataattgacaaat 16196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 46672039 - 46672209
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| |||||||||||||| | ||||||||||| |||||||| ||||||| |||||||        |||||||||| |||||||||| ||||||||||||    
T  46672039 aaaaaaacaaactttagttctccaaatatatagtattaattaattttatttaaaaata--------attgacaaagggtataattgacaaatcataccct 46672130  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtact 221  Q
     |||||| || ||| ||| |||||||||||| ||| ||| || |||||| ||||||||||| ||||||||  |||||||    
T  46672131 taaaatatcagaacgacaattaaataggaacaaaaaatttacactaaaatgacacttaaaagggaacggaatgagtact 46672209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 39617621 - 39617447
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||||||||||||||| ||||||     ||||||||| ||||||||||||| || | | |||||||||||  |||||| ||| ||||| |||||| ||||    
T  39617621 aacaaactttagttttccaaataa----cattaattaattttattgaaaaagataaaagtaattgacaaaaggtataactgacaaatcgtacccttaaaa 39617526  T
Q  148 taccaaaacaacat-------ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| |||| || |        |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  39617525 tacaaaaaaaaaaaaaaaaagttaaataggaacaaaaaattcaccctaaaaagacacttaaaaaggaacggagggagta 39617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 39599661 - 39599822
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattg-aaaaatattagaataa 109  Q
    ||||| ||||||| || ||||||| ||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| | ||||| || ||| |||    
T  39599661 aattttaagataaaaacaaacaaactttgtttaaaaaaa---actttagtttttcaaatatatagcattaattagttttatcgaaaaaagataagagtaa 39599757  T
Q  110 ttgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacg 174  Q
    |||| |||| ||||||||||  |||  || ||| |||||||||| || |||  ||||||||||||    
T  39599758 ttgataaagggtataattgaacaattgtatccttaaaataccaacacgacagctaaataggaacg 39599822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 4678500 - 4678432
Alignment:
Q  32 aaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4678500 aaattttgtttaaaaaaacatactttagttttccaaatatataacattaattagttttattgaaaaata 4678432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 39432670 - 39432604
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||    
T  39432670 aaactttagtttttcaaatatatagcactaataagttttattgaaaaatataaaaataattgacaaa 39432604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 156
Target Start/End: Original strand, 7809181 - 7809309
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||| ||| || ||||||||||||| | |||| |||| |||||||||||||||| ||||| || | | ||||||| |||  ||||||||    
T  7809181 aaacaaaatttgttttaaaaaataaactttagttttcctaatacatagtattaattagttttatttaaaaagataaaagtaattgagaaatggtataatt 7809280  T
Q  128 gataaatcataccctcaaaataccaaaac 156  Q
    || |||| ||| ||| |||||||||||||    
T  7809281 gacaaataatatccttaaaataccaaaac 7809309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 39247325 - 39247460
Alignment:
Q  77 attaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa-taccaaaacaacatttaaataggaacga 175  Q
    |||||||||||||||||||||| || ||| |||| ||||||| ||| |||||| ||||||||| || |||| ||||||||| ||| |||||||||||||     
T  39247325 attaattagttttattgaaaaa-ataagagtaatggacaaagggtacaattgacaaatcatactcttaaaaataccaaaacgacagttaaataggaacgc 39247423  T
Q  176 aatattcaccctaaaaagacacttaaaaaggaacgga 212  Q
     | |||| | ||| || |||||||||||| |||||||    
T  39247424 taaattcgcactagaacgacacttaaaaatgaacgga 39247460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 2271863 - 2271953
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||||||| | |||||||||||||||| ||||||||| | || ||||||||||||| |||||| ||||||||||||| ||| |||||    
T  2271863 tttgtttaaattttaggataacaagaaacaaactttgtttaata-aataaactttagttttccaaatagatagcattaattaatttaattga 2271953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14771368 - 14771413
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14771368 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 14771413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15221820 - 15221865
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15221820 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 15221865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 44550112 - 44549986
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||| ||||| |||||| ||||| ||  ||||||||||||||| ||||||| || ||| ||||||| |||  ||| || ||| ||||| |||||| ||||    
T  44550112 aacatacttttgtttttaaaatagatgtcattaattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttacccttaaaa 44550013  T
Q  148 taccaaaacaacatttaaataggaacg 174  Q
    ||||||||| ||| ||||||| |||||    
T  44550012 taccaaaacgacagttaaataagaacg 44549986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3835602 - 3835647
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  3835602 attttgtttaaatttgaagataacaagaaacaaactttgtttaaaa 3835647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 41747201 - 41747331
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||| ||||||||||||| ||| ||||||||| || |||||||||| ||| ||||  || ||||||| |||||||  ||||| |||| || ||    
T  41747201 tttgtttaaaaaaacaaactttagtattt-aaatatataacaataattagtttcatt-aaaaggataagaataactgacaaatggtatatttgacaagtc 41747298  T
Q  136 ataccctcaaaataccaaaacaacatttaaata 168  Q
     |||||| ||||||||||| ||| | |||||||    
T  41747299 gtacccttaaaataccaaagcaataattaaata 41747331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 27229608 - 27229675
Alignment:
Q  28 aaacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||| |||||||||||  |||||||||||||||| |||||  |||||||||||||||||||||||    
T  27229608 aaacaaactttgtttaaaaataacaaactttagttttccaaattgatagcattaattagttttattga 27229675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 38707292 - 38707223
Alignment:
Q  144 aaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagg 214  Q
    ||||||||||||| | | |||||||||||||||| |||||||||||||| ||| || ||||||||||||||    
T  38707292 aaaataccaaaacgatagttaaataggaacgaaaaattcaccctaaaaa-acagttgaaaaggaacggagg 38707223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 43368863 - 43368785
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattga 129  Q
    ||||||||||||| |||||||||| | ||||||||||||||| ||||| || | | |||||||||||| |||| |||||    
T  43368863 aaactttagttttccaaatatataactttaattagttttatttaaaaagataaaagtaattgacaaagggtatgattga 43368785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15643490 - 15643449
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  15643490 attttgtttaaatttgaagataacaataaacaaattttgttt 15643449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 2271358 - 2271318
Alignment:
Q  185 cctaaaaagacacttaaaaaggaacggagggagtactatat 225  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  2271358 cctaaaaagacacttaaaaagaaacggagggagtactatat 2271318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 12394204 - 12394023
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataa------ttgacaaagtgtataattgataaatcataccc 141  Q
    |||||||||||||||| |||||| | || ||||||||||||||| |||||| | ||  ||||      | ||||||   ||||||||| ||||| |||||    
T  12394204 aacaaactttagttttccaaatagacagtattaattagttttatcgaaaaaaaataagataagagtgatcgacaaatgatataattgacaaatcttaccc 12394105  T
Q  142 tcaaaa-taccaaaacaacatttaaataggaacgaaatattcaccctaaaaa-gacacttaaaaaggaacggagggagtacta 222  Q
    | |||| ||| | || | || |||||||| |||| || |||||||||||||| ||||||||||||||||||| | ||||||||    
T  12394104 tgaaaaatactataaga-cagttaaatagaaacggaaaattcaccctaaaaaagacacttaaaaaggaacggtgtgagtacta 12394023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 27229804 - 27229899
Alignment:
Q  80 aattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaatacc-aaaacaacatttaaataggaacg 174  Q
    ||||||||||||||||||| || | |||| |||| ||||  ||||| ||| ||||||| || | |||||||| ||||||||| |||||||||||||    
T  27229804 aattagttttattgaaaaagataaaaatagttgagaaagcatataagtgagaaatcatgcctttaaaataccaaaaacaacagttaaataggaacg 27229899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 39427483 - 39427432
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaa-ttagttttattgaaaaa 98  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  39427483 aacaaactttagttttccaaatatatagcattaatttagttttattaaaaaa 39427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 46671971 - 46672010
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  46671971 tttgtttaaatttgaagataacaagaaataaattttgttt 46672010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 10026226 - 10026291
Alignment:
Q  54 ctttagtttttcaaatatatag--cattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    |||||||||||||||||||||   ||||||||||||||||||||||| || ||| ||||| |||||    
T  10026226 ctttagtttttcaaatatatataacattaattagttttattgaaaaagataagagtaattaacaaa 10026291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12394280 - 12394239
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  12394280 attttgtttaaatttgatgataacaagaaacaaactttgttt 12394239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 39426257 - 39426216
Alignment:
Q  179 attcaccctaaaaagacacttaaaaaggaacggagggagtac 220  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  39426257 attcaccttaaaatgacacttaaaaaggaacggagggagtac 39426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 24394160 - 24394199
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  24394160 tttgtttaaatatgaagataacaagaaataaattttgttt 24394199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 39430831 - 39430784
Alignment:
Q  155 acaacatttaaataggaacgaaatattcaccctaaaaagacacttaaa 202  Q
    |||||| ||||||| |||||||| ||||||||||||| ||||||||||    
T  39430831 acaacagttaaataagaacgaaaaattcaccctaaaatgacacttaaa 39430784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 10534442 - 10534401
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactatattt 227  Q
    ||||||||||| |||||||||||||||| || ||||||||||    
T  10534442 ctaaaaagacatttaaaaaggaacggagagaatactatattt 10534401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 16197453 - 16197486
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||||| ||||||||||    
T  16197453 ctaaaaagacacttaaaaaggaatggagggagta 16197486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 25291075 - 25291108
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||||||||||||||||||||||||||    
T  25291075 ctaaaacgacacttaaaaaggaacggagggagta 25291108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27723444 - 27723404
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  27723444 attttgtttaaatttgaa-ataacaaggaacaaattttgttt 27723404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 39434553 - 39434586
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||||||||||||||||||||||||||    
T  39434553 ctaaaacgacacttaaaaaggaacggagggagta 39434586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 46671651 - 46671618
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||||||||||||||||||||||||||    
T  46671651 ctaaaacgacacttaaaaaggaacggagggagta 46671618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 1719906 - 1720038
Alignment:
Q  77 attaattagttttattgaaaaatatta-gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacga 175  Q
    |||||| ||||||||||||||| | || |||||| ||| |||   |||||||||||||| ||||    ||| || |||||||||| |||||||||||| |    
T  1719906 attaataagttttattgaaaaagagtaagaataactgagaaatgatataattgataaattatacaaataaactatcaaaacaacaattaaataggaacaa 1720005  T
Q  176 aatattcaccctaaaaagacacttaaaaaggaa 208  Q
     ||||||   || ||| || |||||||||||||    
T  1720006 tatattcgtactcaaacgaaacttaaaaaggaa 1720038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 31430565 - 31430537
Alignment:
Q  193 gacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||||||||||||||||||||    
T  31430565 gacacttaaaaaggaacggagggagtact 31430537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 512 - 293
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  512 attttgtttaaatttgaagatgacaagaaacaaattttgttttaaa--acaaactttagtttt-caaatatataacattaattagttttattgaaaatta 416  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | |||||||||||||||| |||| ||||| ||||||||||||  |||||||||||| ||| |||||||| |||||||  |||||||||||||||||||||    
T  415 taagaataattgacaaagggtatgattgaaaaatcataccctttaaataccaaaacgacagttaaatagaaacgaaaatttcaccctaaaaagacactta 316  T
Q  201 aaaaggaacggagggagtactat 223  Q
    |||||||||||||| ||||||||    
T  315 aaaaggaacggaggaagtactat 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 834 - 866
Alignment:
Q  187 taaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||| |||||||||||||||||||||||||||    
T  834 taaaacgacacttaaaaaggaacggagggagta 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 32717936 - 32718157
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaa 97  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32717936 attttgtttaaatttgaagataacaagaaataaatattgttttaaaacaaaacaaactttagtttttcaaatatatagcattaattagtttaattgaaaa 32718035  T
Q  98 atattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacac 197  Q
    |||| ||||||| |||||||| |||||||||| |||| ||| ||| |||| |||||||| ||| |||||||||||||||| ||||||| || ||||||||    
T  32718036 atataagaataactgacaaagggtataattgacaaattatatccttaaaaaaccaaaacgacagttaaataggaacgaaaaattcaccatagaaagacac 32718135  T
Q  198 ttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||||    
T  32718136 ttaaaaaggaacggagggagta 32718157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16365863 - 16365643
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaa---acaacaaactttagtttttcaaatatatagcattaattagttttattgaaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||||||  |   | |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  16365863 attttgtttaaatttgaagataacaagaaacaaattttgttttgagacaaaacaaactttagtttc-caaatatatagcactaattagttttattgaaaa 16365765  T
Q  98 atattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacac 197  Q
    |||| |||||||||||||||  |||||||||| |||||||||| | |||||| |||||| | | |||||||||||| ||| ||||| ||||||| |||||    
T  16365764 atataagaataattgacaaaaagtataattgacaaatcatacctttaaaatatcaaaacgataattaaataggaacaaaaaattcatcctaaaacgacac 16365665  T
Q  198 ttaaaaaggaacggagggagta 219  Q
    |||||||||||||||| |||||    
T  16365664 ttaaaaaggaacggagagagta 16365643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 12436695 - 12436897
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatta 103  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||  |||| |||||||||||||| |||||||||||||||||||||||||||||| |    
T  12436695 ttgtttaaatttgaagataacaagaaacgaattttgtttaaaaaaa--aactgtagtttttcaaatagatagcattaattagttttattgaaaaatataa 12436792  T
Q  104 gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaa 203  Q
    || |||||||||||| |||||||||||||||  |||| | |||||| |||||  ||  ||||||||||||| || ||| || ||||||||||||||| ||    
T  12436793 gagtaattgacaaagcgtataattgataaattgtaccattaaaatatcaaaaacaccgttaaataggaacgcaaaatttacactaaaaagacacttacaa 12436892  T
Q  204 aggaa 208  Q
    |||||    
T  12436893 aggaa 12436897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1583589 - 1583362
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||||||||| |||||||||||||| ||||||| ||||||| |||| || ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  1583589 attttgtttaagtttgaagataacaaaaaacaaactttgttttaaaaaaaaaaactttagttttccaaatagatagcattaattagttttattgaaaaag 1583490  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccc-tcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
    |  ||| | |||||||||| |||||||||| ||||| ||||| | ||||| |||||| |||| |||||||| ||| ||| | ||||| ||| ||||||||    
T  1583489 acaagagt-attgacaaagagtataattgacaaatcgtacccttaaaaatcccaaaaaaacagttaaatagaaaccaaaaagtcaccataagaagacact 1583391  T
Q  199 taaaaaggaacggagggagtactatattt 227  Q
    ||||||||||||||| ||||| |||||||    
T  1583390 taaaaaggaacggagtgagtaatatattt 1583362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 17558005 - 17557868
Alignment:
Q  82 ttagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatatt 181  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||| |||||| ||| |||||||||||||||| |||    
T  17558005 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcatacccttaaaatatcaaaacgacaattaaataggaacgaaaaatt 17557906  T
Q  182 caccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||||||||||| ||| || ||||||    
T  17557905 caccctaaaaagacacttaaaaagaaacagatggagta 17557868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 19931962 - 19931802
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatta 103  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||| || |    
T  19931962 ttgtctaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttagtttt-caaatatataacatgaattagttttattgaaaaagataa 19931864  T
Q  104 gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaa 165  Q
    ||||||||||||||  |||||| ||| ||||| || ||| ||||||| ||||| || |||||    
T  19931863 gaataattgacaaatagtataactgacaaatcgtagccttaaaatactaaaacgacgtttaa 19931802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 19925013 - 19924863
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatta 103  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||| || |    
T  19925013 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttag-ttttcaaatatataacatgaattagttttattgaaaaagataa 19924915  T
Q  104 gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaac 156  Q
    ||||||||||||||  |||||| | | ||||| |||||| ||||||| |||||    
T  19924914 gaataattgacaaatggtataact-acaaatcgtacccttaaaatactaaaac 19924863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 14655030 - 14654862
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||                 
T  14655030 aaacaaaatttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgac------------- 14654944  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacgga 212  Q
       |||||||||||| ||||||||||| | ||| ||||||| |||||||| ||| || |||||||||||||||||||||||||||    
T  14654943 ---aaatcatacccttaaaataccaaagcgacaattaaataagaacgaaaaattgacgctaaaaagacacttaaaaaggaacgga 14654862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 17201369 - 17201140
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaac-------------aaactttagtttttcaaatatatagcattaattagtt 87  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||              ||||||||||||| |||||| ||||||||||||||||    
T  17201369 attttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaaactttgtttagaaaaaactttagttttccaaatagatagcattaattagtt 17201270  T
Q  88 ttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccct 187  Q
    ||||||||||| || ||| |||||||||||   ||||||||| |||||||||||| ||||||  ||||  ||| |||||||||||||||| | ||| |||    
T  17201269 ttattgaaaaagataagagtaattgacaaatgatataattgacaaatcatacccttaaaatataaaaaagacagttaaataggaacgaaa-aatcatcct 17201171  T
Q  188 aaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||| | ||||||| |||||||||    
T  17201170 aaaaagacactt-agaaggaaccgagggagta 17201140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 17202832 - 17203002
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||| ||| || | | |||||||||||| |||||||||| |||||||||||| ||||    
T  17202832 aacaaactttagttttccaaatagataacattaattagttttattgataaagataaaagtaattgacaaagggtataattgaaaaatcatacccttaaaa 17202931  T
Q  148 taccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||||  ||| ||||||||||| |||| | || | ||||||| ||||||||||||||||||||||||||    
T  17202932 tacaaaaaagacagttaaataggaatgaaa-aatccctctaaaaaaacacttaaaaaggaacggagggagta 17203002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 11992195 - 11992387
Alignment:
Q  25 aagaaacaaattttgtttaaaacaa----caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtg 120  Q
    |||||||||| ||||||||||| ||    |||||||||||||| |||||| ||||||||||||| ||||| ||||||| || | | ||||||||| | ||    
T  11992195 aagaaacaaactttgtttaaaaaaaaaaacaaactttagttttccaaataaatagcattaattaattttactgaaaaagataaaagtaattgacagattg 11992294  T
Q  121 tataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggag 213  Q
    ||||||||| ||||| |||| | ||||||||||||  | | ||||||||||||  || ||||| |||||||||||||||||||||||||||||    
T  11992295 tataattgacaaatcgtacctttaaaataccaaaaagaaagttaaataggaacagaaaattcatcctaaaaagacacttaaaaaggaacggag 11992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 18413324 - 18413527
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| || ||||| ||||||| ||||||  |||||||||||| ||| ||||||||| |    
T  18413324 attttgtttaaatttgaagataacaagaaacaaactgtgtttaaaaaaataaactgtagttttccaaatagctagcattaattaattt-attgaaaaaga 18413422  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    |              ||| ||||||||||||||| ||||||| ||||||||||||  ||| |||||||||||||||| | | ||||||||||||||||||    
T  18413423 t--------------aagggtataattgataaattatacccttaaaataccaaaaagacagttaaataggaacgaaaaaataaccctaaaaagacactta 18413508  T
Q  201 aaaaggaacggagggagta 219  Q
    ||| ||||| |||||||||    
T  18413509 aaagggaactgagggagta 18413527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 20201739 - 20201544
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaat----aattgacaaagtgtat 123  Q
    ||||||| ||| ||||||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||| | | |    ||||||||||| ||||    
T  20201739 aaacaaactttctttaaaaaaataaactttagttttccaaatatataacattaattagttttattgaaaaatataaaagtaagaaattgacaaagggtat 20201640  T
Q  124 aattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||| ||||||| ||||||||| ||  ||| ||||||| ||||||||  | || ||||||| ||||||||||||| ||| |||||||||    
T  20201639 aattgacaaattatacccttaaaataccagaaagacagttaaataagaacgaaaagtccatcctaaaacgacacttaaaaagaaacagagggagta 20201544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 8544693 - 8544906
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||    ||| | ||||||| |||||| ||| | ||||||||||||||||||||| |    
T  8544693 attttgtttgaatttgaagataacaagaaacaaactttgtttaaaa----aaaatgtagttttccaaataaataacgttaattagttttattgaaaaaga 8544788  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | ||| ||||||||| |   ||||||||| ||||| |||| | ||||||||||||   || |||||||||||||||| |||||  | |||||||||||||    
T  8544789 taagagtaattgacagatgatataattgacaaatcgtaccattaaaataccaaaa-ggcaattaaataggaacgaaaaattcattcaaaaaagacactta 8544887  T
Q  201 aaaaggaacggagggagta 219  Q
    |||| ||||  ||||||||    
T  8544888 aaaaagaacaaagggagta 8544906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 19922263 - 19922151
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatta 103  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||| || |    
T  19922263 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttag-ttttcaaatatataacatgaattagttttattgaaaaagataa 19922165  T
Q  104 gaataattgacaaa 117  Q
    |||||| |||||||    
T  19922164 gaataactgacaaa 19922151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 39614968 - 39614797
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa------caaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||      ||||||||| |||||||||||||||||||||||||||||| ||||    
T  39614968 attttgtttaaatttgaagataataagaaacaaactttgtttaaaaaaaaacaaacaaactttaatttttcaaatatatagcattaattagttttgttga 39614869  T
Q  95 aaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaa 166  Q
    |||| || ||| ||||| ||||||  ||||||||| ||||| || | | ||||||||||||| ||| |||||    
T  39614868 aaaagataagagtaattaacaaaggatataattgacaaatcgtatctttaaaataccaaaacgacagttaaa 39614797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 36437304 - 36437515
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaatt-agttttattgaaaaat 99  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| | ||  ||||||    || |||| | |||||||||||| |||||||||||||||     
T  36437304 attttgtttaaatttgaagataatgagaaacaaactttgtttaataaaa--aactttg---ttccaaagagatagcattaatttagttttattgaaaaag 36437398  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||| ||||||| ||||  ||||||||| ||||| ||| || ||||||||||||  ||| |||||||| ||||||| ||||| || ||||||||||||    
T  36437399 ataagagtaattgataaaggatataattgaaaaatcgtacgcttaaaataccaaaaagacagttaaatagtaacgaaaaattcatccaaaaaagacactt 36437498  T
Q  200 aaaaaggaacggaggga 216  Q
    |||||| ||||||||||    
T  36437499 aaaaagaaacggaggga 36437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 43346630 - 43346857
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| || |||||||||||||  ||||||||||||||| ||||||||||| ||||| |    
T  43346630 attttgtttaaatttgtagataacaagaaacaaattttatttaaaa-aaaaaactttagttttctaaatatatagcattacttagttttattaaaaaaga 43346728  T
Q  101 ttagaataa-ttgacaaagtgta---------taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaa 190  Q
    | ||| |||    |||||| | |         ||||||| ||||| ||| || ||||||| ||||| | |||||||||||||| ||| |||||| |||||    
T  43346729 taagagtaaccaaacaaagagaaagatacgagtaattgacaaatcgtactcttaaaatactaaaacgagatttaaataggaacaaaaaattcactctaaa 43346828  T
Q  191 aagacacttaaaaaggaacggagggagta 219  Q
    | ||||||||||||||||||||| |||||    
T  43346829 acgacacttaaaaaggaacggagagagta 43346857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 28620034 - 28619899
Alignment:
Q  86 ttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatt--taaataggaacgaaatattca 183  Q
    ||||||||||||| || ||| |||||||||||| || ||||||| ||||| |||||| |||||||||||| || | |  ||||||||||||||| |||||    
T  28620034 ttttattgaaaaagataagagtaattgacaaagggtgtaattgacaaatcgtacccttaaaataccaaaaaaaaactgttaaataggaacgaaaaattca 28619935  T
Q  184 ccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||| || |||||||||||    
T  28619934 ccctaaaaagacacttaaaaaagaccggagggagta 28619899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 32474282 - 32474131
Alignment:
Q  25 aagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtata 124  Q
    |||||| ||| ||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||| | | || ||||||| |||| |||||    
T  32474282 aagaaaaaaactttgtttaaaaaaacaaactttaattttccaaatagatagcattaattagttttattgaaaaaaaat-gagtaattgataaagggtata 32474184  T
Q  125 attgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaa 177  Q
    ||||  ||||| |||||| ||||||| ||||  ||| ||||||||||||||||    
T  32474183 attggcaaatcgtacccttaaaatacaaaaaagacagttaaataggaacgaaa 32474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 36060245 - 36060373
Alignment:
Q  98 atattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacac 197  Q
    |||| ||| |||||||||||| ||||||| || ||||| ||| || ||||||||||||| ||| |||||||||||||||| ||||||| ||||| |||||    
T  36060245 atataagagtaattgacaaagggtataatcgacaaatcgtacacttaaaataccaaaacgacagttaaataggaacgaaaaattcaccttaaaacgacac 36060344  T
Q  198 ttaaaaaggaacggagggagtactatatt 226  Q
    ||||||||||||||||| |||| ||||||    
T  36060345 ttaaaaaggaacggaggaagtattatatt 36060373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 249631 - 249743
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||| |||||||||| |||||||| ||| ||||||| ||||  ||| |||||||||||| ||| ||||| ||||||| ||||||||||||||    
T  249631 taattgacaaagggtataattgacaaatcatatccttaaaatactaaaatgacagttaaataggaacaaaaaattcatcctaaaacgacacttaaaaagg 249730  T
Q  207 aacggagggagta 219  Q
    ||||||| |||||    
T  249731 aacggagagagta 249743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 42674035 - 42674260
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt---aaaacaacaaactttagtttttcaaatatatagcattaattag--------tttt 89  Q
    ||||| |||||||||||||||||||||||||||| |||||||   |||| || ||||||||||||| |||||| ||| ||| ||||||        ||||    
T  42674035 attttatttaaatttgaagataacaagaaacaaactttgttttaaaaaaaaaaaaactttagttttccaaatagataacatcaattagtttttttttttt 42674134  T
Q  90 attgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaa 189  Q
     ||   ||| || ||| |||||||||||| |||| ||||| ||||  |||||| ||||||||||||  ||| |||||||| ||| ||| ||||||| |||    
T  42674135 ttttttaaagataagagtaattgacaaagggtatcattgacaaattgtacccttaaaataccaaaaagacagttaaatagaaacaaaaaattcaccttaa 42674234  T
Q  190 aaagacacttaaaaaggaacggaggg 215  Q
    ||| | |||||||||| |||||||||    
T  42674235 aaatatacttaaaaagaaacggaggg 42674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 19803708 - 19803578
Alignment:
Q  81 attagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatat 180  Q
    |||||||||||||||||| || | | |||||||||||| |||||||||| ||||| |||||| ||||||||||||  ||| |||||||| ||||||| ||    
T  19803708 attagttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtacccttaaaataccaaaa-gacagttaaatagaaacgaaaaat 19803610  T
Q  181 tcaccctaaaaagacacttaaaaaggaacggag 213  Q
      ||||| |||||||||||||||| ||||||||    
T  19803609 ataccct-aaaagacacttaaaaaagaacggag 19803578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 1590232 - 1590163
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  1590232 aacaaactttagtttttcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaa 1590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 37269472 - 37269360
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||| ||||||||||| |||| || ||| |||||| |||||| ||| |||||||||||| ||| |||||| ||||||  |||||||||||||    
T  37269472 taattgacaaagggtataattgatcaatcgtatccttaaaatatcaaaacgacagttaaataggaacaaaaaattcactctaaaacaacacttaaaaagg 37269373  T
Q  207 aacggagggagta 219  Q
    || |||| |||||    
T  37269372 aatggagagagta 37269360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6428367 - 6428276
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttta-aaacaacaaactttagtttttcaaatatatagcattaattagttttat 91  Q
    |||||||| |||||| |||||||||| ||||||| |||||||  ||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  6428367 attttgttaaaatttaaagataacaacaaacaaactttgtttttaaaaaacaaactttaatttttcaaatagatagcattaattagttttat 6428276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 36246269 - 36246389
Alignment:
Q  29 aacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    |||||||||||| |||||  |||||||||||||||| |||| | |||| ||| |||||||||||||||||| || ||| ||||||| |||| |||||| |    
T  36246269 aacaaattttgtataaaaataacaaactttagttttccaaacagatagtattcattagttttattgaaaaagataagagtaattgagaaagggtataagt 36246368  T
Q  128 gataaatcataccctcaaaat 148  Q
    || ||||| |||||| |||||    
T  36246369 gacaaatcgtacccttaaaat 36246389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 11825533 - 11825630
Alignment:
Q  122 ataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||| ||||| |||||| ||||||| ||||| ||| ||||||| |||| ||| ||||||||| ||| |||| |||||||||||||||| |||||    
T  11825533 ataattgacaaatcgtacccttaaaatacgaaaacgacagttaaataagaacaaaaaattcacccttaaacgacaattaaaaaggaacggagagagta 11825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 39940311 - 39940399
Alignment:
Q  47 caacaaactttagtttttcaaatatatagcattaattagttttatt-gaaaaatattagaataattgacaaagtgtataattgataaat 134  Q
    ||||||| ||||||| | |||||| |||||||||||||||||||||  |||||||| ||| | |||||||||  |||||||||||||||    
T  39940311 caacaaaatttagttatccaaatagatagcattaattagttttattaaaaaaatataagagttattgacaaaaggtataattgataaat 39940399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 249549 - 249596
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  249549 aaactttagttttccaaatatatagcattaattagttttattaaaaaa 249596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 6434031 - 6434122
Alignment:
Q  7 tttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||| | ||||||| ||| ||| ||| ||||||| ||||||||| | ||||||||||| |||  ||||||||| ||||||||||||    
T  6434031 tttaaatttgcaaataacaaaaaataaactttatttaaaaaaacaaacttaaatttttcaaatagataatattaattagatttattgaaaaa 6434122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17202347 - 17202398
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaa 52  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  17202347 attttgtttaaatttgaagataacaagaaaccaactttgtttaaaaaaacaa 17202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 31889466 - 31889580
Alignment:
Q  56 ttagtttttcaaatatatagcattaattagttttattgaaaaat--attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaa 153  Q
    |||||||||| |||||||| |||| |||||||||||||||||||  || | |||||||   ||| |||||||||||| ||||||| | | |||||| |||    
T  31889466 ttagtttttcgaatatatatcatttattagttttattgaaaaataaataataataattagaaaaatgtataattgattaatcataactttaaaatatcaa 31889565  T
Q  154 aacaacatttaaata 168  Q
    | ||||| |||||||    
T  31889566 atcaacaattaaata 31889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 37269576 - 37269522
Alignment:
Q  38 tgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttatt 92  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||    
T  37269576 tgtttaaaaaaacaaattttagttttccaaatatatatcattaattagttttatt 37269522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20201792 - 20201743
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa-ttttgtttaaaacaa 49  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  20201792 attttgtttaaatttgaagataacaagaaacaaagtttggtttaaaacaa 20201743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19133422 - 19133476
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgttt--aaaacaacaaactt 56  Q
    ||||||||||||||||| |||||||||||||||||||||  |||| |||||||||    
T  19133422 ttgtttaaatttgaagacaacaagaaacaaattttgttttaaaaaaaacaaactt 19133476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 17591728 - 17591635
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||||||||||||||| |||||  ||| ||||| ||||||||||||||||| || ||| ||||| | |||  |||||| ||| ||||||||||||    
T  17591728 aacaaactttagttttccaaattgataacatta-ttagttttattgaaaaagataagagtaattaagaaatggtataaatgacaaatcataccct 17591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 28620647 - 28620680
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||||||||||||||||    
T  28620647 ctaaaaagacacttaaaaaggaacggagggagta 28620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 39585777 - 39585881
Alignment:
Q  66 aaatatatagcattaattagttttattga--aaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacattt 163  Q
    ||||| |||||||||||||||||||||||  |||| || |||| |||||||||||  | |||| || ||||| || ||| |||||||||||| |||  ||    
T  39585777 aaatagatagcattaattagttttattgaataaaagataagaacaattgacaaaggatgtaatcgacaaatcgtatccttaaaataccaaaaaaacggtt 39585876  T
Q  164 aaata 168  Q
    |||||    
T  39585877 aaata 39585881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 14655082 - 14655042
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  14655082 ttttttttcaatttgaagataacaagaaacaaattttgttt 14655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 249478 - 249520
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||   ||||||||||||||||||||||||||||||    
T  249478 attttgtttaaat---aagataacaagaaacaaattttgtttaaaa 249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 18552493 - 18552560
Alignment:
Q  29 aacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaa 95  Q
    ||||||||||||||||||  ||  ||||||||||||  ||||| ||| ||||||||||||||||||||    
T  18552493 aacaaattttgtttaaaaataatgaactttagttttctaaatagatatcattaattagttttattgaa 18552560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 4175711 - 4175741
Alignment:
Q  193 gacacttaaaaaggaacggagggagtactat 223  Q
    |||||||||||||||||||||||||||||||    
T  4175711 gacacttaaaaaggaacggagggagtactat 4175741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 10704459 - 10704409
Alignment:
Q  119 tgtataattgataaatcataccctcaaaataccaaaacaacatttaaatag 169  Q
    ||||| ||||| |||||||||||| ||| ||||||||||||| ||||||||    
T  10704459 tgtatcattgacaaatcatacccttaaactaccaaaacaacagttaaatag 10704409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 36060204 - 36060249
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatata 74  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  36060204 aaacaaattttgtttaaaa-aacaaactttagttttctaaatatata 36060249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 37269626 - 37269588
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  37269626 ttgtttaaatctgaagataacaggaaacaaattttgttt 37269588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 39584903 - 39584793
Alignment:
Q  50 caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaata 149  Q
    |||||||||||||| |||||| |||  ||||||| ||||||| |||||| || ||||||| | | |||| || ||||||| |||| ||| | | ||||||    
T  39584903 caaactttagttttccaaatacataagattaattggttttatcgaaaaagataagaataactaagaaagagtttaattgacaaattatatctttaaaata 39584804  T
Q  150 ccaaaacaaca 160  Q
     ||||| ||||    
T  39584803 acaaaataaca 39584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11992147 - 11992188
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||| ||||||||||||| ||| |||||||    
T  11992147 attttgtttaaatttggagataacaagaaataaactttgttt 11992188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 19831766 - 19831799
Alignment:
Q  188 aaaaagacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||||||||||||| |||||||||||    
T  19831766 aaaaagacacttaaaaaggaacagagggagtact 19831799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32474327 - 32474294
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  32474327 attttatttaaatttgaagataacaagaaacaaa 32474294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 9127581 - 9127609
Alignment:
Q  192 agacacttaaaaaggaacggagggagtac 220  Q
    |||||||||||||||||||||||||||||    
T  9127581 agacacttaaaaaggaacggagggagtac 9127609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 11825447 - 11825487
Alignment:
Q  58 agtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||| |||||||| | |||||||||||||||||||||||    
T  11825447 agttttccaaatatacaacattaattagttttattgaaaaa 11825487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 20202288 - 20202320
Alignment:
Q  187 taaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||| |||||||||||||||||||||||||||    
T  20202288 taaaacgacacttaaaaaggaacggagggagta 20202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 36194021 - 36194105
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    |||| ||| ||||||| ||||||||||| ||| ||||||||||||| ||| ||||| || ||| || |||| |||  ||||||||    
T  36194021 aaaataacgaactttaatttttcaaatagataacattaattagtttgattcaaaaagataagagtacttgaaaaatggtataatt 36194105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Complemental strand, 39585371 - 39585343
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagg 214  Q
    |||||||||||||||||||||||||||||    
T  39585371 ctaaaaagacacttaaaaaggaacggagg 39585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 25841918 - 25842109
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||    
T  25841918 aaacaaactttgtttaaaaaaacaaattttagttttccaaatatatagcattaattagttttattgaaaaatataagattaattgacaaagggtatgatt 25842017  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || |||||||||||| |||||||| |||| |||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  25842018 gacaaatcatacccttaaaataccgaaacgacagataaataggaacgaaaaattcaccctaaaacgacacttaaaaaggaacggagggagta 25842109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 45646732 - 45646513
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaac----tttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||| |||||||    |||||||||||||||| |||||||||||||||||||||||||    
T  45646732 attttgtttaaatttgcagataacaggaaacaaactttgtttaaaaaaacaaacaaactttagtttttcaaatagatagcattaattagttttattgaaa 45646633  T
Q  97 aatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
    || |  | | |||||||||||| |||||||||| ||||| |||| | ||||||||||||  ||| ||||||||||||||||  ||||| |||||||||||    
T  45646632 aagaaaaaagtaattgacaaagggtataattgacaaatcgtacctttaaaataccaaaaagacagttaaataggaacgaaaatttcactctaaaaagaca 45646533  T
Q  197 cttaaaaaggaacggaggga 216  Q
    ||||||||||||||||||||    
T  45646532 cttaaaaaggaacggaggga 45646513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 20841446 - 20841225
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||| |    
T  20841446 attttgtttaaatttaaagataataagaaacaaactttgtttaaaaaaa-atactttagtttttcaaatagatagcattaattagttttattgaaaaaaa 20841348  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | ||  |||||||||||  |||||||||| ||||| |||||| ||||||||||||  ||| ||||||| |||| |||  |||||||||||| ||||||||    
T  20841347 taag--taattgacaaatggtataattgacaaatcgtacccttaaaataccaaaaagacagttaaataagaaccaaaatttcaccctaaaatgacactta 20841250  T
Q  201 aaaaggaacggagggagtactatat 225  Q
    ||||||||||||||||||| |||||    
T  20841249 aaaaggaacggagggagtaatatat 20841225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 34668811 - 34668592
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaa-aacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||||||||||| |||||| ||||||||||||||||||||| |||||     
T  34668811 attttgtttaaatttaaagataacaaaaaacaaattttgtttaagaaaaacatactttagttttccaaatagatagcattaattagttttattcaaaaaa 34668712  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    |  | | |||||||||||| |||||||||| ||||| ||| || ||||||| ||||  ||| ||||||||||||||||  ||||||||||||||||||||    
T  34668711 aaaaaagtaattgacaaagggtataattgacaaatcgtacacttaaaatactaaaaagacagttaaataggaacgaaaatttcaccctaaaaagacactt 34668612  T
Q  200 aaaaaggaacggagggagta 219  Q
    ||||||||||| ||||||||    
T  34668611 aaaaaggaacgaagggagta 34668592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 21959700 - 21959857
Alignment:
Q  61 ttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaaca 160  Q
    |||| ||||||||| || |||||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  21959700 ttttaaaatatataacactaattagttttaatgaaaa-tataagaataattgacaaagggtataattgataaatcatacccttaaaataccaaaacgaca 21959798  T
Q  161 tttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  21959799 gttaaataggaacaaaatattcaccctaaaacgacacttaaaaagaaacggagggagta 21959857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5493686 - 5493461
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-----aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaa 95  Q
    ||||||||||||||||||||||| |||||||||| |||||||     |||| || |||  ||||||||||||||| | | ||||||||||||||||||||    
T  5493686 attttgtttaaatttgaagataataagaaacaaactttgtttttaaaaaaaaaaaaaaaattagtttttcaaatagacaacattaattagttttattgaa 5493587  T
Q  96 aaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagac 195  Q
    ||| || ||| |||||||||||| |||||||||| ||||| |||||| ||||||||||||  ||| |||||||||||||||| | | ||| |||||| ||    
T  5493586 aaagataagagtaattgacaaagggtataattgacaaatcgtacccttaaaataccaaaaagacagttaaataggaacgaaaaaataaccttaaaaaaac 5493487  T
Q  196 acttaaaaaggaacggagggagtact 221  Q
    |||||||||| ||| || ||||||||    
T  5493486 acttaaaaagaaacagaaggagtact 5493461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 45759957 - 45760128
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||||||| ||||    
T  45759957 aacaaacattagtttttcaaatagatagcattaattagttttattgagaaagataagagtaattgacaaagggtataattgacaaatgatacccttaaaa 45760056  T
Q  148 taccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
       | |||  ||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  45760057 acactaaaagacagttaaataggaacgaaaaatttaccataaaaagacacttaaaaaggaacggagggagta 45760128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 2093914 - 2093701
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt----------aaaacaacaaactttagtttttcaaatatatagcattaattagtttta 90  Q
    |||| ||||||||||||||||||||||||||||| |||||||          |||| || |||||||||||||||||||| ||||||||||||| ||| |    
T  2093914 atttagtttaaatttgaagataacaagaaacaaactttgtttttaaaaaaaaaaaaaaaaaaactttagtttttcaaatagatagcattaattaatttga 2093815  T
Q  91 ttgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaa 190  Q
     ||||||| || | | |||||||||||| |||||||||| |||||||||||| |||||| |||||  ||| |||||||||||| ||| ||| ||||||||    
T  2093814 ctgaaaaagataaaagtaattgacaaagggtataattgacaaatcatacccttaaaatatcaaaaagacagttaaataggaacaaaaaatttaccctaaa 2093715  T
Q  191 aagacacttaaaaa 204  Q
    |||||| |||||||    
T  2093714 aagacatttaaaaa 2093701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 37030929 - 37031141
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  || |||||   || || |||||| |||||||||||||||||||||||||||      
T  37030929 attttgtttaaatttgaagataacaagaaacaaactttgtttaaa--aaaaaact---gtgttccaaatagatagcattaattagttttattgaaaaagc 37031023  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | | | |||||| ||||| |||||||||| ||||| ||   | ||||||||||||  ||| | ||||||||||| || ||||||| ||||||||||||||    
T  37031024 taaaagtaattggcaaagggtataattgacaaatcgta-atttaaaataccaaaaagacagtaaaataggaacggaaaattcaccataaaaagacactta 37031122  T
Q  201 aaaaggaacggagggagta 219  Q
    |||| ||||||||| ||||    
T  37031123 aaaatgaacggaggaagta 37031141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 27817518 - 27817328
Alignment:
Q  28 aaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| | || ||| |||||||||||||||||| || | |||||||||||||  |||||||    
T  27817518 aaacaaactttgtttaaaaaaaacaaactttagtttttcaaatagagagaattcattagttttattgaaaaagataa-aataattgacaaaaggtataat 27817420  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||| | |||| | ||||||||||||  ||| |||| ||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  27817419 tgacaaaccgtacctttaaaataccaaaaagacagttaattagga-cgaaaaattcaccttaaaaagacacttaaaaatgaacggagggagta 27817328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 54675151 - 54675356
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataat 110  Q
    ||||| |||||||||||||||||| ||||||| ||| ||  |||||||||||||||||| |||| |||||||||||||| |||||||| || ||| ||||    
T  54675151 aatttaaagataacaagaaacaaactttgttttaaaaaa--aactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaat 54675247  T
Q  111 tgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacg 210  Q
      |||||| |||||||||||||||  || ||| |||||| |||||  ||  |||||||||||||  | ||||||  | ||| ||||||||||||||||||    
T  54675248 caacaaagggtataattgataaattgtatccttaaaatatcaaaatgacggttaaataggaacgctaaattcacattcaaacgacacttaaaaaggaacg 54675347  T
Q  211 gagggagta 219  Q
    |||||||||    
T  54675348 gagggagta 54675356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 9588847 - 9588660
Alignment:
Q  28 aaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| || |||||||||||||| |||||||||| |||||||||||||| |||||||| ||   | |||||||||||| |||||||    
T  9588847 aaacaaactttgtttaaaaaaaacaaactttagttttccaaatatataacattaattagtttttttgaaaaagatattagtaattgacaaagggtataat 9588748  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagg 214  Q
    |||||||||||||||| |||||| |||||  ||| ||||||||||| |  |||| | | ||||||  |||||||||||  ||||||||    
T  9588747 tgataaatcatacccttaaaatatcaaaaagacagttaaataggaatgctatatccgcactaaaacaacacttaaaaaataacggagg 9588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 19234007 - 19234166
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaac 159  Q
    |||| |||||||||||||||||||  ||||||||||||| || ||| |||||||||||| |||||||||| |||||||||  | |||||| |||||| ||    
T  19234007 ttttccaaatatatagcattaattttttttattgaaaaagataagagtaattgacaaagggtataattgaaaaatcatacatttaaaatatcaaaacgac 19234106  T
Q  160 atttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
      |||||||| ||||||| || ||| |||||| ||||||||||||||| |||||||||||    
T  19234107 ggttaaatagaaacgaaaaatccacactaaaacgacacttaaaaaggatcggagggagta 19234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 40 - 212
Target Start/End: Complemental strand, 296524 - 296351
Alignment:
Q  40 tttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat-attagaataattgacaaagtgtataattgataaatcata 138  Q
    ||||||| || ||||||||||||| |||||||||||||| |||||||||||| ||||||  || ||| |||||||||||| |||||| ||| ||||||||    
T  296524 tttaaaaaaataaactttagttttccaaatatatagcataaattagttttatagaaaaaagataagagtaattgacaaagggtataactgacaaatcata 296425  T
Q  139 ccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacgga 212  Q
    |||| ||||||||||||   || ||||||||||||| || || | | ||| || ||||||||||||||||||||    
T  296424 cccttaaaataccaaaatgtcagttaaataggaacgtaaaatccgcactagaacgacacttaaaaaggaacgga 296351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 15638443 - 15638618
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt--aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||| ||||| |||||||||||||||||| |||||||  |||| |||||||||| | ||  |||||||| | ||||||| |||||||| ||||||    
T  15638443 attttgtttgaattttaagataacaagaaacaaactttgtttttaaaaaaacaaacttttgattg-caaatataaaacattaataagttttatggaaaaa 15638541  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaa 177  Q
     |  ||| ||||||| |||| |||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||    
T  15638542 ga--agattaattgataaagggtataattgacaaataatactcttaaaataccaaaacaacatttaaataggaacgaaa 15638618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 7259718 - 7259864
Alignment:
Q  57 tagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaac 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||                ||||||||| |||||| ||||||    
T  7259718 tagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa----------------tcatacccttaaaatatcaaaac 7259801  T
Q  157 aacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     ||  |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  7259802 gacggttaaataggaacaaaaaattcactctaaaaagacacttaaaaaggaacggagggagta 7259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 44940825 - 44940921
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  44940825 tttgtttaaatctgaaaataacaagaaacaaattttgttttaaaaaaacaaactttaatttttcaaatatatagcattaattagttttattaaaaaa 44940921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 19578440 - 19578288
Alignment:
Q  23 acaagaaacaaattttgttt--aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtg 120  Q
    |||||||||||| |||||||  |||| |||||||||| |||||  ||||||||| ||||||||||||||||||||||| |  |||  ||||||||||| |    
T  19578440 acaagaaacaaactttgttttaaaaaaaacaaacttttgttttctaaatatataacattaattagttttattgaaaaagacaagagcaattgacaaaggg 19578341  T
Q  121 tataattgataaatcataccctcaaaataccaaaacaacatttaaataggaac 173  Q
    ||||||||| ||||| |||| | ||||||| ||||| ||| ||||||||||||    
T  19578340 tataattgacaaatcgtaccattaaaatactaaaacgacaattaaataggaac 19578288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 27264200 - 27264025
Alignment:
Q  42 taaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccc 141  Q
    ||||| ||||||||||  |||| |||| | ||||||||||||| ||||||||||||| || ||| |||||||||||  |||||||||| |||||||| ||    
T  27264200 taaaataacaaactttgtttttccaaaaagatagcattaattaattttattgaaaaagataagagtaattgacaaatggtataattgacaaatcatatcc 27264101  T
Q  142 tcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    | || ||| |||||  ||| |||||||  ||||||| ||||| |||||||| ||||| ||||||||||||||||||||    
T  27264100 ttaagata-caaaaagacagttaaatataaacgaaa-attcatcctaaaaatacactaaaaaaggaacggagggagta 27264025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 1272489 - 1272413
Alignment:
Q  66 aaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||| ||||||||||||    
T  1272489 aaatatatagcattaattagttttattgaaaaatataagagtaattgacaaagggtatagttgaaaaatcataccct 1272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 2440612 - 2440781
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatat 101  Q
    |||||||||||||| || | ||||| ||||||| ||||||||||| ||  |||||||||||||||||||||||  |||||||| |||||||| |||| ||    
T  2440612 ttttgtttaaattttaaaa-aacaacaaacaaactttgtttaaaaaaa--aactttagtttttcaaatatatataattaattaattttattg-aaaagat 2440707  T
Q  102 tagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaa 176  Q
     | | |||||||||||| |||||||||| |||||||| | | |||||| |||||  ||| |||||||| ||||||    
T  2440708 aaaactaattgacaaagggtataattgacaaatcatatctttaaaatatcaaaa-gacacttaaatagaaacgaa 2440781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23701899 - 23702003
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttg--tttaaaacaacaaactttagtttttcaa--atatatagcattaattagttttattgaaa 96  Q
    ||||||||||||||| |||||||||  ||||||||||||  ||||||| || |||||||||||||||||  ||||||| |||| ||||||||||||||||    
T  23701899 attttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaaa 23701998  T
Q  97 aatat 101  Q
    |||||    
T  23701999 aatat 23702003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 375877 - 375698
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa-caaactttagtttttcaaatatata--gcattaattagttttattgaaaa 97  Q
    |||||||| |||||| | |||||||||||||||| ||||||||||| || |||| |||| |||| ||||||||||  |||||||||| ||||||| ||||    
T  375877 attttgttaaaattttaggataacaagaaacaaactttgtttaaaaaaaacaaaatttaattttccaaatatataaagcattaattaattttattaaaaa 375778  T
Q  98 atattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaa 177  Q
    | || ||| |||||||||||   ||||||| | |||||||||  | |||||| |||||| |   |||||||| |||||||    
T  375777 agataagagtaattgacaaaagatataattaacaaatcatacttttaaaatatcaaaacgatggttaaatagaaacgaaa 375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 16237547 - 16237747
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatat 101  Q
    |||| ||||||||||||||| |||| ||| ||| ||||||||||| || ||| || | |||| |||||| |||||||||||||| |||||||||||||||    
T  16237547 ttttatttaaatttgaagattacaaaaaaaaaactttgtttaaaaaaaaaaaattaa-ttttccaaatagatagcattaattagctttattgaaaaatat 16237645  T
Q  102 tagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaa 201  Q
     | | |||||||||||                || |||  | ||||||||||||  ||| |||||||||||||||| |||   |||||||||||||||||    
T  16237646 aatagtaattgacaaa----------------tcgtactatgaaaataccaaaaagacagttaaataggaacgaaaaattattcctaaaaagacacttaa 16237729  T
Q  202 aaaggaacggagggagta 219  Q
    ||||||||||||||||||    
T  16237730 aaaggaacggagggagta 16237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 19187669 - 19187789
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| || ||  |||| |||| || |||||||| | |||| |||| || ||||    
T  19187669 aacaaactttaatttttcaaatatatatcattaattagttttattgaaaaaaataagtgtaatcgacacagagtataatttacaaattatacacttaaaa 19187768  T
Q  148 taccaaaacaacatttaaata 168  Q
    ||| ||||| ||| |||||||    
T  19187769 tactaaaacgacaattaaata 19187789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 23272157 - 23272054
Alignment:
Q  25 aagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtata 124  Q
    |||||||||| ||||||||| | || ||| |||| ||||| |||||||||||||||||| |||||||||||||| || ||||||||||| ||| ||||||    
T  23272157 aagaaacaaactttgtttaagaaaa-aaattttaattttttaaatatatagcattaatttgttttattgaaaaagataagaataattgagaaaatgtata 23272059  T
Q  125 attga 129  Q
    |||||    
T  23272058 attga 23272054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23720354 - 23720459
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt---aaaacaacaaactttagtttttcaa--atatatagcattaattagttttattgaa 95  Q
    ||||||||||||||| |||||||||  |||||||||||||||   |||| || |||||||||||||||||  ||||||| |||| |||||||||||||||    
T  23720354 attttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaa 23720453  T
Q  96 aaatat 101  Q
    ||||||    
T  23720454 aaatat 23720459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23738810 - 23738915
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt---aaaacaacaaactttagtttttcaa--atatatagcattaattagttttattgaa 95  Q
    ||||||||||||||| |||||||||  |||||||||||||||   |||| || |||||||||||||||||  ||||||| |||| |||||||||||||||    
T  23738810 attttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaa 23738909  T
Q  96 aaatat 101  Q
    ||||||    
T  23738910 aaatat 23738915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21934474 - 21934537
Alignment:
Q  35 ttttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  21934474 ttttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattaaaaaa 21934537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 25342350 - 25342537
Alignment:
Q  17 aagataacaagaaacaaattttgtttaaaacaaca-aactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgaca 115  Q
    |||||||||| ||| ||| || |||||||| || | || ||||||||| |||||||||| ||||||||||||||||| ||||  || | | |||||||||    
T  25342350 aagataacaaaaaataaacttggtttaaaaaaaaacaaatttagttttccaaatatataacattaattagttttattaaaaacgataaaagtaattgaca 25342449  T
Q  116 aagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaa 203  Q
    |||  ||||||||| ||||| |||| | ||||||||||||| ||  ||||||| |||||  | || ||| || ||| |||||||||||    
T  25342450 aaggatataattgacaaatcgtacctttaaaataccaaaacgacggttaaataagaacgttaaatccacactcaaacgacacttaaaa 25342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23772195 - 23772312
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-----aaaacaacaaactttagtttttcaa--atatatagcattaattagttttattg 93  Q
    ||||||||||||||| |||||||||  |||||||||||||||     |||| || |||||||||||||||||  ||||||| |||| |||||||||||||    
T  23772195 attttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattg 23772294  T
Q  94 aaaaatattagaataatt 111  Q
    |||||||| ||| |||||    
T  23772295 aaaaatataagagtaatt 23772312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 45667578 - 45667468
Alignment:
Q  8 ttaaatttgaagataacaagaaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaa 106  Q
    |||||||| |||| |||||||| |||| ||||||||||| || |||||||| ||||| |||||| ||||||||||||| ||||||||||||| || | |     
T  45667578 ttaaattttaagaaaacaagaatcaaactttgtttaaaaaaaacaaactttcgttttccaaatagatagcattaattaattttattgaaaaagatcaaag 45667479  T
Q  107 taattgacaaa 117  Q
    |||||||||||    
T  45667478 taattgacaaa 45667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 38751175 - 38751268
Alignment:
Q  123 taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggaggga 216  Q
    ||||||| ||||| ||| || ||||||| ||||| |||| |||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  38751175 taattgacaaatcgtactcttaaaatactaaaacgacatataaataagaacaaaaaattcaccctaaaacgacacttaaaaaggaacggaggga 38751268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 15772393 - 15772305
Alignment:
Q  6 gtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    ||||||||||| ||||||  ||||||||| ||||||||||| ||||||||  | ||||||||||| ||| |||||||||||||||||||||    
T  15772393 gtttaaatttgtagataa--agaaacaaactttgtttaaaaaaacaaactcgaatttttcaaatagataacattaattagttttattgaaa 15772305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 1405284 - 1405182
Alignment:
Q  72 atagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaatagga 171  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||  |||||||||| ||||  |||| | |||||||||||||   ||||||||| ||    
T  1405284 atagcattaattagtgttatttaaaaatattagagtaattgacaaatggtataattgacaaattgtacctttaaaataccaaaacggtatttaaataaga 1405185  T
Q  172 acg 174  Q
    |||    
T  1405184 acg 1405182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3751595 - 3751492
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt--------aaaacaacaaactttagtttttcaaatatatagcattaattagttttatt 92  Q
    ||||||||||||||| |||||||||||||||||| |||||||        | || |||||||||||| ||| |||||||||| |||||||||||||||||    
T  3751595 attttgtttaaatttaaagataacaagaaacaaactttgtttctttgtttagaaaaacaaactttaggtttccaaatatataacattaattagttttatt 3751496  T
Q  93 gaaa 96  Q
    ||||    
T  3751495 gaaa 3751492  T

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Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 21934603 - 21934684
Alignment:
Q  138 accctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||| ||||||| ||||| ||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||||| |||||    
T  21934603 acccttaaaatactaaaacgacagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaagaaacggagagagta 21934684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 44940956 - 44941055
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    ||||||| |||| |||||||||| ||||| |||||| ||||||||||||| |   |||||||||||  ||| ||||||||||||| ||||||||||||||    
T  44940956 taattgataaagggtataattgaaaaatcgtacccttaaaataccaaaacgatggttaaataggaa-taaaaattcaccctaaaacgacacttaaaaagg 44941054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 633291 - 633358
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaag 118  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  || ||| ||||||||||||    
T  633291 aaactttagttttccaaatatataacattaattagttttattgaaaatgataagagtaattgacaaag 633358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 29556509 - 29556598
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcatacc 140  Q
    ||||||| |||||||||||| | | ||||  ||||||||||||||||| || ||| ||||||| ||| |||||||||||||||| |||||    
T  29556509 aaacttttgtttttcaaatagagaacatttgttagttttattgaaaaagataagagtaattgagaaattgtataattgataaattatacc 29556598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 20140992 - 20141095
Alignment:
Q  25 aagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtata 124  Q
    |||||||||| ||||||||| | || |||||||| ||||| ||||| ||| |||||||| |||||||||||||| || ||| ||||||| |||  |||||    
T  20140992 aagaaacaaactttgtttaagaaaa-aaactttaattttttaaatacataacattaatttgttttattgaaaaagataagagtaattgagaaaaggtata 20141090  T
Q  125 attga 129  Q
    |||||    
T  20141091 attga 20141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38751045 - 38751140
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||| || ||||||||||||||||||||||||||||         ||||||||| |||||||||||||||| ||||||||||| |||||    
T  38751045 attttgtttaaatctgtagataacaagaaacaaattttgtttaaa--ttttttttttagttttccaaatatatagcattacttagttttattaaaaaa 38751140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2599189 - 2599144
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||    
T  2599189 attttgtttaaatttaaagataacaagaaacaaactttgtttaaaa 2599144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 2599660 - 2599697
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2599660 ctaaaaagacacttaaaaaggaacggagggagtactat 2599697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7259644 - 7259693
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttg-tttaaaacaa 49  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  7259644 attttgtttaaatttgaagataataagaaacaaattttgttttaaaacaa 7259693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 16237009 - 16236972
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16237009 ctaaaaagacacttaaaaaggaacggagggagtactat 16236972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 2599087 - 2598991
Alignment:
Q  123 taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||| ||||| |||||| |||||| |||||  | | |||||||| || ||||  |||| |||||||||| ||||||||| ||||||||||||||    
T  2599087 taattgacaaatcgtacccttaaaatatcaaaaagatagttaaatagaaatgaaaatttcatcctaaaaagatacttaaaaaagaacggagggagta 2598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 25479709 - 25479620
Alignment:
Q  13 tttgaagataacaagaaacaaattttgtttaaaacaa----caaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||| ||||||||| ||| ||| ||||| ||||||||    ||||||| | ||||||||||||||| ||||||||||||| |||||||||    
T  25479709 tttgcagataacaacaaataaactttgtataaaacaaaaaacaaacttaaatttttcaaatatataacattaattagtttgattgaaaaa 25479620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 45667478 - 45667398
Alignment:
Q  123 taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaa 203  Q
    ||||||| |||||||| ||| ||||||| ||||  ||| |||||||||||||||| ||| || ||||| ||||||||||||    
T  45667478 taattgacaaatcataaccttaaaatactaaaaagacagttaaataggaacgaaaaatttactctaaatagacacttaaaa 45667398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21959661 - 21959702
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  21959661 attttgtttaaatttgaagataacaataaactaattttgttt 21959702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 25841866 - 25841906
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  25841866 ttttatttaaatttgaagataacaaaaaacaaattttgttt 25841906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 38416356 - 38416447
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatatta-----gaataattgacaaagtgtataattgataaat 134  Q
    ||||||||| | ||||||||||  ||| ||||||||||||||||||| ||||| ||      ||||||||| ||| ||||||||||||||||    
T  38416356 aacaaacttgaatttttcaaatggataacattaattagttttattgagaaataataaacactaataattgagaaaatgtataattgataaat 38416447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 10614653 - 10614555
Alignment:
Q  76 cattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacg 174  Q
    ||||||||||||||| ||||||| || ||| ||||||| |||  ||| || ||| ||||| |||||  ||||| ||||||| ||| ||||||| |||||    
T  10614653 cattaattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttacccataaaatgccaaaacgacagttaaataagaacg 10614555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 296587 - 296546
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  296587 attttgtttaaattttaagataacaagaaacgaaatttgttt 296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 7259318 - 7259285
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||| |||||||||||||||||||||||||||    
T  7259318 ctaaaacgacacttaaaaaggaacggagggagta 7259285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 48214073 - 48214044
Alignment:
Q  193 gacacttaaaaaggaacggagggagtacta 222  Q
    ||||||||||||||||||||||||||||||    
T  48214073 gacacttaaaaaggaacggagggagtacta 48214044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 9588896 - 9588864
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  9588896 ttttgtttaaattttaagataacaagaaacaaa 9588864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 42735566 - 42735610
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||| |||||||| || |||||| |||||||||||    
T  42735566 ttttgtttaaatttaaagataacgaggaacaaactttgtttaaaa 42735610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45759881 - 45759921
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtt 41  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  45759881 attttgtttaaatttaaagataacaagaaacgaactttgtt 45759921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 46973428 - 46973400
Alignment:
Q  191 aagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||||||||||||||||    
T  46973428 aagacacttaaaaaggaacggagggagta 46973400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 1674721 - 1674944
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-------aaaacaacaaactttagtttttcaaatatatagcattaattagttttattg 93  Q
    ||||| |||||||||||||||||||||||||||||||| |||       |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1674721 attttatttaaatttgaagataacaagaaacaaattttattttaaaaccaaaaaaacaaactttagtttttcaaatatataacattaattagttttattg 1674820  T
Q  94 aaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaag 193  Q
    |||||||| |||||||||||||||| |||||||||| ||||| |||||| ||||||| ||||| ||| ||||| |||||||||| ||||| |||||||||    
T  1674821 aaaaatataagaataattgacaaag-gtataattgacaaatcgtacccttaaaatactaaaacgacagttaaa-aggaacgaaaaattcatcctaaaaag 1674918  T
Q  194 acacttaaaaaggaacggagggagta 219  Q
    |||||||||||| |||||||||||||    
T  1674919 acacttaaaaagaaacggagggagta 1674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 6295705 - 6295930
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaact-ttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||   ||||||||||||||| ||||||||||||||||||||| |||||     
T  6295705 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaaaaaaaaaaaattagtttttcaaatagatagcattaattagttttatttaaaaag 6295804  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacg-aaatattcaccctaaaaagacact 198  Q
    || | | ||| |||||||| |||||||| |||||||  ||||| ||||||||||||  ||| ||||||| ||||| ||| ||||||||||||||||||||    
T  6295805 ataaaagtaagtgacaaagggtataattaataaatcgcacccttaaaataccaaaaagacagttaaataagaacgaaaaaattcaccctaaaaagacact 6295904  T
Q  199 taaaaaggaacggagggagtactata 224  Q
    ||||||||||||||||||||| ||||    
T  6295905 taaaaaggaacggagggagtagtata 6295930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 11238231 - 11238422
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| || ||| ||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||| |    
T  11238231 aaacaaactttgtttaaaaaaataaattttagttttccaaatatatatcattaattagttttattgaaaaatataagaataattgccaaagggtataact 11238330  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || ||||| |||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  11238331 gacaaatcgtacccttaaaataccaaaaccacagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaagaacggagagagta 11238422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 2655844 - 2655638
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaaca----aactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || |    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  2655844 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaataaaaactttagttttccaaatatataacattaattagttttattgaaaaa 2655745  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
    ||| ||| |||||||||||  |||||||||||||||| |||||| |||||||||||||  || |||||||||||||||| ||||||| |   ||||||||    
T  2655744 tataagagtaattgacaaatggtataattgataaatcgtacccttaaaataccaaaacggcaattaaataggaacgaaaaattcacctt---aagacact 2655648  T
Q  199 taaaaaggaa 208  Q
    ||||||||||    
T  2655647 taaaaaggaa 2655638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 36319926 - 36320143
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa----caaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||    ||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  36319926 tttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaaaaaacaaacattagttttccaaatagatagcattaattagttttattgaaaaa 36320025  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
     || ||| |||||||||||  |||||||||| ||||| || ||| ||||||||||||  ||| ||||||| |||||||| || ||||||||||||||| |    
T  36320026 gataagagtaattgacaaatggtataattgacaaatcgta-ccttaaaataccaaaaagacagttaaataagaacgaaaaatgcaccctaaaaagacatt 36320124  T
Q  199 taaaaaggaacggagggag 217  Q
    |||||||||||| ||||||    
T  36320125 taaaaaggaacgaagggag 36320143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 788278 - 788451
Alignment:
Q  35 ttttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaat 134  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  788278 ttttgttttaaaaaacaaactttatttttccaaatatataacattaattagttttattgaaaaatattagaataattgacaaatggtataattgataaat 788377  T
Q  135 cataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacg 210  Q
    ||||  || ||||||||||||| | | |||||||||||||||| |||| | ||||||||||||||||||| |||||    
T  788378 cata--cttaaaataccaaaacgataattaaataggaacgaaaaattctctctaaaaagacacttaaaaaagaacg 788451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 39386823 - 39386615
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaac-aaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||| |||| |||||| || | |||||||||||  |||||||||     
T  39386823 attttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaaataaactttatttttccaaatagattgtattaattagtt--attgaaaaag 39386726  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||| |||||||||||| |||||||||| |||||||||||| ||||||| ||||  ||| ||||||||||| |||| | ||| |||||||||||||||    
T  39386725 ataagagtaattgacaaagggtataattgaaaaatcatacccttaaaatactaaaaagacacttaaataggaaagaaaaactcatcctaaaaagacactt 39386626  T
Q  200 aaaaaggaacg 210  Q
    |||||||||||    
T  39386625 aaaaaggaacg 39386615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13254717 - 13254938
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||  || ||||||||||| | |||||| |||||||||||||||||||||||||||     
T  13254717 attttatttaaatttgaagataataagaaacaaattttgtttaaaaataataaactttagttctccaaatagatagcattaattagttttattgaaaaag 13254816  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaatacc---aaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
    || ||| ||||||| |||  |||||||||| ||||| |||||| ||||||||   |||| ||||  | |||| |||||||| ||| ||||||||||||||    
T  13254817 ataagagtaattgataaaaggtataattgacaaatcgtacccttaaaataccaataaaaaaacagct-aatatgaacgaaaaatttaccctaaaaagaca 13254915  T
Q  197 cttaaaaaggaacggagggagta 219  Q
    ||| |||| ||||||||||||||    
T  13254916 ctttaaaaagaacggagggagta 13254938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 31623110 - 31623292
Alignment:
Q  41 ttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcatacc 140  Q
    |||||| |||||| |||||||||  ||||||||| ||||||||| |||||| ||||||||| ||||||||||| |||| ||||||||||||||| |||||    
T  31623110 ttaaaaaaacaaattttagttttcgaaatatataacattaattaattttatggaaaaatataagaataattgataaagggtataattgataaattatacc 31623209  T
Q  141 ctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
     | |||||| |  |||||||  |||||||||| | || ||||||| |||||||||| ||||  ||||||||||| ||||||||    
T  31623210 tttaaaatatccgaacaacagctaaataggaaaggaacattcaccttaaaaagacatttaaccaggaacggaggaagtactat 31623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 52414937 - 52414825
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    ||||||||||||  ||||||||| |||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  52414937 taattgacaaaggttataattgacaaatcatacccttaaaataccaaaacgacagttaaataggaacaaaaaattcacccttaaaagacacttaaaaagg 52414838  T
Q  207 aacggagggagta 219  Q
    |||||||||||||    
T  52414837 aacggagggagta 52414825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 3901130 - 3900933
Alignment:
Q  20 ataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagt 119  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||| |||||||||||||| |||||||| || ||| ||||  ||||||     
T  3901130 ataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagg 3901033  T
Q  120 gtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||  |||||| |||||| |||||  ||  |||||||||||||  | ||||||  | ||| |||||||||||||||||||| ||||||    
T  3901032 gtataattgataaattgtacccttaaaatatcaaaatgacggttaaataggaacgctaaattcacattcaaacgacacttaaaaaggaacggatggagta 3900933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 50488740 - 50488937
Alignment:
Q  20 ataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagt 119  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||| |||||||||||||| |||||||| || ||| ||||  ||||||     
T  50488740 ataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagg 50488837  T
Q  120 gtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||  |||||| |||||| |||||  ||  |||||||||||||  | ||||||  | ||| |||||||||||||||||||| ||||||    
T  50488838 gtataattgataaattgtacccttaaaatatcaaaatgacggttaaataggaacgctaaattcacattcaaacgacacttaaaaaggaacggatggagta 50488937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52415070 - 52414972
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  52415070 attttgtttaaatctgaagataagaagaaacaaattttgtttaaaaaaaacaaactttagttttccaaatatataacattaattagttttattaaaaaa 52414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 32769124 - 32769027
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttta--aaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| ||||||||||||||||||||||||||||   ||| || |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32769124 tttgtttaaatatgaagataacaagaaacaaattttgttttttaaaaaataaactttagtttttcaaatatatatcattaattagttttattaaaaaa 32769027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 4671546 - 4671450
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| |||||| ||||||||| ||||||||||| |||||||||||||||| |||||    
T  4671546 tttgtttaaatctgaagataataagaaacaaattttgttttaaaaaaacaaattttagttttccaaatatatagtattaattagttttattaaaaaa 4671450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 43021208 - 43021044
Alignment:
Q  55 tttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaa 154  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||| ||||  |||||||||| ||||| ||| || ||| |||||||    
T  43021208 tttagtttttcaaatatataacattaattagttttattgataaatataagagtaattggcaaatggtataattgacaaatcgtactcttaaagtaccaaa 43021109  T
Q  155 acaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || | | |||||||| ||||  | || |   || ||| ||||||||||||| |||||||||||||    
T  43021108 acgagagttaaatagaaacggtaaatccgtactcaaacgacacttaaaaagaaacggagggagta 43021044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 10430513 - 10430609
Alignment:
Q  33 aattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattga 129  Q
    ||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||| ||||| || ||| |||||||||||  ||||||||||    
T  10430513 aattttgtttaaaaatacaaacttgagttttgcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaatggtataattga 10430609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 4396014 - 4396226
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaa-----caac-aaactttagtttttcaaatatatagcattaattagttttattgaa 95  Q
    |||||||||||||| ||| |||| ||||||||| |||||||||||     |||| |||||||||||||||||||      ||||||||||||||||||||    
T  4396014 ttttgtttaaattttaagctaacgagaaacaaactttgtttaaaaaacaacaaccaaactttagtttttcaaatt-----cattaattagttttattgaa 4396108  T
Q  96 aaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagac 195  Q
    ||| ||  || |||||||||||||  |||||||| |||| |||| || ||||||| ||||| ||| ||||||| ||||   | ||  || ||| || |||    
T  4396109 aaa-atatgagtaattgacaaagtaaataattgacaaattatactcttaaaatactaaaactacagttaaataagaacactaaatctacactagaacgac 4396207  T
Q  196 acttaaaaaggaacggagg 214  Q
    |||||||||||||||||||    
T  4396208 acttaaaaaggaacggagg 4396226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 219
Target Start/End: Original strand, 40519193 - 40519385
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataa-ttgacaaag-----tgta----taa 125  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||| |||    ||||||     | ||    |||    
T  40519193 tttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaaccaaacaaagaaaaatatacgagtaa 40519292  T
Q  126 ttgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||| |||||| ||||| ||||||| ||||| ||  ||||||| |||| ||| || |||||||||| | |||||||||||||||||||||||||    
T  40519293 ttgacaaatcacacccttaaaatactaaaacgacggttaaata-gaacaaaaaatgcaccctaaaacggcacttaaaaaggaacggagggagta 40519385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 23699422 - 23699484
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23699422 tttgtttaaaagaagaaactttagttttccaaatatatagcattaattagttttattgaaaaa 23699484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 30280034 - 30279925
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||| |||||||||| |||||  ||||| ||||||| ||||  ||| |||||||||||| |||  ||||||||||||  ||||||||||||     
T  30280034 taattgacaaagggtataattgacaaatcgcacccttaaaatactaaaatgacagttaaataggaacaaaaagttcaccctaaaacaacacttaaaaaga 30279935  T
Q  207 aacggaggga 216  Q
    ||||||||||    
T  30279934 aacggaggga 30279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 32768992 - 32768881
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    ||||||| |||| |||||||||| ||||| |||||| |||||| ||| || ||| |||||||| ||| ||| ||||||||||||| || |||||||||||    
T  32768992 taattgataaagagtataattgacaaatcgtacccttaaaatatcaagacgacagttaaatag-aacaaaaaattcaccctaaaacgatacttaaaaagg 32768894  T
Q  207 aacggagggagta 219  Q
    |||||||| ||||    
T  32768893 aacggaggaagta 32768881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 23699519 - 23699626
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacg-aaatattcaccctaaaaagacacttaaaaag 205  Q
    |||||||||||| |||||||||| ||||| || ||| ||||||| ||||| ||  ||||||||||||| ||| ||||||||| ||| || ||||||||||    
T  23699519 taattgacaaagggtataattgacaaatcgtatccttaaaatacaaaaacgactgttaaataggaacgaaaaaattcacccttaaacgaaacttaaaaag 23699618  T
Q  206 gaacggag 213  Q
    ||||||||    
T  23699619 gaacggag 23699626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 10101672 - 10101762
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaat 134  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||||||||||||| || ||| ||||||| |||| |||||| ||| ||||    
T  10101672 aaaaaaacaaactttagttttccaaatagatagcatt-attagttttattgaaaaagataagagtaattgagaaagggtataagtgacaaat 10101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 21535845 - 21535892
Alignment:
Q  70 atatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  21535845 atatagcattaattagttttattgaaaaatataagaataattgacaaa 21535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 37710419 - 37710560
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttatt---gaaa 96  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||| |||| || ||||| |||||||  ||||| | || ||| ||||||||||||    |||    
T  37710419 attttgtttaaatttgaagataccaaaaaacaaactttatttaaaaaaaataaactgtagttttaaaaataaagagtatttattagttttatttaaaaaa 37710518  T
Q  97 aatattagaataattgacaaagtgtataattgataaatcata 138  Q
    || || ||| ||||||| |||| |||||||||||||||||||    
T  37710519 aaaataagagtaattgagaaagagtataattgataaatcata 37710560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 23698817 - 23698747
Alignment:
Q  77 attaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||||||||||||||| |||||||| ||| ||||||||||||  ||||||||| |||||||||||| ||||    
T  23698817 attaattagttttatttaaaaatataagagtaattgacaaaggatataattgacaaatcatacccttaaaa 23698747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 52281813 - 52281700
Alignment:
Q  36 tttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaat 134  Q
    |||||||||||  ||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||  || || |||| ||||  ||||| ||| ||||    
T  52281813 tttgtttaaaattaacaaactttagttttttaaatagataacattaattagttttattgaaaaagatccgagtagttgagaaaggatataagtgacaaat 52281714  T
Q  135 cataccctcaaaat 148  Q
    || ||||| |||||    
T  52281713 caaacccttaaaat 52281700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 39157176 - 39157128
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  39157176 aacaaactttagtttttcaaatatataacattaattagttctattgaaa 39157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 19269812 - 19269741
Alignment:
Q  28 aaacaaattttgtttaaaacaac-aaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||||||| ||| ||||||| ||||| ||||||||||  |||||||| |||||||||||||    
T  19269812 aaacaaattttgtttaaaaaaaccaaacttttgttttccaaatatatattattaattaattttattgaaaaa 19269741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 788217 - 788258
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  788217 attttgtttaaatttgaagataacaagaaataaattttgttt 788258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 4671370 - 4671313
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||| ||| ||||||||||||| |||||||||||| |||||||| |||||    
T  4671370 ttaaataggaacaaaaaattcaccctaaaacgacacttaaaaatgaacggagagagta 4671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 23697783 - 23697876
Alignment:
Q  76 cattaattagttttattgaaaaatattagaataattgac-aaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaata 168  Q
    ||||||| ||||||||  |||||||| |||||||||||| ||| | |||||||||  |||| |||||| | ||||||||||||||| |||||||    
T  23697783 cattaatcagttttatcaaaaaatataagaataattgaccaaaatatataattgacgaatcgtacccttataataccaaaacaacaattaaata 23697876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30280130 - 30280075
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttatt 92  Q
    ||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||    
T  30280130 tttgtttaaaa-aacaaactttagttttccaaatatacaacattaattagttttatt 30280075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 21967163 - 21967289
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||| ||||| |||||| ||||| ||  ||||||||||||||| ||||||| || ||| ||||| | |||  ||| || ||| ||||| |||||| ||||    
T  21967163 aacatacttttgtttttaaaatagatgtcattaattagttttaatgaaaaagatgagagtaattaagaaatggtacaagtgacaaatcttacccttaaaa 21967262  T
Q  148 taccaaaacaacatttaaataggaacg 174  Q
    | ||||||| ||| ||||||| |||||    
T  21967263 tgccaaaacgacagttaaataagaacg 21967289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23699360 - 23699401
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  23699360 attttgtttaaatctgaagataacaagaaacacattttgttt 23699401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23697665 - 23697716
Alignment:
Q  1 attttgtttaaatttgaagataac-aagaaacaaattttg--tttaaaacaa 49  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  23697665 attttgtttaaatttgaagataacaaagaaacaaattttggttttaaaacaa 23697716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 9361984 - 9361949
Alignment:
Q  188 aaaaagacacttaaaaaggaacggagggagtactat 223  Q
    |||| |||||||||||||||||||||||||||||||    
T  9361984 aaaatgacacttaaaaaggaacggagggagtactat 9361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 31623059 - 31623098
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  31623059 tttgtttaaatttaaagataagaagaaacaaattttgttt 31623098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 51974397 - 51974432
Alignment:
Q  188 aaaaagacacttaaaaaggaacggagggagtactat 223  Q
    |||| |||||||||||||||||||||||||||||||    
T  51974397 aaaatgacacttaaaaaggaacggagggagtactat 51974432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15660624 - 15660567
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||| |||||||   || |||| ||||||||||||||||||||| |||||    
T  15660624 ttaaataggaacaaaatatttctccaaaaatgacacttaaaaaggaacggagagagta 15660567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 32186609 - 32186544
Alignment:
Q  32 aaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaa 97  Q
    ||||||||||| ||| || |||||| | |||| |||||| ||| ||||||||||||||||| ||||    
T  32186609 aaattttgtttcaaaaaataaacttgaattttgcaaatacataacattaattagttttattaaaaa 32186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 32769596 - 32769633
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  32769596 ctaaaacgacacttaaaaaggaatggagggagtactat 32769633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 28679027 - 28678999
Alignment:
Q  193 gacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||||||||||||||||||||    
T  28679027 gacacttaaaaaggaacggagggagtact 28678999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25496781 - 25496561
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25496781 attttgtttaaatttaaagataataagaaacaaactttgcttaaaataaaacaaactttagtttttcaaatagatagcattaattagttttattgaaaaa 25496682  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
     || | | ||||| |||||| ||||||||||||||||||||||| |||||| ||||| |||| ||||||||||| |||| |||||| |||||||||||||    
T  25496681 gataaaagtaattaacaaagggtataattgataaatcatacccttaaaatagcaaaaaaacagttaaataggaatgaaaaattcacactaaaaagacact 25496582  T
Q  199 taaaaaggaacggagggagta 219  Q
    |||||| ||| ||||||||||    
T  25496581 taaaaatgaatggagggagta 25496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 32233760 - 32233540
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaa-ctttagtttttcaaatatata-gcattaattagttttattgaaaaa 98  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||| || ||| ||||||| || |||||| ||| ||||||||||||||||||||||||    
T  32233760 attttatttaaatttgaagataacaataaacaaactttgtttaaaaaaaaaaaactttagtgttccaaatagataagcattaattagttttattgaaaaa 32233661  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
     || ||| |||||||||||| |||||||||| |||||| ||||| ||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||    
T  32233660 gataagagtaattgacaaagggtataattgacaaatcacacccttaaaataccaaaaagacagttaaataggaacgaaaaattcaccctaaaaagacact 32233561  T
Q  199 taaaaaggaacggagggagta 219  Q
    |||||||||||| ||||||||    
T  32233560 taaaaaggaacgaagggagta 32233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 3443711 - 3443902
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||| ||| | ||||||||    
T  3443711 aaacaaactttgtttaaaaaaacaaactttagtttttcaaatatatagcattaattagtttgattgaaaaaaataagaacaattgtcaacgggtataatt 3443810  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || ||| |||||||| ||||||||||||| ||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||    
T  3443811 gacaaaacatacccttaaaataccaaaacgacaattaaataggaatgaaaaattcatcctaaaaagacacttaaaaaggaacggagggagta 3443902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 9455367 - 9455149
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaac------aacaaactttagtttttcaaatatatagcattaattagttttattgaaaa 97  Q
    |||||||||||||||||||||||||||  |||||  ||||||||      ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9455367 ttgtttaaatttgaagataacaagaaaataatttgttttaaaacgaaacaaacaaactttattttttcaaatatatagcattaattagttttattgaaaa 9455268  T
Q  98 atattagaataattgacaaagtgtataattg-ataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
    |||| |||||||||||||||  ||||||||| | |||||||||  | ||||||||||||| ||| |||||||||||| ||| ||||| ||||||||||||    
T  9455267 atataagaataattgacaaatggtataattgaaaaaatcatacatttaaaataccaaaacgacagttaaataggaacaaaaaattcaacctaaaaagaca 9455168  T
Q  197 cttaaaaaggaacggaggg 215  Q
    ||||||||| || ||||||    
T  9455167 cttaaaaagaaaaggaggg 9455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 25400600 - 25400382
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||| ||  |||||||||||||| |||||| ||||||||||||||||||||||||||  |    
T  25400600 tttgtttaaatttaaagataataagaaacaaactttgcttaaaataaaacaaactttagttttccaaatagatagcattaattagttttattgaaaagga 25400501  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | | | ||||| |||||| ||||||||||||||||||||||| |||||| ||||| || | ||||||||||| |||| |||||| |||| ||||||||||    
T  25400500 taaaagtaattaacaaagggtataattgataaatcatacccttaaaatagcaaaaaaatagttaaataggaatgaaaaattcacactaagaagacactta 25400401  T
Q  201 aaaaggaacggagggagta 219  Q
    |||||||| ||||||||||    
T  25400400 aaaaggaatggagggagta 25400382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 7578188 - 7578338
Alignment:
Q  28 aaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7578188 aaacaaactttgtttaaaaaaaacaaactttaattttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaagggtataat 7578287  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaa 177  Q
    ||| | |||||||||| |||||| |||||| ||| ||||||||||||||||    
T  7578288 tgacagatcatacccttaaaatatcaaaacgacagttaaataggaacgaaa 7578338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 34146274 - 34146095
Alignment:
Q  40 tttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcatac 139  Q
    ||||||| |||||||||||||||| |||||| | | ||||||||||||||||||||||| || ||| |||||||||||| |||||||||| ||||| |||    
T  34146274 tttaaaaaaacaaactttagttttccaaatagacatcattaattagttttattgaaaaagataagagtaattgacaaagagtataattgacaaatcgtac 34146175  T
Q  140 cctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||||||||||||  ||| | ||||| |||||||| ||||||| |||||| ||||||||||| ||||| ||| ||||    
T  34146174 ccttaaaataccaaaaagacagtcaaataagaacgaaaaattcaccataaaaaaacacttaaaaatgaacgaaggaagta 34146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 36 - 219
Target Start/End: Original strand, 2742927 - 2743094
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||                |||||    
T  2742927 tttgtttaaaaaaacaaactttaatttttcaaatatatagcattaattagttttattgaaaaatataaaaataattgac----------------aaatc 2743010  T
Q  136 ataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||    
T  2743011 atacccttaaaatacaaaaacaacagttaaataggaacgaaaaattcaccctaaaaaaacacttaaaaaaaaacggagggagta 2743094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 27231905 - 27231709
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaac-----aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||| |||||||||||||||||| |||||||||||      |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  27231905 ttgtttaaatttaaagataacaagaaacaaactttgtttaaaaagaacgaacaaactttagttttccaaatagatagcattaattagttttattgaaaaa 27231806  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
     || ||||||||| |||||| |||||||||||||||| |||| | |||| ||| |||  ||| |||||||| ||||||| ||||  | ||||||||||    
T  27231805 aataagaataattaacaaagagtataattgataaatcgtacctttaaaacacccaaa-gacaattaaatagtaacgaaaaattcctcataaaaagaca 27231709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 1530550 - 1530703
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||| |||||||||| ||||||||||||  |||| |||||| || ||||||||| |||||||||| ||||||||||| ||||||||||||||| |    
T  1530550 attttgtttcaatttgaagaaaacaagaaacaagctttgattaaaaaaa-aaactttaggttttcaaatagatagcattaatcagttttattgaaaaaaa 1530648  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaa 155  Q
    | ||| ||||||||||| ||||||||||| ||||| |||||| ||||||||||||    
T  1530649 taagagtaattgacaaaatgtataattgacaaatcgtacccttaaaataccaaaa 1530703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 4418657 - 4418482
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||| || ||  |||||||||||| |||||||||| ||||||||||||    
T  4418657 aaaaaaactaactttagttttccaaatatatagcattaattagttttatt-aaaaagatgagggtaattgacaaagagtataattgacaaatcataccct 4418559  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||| ||| ||||||| |||||  | || | | || |||  ||||||||| | ||||||||||||||    
T  4418558 caaaataccaaaacgacagttaaatatgaacgttaaatccgcactcaaacaacacttaaatatgaacggagggagta 4418482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 1358897 - 1359082
Alignment:
Q  28 aaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||| |||| || |||||||||||||||||||      ||||||||||||||| ||||||| |||||| ||||||| |||| | |||||    
T  1358897 aaacaaactttgttttaaaaaaataaactttagtttttcaaat------cattaattagttttaatgaaaaagattagagtaattgataaagggcataat 1358990  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| |||||||||||| |||||| |||||| ||| |||| ||||||||||| || | | ||| || ||||||||||||||||| |||||||||    
T  1358991 tgacaaatcatacccttaaaatatcaaaacgacagttaagtaggaacgaaaaatccgcactagaacgacacttaaaaaggaac-gagggagta 1359082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16393836 - 16393632
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||| ||  |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  16393836 attttgtttaaatttgaagataacaaaaaataaactttgtttaaaaaaaaccaaactttagttttccaaatagatagcattaattagttttattgaaaaa 16393737  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
      | | | ||||||||                ||||| |||| | ||||||| ||||  ||| |||||||||||||||| |||||| |||||||||||||    
T  16393736 gctaaaagtaattgac----------------aaatcgtacctttaaaatacaaaaaagacagttaaataggaacgaaaaattcactctaaaaagacact 16393653  T
Q  199 taaaaaggaacggagggagta 219  Q
    |||||| |||||||| |||||    
T  16393652 taaaaatgaacggagagagta 16393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 16599358 - 16599506
Alignment:
Q  28 aaacaaattttgtttaaaacaac-aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataat 126  Q
    ||||||| ||||||||||| ||  ||||||||||||| |||||||||| ||||||||||||||||||||||| || ||| ||||||| |||  ||||||     
T  16599358 aaacaaactttgtttaaaaaaaataaactttagttttacaaatatatatcattaattagttttattgaaaaagataagagtaattgataaatggtataac 16599457  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacga 175  Q
    ||| |||| ||||| | ||||||| ||||||||| ||||||||||||||    
T  16599458 tgacaaattatacctttaaaatactaaaacaacagttaaataggaacga 16599506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 41411430 - 41411636
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataat 110  Q
    ||||| |||||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||| | |||||||||||| |||||||| || ||| ||||    
T  41411430 aatttaaagataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataactttaattagtttt-ttgaaaaagataagagtaat 41411527  T
Q  111 tgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacg 210  Q
      |||||| |||||||||||||||  || ||| |||||| |||||  ||  |||||||||||||  | ||||||  | ||| |||||||||||| |||||    
T  41411528 caacaaagggtataattgataaattgtatccttaaaatatcaaaatgacggttaaataggaacgctaaattcacattcaaacgacacttaaaaatgaacg 41411627  T
Q  211 gagggagta 219  Q
    |||| ||||    
T  41411628 gaggaagta 41411636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 14896717 - 14896547
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||||   |||| |||| |||||||  |||    
T  14896717 aaaaaaacaaacttaagttttttaaatatataacattaattagttttattgaaaaagataagagtaattgacaaatgatatatttgacaaatcatcacct 14896618  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggag 213  Q
     ||||||||||||  ||| |||||||||||||  | || | | |||||| ||||||||||||| |||||||    
T  14896617 taaaataccaaaatgacagttaaataggaacgttaaatccgcactaaaacgacacttaaaaagaaacggag 14896547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 29315957 - 29316069
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||| |||||||||| ||||| ||| || ||||||| ||||| ||| |||||||||||  ||| ||||||||||||| ||||||||||||||    
T  29315957 taattgacaaagggtataattgaaaaatcgtactcttaaaatactaaaacgacagttaaataggaataaaaaattcaccctaaaacgacacttaaaaagg 29316056  T
Q  207 aacggagggagta 219  Q
    |||||||||||||    
T  29316057 aacggagggagta 29316069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 40557319 - 40557123
Alignment:
Q  20 ataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagt 119  Q
    ||||||||||||||| ||||||| ||| ||  |||||||||||||||||| |||| |||||||||| |||||||||||| || ||| ||||  ||||||     
T  40557319 ataacaagaaacaaactttgttttaaaaaa--aactttagtttttcaaatttataacattaattag-tttattgaaaaagataagagtaatcaacaaagg 40557223  T
Q  120 gtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||  || ||| |||||| |||||  ||  ||||||||||| |  | ||||||  | ||| |||||||||||||||||||| ||||||    
T  40557222 gtataattgataaattgtaaccttaaaatatcaaaatgacggttaaataggaaagctaaattcacattcaaacgacacttaaaaaggaacggatggagta 40557123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 29315824 - 29315922
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  29315824 attttgtttaaatctgtagataacaagaaacaaattttgttttaaaaaaaaaaactttagttttccaaatatatagcattacttagttttattaaaaaa 29315922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 38401684 - 38401487
Alignment:
Q  14 ttgaagataacaagaaacaaattttgtttaaaacaac-aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattg 112  Q
    ||||||||||||||||||||  ||||||||||| ||  |||||||| ||||  ||||| ||| ||||||||| ||||||| ||||| || ||| ||||||    
T  38401684 ttgaagataacaagaaacaatctttgtttaaaaaaaataaactttaattttcgaaataaataacattaattaattttattaaaaaagataagagtaattg 38401585  T
Q  113 acaaagtgtataattgataaatcataccctcaaaatacca--aaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    |||||   ||||||||| |||| ||| ||| ||||||  |  ||| ||||||||||||| ||||||| ||||| | ||||||||||||||||| ||||    
T  38401584 acaaataatataattgacaaattatatccttaaaataaaattaaaaaacatttaaatagaaacgaaaaattcatcataaaaagacacttaaaatggaa 38401487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 34039022 - 34038819
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||| || ||||||||| ||||| ||||||||| |||||| || |||||||||||||     
T  34039022 attttatttaaattttaagataacaagaaacaaactttgtttaaaaaaaacaaactttaattttttaaatatataacattaactatttttattgaaaaag 34038923  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || |  |||||||||                ||||||| |||| ||||||| ||||| ||| |||||||||||||||| ||   | |||||| || ||||    
T  34038922 ataaatataattgac----------------aaatcatgcccttaaaatactaaaacgacagttaaataggaacgaaaaatctgcactaaaacgatactt 34038839  T
Q  200 aaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||    
T  34038838 aaaaaggaacggagggagta 34038819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 30887895 - 30888010
Alignment:
Q  76 cattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacga 175  Q
    ||||||||||||||||| ||||| || ||| |||||||||||| |||||||||| ||||  |||||| |||| |||||||  ||| ||||||||||||||    
T  30887895 cattaattagttttattaaaaaagataagagtaattgacaaag-gtataattgacaaattctacccttaaaacaccaaaaatacacttaaataggaacga 30887993  T
Q  176 aatattcaccctaaaaa 192  Q
    || ||||||| ||||||    
T  30887994 aaaattcaccataaaaa 30888010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 39628238 - 39628386
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgttt---------aaaacaacaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||||||||||||||||||||||||| ||| |||         |||| |||||||||||||||| |||||| ||| |||||||||||||||||||    
T  39628238 ttgtttaaatttgaagataacaagaaacaaacttttttttcaaaaaaaaaaaaaacaaactttagttttccaaatagataacattaattagttttattga 39628337  T
Q  95 aaaatattagaataattga-caaagtgtataattgataaatcataccct 142  Q
    |||| || ||| |||||||  |||  |||||||||| ||||| ||||||    
T  39628338 aaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccct 39628386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 39637788 - 39637936
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgttt---------aaaacaacaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||||||||||||||||||||||||| ||| |||         |||| |||||||||||||||| |||||| ||| |||||||||||||||||||    
T  39637788 ttgtttaaatttgaagataacaagaaacaaacttttttttcaaaaaaaaaaaaaacaaactttagttttccaaatagataacattaattagttttattga 39637887  T
Q  95 aaaatattagaataattga-caaagtgtataattgataaatcataccct 142  Q
    |||| || ||| |||||||  |||  |||||||||| ||||| ||||||    
T  39637888 aaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccct 39637936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 5870835 - 5870769
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||  || |||||||||||||||    
T  5870835 aaactttagtttttcaaatagataacattaattagttttattgaaaatgataagaataattgacaaa 5870769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 38457354 - 38457289
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattga 113  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| || | |||||||||    
T  38457354 aacaaactttagttttccaaatagatagcattaattagttttattgaaaaagataaaaataattga 38457289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 4418848 - 4418957
Alignment:
Q  6 gtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattg-aaaaatattag 104  Q
    |||||||||||||||||| |||||||||  || |||||||| || ||||||  |||||||||||||    |||||||||||||||||| ||||| || ||    
T  4418848 gtttaaatttgaagataataagaaacaatcttcgtttaaaaaaataaacttatgtttttcaaatat----cattaattagttttattgaaaaaaaataag 4418943  T
Q  105 aataattgacaaag 118  Q
    | ||||||||||||    
T  4418944 agtaattgacaaag 4418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 7695303 - 7695403
Alignment:
Q  55 tttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaa 154  Q
    |||||||||||||||| ||| |||||| |||||||||||||||| || ||| ||||| | |||   ||||||||| ||||| |||||| |||||||||||    
T  7695303 tttagtttttcaaatagataacattaactagttttattgaaaaagataagagtaattaaaaaatgatataattgacaaatcgtacccttaaaataccaaa 7695402  T
Q  155 a 155  Q
    |    
T  7695403 a 7695403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 1256683 - 1256821
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgtttaaaa----caacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||| |||||||||||| |||||||||||     || |||||||| ||||  ||||| ||  ||||||||| |||||||  ||||     
T  1256683 ttgtttaaatttgaagattacaagaaacaaactttgtttaaaaaaagaaataaactttaattttctaaatagatgacattaattaattttatt-taaaag 1256781  T
Q  100 attagaataattgacaaagtgtataattgataaatcatac 139  Q
    || ||| |||||||||||| | |||||||| |||||||||    
T  1256782 ataagagtaattgacaaagggcataattgacaaatcatac 1256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 3741629 - 3741536
Alignment:
Q  111 tgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaag 205  Q
    |||||||  |||||||||| ||||| |||  | ||||||||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||||||    
T  3741629 tgacaaatggtataattgacaaatcgtacttt-aaaataccaaaacgacagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaag 3741536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 3741730 - 3741668
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| || || |||||||||| |||||||||||||||||||||||||||| |||||    
T  3741730 tttgtttaaaaaaataagctttagttttccaaatatatagcattaattagttttattaaaaaa 3741668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 36682652 - 36682591
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36682652 tttgtttaaaaaaataaactttagtttttcaaatatata-cattaattagttttattaaaaaa 36682591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 43026703 - 43026814
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaaatattagaataattga-caaagtgtataattgataaatcataccctcaaaataccaaaacaa 158  Q
    |||||||||||| || ||||||||| |||||||||||||||| |||||||||||  |||  || ||||||| ||||| || | | ||||||| ||||| |    
T  43026703 tttttcaaatatgtaacattaattaattttattgaaaaatataagaataattgataaaaacgtgtaattgacaaatcgtaactttaaaatactaaaacga 43026802  T
Q  159 catttaaatagg 170  Q
    || |||||||||    
T  43026803 cagttaaatagg 43026814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3443658 - 3443699
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  3443658 atttggtttaaatttgaagataacaagaaacaaattttgttt 3443699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1358846 - 1358890
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaa 45  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  1358846 attttgtttaaattttaagataacaagaaacaaactttgtttaaa 1358890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 45083023 - 45083135
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||||||| |||||||| |||||| ||  ||||||||||||||||||||||| || ||| ||||| |  |||  ||||||| | |||||||| | |    
T  45083023 aaaaaaacaaacgttagttttccaaatacattacattaattagttttattgaaaaagataagagtaattaaacaagaatataattaacaaatcatatctt 45083122  T
Q  143 caaaataccaaaa 155  Q
     ||||||||||||    
T  45083123 taaaataccaaaa 45083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3741788 - 3741741
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaaca 48  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  3741788 attttctttaaatatgaagataacaagaaacaaattttgttttaaaca 3741741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11087263 - 11087218
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||    
T  11087263 attttgtttaaatttgaagataataagaaacaagctttgtttaaaa 11087218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 43553446 - 43553506
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtacta 222  Q
    |||||||||||| ||| |||   || ||| |||||||||||||||||||||||||||||||    
T  43553446 ttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggagggagtacta 43553506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 44666214 - 44666310
Alignment:
Q  76 cattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaa 172  Q
    ||||||||||||||||||||||| || |||  |||||| |||| |||||| ||| ||||||| | || |||||| |||| | ||| ||| |||||||    
T  44666214 cattaattagttttattgaaaaagataagagaaattgagaaagggtataagtgagaaatcatgctcttaaaatatcaaatcgacaattatataggaa 44666310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7695224 - 7695258
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaat 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  7695224 attttgtttaaatttgaagataacaagaagcaaat 7695258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 32234291 - 32234325
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtac 220  Q
    ||||||| |||||||||||||||||||||||||||    
T  32234291 ctaaaaaaacacttaaaaaggaacggagggagtac 32234325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 34146334 - 34146296
Alignment:
Q  4 ttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  34146334 ttgtttaaatttgaagataacaagaaacagactttgttt 34146296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 7695422 - 7695459
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  7695422 ctaaaaagacacttaaaatagaacggagggagtactat 7695459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11384752 - 11384707
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||||| | ||||||| ||||||| |||||||||||    
T  11384752 attttgtttaaatttgcatataacaaaaaacaaactttgtttaaaa 11384707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 27232276 - 27232309
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||| ||||||||||||||||||||||||||    
T  27232276 ctaaaaaaacacttaaaaaggaacggagggagta 27232309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38457429 - 38457384
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||||||| ||||||||||  ||| |||||||||||    
T  38457429 attttgtttaaatttgaaaataacaagaattaaactttgtttaaaa 38457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 39303719 - 39303776
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||| ||| |||   || |||| |||||||||||||||||||||||||||    
T  39303719 ttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggagggagta 39303776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 7578144 - 7578172
Alignment:
Q  10 aaatttgaagataacaagaaacaaatttt 38  Q
    |||||||||||||||||||||||||||||    
T  7578144 aaatttgaagataacaagaaacaaatttt 7578172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 11707713 - 11707741
Alignment:
Q  191 aagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||||||||||||||||    
T  11707713 aagacacttaaaaaggaacggagggagta 11707741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 14263550 - 14263518
Alignment:
Q  193 gacacttaaaaaggaacggagggagtactatat 225  Q
    |||||||||||||||||||||||||||| ||||    
T  14263550 gacacttaaaaaggaacggagggagtacaatat 14263518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 2e-63; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 9089573 - 9089791
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaa-ctttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  9089573 ttttgtttaaatttgaagataacaagaaacatacattgtttaaaaaaaaaaagctttaatttttcaaatagatagcattaattagttttattgaaaaaga 9089672  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactta 200  Q
    | ||| |||||||||||| ||| |||||||||||| |||||| |||| ||||||| |||| ||||||||||||||||   ||||||||||||||||||||    
T  9089673 taagagtaattgacaaagggtacaattgataaatcgtacccttaaaacaccaaaaaaacagttaaataggaacgaaaatatcaccctaaaaagacactta 9089772  T
Q  201 aaaaggaacggagggagta 219  Q
    ||||| |||||| ||||||    
T  9089773 aaaagaaacggatggagta 9089791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 45635409 - 45635615
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaaca----aactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || |    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  45635409 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaataaaaactttagttttccaaatatataacattaattagttttattgaaaaa 45635508  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacact 198  Q
    ||| ||| |||||||||||  |||||||||||||||| |||||| |||||||||||||  || |||||||||||||||| ||||||| |   ||||||||    
T  45635509 tataagagtaattgacaaatggtataattgataaatcgtacccttaaaataccaaaacggcaattaaataggaacgaaaaattcacctt---aagacact 45635605  T
Q  199 taaaaaggaa 208  Q
    ||||||||||    
T  45635606 taaaaaggaa 45635615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 38434244 - 38434416
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaatac 150  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| | |||||||    
T  38434244 aaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgataaagggtataattgataaattatacctttaaaatac 38434343  T
Q  151 caaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt-aaaaaggaacggagggagtacta 222  Q
    |||||| ||| |||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||||||    
T  38434344 caaaacgacagttaaataggaacgaaaaattcaccctaaaacgacacttaaaaaaaaaacggagggagtacta 38434416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 50721030 - 50720811
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaac--aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    |||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||||||| |||||||||||||||||||||||||||     
T  50721030 ttttgtttaaatttgaagataataagaaacaaactttgtttaaaaataaacaaacttttgtttttcaaatagatagcattaattagttttattgaaaaag 50720931  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||| |||||||||||  |||||||||| | |||||| | | |||| |||||||  ||| |||||||||||||||| | ||||| |||||| ||| ||    
T  50720930 ataagagtaattgacaaatggtataattgacacatcatatctttaaaacaccaaaaagacagttaaataggaacgaaaaaatcaccttaaaaaaacattt 50720831  T
Q  200 aaaaaggaacggagggagta 219  Q
    ||||||||| ||||||||||    
T  50720830 aaaaaggaatggagggagta 50720811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 54982709 - 54982932
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa----caaactttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||  |    |||||||||||||| |||||| ||||||||| |||||||||||||||    
T  54982709 attttgtataaatttgaagataacaagaaacaaactttgtttaaaaagaaaaccaaactttagttttccaaatagatagcattagttagttttattgaaa 54982808  T
Q  97 aatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
    |  || | | |||||||||||| |||||||||| ||||  ||||   ||||||||||||  | | ||||||| |||||||| ||||||||||||||||||    
T  54982809 aggataaaagtaattgacaaagagtataattgacaaattgtacctataaaataccaaaaagatagttaaatatgaacgaaaaattcaccctaaaaagaca 54982908  T
Q  197 cttaaaaaggaacggagggagtac 220  Q
    ||||||||||||| ||||||||||    
T  54982909 cttaaaaaggaacagagggagtac 54982932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 38840370 - 38840593
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa-----caacaaactttagtttttcaaatatatagcattaattagttttattgaa 95  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||      ||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  38840370 attttgtttaaatttgaagataacaagaaacaaactttgttttaaaataacaaacaaactttagtttttcaaatagatagcattaattagttttactaaa 38840469  T
Q  96 aaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagac 195  Q
    ||| || | | |||||| |||||  ||||||||| ||||  |||||| ||||||  |||| |||| |||||||||||| ||| ||||||  ||||||||     
T  38840470 aaagataaaagtaattgtcaaaggatataattgacaaattctacccttaaaatattaaaaaaacagttaaataggaacaaaaaattcactttaaaaagat 38840569  T
Q  196 acttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||||||    
T  38840570 acttaaaaaggaacggagggagta 38840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 46195849 - 46195657
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||  ||| ||||||||||||||| ||||||| || | | |||||||||||| ||||||||    
T  46195849 aaacaaactttgtttaaaaaaacaaactttaatttttcaaattgataacattaattagttttactgaaaaagataaaagtaattgacaaagggtataatt 46195750  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtac 220  Q
    || ||||  ||||||  ||| |||||||  ||| |||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  46195749 gacaaattgtacccttcaaaaaccaaaaagacagttaaataggaacaaaaaattcaccctaaaaagacacttgaaaaggaacagagggagtac 46195657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 215
Target Start/End: Original strand, 24538291 - 24538477
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||||  | |||||    
T  24538291 aaacaaactttgtttaaaa-aacaaactttagttttccaaatatataacactaattagttttattgaaaaatataagaataattgacaaaggttgtaatt 24538389  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggaggg 215  Q
    || |||||||||||| ||||||||||||  ||| |||||||| |||||||| ||    ||||||  ||| ||||||||||||||||||    
T  24538390 gacaaatcatacccttaaaataccaaaatgacagttaaatagaaacgaaattttttttctaaaacaacatttaaaaaggaacggaggg 24538477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 19443555 - 19443745
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| | ||||||||| ||||||||||| ||||||||||| |||| |||| ||||||||| | ||||| || | | |||||||||||| ||||||||    
T  19443555 aaacaaactatgtttaaaaaaacaaactttaatttttcaaatagatagtattacttagttttactaaaaaagataaaagtaattgacaaagggtataatt 19443654  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || ||||| || ||| ||||||||||||  ||| |||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||    
T  19443655 gacaaatcgtatccttaaaataccaaaaagacagttaaataggaacgaaaaattcaccataaaaagacactt-aaaagaaacggagggagta 19443745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 37209936 - 37210097
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-------aaaacaacaaactttagtttttcaaatatatagcattaattagttttattg 93  Q
    |||||||||||||||||||||||||||||||||| |||||||       |||| |||||||||||||||| |||||| |||||||| |||||||||||||    
T  37209936 attttgtttaaatttgaagataacaagaaacaaactttgttttaaaaaaaaaaaaacaaactttagttttccaaatagatagcattgattagttttattg 37210035  T
Q  94 aaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaa 155  Q
    ||||| || | |||||||||||||| |||||||||| |||| ||||||| ||||||||||||    
T  37210036 aaaaagataaaaataattgacaaagggtataattgacaaattatacccttaaaataccaaaa 37210097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 38045484 - 38045323
Alignment:
Q  59 gtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaa 158  Q
    ||||| |||||| ||||||||||||| ||||||||||| |||| ||| ||||||| |||| |||||||||||||||| |||||| ||||||||||||  |    
T  38045484 gttttccaaatagatagcattaattacttttattgaaagatataagagtaattgataaagggtataattgataaatcgtacccttaaaataccaaaaaga 38045385  T
Q  159 catttaaataggaacgaaatattca-ccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |  |||||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||    
T  38045384 ctgttaaataggaacgaaaaattcacccctaaaaacacacttaaaaaggaacggatggagta 38045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 45666387 - 45666211
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||||||||||| |||| |||||| |||  |||||| ||||||||||||||| || | | |||||||||||| |||||||||| ||||| |||| |    
T  45666387 aaaaaaacaaactttaattttccaaatagatattattaataagttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtacctt 45666288  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     ||||||||||||  ||| ||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  45666287 taaaataccaaaaagacagttaaatatgaacgaaaaattcatcctaaaaagacacttaaaaagaaacggagggagta 45666211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 24074131 - 24074288
Alignment:
Q  62 tttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacat 161  Q
    ||||||||| ||| |||||||||||||||||||||||  | ||| |||||||||||| |||||||||| ||||  || ||| ||||||| ||||  |||     
T  24074131 tttcaaatagataacattaattagttttattgaaaaagttaagagtaattgacaaagggtataattgacaaatagtatccttaaaatactaaaaagacaa 24074230  T
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  24074231 ttaaataggaacgaaaaattcaccctaaaaagacacttaaaaagaaactgagggagta 24074288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 37371399 - 37371509
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  37371399 tttgtttaaaaaaacaaactttggtttttcaaatatatatcattaat-agttttattgaaaaatataagaataattgacaaagggtataattgataaatc 37371497  T
Q  136 ataccctcaaaa 147  Q
    ||||||| ||||    
T  37371498 atacccttaaaa 37371509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 6949150 - 6949013
Alignment:
Q  72 atagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaatagga 171  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||  |||||||||| ||||| | | || ||||||||||||  ||| ||||||| ||    
T  6949150 atagcattaattagttttattgaaaaagataagagtaattgacaaatggtataattgacaaatcgtgcacttaaaataccaaaaagacagttaaataaga 6949051  T
Q  172 acgaaatattcaccctaaaaagacacttaaaaaggaacg 210  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  6949050 acgaaa-attcaccctaaaaagacatttaaaaaggaacg 6949013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2492975 - 2492863
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt--aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||| || |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  2492975 attttgtttaaatttgaagataacaaaaaacaaattttgtttttaaaaaaataaactttagtttttcaaatagatagcattaattagttttattaaaaaa 2492876  T
Q  99 tattagaataatt 111  Q
     || ||| |||||    
T  2492875 gataagagtaatt 2492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 17330839 - 17330740
Alignment:
Q  120 gtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||| |||||||||||| ||||||||||||  ||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17330839 gtataattgacaaatcatacccttaaaataccaaaaatacagttaaataggaacgaaaaattcaccataaaaagacacttaaaaaagaacggagggagta 17330740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 49299850 - 49300037
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaa-taattgacaaagtgtataat 126  Q
    ||||||| |||||||||||    ||||| |||||||||||||| ||| |||| ||||||| |||||||||| | || || ||||| |||||| |||||||    
T  49299850 aaacaaactttgtttaaaa----aaactgtagtttttcaaatagataacattgattagttatattgaaaaaaaataaaagtaattaacaaagggtataat 49299945  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||| ||||| |||||| |||||| |||||  ||| |||||||| ||||||| ||| ||| ||||||| ||||||||||||||||||| |||||    
T  49299946 tgacaaatcctacccttaaaataacaaaaagacagttaaatagaaacgaaa-atttaccttaaaaagtcacttaaaaaggaacggagagagta 49300037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 33889599 - 33889488
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    ||||||| |||| |||||||||| ||||  |||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  33889599 taattgataaagagtataattga-aaattgtacccttaaaataccaaaacaacagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaagg 33889501  T
Q  207 aacggagggagta 219  Q
    ||||||| |||||    
T  33889500 aacggagagagta 33889488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 33889729 - 33889634
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||| ||||||||||||||||||||||||||||  || || ||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  33889729 tttgtttaaatctgaagataacaagaaacaaattttgtttttaaaaaaaaattttagttttccaaatatatagcattaattagttttattaaaaaa 33889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 34031957 - 34032105
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa-ttttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||| ||  ||||||||||||  ||||| |||  ||||||||||||||||||||||     
T  34031957 attttgtttaaatttaaaaataacaagaaacaaacttttgtttaaaaaaa--aactttagttttctaaatagataatattaattagttttattgaaaaag 34032054  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaatac 150  Q
    || | | ||||| |||||| |||||||||| ||||| |||||| |||||||    
T  34032055 ataaaactaattaacaaagggtataattgacaaatcgtacccttaaaatac 34032105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 20782584 - 20782443
Alignment:
Q  15 tgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgac 114  Q
    |||||| ||||| ||| ||| ||||| ||||| |  |||| ||||||||| |||||  ||||||| ||||||||||||||||||||| ||| |||||||     
T  20782584 tgaagaaaacaaaaaagaaactttgtataaaaaagtaaacattagttttttaaataggtagcatttattagttttattgaaaaatataagagtaattgag 20782485  T
Q  115 aaagtgtataattgataaatcataccctcaaaataccaaaac 156  Q
    ||||||||||||||| |||| ||||||| |||||| ||||||    
T  20782484 aaagtgtataattgaaaaattatacccttaaaatatcaaaac 20782443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 21342249 - 21342380
Alignment:
Q  82 ttagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatatt 181  Q
    ||||||||||||||||| || ||| ||||| |||||   |||||||||||||||||||||| |||||| |||||  ||| |||||||||||      |||    
T  21342249 ttagttttattgaaaaagataagagtaattaacaaatgatataattgataaatcatacccttaaaatatcaaaaagacagttaaataggaa------att 21342342  T
Q  182 caccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || |||||||| ||||||||||||||||||||||||||    
T  21342343 catcctaaaaaaacacttaaaaaggaacggagggagta 21342380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 23529597 - 23529471
Alignment:
Q  49 acaaactttagtttttcaaatatatagcattaattagttttattga-aaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||| |||| || | | ||||||| |||  |||||||||| ||||| |||||| ||||    
T  23529597 acaaattttagttttccaaataaatagcattaattagttttattgaaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtacccttaaaa 23529498  T
Q  148 taccaaaacaacatttaaataggaacg 174  Q
    || |||||||||| |||||||||||||    
T  23529497 tatcaaaacaacagttaaataggaacg 23529471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 667994 - 668083
Alignment:
Q  10 aaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||| |||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  667994 aaatctgaagacaacaagaaacaaattttgttttaaaaaaacaaactttagttttccaaatatataacattaattagttttatttaaaaa 668083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 668118 - 668230
Alignment:
Q  107 taattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaagg 206  Q
    |||||||||||| |||||||||| ||||  | |||| ||||||| ||||  ||| ||| |||||||| ||| ||||||||||||| ||||||||||||||    
T  668118 taattgacaaagggtataattgagaaattgtgcccttaaaatacaaaaaagacagttagataggaacaaaaaattcaccctaaaacgacacttaaaaagg 668217  T
Q  207 aacggagggagta 219  Q
    |||||||||||||    
T  668218 aacggagggagta 668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 49263020 - 49262924
Alignment:
Q  123 taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||  || ||| ||||||||  ||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  49263020 taattgataaatcatatacttaaattaccaaaaagacagttaaataggaacaaaaaattcaccctaaaaagacatttaaaaaggaacggagggagta 49262924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 21956479 - 21956605
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| |||||||||||||||||||||||  ||  |||||||||||||||||||||| || ||| || |||| |||   ||||| ||| ||||| ||||||    
T  21956479 aaaataacaaactttagtttttcaaataggtaatattaattagttttattgaaaaagataagagtatttgagaaaagatataagtgacaaatcgtaccct 21956578  T
Q  143 caaaataccaaaacaacatttaaatag 169  Q
     ||||||||||||||| | ||||||||    
T  21956579 taaaataccaaaacaataattaaatag 21956605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 25490545 - 25490439
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||||||  || ||| |||||||||||  |||||||| | ||||  |||||| ||||    
T  25490545 aacaaactttagttttccaaatatataacattaattatttttattgaaaatgataagagtaattgacaaatggtataattaacaaattttacccttaaaa 25490446  T
Q  148 taccaaa 154  Q
    |||||||    
T  25490445 taccaaa 25490439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25493965 - 25493839
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaa----------aacaacaaactttagtttttcaaatatatagcattaattagtttta 90  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |          || |||||||||||||||| |||||| ||| |||||||||||||||    
T  25493965 attttgtttaaatttgaagataccaagaaacaaactttgttttattctttaaataaaaacaaactttagttttccaaatagataacattaattagtttta 25493866  T
Q  91 ttgaaaaatattagaataattgacaaa 117  Q
    |||||||| || ||| |||||| ||||    
T  25493865 ttgaaaaagataagagtaattgtcaaa 25493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47944414 - 47944511
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||| | ||||| |||| ||||||||||||| |||| ||||||||||| ||||  ||||| ||||||||||| |||||||||||||||    
T  47944414 attttgtttaaatttta-gataaaaagacacaaattttgttttaaaaaaacaaactttaattttctaaatagatagcattaataagttttattgaaaaa 47944511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19443504 - 19443549
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19443504 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 19443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 53392632 - 53392558
Alignment:
Q  148 taccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    ||||||||  ||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||    
T  53392632 taccaaaaagacagttaaataggaacgaaaaattcaccataaaaa-acacttaaaaaggaacggaaggagtactat 53392558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1821526 - 1821571
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  1821526 attttgtttaaatttgaagataacaataaacaaattttgtttaaaa 1821571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 1821657 - 1821740
Alignment:
Q  131 aaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagg 214  Q
    |||||||||||| ||||||| ||||  | | |||||||  ||||||| |||||||||||| ||||||||||||| |||||||||    
T  1821657 aaatcatacccttaaaatacaaaaaagatagttaaataacaacgaaaaattcaccctaaagagacacttaaaaaagaacggagg 1821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 19443065 - 19443026
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactatat 225  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19443065 ctaaaaagacacttaaaaaggaacggagggagtactatat 19443026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 41502630 - 41502571
Alignment:
Q  39 gtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||| || |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  41502630 gtttaaaaaaaaaaactttagtttttcaaatatataacattaattaattttattaaaaaa 41502571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 1821574 - 1821644
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||| ||||||||||| || |||||||| |||| |||||| ||| ||||||||||||||| |||||||    
T  1821574 aaacaaactttgtttaaaaaaataaactttaattttccaaatagatatcattaattagttttactgaaaaa 1821644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 41502685 - 41502632
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactt 56  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| || ||||||    
T  41502685 tttgtttaaatctgaagataacaagaaacaaattttgttttaaaaaaaaaactt 41502632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49263122 - 49263029
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa-ttttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||||    || |||||| ||| |||||||||||||||||||||||    
T  49263122 attttgtttaaatttgaagatgacaagaaacaaagttttctttagaa--acaaactttg---ttccaaatagatatcattaattagttttattgaaaaa 49263029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49299798 - 49299843
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  49299798 attttctttaaatttgaaaataacaagaaacaaattttgtttaaaa 49299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 46196822 - 46196926
Alignment:
Q  71 tatagcattaattagttttattgaaaaa-tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaatag 169  Q
    |||| ||||||||||||||||||||||| ||| ||| |||||||||||  || ||||||| |||||||||  | ||||||| ||| | ||| ||||||||    
T  46196822 tataacattaattagttttattgaaaaaatataagagtaattgacaaatagtgtaattgacaaatcatacttttaaaatactaaagcgacaattaaatag 46196921  T
Q  170 gaacg 174  Q
     ||||    
T  46196922 aaacg 46196926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 6949262 - 6949219
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  6949262 tttgtttcaatttgaagataacaagaaacaaactttgtttaaaa 6949219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 33808944 - 33808886
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaag 118  Q
    ||||||||||||||| ||||||||| |||||||||||||| | ||| ||||| ||||||    
T  33808944 tttttcaaatatataacattaattaattttattgaaaaatgtaagagtaattaacaaag 33808886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53393479 - 53393381
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || ||    |  | || |||||| || |||||||||||||||||| ||||||    
T  53393479 attttgtttaaatttaaagataactagaaacaaactttgtttaaaaaaaaaacaaattttgttccaaatagatggcattaattagttttatttaaaaat 53393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24538238 - 24538287
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttg-tttaaaacaa 49  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  24538238 attttgtttgaattcgaagataacaagaaacaaattttgttttaaaacaa 24538287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 37209563 - 37209530
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||||||||||||||||||||||||||||    
T  37209563 ctaaaaagacacttaaaaaggaacggagggagta 37209530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37371338 - 37371379
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  37371338 attttatttaaatttgaagataacaagaaagaaattttgttt 37371379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45666458 - 45666413
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||    
T  45666458 attttgtttaaatttcaaaataacaagaaacaaactttgtttaaaa 45666413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46195899 - 46195866
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46195899 attttgtttaaatttgaagataacaagaaacaaa 46195866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 49299339 - 49299302
Alignment:
Q  186 ctaaaaagacacttaaaaaggaacggagggagtactat 223  Q
    |||||||||||||||||||||| |||||||||||||||    
T  49299339 ctaaaaagacacttaaaaaggagcggagggagtactat 49299302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 53370405 - 53370477
Alignment:
Q  28 aaacaaattttgttt--aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||| |||||||  |||| || |||||||||||||  |||||||||||||||| ||| ||||||||||||    
T  53370405 aaacaaactttgttttaaaaaaaaaaaactttagttttcaaaatatatagcattaactagatttattgaaaaa 53370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 30913612 - 30913537
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    |||||||||||||  ||||||||| | ||||||||||||||||||||| | || | ||||||| |||| ||||||||    
T  30913612 aaactttagttttcgaaatatataacgttaattagttttattgaaaaaca-taaagtaattgataaagggtataatt 30913537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 53370331 - 53370378
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa 49  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||||||    
T  53370331 ttttgtttaaattttaagataataagaaacaaactttgttttaaacaa 53370378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 53599990 - 53600049
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtact 221  Q
    |||||||||||| |||| ||   || |||| |||||||||||||||||||||||||||||    
T  53599990 ttaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacggagggagtact 53600049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 55343892 - 55343853
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  55343892 tttgtttaaatttaaagataacatgaaacaaattttgttt 55343853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 29971530 - 29971580
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||| ||||||    
T  29971530 aacaaacttgagtttttcaaatagatagtattaattaattttatcgaaaaa 29971580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 38044911 - 38044996
Alignment:
Q  31 caaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    |||| ||||||| ||| || ||||||||||||  |||||| |||  |||||||| |||||||||||||||| |||  ||||||||||    
T  38044911 caaactttgttttaaaaaaaaaactttagtttc-caaatagataatattaattaattttattgaaaaatataagagaaattgacaaa 38044996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 46016561 - 46016662
Alignment:
Q  18 agataacaagaaacaaattttgtttaaaacaacaaactttagtttttc--aaatatatagcattaattagttttattgaaaaatattagaataattgaca 115  Q
    |||||||||||||||||||||||||   | || ||||||||||||  |  | ||||||||  ||||||||||| ||||||||| || ||| ||||| |||    
T  46016561 agataacaagaaacaaattttgttttttaaaaaaaactttagtttaccatatatatatagttttaattagtttgattgaaaaagataagagtaattaaca 46016660  T
Q  116 aa 117  Q
    ||    
T  46016661 aa 46016662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 18135284 - 18135313
Alignment:
Q  192 agacacttaaaaaggaacggagggagtact 221  Q
    ||||||||||||||||||||||||||||||    
T  18135284 agacacttaaaaaggaacggagggagtact 18135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 38617511 - 38617568
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||| |||||||   || |||  |||||||||||||||||||||||||||    
T  38617511 ttaaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagta 38617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 42219055 - 42219092
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaa 97  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  42219055 ttttccaaatatataacattaattagttttattgaaaa 42219092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 49122494 - 49122523
Alignment:
Q  192 agacacttaaaaaggaacggagggagtact 221  Q
    ||||||||||||||||||||||||||||||    
T  49122494 agacacttaaaaaggaacggagggagtact 49122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 2684763 - 2684696
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataatt 111  Q
    |||| |||||||||||||||| |||||| |||||||| | | |||||||||||||| || ||| |||||    
T  2684763 aaaataacaaactttagttttccaaatagatagcattta-tcgttttattgaaaaagataagagtaatt 2684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 33890207 - 33890239
Alignment:
Q  187 taaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||| |||||||||||||||||||||||||||    
T  33890207 taaaacgacacttaaaaaggaacggagggagta 33890239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 37210119 - 37210151
Alignment:
Q  187 taaaaagacacttaaaaaggaacggagggagta 219  Q
    |||||||||||||||||||||||||||| ||||    
T  37210119 taaaaagacacttaaaaaggaacggaggaagta 37210151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 41502536 - 41502441
Alignment:
Q  123 taattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||| ||||| |||| | ||||||||||||   || ||||||| |||| ||| ||| ||| ||||| ||||||||||||| |||||| ||||||    
T  41502536 taattgacaaatcgtaccattaaaataccaaaatg-cagttaaataagaacaaaaaattaaccttaaaatgacacttaaaaagaaacggatggagta 41502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 27746570 - 27746379
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| || |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| | | ||||  |||||  ||||||||    
T  27746570 aaacaaacttcgtttaaaaaaataaactgtagtttttcaaatatatagcattaattagttttattgaaaaatataaaagtaataaacaaaaggtataatt 27746471  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || |||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27746470 gacaaatcatacccttaaaataccaaaacgacagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggaaggagta 27746379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 150264 - 150455
Alignment:
Q  28 aaacaaattttgtttaaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataa 125  Q
    ||||||| ||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  150264 aaacaaaatttgtttaaaaaaaatcaaactttagtttttcaaatatataacattaattagttttattgaaaaata--agagtaattgacaaagggtataa 150361  T
Q  126 ttgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||  |||| |||||| ||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  150362 ttgacgaatcgtacccttaaaataccaaaaagacagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggatggagta 150455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 4959369 - 4959558
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||| |||||||| | |||||||||||||||||||| ||||||| |||| ||| ||||| |||||||||  ||||||||    
T  4959369 aaacaaactttgtttaaaaaaacaa-ctttagttatccaaatatatagcattaattaattttattaaaaactataagaatgattgacaaacggtataatt 4959467  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagt 218  Q
    || |||||||||||| ||||||||||||| | | |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  4959468 gacaaatcatacccttaaaataccaaaacgatagttaaataggaacgaaaaatttaccctaaaaagacacttaaaaagaaacggagggagt 4959558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21252712 - 21252495
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaa--acaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||  | || |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  21252712 attttgtttaaatttaaagataacaagaaactaattttgtttaaagaaaaataaactttagtttttcaaatagatagcattaattaattttattgaaaaa 21252613  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcacccta-aaaagacac 197  Q
     || ||  |||||||||||| |||||||||| ||||| |||||| ||||||  ||||  ||| |||||||  ||||||| |||||||||| |||||||||    
T  21252612 gataagtgtaattgacaaagagtataattgacaaatcgtacccttaaaatattaaaaagacaattaaatataaacgaaaaattcaccctaaaaaagacac 21252513  T
Q  198 ttaaaaaggaacggaggg 215  Q
    |||||| |||||||||||    
T  21252512 ttaaaacggaacggaggg 21252495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 25965860 - 25966051
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||| | || ||||||||||||||||||||||||    |||| |||||||||||||||||| ||| |||||||||||| ||||| ||    
T  25965860 aaacaaactttgtttaagaaaataaactttagtttttcaaatatataatgataatgagttttattgaaaaatataagagtaattgacaaagggtatagtt 25965959  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || ||||| |||||| ||||||||||||| | | ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  25965960 gacaaatcgtacccttaaaataccaaaacgatagttaaataggaatgaaaaattcaccctaaaaagacatttaaaaaggaacggagggagta 25966051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 16806511 - 16806728
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattag-ttttattgaaaaat 99  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||  ||||||||||||||||||| | | |||||||||| |||| |||||||||    
T  16806511 attttgtttaaatttgaggataacaagaatcaaattttgtttaaaa-aaataactttagtttttcaaatagacaacattaattagttttttttgaaaaat 16806609  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||  |||||||||||| |||||||||| ||||| || ||  ||||||||||||  ||| ||||||| |||||||| |||||||||||||| ||||||    
T  16806610 ataagtgtaattgacaaagggtataattgacaaatcttatccctaaaataccaaaa-gacagttaaataagaacgaaaaattcaccctaaaaatacactt 16806708  T
Q  200 aaaaaggaacggagggagta 219  Q
    ||||||||||| || |||||    
T  16806709 aaaaaggaacgaagagagta 16806728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 16845792 - 16846009
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattag-ttttattgaaaaat 99  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||  ||||||||||||||||||| | | |||||||||| |||| |||||||||    
T  16845792 attttgtttaaatttgaggataacaagaatcaaattttgtttaaaa-aaataactttagtttttcaaatagacaacattaattagttttttttgaaaaat 16845890  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacactt 199  Q
    || ||  |||||||||||| |||||||||| ||||| || ||  ||||||||||||  ||| ||||||| |||||||| |||||||||||||| ||||||    
T  16845891 ataagtgtaattgacaaagggtataattgacaaatcttatccctaaaataccaaaa-gacagttaaataagaacgaaaaattcaccctaaaaatacactt 16845989  T
Q  200 aaaaaggaacggagggagta 219  Q
    ||||||||||| || |||||    
T  16845990 aaaaaggaacgaagagagta 16846009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 20171400 - 20171612
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatat 101  Q
    |||||||| |||| || |||||||||| |||| |||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||    
T  20171400 tttgtttatattttaacataacaagaaccaaactttgtttaaaaataacaaactttagttttccaaatatataacattaattagttttattgaaaaagat 20171499  T
Q  102 tagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaa 201  Q
     ||| |||||||||||| |||||||||| || |||| | ||||||||| | |||| ||| |||||||| ||||||| |||||| | | || |||||||||    
T  20171500 aagagtaattgacaaagggtataattgacaactcatgctctcaaaatagcgaaacgacagttaaatagaaacgaaaaattcacacaagaacgacacttaa 20171599  T
Q  202 aaaggaacggagg 214  Q
    ||| |||| ||||    
T  20171600 aaaagaacagagg 20171612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 34424771 - 34424943
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||  |||||||||| ||||| ||||||||||  ||||||||||||| ||||||||||| | |||||| ||||||| || ||||||| ||||     
T  34424771 tttgtttaaacaaacaaacttttgttttccaaatatataatattaattagttttgttgaaaaatataataataatcgacaaagggtttaattgacaaatt 34424870  T
Q  136 ataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    ||| ||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34424871 ataaccttaaaatacaaaaacgacatttaaatatgaacgaaaaattcaccctaaaaagacacttaaaaaggaa 34424943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 15507585 - 15507363
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaac------aacaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||| ||||| |||||||||| ||||||| ||||||| |||       |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15507585 attttgtttgaattttaagataacaaaaaacaaactttgttttaaaagaaacaaacaaactttagtttttcaattatatagcattaattag-tttattga 15507487  T
Q  95 aaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaaga 194  Q
    |||| || ||| |||||||||||| |||||||||| ||||||||||||  |||||||||| | ||| |||||||| ||  ||| || ||| |||||| ||    
T  15507486 aaaagataagagtaattgacaaagggtataattgacaaatcataccct-taaataccaaatcgacagttaaatagaaataaaaaatacacactaaaacga 15507388  T
Q  195 cacttaaaaaggaacggagggagta 219  Q
    ||||| |||||||||||||||||||    
T  15507387 cacttgaaaaggaacggagggagta 15507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 38589257 - 38589479
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaac----tttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    ||||||||||||| ||||||||| ||||| |||| |||| |||||| || ||||    |||||||||  ||||| ||||||||||||  |||||||||||    
T  38589257 attttgtttaaatgtgaagataaaaagaagcaaactttggttaaaaaaaaaaacaagttttagttttctaaatagatagcattaattgattttattgaaa 38589356  T
Q  97 aatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagaca 196  Q
    || || | | |||||||||||  |||||||||||||||| |||| | ||||||||||||   || |||||||||||||||| ||||||| |||||| |||    
T  38589357 aagataaaagtaattgacaaatggtataattgataaatcgtacctttaaaataccaaaatggcagttaaataggaacgaaaaattcaccataaaaaaaca 38589456  T
Q  197 cttaaaaaggaacggagggagta 219  Q
    |||||||||||||||| ||||||    
T  38589457 cttaaaaaggaacggatggagta 38589479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 11073940 - 11074135
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagtt--ttattgaaaaatattagaataattgacaaagtgtataa 125  Q
    ||||||| || |||||||| ||||||||||| || |  ||||| ||||||||||||| ||  || | |||||| || ||| |||||||||||| ||||||    
T  11073940 aaacaaacttggtttaaaaaaacaaactttaattctctaaataaatagcattaattaattagttttagaaaaagataagagtaattgacaaagggtataa 11074039  T
Q  126 ttgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtact 221  Q
    |||| ||||  |||||| ||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11074040 ttgacaaattgtacccttaaaataccaaaaagacagttaaataggaacgaaaaattcaccctaaaaagacacttaagaaggaacggagggagtact 11074135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 42756882 - 42756731
Alignment:
Q  39 gtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcata 138  Q
    |||||||  |||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||| ||||||||    
T  42756882 gtttaaataaacaaaccatagttttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaaagatataattgacaaatcata 42756783  T
Q  139 ccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaa 190  Q
    |||| ||||||||||||||||| ||||||| |||||||| ||| ||| ||||    
T  42756782 cccttaaaataccaaaacaacagttaaatatgaacgaaaaatttaccttaaa 42756731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44898244 - 44898085
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaac----tttagtttttcaaatatatagcattaattagttttattgaaa 96  Q
    |||||||||||||||||||||||||||||||  | ||||||||||| |||||||    |||||||||||||||||||| |||||||||||||||||||||    
T  44898244 attttgtttaaatttgaagataacaagaaacgcactttgtttaaaaaaacaaaccaactttagtttttcaaatatataacattaattagttttattgaaa 44898145  T
Q  97 aatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaac 156  Q
    || || ||| |||||||||||| |||||||||| ||||| |||| | ||||||| |||||    
T  44898144 aagataagagtaattgacaaagggtataattgaaaaatcgtacctttaaaatactaaaac 44898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 41541180 - 41540956
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaaca------acaaactttagtttttcaaatatatagcattaattagttttattga 94  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||| |      | ||||||||||||||||||||||||||||||||||||||||||||    
T  41541180 attttgtttaaattttaagataacaagaaacaaactttatttaaaaaacaaaaaataaactttagtttttcaaatatatagcattaattagttttattga 41541081  T
Q  95 aaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaaga 194  Q
    |||| || ||| ||| |||||||   ||||||| |||||| ||||||| ||||||||||||  | | |||||||| ||| ||| || | | ||| || ||    
T  41541080 aaaagataagagtaaatgacaaaagatataatttataaattatacccttaaaataccaaaatgagagttaaatagaaactaaaaatccgcactagaatga 41540981  T
Q  195 cacttaaaaaggaacggagggagta 219  Q
     ||||||||||||||| ||| ||||    
T  41540980 tacttaaaaaggaacgaaggaagta 41540956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 1397557 - 1397366
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaa-taattgacaaagtgtataat 126  Q
    ||||||| |||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||   |||||   || || |||||||||||| |||| ||    
T  1397557 aaacaaactttgattaaaa-aacaaactttaatttttcaaatagatagcattaattagttttacaaaaaaaagataaaagtaattgacaaagggtattat 1397459  T
Q  127 tgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||  ||||| ||| || |||||| |||||  ||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  1397458 tgccaaatcgtacgcttaaaatagcaaaaagacagttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaatggagggagta 1397366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 219
Target Start/End: Original strand, 20891301 - 20891479
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||| |||||||||||||||| ||||||||   |||||||||||||||||||||| ||  ||| |||||||||||   ||||||||||||||     
T  20891301 tttgtttaaaa-aacaaactttagttttccaaatataa--cattaattagttttattgaaaa-tacaagagtaattgacaaatgatataattgataaatt 20891396  T
Q  136 ataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     |||||| |||||| |||||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||||||| ||||||    
T  20891397 gtacccttaaaatatcaaaacgacagttaaataggaacgaaaaattcaccataaaaa-aaacttaaaaaggaacggatggagta 20891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 3309845 - 3310015
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| || | | ||||||||||| | ||||||||| ||||| |||||| ||||    
T  3309845 aacaaactttagtttttcaaatagatagcaataattagttttattgaaaaa-ataaaagtaattgacaaattctataattgacaaatcttaccctgaaaa 3309943  T
Q  148 taccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    || |||||  ||| |||||||| ||||||| ||||||  |||| |||| |||||||||||||| | ||||||    
T  3309944 tatcaaaaagacagttaaatagaaacgaaaaattcactataaagagacgcttaaaaaggaacgaaaggagta 3310015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 4700951 - 4701094
Alignment:
Q  31 caaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgat 130  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||| |||||||| ||||||||||||  || ||| |||||||||||  |||||||||||    
T  4700951 caaattttgtttaaaaaaacaatatttagttttccaaatatatagtattaattaattttattgaaaacgataagagtaattgacaaatagtataattgat 4701050  T
Q  131 aaatcataccctcaaaataccaaaacaacatttaaataggaacg 174  Q
    ||||| || ||| ||||||||||||  ||| |||||||||||||    
T  4701051 aaatcgtatccttaaaataccaaaagcacaattaaataggaacg 4701094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 11084004 - 11083814
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||  ||||||||||  ||||||||    
T  11084004 aaacaaactttgtttaaaa-aacaaactttagtttttcaaatatataacattaattagttttattaaaaaagatcagagaaattgacaaaaggtataatt 11083906  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     | ||||||| |||| ||||||| ||||| ||| |||||||| ||||  | || | | | | || |||| |||||||||||||| |||||||    
T  11083905 aacaaatcattcccttaaaatacaaaaacgacagttaaatagaaacgttaaatccgcaccagaacgacatttaaaaaggaacggtgggagta 11083814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 36244031 - 36244209
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||| | || ||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||| |||||||||||| |||||||||| |||||    
T  36244031 tttgtttaagaaaataaactttagttttccaaatatataacattaattagttttattaaaaaatataagagtaattgacaaagggtataattgacaaatc 36244130  T
Q  136 ata-ccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagg 214  Q
    ||| || | ||||||||||||  ||| ||| |||||||| | | || ||| ||| || ||||||||||||| ||||||||    
T  36244131 atatccttaaaaataccaaaatgacagttagataggaac-ataaatccacactagaacgacacttaaaaagaaacggagg 36244209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 45273373 - 45273542
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaac---aaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||    |||||||| ||||  ||||| ||| |||||||||||||||||||||||    
T  45273373 ttttgtttaaattttaagataacaagaaacaaactttgtttaaaaaaaatataaactttatttttctaaatagatatcattaattagttttattgaaaaa 45273472  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaata 168  Q
     || ||| |||||||||||| ||||||||||  |||| | |||| ||||||||||||  ||| |||||||    
T  45273473 gataagagtaattgacaaagggtataattgacgaatcgtgcccttaaaataccaaaaagacaattaaata 45273542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 1770148 - 1770293
Alignment:
Q  11 aatttgaagataacaagaaacaaattttgttt-aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataa 109  Q
    ||||| |||||||||||||| | | ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||| | |    
T  1770148 aattttaagataacaagaaatagactttgttttaaaaaaacaaactttagtttttcaaatatataacattaattagttttattgaaaaaattaagagtga 1770247  T
Q  110 ttgacaaagtgtataattgataaatcataccctcaaaataccaaaa 155  Q
    ||||||||   ||||||||||||||| || ||| ||||||||||||    
T  1770248 ttgacaaatgatataattgataaatcgtatccttaaaataccaaaa 1770293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 33659834 - 33659686
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaa--attttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    ||||||||||||||  |||||||||||||||||  | || |||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  33659834 attttgtttaaattgtaagataacaagaaacaagcaattagtttaaaaaaacaaacttcagtttttcaaatatataatattaattagttttattgaaaaa 33659735  T
Q  99 tattagaataattgacaaagtgtataattgataaatcataccctcaaaa 147  Q
     || ||| |||||||||||   ||||||||| |||| ||||||| ||||    
T  33659734 gataagagtaattgacaaatgatataattgacaaattatacccttaaaa 33659686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 32113373 - 32113482
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcatacc-ctcaaaataccaaaacaa 158  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||  ||||||||| ||||||||||  | |||||||||||||||    
T  32113373 ttttccaaatatataacattaattagttttattgaaaaatataagaataattgataaaggatataattgacaaatcataccattaaaaataccaaaacaa 32113472  T
Q  159 catttaaata 168  Q
    || |||||||    
T  32113473 cacttaaata 32113482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 158078 - 158210
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||| || ||| |||||  ||||| ||||||||    
T  158078 aaacaaactttgtttaaaaaaacaaattttagttttccaaatatataaaattaattagttttattgaaaaagataagagtaatttgcaaagggtataatt 158177  T
Q  128 gataaatcataccctcaaaataccaaaacaaca 160  Q
    || ||||| || ||| ||||||| || ||||||    
T  158178 gacaaatcgtatccttaaaatactaacacaaca 158210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 4316777 - 4316654
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcata-ccctcaaaata 149  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| || ||| |||||||||||   ||||||||| |||||| | || | ||||||    
T  4316777 aaactttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaaagatataattgacaaatcacatccttaaaaata 4316678  T
Q  150 ccaaaacaacatttaaataggaac 173  Q
    ||||||| ||| ||||||||||||    
T  4316677 ccaaaacgacagttaaataggaac 4316654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13140849 - 13141002
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaa-acaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaat 99  Q
    ||||||||||||||||| ||||| || ||| | | |||||||||| | |||||| || ||||||||||||| ||| |||| |||||||||||||||||||    
T  13140849 attttgtttaaatttgaggataataaaaaa-atactttgtttaaagaaaacaaatttcagtttttcaaatagataacatttattagttttattgaaaaat 13140947  T
Q  100 attagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaa 155  Q
    | |||| |||||||  ||  ||||||||||||||| ||||||| ||||||||||||    
T  13140948 a-tagagtaattgaagaaaggtataattgataaattatacccttaaaataccaaaa 13141002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 7486303 - 7486376
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatat 101  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7486303 aaacaaattttgtttaaaaaaacagactttagttttccaaatatataacattaattagttttattgaaaaatat 7486376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 408448 - 408545
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaaca--acaaactttagtttttcaaatatatagcattaattagttttattgaaaaa 98  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||| |  |||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  408448 attttgtttaa--ttgaagataacaaaaaacatattttgtttaaaaaataacaaactttaattttttaaatatatagtattaattagttttattgaaaaa 408545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 33659630 - 33659532
Alignment:
Q  58 agtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcata-ccctcaaaataccaaaa 155  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||| ||||| | ||| ||||||||||| |||||||| || | ||||||||||||    
T  33659630 agttttccaaatatataacattaattagttttattgaaaaatataagagtaattaataaattgtataattgacaaatcatatccttaaaaataccaaaa 33659532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 2218312 - 2218173
Alignment:
Q  22 aacaagaaacaaattttgtttaaaaca-acaaactttagtttttcaaatatatagcattaattagttttattga--aaaatattagaataattgacaaag 118  Q
    ||||| ||||||| |||||||||||   | ||||||||||||| |||||| ||| |||||||||||||||||||  |||| || ||| ||||||| ||||    
T  2218312 aacaaaaaacaaactttgtttaaaaattaaaaactttagtttt-caaatagatatcattaattagttttattgaaaaaaaaataagagtaattgagaaag 2218214  T
Q  119 tgtataattgataaatcataccctcaaaataccaaaacaac 159  Q
     ||| |  ||| |||||||||||| ||||||||||||||||    
T  2218213 agtaaatgtgagaaatcatacccttaaaataccaaaacaac 2218173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 12411728 - 12411667
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattg 112  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  12411728 aaactttagtttttcaaatatatagttataattagttttattgaaaaatataagaataattg 12411667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 12423788 - 12423727
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattg 112  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  12423788 aaactttagtttttcaaatatatagttataattagttttattgaaaaatataagaataattg 12423727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29882161 - 29882294
Alignment:
Q  37 ttgtttaaaac-aacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatc 135  Q
    ||||||||||| |||||| || ||||||||||||||||| |||| |||||||||||| ||||| || ||| || |||| |||| |||||| | | |||||    
T  29882161 ttgtttaaaactaacaaagttaagtttttcaaatatataacattgattagttttattcaaaaagataagagtagttgagaaagggtataagtaacaaatc 29882260  T
Q  136 ataccctcaaaataccaaaacaacatttaaatag 169  Q
    ||| ||| |||||| |||||| ||  ||||||||    
T  29882261 atatccttaaaataacaaaacgacggttaaatag 29882294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 37360425 - 37360292
Alignment:
Q  43 aaaacaacaaactttagtttttc-aaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccc 141  Q
    |||| |||||||||||||||||  ||||| | | ||||||||||||||| |||||||||| ||| ||||||| |||| ||| || | | |||||||| |     
T  37360425 aaaataacaaactttagtttttttaaatagacaacattaattagttttagtgaaaaatataagagtaattgagaaagggtacaaataacaaatcatatct 37360326  T
Q  142 tcaaaataccaaaacaacatttaaataggaacga 175  Q
    | |||||||| |||||||| ||||||| ||||||    
T  37360325 ttaaaatacctaaacaacagttaaatatgaacga 37360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29408726 - 29408778
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaa 53  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  29408726 attttgtttaaatttgaagataacaagaaacaagttttgtttaaaaaaacaaa 29408778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 13386512 - 13386399
Alignment:
Q  41 ttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcatacc 140  Q
    |||||| || |||||||||||||||| ||| || ||||||||||| |||||||||||| || ||| ||||||| ||| ||||||||||| ||||  || |    
T  13386512 ttaaaaaaataaactttagtttttcagatacatggcattaattag-tttattgaaaaaaataagagtaattgagaaaatgtataattgacaaattgtatc 13386414  T
Q  141 ctcaaaataccaaaa 155  Q
    || ||||||| ||||    
T  13386413 cttaaaatactaaaa 13386399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25965811 - 25965860
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttg-tttaaaacaa 49  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25965811 attttgtttaaatttgaagataacaagaaacaaattttgttttaaaacaa 25965860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27746623 - 27746582
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27746623 attttgtttaaatttgaagataacaagaaacaaattttgttt 27746582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 41117496 - 41117387
Alignment:
Q  60 tttttcaaatatatagcattaattagttttattgaaaaata-ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaa 158  Q
    ||||||||||| |||| |||||||||||||||||||||||| | ||| ||||||| ||||| ||||||||| |||| |||| || || ||| |||||  |    
T  41117496 tttttcaaatagatagtattaattagttttattgaaaaatagtaagagtaattgagaaagtctataattgacaaattatacacttaagatatcaaaatga 41117397  T
Q  159 catttaaata 168  Q
    || |||||||    
T  41117396 caattaaata 41117387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 29408784 - 29408867
Alignment:
Q  36 tttgtttaaaacaa--caaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaa 117  Q
    ||||||||||||||  |||||||||||||| |||||| ||| ||||||||| ||||||||||||| || | | |||||||||||    
T  29408784 tttgtttaaaacaaaacaaactttagttttgcaaatagataacattaattacttttattgaaaaagataaaagtaattgacaaa 29408867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 5783567 - 5783613
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5783567 ttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaa 5783613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7486251 - 7486300
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttg-tttaaaacaa 49  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  7486251 attttgtttaaatttgaagataacaagaaacaaatattgctttaaaacaa 7486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 29408896 - 29408953
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
    ||||||||| ||| || ||||||||||||||||||||| |||||||| ||||||||||    
T  29408896 ttaaataggtacggaaaattcaccctaaaaagacacttgaaaaggaatggagggagta 29408953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34424710 - 34424751
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  34424710 attttgtttaaatttgaagataacaaaaaacaaattttgttt 34424751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 42872273 - 42872389
Alignment:
Q  61 ttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccctcaaaa-taccaaaacaac 159  Q
    |||||||||||||| |||||||||| |||||| ||||| || ||| |||||||||||  |||||||||| ||||  ||| || |||| ||||||||| ||    
T  42872273 ttttcaaatatataacattaattag-tttattaaaaaaaataagagtaattgacaaaaggtataattgacaaattttactcttaaaattaccaaaacgac 42872371  T
Q  160 atttaaataggaacgaaa 177  Q
    | |||||||  |||||||    
T  42872372 acttaaataaaaacgaaa 42872389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 37814610 - 37814534
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattg 112  Q
    ||||||||||| | | ||||||||||||| ||||| |||| ||| |||||||||||||||||| || ||| ||||||    
T  37814610 tttgtttaaaaaagcgaactttagttttttaaatagatagaatttattagttttattgaaaaagataagagtaattg 37814534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 158025 - 158066
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  158025 attttgtttaaatttgaaggtaacaagaaacaaactttgttt 158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1397608 - 1397567
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  1397608 attttgtttaaatttaaagataataagaaacaaattttgttt 1397567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11073889 - 11073934
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  11073889 attttgtttaaatttgaaaataacaagaaacaaactttatttaaaa 11073934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12411806 - 12411765
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  12411806 attttgtttaaatttgaagataagatgaaacaaattttgttt 12411765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12423866 - 12423825
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  12423866 attttgtttaaatttgaagataagatgaaacaaattttgttt 12423825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 42756937 - 42756905
Alignment:
Q  10 aaatttgaagataacaagaaacaaattttgttt 42  Q
    |||||||||||||||||||||||||||||||||    
T  42756937 aaatttgaagataacaagaaacaaattttgttt 42756905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Complemental strand, 32674217 - 32674187
Alignment:
Q  193 gacacttaaaaaggaacggagggagtactat 223  Q
    |||||||||||||||||||||||||||||||    
T  32674217 gacacttaaaaaggaacggagggagtactat 32674187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 33024293 - 33024255
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaa 81  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  33024293 aaaaaaacaaactttagtttttcaaatatatagtattaa 33024255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4316843 - 4316802
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||| ||||||||||| |||||| |||||||    
T  4316843 attttgtttaaatttaaagataacaaggaacaaactttgttt 4316802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4959316 - 4959349
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  4959316 attttatttaaatttgaagataacaagaaacaaa 4959349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 6674513 - 6674622
Alignment:
Q  65 caaatatatagcattaattagttttattgaaaaatatta-----gaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaac 159  Q
    |||||||||||||||||||||||||| ||||||  | ||     || ||||||| |||   ||||||| | ||||  ||||||||||||| |||||||||    
T  6674513 caaatatatagcattaattagttttaatgaaaatgagtaagtgtgagtaattgagaaatgttataattaacaaattctaccctcaaaatatcaaaacaac 6674612  T
Q  160 atttaaatag 169  Q
    | ||||||||    
T  6674613 aattaaatag 6674622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 31741960 - 31741919
Alignment:
Q  48 aacaaactttagtttttcaaatatatagcattaattagtttt 89  Q
    ||||||||| | ||||||||||||||| ||||||||||||||    
T  31741960 aacaaacttgaatttttcaaatatataacattaattagtttt 31741919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 150215 - 150258
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaattttgtttaaaa 46  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||    
T  150215 ttttgtttaaatt-gaagataacaagaaataaactttgtttaaaa 150258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 11222552 - 11222580
Alignment:
Q  192 agacacttaaaaaggaacggagggagtac 220  Q
    |||||||||||||||||||||||||||||    
T  11222552 agacacttaaaaaggaacggagggagtac 11222580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 31025172 - 31025208
Alignment:
Q  188 aaaaagacacttaaaaaggaacggagggagtactata 224  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  31025172 aaaatgacacttaaaaaggaacggagggagtaatata 31025208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 42872220 - 42872252
Alignment:
Q  2 ttttgtttaaatttgaagataacaagaaacaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  42872220 ttttgtttaaattttaagataacaagaaacaaa 42872252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 256873 - 256682
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    |||||||||||| ||||||||||||||||||||  | | ||||||| || ||||||||||||| |||||| ||| ||||||||||||||||||||||| |    
T  256873 attttgtttaaaattgaagataacaagaaacaacctatatttaaaaaaa-aaactttagttttccaaatagataacattaattagttttattgaaaaaga 256775  T
Q  101 ttagaataattgacaaagtgtataattgataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaag 193  Q
    | |||  ||||||||||  |||||||||| ||||  ||| || ||||||||||||  ||| |||||||||||||||| | |||||||||||||    
T  256774 taagagaaattgacaaatggtataattgacaaatggtactcttaaaataccaaaaagacagttaaataggaacgaaaaaatcaccctaaaaag 256682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 215
Target Start/End: Original strand, 272361 - 272548
Alignment:
Q  28 aaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataatt 127  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||| ||  ||||||||| ||  |||||||    
T  272361 aaacaaactttgtttaaaaaaacaaactttaatttttcaaatatgtagtattcgttagttttattgaaaaatataagtgtaattgacagaggttataatt 272460  T
Q  128 gataaatcataccctcaaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggaggg 215  Q
    |||||||  |||| | |||||| |||||| ||| |||||||||||||||| |||||   |||||| ||||||||||||||| ||||||    
T  272461 gataaattgtaccattaaaatatcaaaacgacagttaaataggaacgaaaaattcattttaaaaatacacttaaaaaggaatggaggg 272548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 272310 - 272349
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgttt 42  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  272310 tttgtttaaatttgaagataataagaaacaaattttgttt 272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 46537 - 46650
Alignment:
Q  1 attttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaata 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| |||| |||||||||||||||||||| |||||||||||| ||    
T  46537 attttgtttaaatttgaagatgacaagaaacaaattttgttttaaa--acaaactttaatttt-caaatatatagcattaattaattttattgaaaatta 46633  T
Q  101 ttagaataattgacaaa 117  Q
    | |||||||||||||||    
T  46634 taagaataattgacaaa 46650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 15006 - 14831
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||  || ||  |||||||||||  |||||||||| ||||||||||||    
T  15006 aaaaaaactaactttagttttccaaatatataacattaattagttttattgaaaag-atgagggtaattgacaaaaggtataattgacaaatcataccct 14908  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     ||||||||||||| ||| ||||||| |||||  | || | | ||  ||  ||||||||||| ||||||||||||||    
T  14907 taaaataccaaaacgacagttaaatatgaacgttaaatccgcactcgaacaacacttaaaaatgaacggagggagta 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 15241 - 15317
Alignment:
Q  36 tttgtttaaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaa 116  Q
    ||||| ||||| |||||||||  |||||||||||||    ||||||||||||||||||||||| || ||| || |||||||    
T  15241 tttgtataaaaaaacaaacttatgtttttcaaatat----cattaattagttttattgaaaaaaataagagtagttgacaa 15317  T

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Target: scaffold0188 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 6399 - 6519
Alignment:
Q  51 aaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaa-taattgacaaagtgtataattgataaatcataccctcaaaata 149  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||||| || |||| ||||||||||||  ||||||||||||||||||| || ||||||    
T  6399 aaactttagttttccaaatatataacaataattaattttattgaaaaacat-agaagtaattgacaaaggatataattgataaatcatacacttaaaata 6497  T
Q  150 ccaaaacaacatttaaatagga 171  Q
    ||||||| ||| ||||||||||    
T  6498 ccaaaacgacagttaaatagga 6519  T

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Target: scaffold1327 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 959 - 784
Alignment:
Q  43 aaaacaacaaactttagtttttcaaatatatagcattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 142  Q
    |||| ||||||||||| |||| ||| || ||||||| ||||||||| ||||||||| || | | ||||||| |||  |||||||||| ||||| |||| |    
T  959 aaaaaaacaaactttaattttccaactagatagcatcaattagtttcattgaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtacctt 860  T
Q  143 caaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagta 219  Q
     |||||| |||||    | |||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||    
T  859 taaaatatcaaaaaggaagttaaataggaacgaaa-aatcaccctaaaaagacacttaaaaaagaatggagggagta 784  T

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Target: scaffold0012 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 202309 - 202233
Alignment:
Q  144 aaaataccaaaacaacatttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaacggagggagtac 220  Q
    ||||||||||||  ||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  202309 aaaataccaaaaagacagttgaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggagggagtac 202233  T

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Target: scaffold1801 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1801
Description:

Target: scaffold1801; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 1323 - 1236
Alignment:
Q  3 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaacaa-caaactttagtttttcaaatatatagcattaattagtttt 89  Q
    |||||| |||||| |||||| ||||||||||| ||||||||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  1323 tttgttcaaatttaaagatatcaagaaacaaactttgtttaaaaaaaacaaactttagttttccaaataaatagcattaattagtttt 1236  T

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Target: scaffold0159 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 37030 - 37076
Alignment:
Q  162 ttaaataggaacgaaatattcaccctaaaaagacacttaaaaaggaa 208  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  37030 ttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaa 37076  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 195968 - 196005
Alignment:
Q  188 aaaaagacacttaaaaaggaacggagggagtactatat 225  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  195968 aaaatgacacttaaaaaggaacggagggagtaatatat 196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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