View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_high_39 (Length: 240)
Name: NF10722_high_39
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_high_39 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 41761028 - 41761251
Alignment:
| Q |
1 |
taggaaaaggaaaaattattagtaattagagtgccattgataatcataactcacctcatttgaggtaacaaaatcatattcttatgactgagttcacaca |
100 |
Q |
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| T |
41761028 |
taggaaaaggaaaaattattagtaattagagtgccattgataatcataactcacctcatttgaggtaacaaaatcatattcttatgactgagttcacaca |
41761127 |
T |
|
| Q |
101 |
tcatggatatgaaccaacttaccaagtaattttgagccaattatcttaagtatttgattacttttttggtgacactctaagcatttgatttgatcactat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41761128 |
tcatggatatgaaccaacttaccaagtaattttgagccaattatcttaagtatttgattacttttttggtgacactctaagcatttgatttgatcactat |
41761227 |
T |
|
| Q |
201 |
gatattgaagtaaacaatactaat |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
41761228 |
gatattgaagtaaacaatactaat |
41761251 |
T |
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