View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10724_7 (Length: 402)
Name: NF10724_7
Description: NF10724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10724_7 |
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Alignment Details
Target: chr5 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 15 - 400
Target Start/End: Original strand, 30388890 - 30389275
Alignment:
| Q |
15 |
aaccgtgctgacgtggatgaaaagttagttagaaacttcgcctggtgtttagttaacgcgttacgtgatgttcacgcgcgtggcgttgttcattgtgatg |
114 |
Q |
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| T |
30388890 |
aaccgtgctgacgtggatgaaaagttagttagaaacttcgcctggtgtttagttaacgcgttacgtgatgttcacgcgcgtggcgttgttcattgtgatg |
30388989 |
T |
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| Q |
115 |
ttaaaggaagaaacgttctcatcggtggttccgtcgctaagctagctgattttggttcagctatggaattttccggtggggaatgtgaagtaccacgtgg |
214 |
Q |
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| T |
30388990 |
ttaaaggaagaaacgttctcatcggtggttccgtcgctaagctagctgattttggttcagctatggaattttccggtggtgaatgtgaagtaccacgtgg |
30389089 |
T |
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| Q |
215 |
aagtccgatgtggatggcaccggaggttgttcgccgggagtatcaaggaccggagtctgatgtctggtcattaggatgtactgtgattgagattttcacc |
314 |
Q |
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| T |
30389090 |
aagtccgatgtggatggcgccggaggttgttcgccgggagtatcaaggaccggagtctgatgtctggtcattaggatgtactgtaattgagattttcacc |
30389189 |
T |
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| Q |
315 |
ggaaaatcgccgtgggaggatcggggattcgagacactgagtcgaattggattttccgatgaggtaccggagtttccgagcggttt |
400 |
Q |
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| T |
30389190 |
ggaaaatcaccgtgggaggatcggggattcgagacgttgagtcgaattggattttccgatgagttaccggagtttccaagcggttt |
30389275 |
T |
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