View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10722_high_52 (Length: 207)
Name: NF10722_high_52
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_high_52 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 34883086 - 34883266
Alignment:
| Q |
9 |
agaagcagagatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcgtcgaggagcattcttaaatgtcttgtttaataga |
108 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34883086 |
agaagcagacatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcgtcgaggagcattcttaaatgtcttgtttaataga |
34883185 |
T |
|
| Q |
109 |
gaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactggcacaataacaggacataactggtaacctt |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34883186 |
gaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactcgcacaataacaggacataactggtaacctt |
34883266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University