View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10722_high_37 (Length: 241)

Name: NF10722_high_37
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10722_high_37
NF10722_high_37
[»] chr6 (1 HSPs)
chr6 (109-150)||(27974601-27974642)


Alignment Details
Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 27974642 - 27974601
Alignment:
109 gtgagtcaatacaaaatttcagcatgaagttttagtctcttc 150  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
27974642 gtgagtaaatacaaaatttcagcatgaagtttcagtctcttc 27974601  T

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