View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_low_31 (Length: 255)
Name: NF10722_low_31
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 43672735 - 43672519
Alignment:
| Q |
20 |
gagcagagagtggcatagatggaattttagggaaccttttcaaaacttcattatcatccaaactcaacttctcactaccttcaacactaccccaaccagg |
119 |
Q |
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| T |
43672735 |
gagcagagagtggcatagatggaattttagggaaccttttcaaaacttcattatcatccaaactcaacttctcactaccttcaacactaccccaaccagg |
43672636 |
T |
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| Q |
120 |
actaagtgggtcccctacacctttcatcacgtgacctctctcaaacccatcacgccacgtgtcattctcatcattataaaccagaaccgctacagcaccg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
43672635 |
actaagtgggtcccctacacctttcatcacgtgacctctctcaaacccattacgccacgtgtcattctcatcattataaactagaaccgctacagcaccg |
43672536 |
T |
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| Q |
220 |
ttttcctcagccttttc |
236 |
Q |
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| T |
43672535 |
ttttcctcagccttttc |
43672519 |
T |
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