View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10726_high_4 (Length: 229)
Name: NF10726_high_4
Description: NF10726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10726_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 5468559 - 5468339
Alignment:
| Q |
7 |
tcttcctcgtatgtcgatgcaccttttttcacacctatggtattatccatatccatacccacacctttaatatcctcgtataccctttccttaatcaact |
106 |
Q |
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| T |
5468559 |
tcttcctcgtatgtccatgcaccttttttcacgcctatggtattatccatatccatacccacacctttaatatcctcgtataccctttccttaatcaact |
5468460 |
T |
|
| Q |
107 |
tcatacacaa----nnnnnnnnnnnnnggcatggtgtttcgtgtgtatcacacacacttacacccacat-nnnnnnngaacaaatattaataatttaaca |
201 |
Q |
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||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
5468459 |
tcatatacaaatatatatatatatataggcatggtgtttcgtgtgtatcacacacacttacacccacataaaaaaaagaacaaatattaataatttaaca |
5468360 |
T |
|
| Q |
202 |
atctacattcactttcttttg |
222 |
Q |
| |
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||||| ||||||||||||||| |
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| T |
5468359 |
atctaaattcactttcttttg |
5468339 |
T |
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