View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10722_low_53 (Length: 229)
Name: NF10722_low_53
Description: NF10722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10722_low_53 |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 34883062 - 34883266
Alignment:
| Q |
7 |
agaagcagagaaggatttgaaaccagaagcagacatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcgtcgaggagca |
106 |
Q |
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| T |
34883062 |
agaagcaatgaaggatttgaaaccagaagcagacatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcgtcgaggagca |
34883161 |
T |
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| Q |
107 |
ttcttaaatgtcttgtttaatagagaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactggcacaataacaggacataactggta |
206 |
Q |
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| T |
34883162 |
ttcttaaatgtcttgtttaatagagaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactcgcacaataacaggacataactggta |
34883261 |
T |
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| Q |
207 |
acctt |
211 |
Q |
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| T |
34883262 |
acctt |
34883266 |
T |
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