View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_low_51 (Length: 233)
Name: NF10722_low_51
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_low_51 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 30557296 - 30557489
Alignment:
| Q |
18 |
agcacattcctacgtcccaagtcaataccactagaccaatcaagtggatgtggttttagttaaacgttgttagggaagttggttagttagaactaactaa |
117 |
Q |
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| T |
30557296 |
agcacactcctacgtcccaagtcaataccaccagaccaaccaagtggatgtggttttagttaaacgttgttagggaagttggttagttagaactaactaa |
30557395 |
T |
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| Q |
118 |
cactgtaaagcacaaacactctacataaatgcgcaatgatttgaatcgaatcaaagtcttcgacaagaata-tctttttagaaaacttagataa |
210 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |
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| T |
30557396 |
caatgtaaagcacaaacactctacataaatgcgcaatgatttgaatcgaatcaaagtcttcgacaagaatattttttttagaaaacttaaataa |
30557489 |
T |
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