View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_low_24 (Length: 293)
Name: NF10722_low_24
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 50594471 - 50594208
Alignment:
| Q |
20 |
ggaagatgtatcaaatattaggaaactcataagaaacaagaggataaagaaaaccccggggagtagttcgattgaggtcaacaatgtggttcaagaattt |
119 |
Q |
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| T |
50594471 |
ggaagatgtatcaaatattaggaaactcataagaaacaagaggataaagaaaaccccggggagtagttcgattgaggtcaacaatgtggttcaagaattt |
50594372 |
T |
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| Q |
120 |
gtatcatctgatgactcaaagccattttcacaagaggtcttttggatcctagaaggactggctttaaatcaaactagaactaatgacttgatggaacctg |
219 |
Q |
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| T |
50594371 |
gtatcatctgatgactcaaagccattttcacaagaggtcttttggatcctagaagggctggctttaaatcaaactagaactaatgacttgatggaacctg |
50594272 |
T |
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| Q |
220 |
tagaggaagatgctgataaaagttcactgtaaactgttacttttcttgtgtacttcagcctttg |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50594271 |
tagaggaagatgctgataaaagttcactgtaaactgttacttttcttgtgtacttcagcctttg |
50594208 |
T |
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