View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_low_14 (Length: 338)
Name: NF10722_low_14
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 1395659 - 1395974
Alignment:
| Q |
8 |
tagcataggtgcatgatttttgtgttatcccaacgctggagcaacgtcttcttgacggcagattttcgtctttacaaattgcaccgatggggggaaacat |
107 |
Q |
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| T |
1395659 |
tagcagaggtgcatgatttttgtgttatcccaacgctggagcaacgtcttcttgacggcagactttcgtctttacgaattgcaccgatgggg-gaaacat |
1395757 |
T |
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| Q |
108 |
gtgttcatgtattaataatgaagcaaaataattcttcagttattttttcgttgcgtttgaagattagcatccacaatttgttaaattaaataggtactta |
207 |
Q |
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| T |
1395758 |
gtgttcatgtattaataatgaagcaaaataattcttcagttattttttcgttgcgtttgaagattagcatccacaatttgttaaattaaataggtactta |
1395857 |
T |
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| Q |
208 |
tggctccgggtttcaggcgtccctttgcatgcttggacttctgaattcttcaacaaggtgttgttagctaagggtacttttttgagaatggatcttcaca |
307 |
Q |
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| T |
1395858 |
tggctccgggtttcaggcgtccctttgcatgcttggacttctgaattcttcaacaaggtgttgttagctaagggtacttttttgagaatggatcttcaca |
1395957 |
T |
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| Q |
308 |
tgcatggataataaaac |
324 |
Q |
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| T |
1395958 |
tgcatggataataaaac |
1395974 |
T |
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