View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_high_48 (Length: 229)
Name: NF10722_high_48
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_high_48 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 471569 - 471357
Alignment:
| Q |
1 |
tggttggaaccttccaaatcatcttcaacatttccatcaacaatcaaaggtttaatctttttgtacttgatccaaaagcaaccaatacacaaaaccattc |
100 |
Q |
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| T |
471569 |
tggttggaaccttccaaatcatcttcaacatttccatcagcaatcaaaggtttaatctttttgtacttgatccaaaagcaaccaagacacaaaaccattc |
471470 |
T |
|
| Q |
101 |
tatccacagactgaatcaagaacaaaactatgcagaaatttgaaagatattgaattgttgatgcaatataatcaactctaaacctcaaccaactaacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
471469 |
tatccacagactgaatcaagaacaaaactatgcagaaatttgaaagatattgaattgttgatgcaatataatcaactctaaacctcaaccaactaacata |
471370 |
T |
|
| Q |
201 |
aacctcatgaaac |
213 |
Q |
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||||||||||||| |
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| T |
471369 |
aacctcatgaaac |
471357 |
T |
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