View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10725_low_33 (Length: 206)
Name: NF10725_low_33
Description: NF10725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10725_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 41636908 - 41637024
Alignment:
| Q |
37 |
ggacatcatttacccaaccgacatcccaccttcttacattctcattcatttctcatctcaattaagtcatttcatcttaatgtttcaagttcgattgtca |
136 |
Q |
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| T |
41636908 |
ggacatcatttacccaaccgac--cccaccttcttacattctcattcatttctcgtctcaattaagtcattttatcttaatgtttcaagttcgattgtaa |
41637005 |
T |
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| Q |
137 |
aaataaaaagataaggtta |
155 |
Q |
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||||||||||||||||||| |
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| T |
41637006 |
aaataaaaagataaggtta |
41637024 |
T |
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