View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10727_low_26 (Length: 229)

Name: NF10727_low_26
Description: NF10727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10727_low_26
NF10727_low_26
[»] chr7 (51 HSPs)
chr7 (1-190)||(2825151-2825340)
chr7 (39-106)||(20553102-20553169)
chr7 (33-106)||(38010707-38010780)
chr7 (33-173)||(48157052-48157197)
chr7 (40-106)||(24363605-24363671)
chr7 (128-187)||(8427106-8427165)
chr7 (117-185)||(33871323-33871391)
chr7 (46-179)||(34035923-34036061)
chr7 (33-92)||(3610758-3610817)
chr7 (39-105)||(39967919-39967985)
chr7 (117-179)||(41040247-41040309)
chr7 (114-187)||(3836601-3836674)
chr7 (39-92)||(20881654-20881707)
chr7 (39-92)||(40530427-40530480)
chr7 (116-180)||(529443-529507)
chr7 (33-93)||(1083795-1083855)
chr7 (42-106)||(9423598-9423662)
chr7 (67-151)||(28128354-28128438)
chr7 (42-94)||(39505958-39506010)
chr7 (40-100)||(44821959-44822019)
chr7 (39-98)||(514766-514825)
chr7 (137-184)||(3019885-3019932)
chr7 (40-107)||(4966156-4966223)
chr7 (35-94)||(23721501-23721560)
chr7 (56-107)||(39280985-39281036)
chr7 (40-106)||(3468614-3468680)
chr7 (40-106)||(18749821-18749887)
chr7 (114-184)||(21247579-21247649)
chr7 (42-100)||(34754820-34754877)
chr7 (40-90)||(39334193-39334243)
chr7 (40-106)||(39345471-39345537)
chr7 (36-106)||(47559605-47559675)
chr7 (51-100)||(8690408-8690457)
chr7 (147-188)||(9210933-9210974)
chr7 (47-92)||(22283762-22283807)
chr7 (114-179)||(30748960-30749025)
chr7 (114-171)||(34744108-34744164)
chr7 (40-101)||(39360023-39360084)
chr7 (33-106)||(39907796-39907869)
chr7 (33-106)||(44151484-44151557)
chr7 (33-102)||(44241852-44241921)
chr7 (114-151)||(48131416-48131453)
chr7 (129-173)||(8094400-8094444)
chr7 (39-103)||(19022592-19022656)
chr7 (33-93)||(21453287-21453347)
chr7 (46-86)||(33552874-33552914)
chr7 (39-103)||(33601417-33601480)
chr7 (39-103)||(36484042-36484106)
chr7 (56-92)||(40428571-40428607)
chr7 (56-100)||(44995158-44995202)
chr7 (40-92)||(47130803-47130855)
[»] chr5 (63 HSPs)
chr5 (33-173)||(2568651-2568796)
chr5 (43-106)||(32059363-32059426)
chr5 (39-103)||(33533546-33533610)
chr5 (33-100)||(12425564-12425631)
chr5 (34-180)||(12459926-12460077)
chr5 (47-106)||(36638754-36638813)
chr5 (40-106)||(41957455-41957521)
chr5 (41-173)||(17258815-17258952)
chr5 (33-106)||(37588364-37588437)
chr5 (33-94)||(42181108-42181169)
chr5 (41-105)||(4014429-4014493)
chr5 (39-107)||(15402832-15402900)
chr5 (50-173)||(38104789-38104917)
chr5 (33-105)||(39105457-39105529)
chr5 (33-100)||(18704046-18704113)
chr5 (33-92)||(28586784-28586843)
chr5 (33-175)||(32172646-32172793)
chr5 (40-171)||(7907881-7908018)
chr5 (114-180)||(11104984-11105050)
chr5 (40-106)||(18543201-18543266)
chr5 (42-92)||(40205092-40205142)
chr5 (40-106)||(40534199-40534265)
chr5 (33-102)||(14961925-14961994)
chr5 (33-106)||(15003518-15003591)
chr5 (39-100)||(16889734-16889795)
chr5 (39-92)||(17368675-17368728)
chr5 (114-179)||(32849257-32849322)
chr5 (33-106)||(37526203-37526276)
chr5 (73-180)||(499656-499768)
chr5 (33-93)||(31030147-31030207)
chr5 (46-106)||(37611219-37611279)
chr5 (46-106)||(37787949-37788009)
chr5 (40-103)||(3237093-3237156)
chr5 (33-104)||(6587113-6587184)
chr5 (129-184)||(7550439-7550494)
chr5 (114-173)||(15015923-15015981)
chr5 (39-106)||(15074753-15074820)
chr5 (34-106)||(19138721-19138795)
chr5 (33-92)||(34975357-34975416)
chr5 (138-173)||(35036912-35036947)
chr5 (113-180)||(36796632-36796699)
chr5 (114-177)||(41112826-41112889)
chr5 (114-173)||(42646970-42647028)
chr5 (33-107)||(2880550-2880624)
chr5 (47-101)||(7319017-7319071)
chr5 (39-105)||(7984968-7985034)
chr5 (33-99)||(10272442-10272508)
chr5 (40-106)||(11615501-11615567)
chr5 (33-107)||(15308996-15309070)
chr5 (56-106)||(28409369-28409419)
chr5 (42-92)||(36318776-36318826)
chr5 (33-91)||(41016172-41016230)
chr5 (60-106)||(42582516-42582562)
chr5 (33-106)||(4619700-4619773)
chr5 (40-105)||(14182386-14182450)
chr5 (118-179)||(38033953-38034014)
chr5 (142-186)||(6392574-6392618)
chr5 (66-106)||(10280602-10280642)
chr5 (136-180)||(10798349-10798393)
chr5 (38-106)||(17827522-17827590)
chr5 (47-91)||(36774726-36774770)
chr5 (40-100)||(40590758-40590818)
chr5 (39-91)||(43300877-43300929)
[»] chr8 (56 HSPs)
chr8 (40-104)||(8060669-8060733)
chr8 (33-106)||(30389092-30389165)
chr8 (49-151)||(42215044-42215143)
chr8 (40-101)||(30277254-30277315)
chr8 (114-173)||(11376782-11376841)
chr8 (42-92)||(29973153-29973203)
chr8 (40-105)||(9956819-9956884)
chr8 (39-92)||(11183544-11183597)
chr8 (33-94)||(30013211-30013272)
chr8 (46-106)||(2458570-2458630)
chr8 (33-101)||(8062322-8062390)
chr8 (39-103)||(27028830-27028894)
chr8 (33-101)||(31862486-31862554)
chr8 (114-173)||(2487940-2487999)
chr8 (117-180)||(4560584-4560647)
chr8 (57-171)||(24326050-24326167)
chr8 (39-173)||(43504750-43504889)
chr8 (40-106)||(5088852-5088918)
chr8 (114-180)||(10939454-10939520)
chr8 (34-92)||(14247242-14247300)
chr8 (33-107)||(28769342-28769416)
chr8 (34-92)||(29973075-29973133)
chr8 (60-106)||(41606907-41606953)
chr8 (39-100)||(4558797-4558858)
chr8 (33-106)||(31705078-31705151)
chr8 (114-178)||(778468-778532)
chr8 (129-173)||(1113204-1113248)
chr8 (114-166)||(4511107-4511159)
chr8 (39-173)||(7918713-7918844)
chr8 (47-106)||(20672757-20672816)
chr8 (42-85)||(26473777-26473820)
chr8 (43-106)||(38307665-38307728)
chr8 (67-105)||(3536950-3536988)
chr8 (40-106)||(5069697-5069763)
chr8 (124-174)||(5226604-5226654)
chr8 (40-106)||(11185221-11185287)
chr8 (33-103)||(29417711-29417781)
chr8 (56-106)||(44401577-44401627)
chr8 (114-183)||(2364382-2364451)
chr8 (41-106)||(2595001-2595066)
chr8 (39-92)||(7645977-7646030)
chr8 (47-100)||(8535780-8535833)
chr8 (39-100)||(11745662-11745723)
chr8 (49-94)||(36643909-36643954)
chr8 (35-92)||(39561559-39561616)
chr8 (60-100)||(6950342-6950382)
chr8 (46-106)||(12851182-12851242)
chr8 (136-180)||(18331815-18331859)
chr8 (33-85)||(18931323-18931375)
chr8 (33-101)||(27728030-27728098)
chr8 (39-83)||(30627929-30627973)
chr8 (67-103)||(30918140-30918176)
chr8 (33-108)||(34570446-34570522)
chr8 (33-105)||(41336650-41336722)
chr8 (49-105)||(42215311-42215367)
chr8 (47-99)||(44236834-44236886)
[»] chr2 (70 HSPs)
chr2 (33-180)||(11513891-11514041)
chr2 (33-106)||(22681189-22681262)
chr2 (34-106)||(29316779-29316851)
chr2 (47-180)||(8017441-8017579)
chr2 (114-175)||(29430837-29430898)
chr2 (39-103)||(16867738-16867802)
chr2 (38-105)||(9174813-9174880)
chr2 (129-180)||(37419592-37419643)
chr2 (41-187)||(40158719-40158870)
chr2 (61-179)||(43529784-43529907)
chr2 (33-173)||(18179172-18179317)
chr2 (33-105)||(29628748-29628820)
chr2 (128-180)||(43199928-43199980)
chr2 (39-106)||(1893285-1893352)
chr2 (117-180)||(22878180-22878243)
chr2 (46-101)||(35810802-35810857)
chr2 (33-100)||(39983335-39983402)
chr2 (114-173)||(41170689-41170748)
chr2 (40-106)||(1625900-1625966)
chr2 (47-105)||(35379021-35379079)
chr2 (33-107)||(35485910-35485984)
chr2 (72-173)||(39621983-39622089)
chr2 (33-111)||(42419990-42420068)
chr2 (33-107)||(43985006-43985080)
chr2 (47-108)||(6546994-6547055)
chr2 (33-106)||(10285853-10285926)
chr2 (36-105)||(26143645-26143714)
chr2 (40-105)||(40279197-40279262)
chr2 (49-105)||(7928304-7928360)
chr2 (124-172)||(17443541-17443589)
chr2 (54-106)||(41809249-41809301)
chr2 (33-100)||(6227744-6227811)
chr2 (39-106)||(33942149-33942216)
chr2 (46-101)||(35993389-35993444)
chr2 (40-102)||(5133772-5133834)
chr2 (40-106)||(10563562-10563628)
chr2 (39-85)||(10884546-10884592)
chr2 (40-102)||(11488277-11488339)
chr2 (114-184)||(26548532-26548602)
chr2 (33-91)||(35486382-35486440)
chr2 (40-106)||(38078414-38078480)
chr2 (38-104)||(41407603-41407668)
chr2 (33-99)||(42621386-42621452)
chr2 (46-92)||(45229517-45229563)
chr2 (47-92)||(3611233-3611278)
chr2 (114-151)||(5902503-5902540)
chr2 (33-94)||(7193865-7193926)
chr2 (49-106)||(9530732-9530789)
chr2 (39-92)||(30552662-30552715)
chr2 (33-106)||(33931574-33931647)
chr2 (72-105)||(35378537-35378570)
chr2 (134-179)||(35713286-35713331)
chr2 (128-173)||(37276837-37276882)
chr2 (49-106)||(41817177-41817234)
chr2 (51-100)||(42457959-42458008)
chr2 (41-106)||(43911003-43911068)
chr2 (49-106)||(44443330-44443387)
chr2 (44-92)||(3059292-3059340)
chr2 (56-92)||(5781685-5781721)
chr2 (128-180)||(15370248-15370300)
chr2 (117-173)||(25609878-25609934)
chr2 (33-105)||(28039337-28039409)
chr2 (40-92)||(28933824-28933876)
chr2 (114-178)||(31982378-31982442)
chr2 (40-92)||(32694212-32694264)
chr2 (117-169)||(34927045-34927097)
chr2 (41-105)||(40279268-40279332)
chr2 (41-105)||(40279338-40279402)
chr2 (39-103)||(41851534-41851598)
chr2 (33-101)||(43141864-43141932)
[»] chr1 (96 HSPs)
chr1 (49-180)||(10199333-10199469)
chr1 (39-106)||(25479580-25479647)
chr1 (33-103)||(7137005-7137075)
chr1 (33-106)||(23902071-23902144)
chr1 (40-102)||(15558217-15558279)
chr1 (55-104)||(47885039-47885088)
chr1 (40-100)||(12564509-12564569)
chr1 (33-107)||(6659507-6659581)
chr1 (33-107)||(14629969-14630043)
chr1 (33-103)||(34290229-34290299)
chr1 (49-106)||(6279408-6279465)
chr1 (33-173)||(31517672-31517817)
chr1 (33-106)||(35017569-35017642)
chr1 (33-94)||(49888760-49888821)
chr1 (33-105)||(6102147-6102219)
chr1 (114-186)||(18327065-18327137)
chr1 (33-105)||(38882917-38882988)
chr1 (41-101)||(47598430-47598490)
chr1 (33-92)||(7218092-7218151)
chr1 (43-106)||(15437966-15438029)
chr1 (41-180)||(17269251-17269395)
chr1 (47-106)||(28077073-28077132)
chr1 (33-104)||(35590898-35590969)
chr1 (33-103)||(37241828-37241899)
chr1 (60-99)||(37818459-37818498)
chr1 (39-106)||(39347971-39348038)
chr1 (40-86)||(5924055-5924101)
chr1 (34-92)||(8130430-8130488)
chr1 (39-101)||(26779934-26779996)
chr1 (44-106)||(31118047-31118109)
chr1 (42-92)||(34952217-34952267)
chr1 (47-105)||(51695500-51695558)
chr1 (33-106)||(3224416-3224489)
chr1 (58-107)||(15361058-15361107)
chr1 (124-173)||(21002244-21002293)
chr1 (33-106)||(30257676-30257749)
chr1 (41-106)||(32182272-32182337)
chr1 (40-105)||(38503470-38503535)
chr1 (40-97)||(49175619-49175676)
chr1 (33-97)||(3319945-3320009)
chr1 (124-180)||(3597206-3597262)
chr1 (114-178)||(4757417-4757481)
chr1 (67-180)||(6292520-6292637)
chr1 (119-179)||(12564425-12564485)
chr1 (33-93)||(26946464-26946524)
chr1 (33-105)||(27820342-27820414)
chr1 (42-106)||(28262623-28262687)
chr1 (40-92)||(33976686-33976738)
chr1 (39-107)||(35351038-35351106)
chr1 (34-106)||(37842359-37842431)
chr1 (33-100)||(4549223-4549290)
chr1 (128-187)||(9602572-9602631)
chr1 (39-106)||(10744300-10744367)
chr1 (137-180)||(28910089-28910132)
chr1 (49-92)||(30014096-30014139)
chr1 (117-172)||(32515374-32515429)
chr1 (47-86)||(35677484-35677523)
chr1 (118-161)||(40485717-40485760)
chr1 (40-91)||(51929794-51929845)
chr1 (39-105)||(219556-219622)
chr1 (40-106)||(7262522-7262588)
chr1 (114-180)||(14737651-14737717)
chr1 (33-99)||(25005808-25005874)
chr1 (40-106)||(27140478-27140544)
chr1 (134-184)||(28837274-28837324)
chr1 (33-103)||(45975683-45975753)
chr1 (43-81)||(50319273-50319311)
chr1 (33-106)||(3924617-3924690)
chr1 (123-180)||(4920694-4920751)
chr1 (138-187)||(5082928-5082977)
chr1 (33-106)||(12564878-12564951)
chr1 (124-173)||(15581343-15581392)
chr1 (40-85)||(22810653-22810698)
chr1 (118-179)||(23373239-23373300)
chr1 (123-180)||(24417660-24417717)
chr1 (56-105)||(27820201-27820250)
chr1 (134-179)||(29793624-29793669)
chr1 (137-190)||(32958739-32958792)
chr1 (134-171)||(37591529-37591566)
chr1 (33-102)||(42556639-42556708)
chr1 (118-171)||(44928125-44928178)
chr1 (42-106)||(3223670-3223733)
chr1 (39-103)||(3234022-3234086)
chr1 (33-101)||(5592694-5592762)
chr1 (128-180)||(6659773-6659825)
chr1 (142-186)||(10854414-10854458)
chr1 (39-103)||(12287199-12287263)
chr1 (114-178)||(12481582-12481646)
chr1 (40-92)||(15488954-15489006)
chr1 (137-173)||(28075806-28075842)
chr1 (33-106)||(28689456-28689531)
chr1 (59-107)||(33975589-33975637)
chr1 (39-86)||(39803915-39803963)
chr1 (33-93)||(40394903-40394962)
chr1 (72-104)||(48748321-48748353)
chr1 (40-92)||(49938747-49938799)
[»] chr4 (65 HSPs)
chr4 (47-186)||(18628472-18628606)
chr4 (41-107)||(29263371-29263437)
chr4 (33-106)||(6466050-6466123)
chr4 (33-106)||(7694014-7694087)
chr4 (33-106)||(35405940-35406013)
chr4 (118-179)||(50298598-50298659)
chr4 (39-106)||(24929492-24929559)
chr4 (118-180)||(1017111-1017173)
chr4 (40-106)||(26747406-26747472)
chr4 (34-146)||(1137706-1137823)
chr4 (39-173)||(17822797-17822936)
chr4 (33-143)||(49202638-49202754)
chr4 (42-106)||(8469381-8469445)
chr4 (40-92)||(11158375-11158427)
chr4 (40-92)||(11264301-11264353)
chr4 (33-140)||(42866061-42866173)
chr4 (33-101)||(49219132-49219200)
chr4 (56-107)||(5131253-5131304)
chr4 (33-92)||(30207589-30207648)
chr4 (33-100)||(36048526-36048593)
chr4 (33-91)||(42121481-42121539)
chr4 (33-90)||(2900333-2900390)
chr4 (33-106)||(8468941-8469014)
chr4 (56-101)||(28614817-28614862)
chr4 (47-92)||(29601026-29601071)
chr4 (114-187)||(40174637-40174709)
chr4 (114-179)||(51560215-51560280)
chr4 (114-162)||(22471353-22471401)
chr4 (131-187)||(32420976-32421032)
chr4 (79-179)||(42641424-42641524)
chr4 (47-107)||(53673661-53673721)
chr4 (42-106)||(55084485-55084549)
chr4 (44-107)||(17884072-17884135)
chr4 (56-103)||(41603418-41603465)
chr4 (134-173)||(46797113-46797152)
chr4 (40-106)||(10192284-10192349)
chr4 (33-107)||(20936232-20936306)
chr4 (119-173)||(21157852-21157906)
chr4 (72-106)||(43824315-43824349)
chr4 (129-179)||(50746069-50746119)
chr4 (46-84)||(51044506-51044544)
chr4 (33-91)||(53943599-53943657)
chr4 (134-171)||(1313236-1313273)
chr4 (114-179)||(8328045-8328110)
chr4 (33-82)||(18630673-18630722)
chr4 (56-101)||(19429725-19429770)
chr4 (33-106)||(20907340-20907413)
chr4 (74-107)||(22662250-22662283)
chr4 (39-92)||(24370971-24371024)
chr4 (47-100)||(29563414-29563467)
chr4 (47-92)||(31006025-31006070)
chr4 (138-179)||(47970399-47970440)
chr4 (56-92)||(2977995-2978031)
chr4 (47-79)||(8147899-8147931)
chr4 (33-89)||(8422860-8422916)
chr4 (44-92)||(18019976-18020024)
chr4 (139-183)||(23676930-23676974)
chr4 (119-179)||(23983909-23983969)
chr4 (114-186)||(24160448-24160520)
chr4 (47-103)||(24169270-24169326)
chr4 (65-105)||(31038872-31038912)
chr4 (33-101)||(35507466-35507534)
chr4 (40-96)||(52734803-52734859)
chr4 (39-103)||(53294121-53294185)
chr4 (39-103)||(55414427-55414491)
[»] chr3 (64 HSPs)
chr3 (37-106)||(33883754-33883823)
chr3 (33-106)||(22214663-22214736)
chr3 (65-173)||(41057179-41057293)
chr3 (39-106)||(45432943-45433010)
chr3 (117-179)||(36189711-36189773)
chr3 (40-105)||(21367667-21367732)
chr3 (33-106)||(24785198-24785271)
chr3 (43-100)||(39885541-39885598)
chr3 (72-179)||(26330249-26330361)
chr3 (33-101)||(38975913-38975981)
chr3 (33-92)||(14548739-14548798)
chr3 (47-106)||(37273141-37273200)
chr3 (40-103)||(41644452-41644515)
chr3 (49-92)||(44488892-44488935)
chr3 (45-187)||(49465583-49465730)
chr3 (40-106)||(237397-237463)
chr3 (40-106)||(1217804-1217870)
chr3 (47-101)||(12985354-12985408)
chr3 (129-187)||(22667497-22667555)
chr3 (129-187)||(22724136-22724194)
chr3 (40-106)||(36887504-36887570)
chr3 (47-101)||(38462288-38462342)
chr3 (40-106)||(39602214-39602280)
chr3 (33-87)||(42733960-42734014)
chr3 (47-101)||(44284089-44284143)
chr3 (40-179)||(45590664-45590795)
chr3 (33-87)||(51510216-51510270)
chr3 (114-187)||(20194951-20195024)
chr3 (119-180)||(25459555-25459616)
chr3 (33-106)||(43115049-43115122)
chr3 (40-101)||(43875465-43875526)
chr3 (33-101)||(23785248-23785316)
chr3 (114-178)||(28881686-28881749)
chr3 (49-180)||(45541580-45541716)
chr3 (39-103)||(53789468-53789532)
chr3 (129-180)||(20210853-20210904)
chr3 (126-173)||(21872227-21872274)
chr3 (33-84)||(22203423-22203474)
chr3 (33-92)||(24887301-24887360)
chr3 (124-179)||(30657375-30657430)
chr3 (116-187)||(31403440-31403511)
chr3 (114-173)||(50211814-50211873)
chr3 (47-101)||(2719475-2719529)
chr3 (114-180)||(18405756-18405821)
chr3 (40-106)||(20669172-20669238)
chr3 (40-106)||(36646386-36646452)
chr3 (40-106)||(52619003-52619069)
chr3 (42-87)||(21335677-21335722)
chr3 (40-93)||(25075066-25075119)
chr3 (40-105)||(34610811-34610876)
chr3 (36-101)||(34924547-34924612)
chr3 (73-106)||(38318993-38319026)
chr3 (33-70)||(42753599-42753636)
chr3 (40-92)||(1816583-1816635)
chr3 (39-87)||(18405854-18405902)
chr3 (41-85)||(24158528-24158572)
chr3 (39-103)||(25776116-25776180)
chr3 (39-103)||(28622006-28622070)
chr3 (39-83)||(30956653-30956697)
chr3 (39-83)||(30972465-30972509)
chr3 (49-101)||(34254817-34254869)
chr3 (39-103)||(39980728-39980792)
chr3 (59-103)||(40608388-40608432)
chr3 (39-91)||(44747427-44747479)
[»] chr6 (41 HSPs)
chr6 (33-107)||(4006707-4006781)
chr6 (45-99)||(7931800-7931854)
chr6 (33-100)||(281858-281925)
chr6 (33-106)||(2112193-2112266)
chr6 (46-106)||(7931730-7931790)
chr6 (33-105)||(13907578-13907650)
chr6 (33-92)||(2117396-2117455)
chr6 (40-106)||(8010357-8010423)
chr6 (40-106)||(20368184-20368250)
chr6 (47-96)||(33498626-33498675)
chr6 (42-106)||(4420645-4420709)
chr6 (41-111)||(33558543-33558615)
chr6 (104-187)||(769207-769290)
chr6 (33-92)||(1275142-1275201)
chr6 (47-106)||(6647394-6647453)
chr6 (33-92)||(9093574-9093633)
chr6 (33-92)||(19800454-19800513)
chr6 (114-173)||(26559171-26559230)
chr6 (124-171)||(33385618-33385665)
chr6 (122-173)||(35070399-35070450)
chr6 (39-93)||(837233-837287)
chr6 (124-186)||(3180988-3181050)
chr6 (72-106)||(6536979-6537013)
chr6 (40-106)||(8183145-8183211)
chr6 (40-94)||(25100043-25100097)
chr6 (56-94)||(29957938-29957976)
chr6 (40-102)||(34430469-34430531)
chr6 (33-106)||(415297-415370)
chr6 (39-92)||(835267-835320)
chr6 (33-70)||(2727896-2727933)
chr6 (134-187)||(12111066-12111119)
chr6 (33-106)||(17241256-17241329)
chr6 (41-106)||(34403856-34403921)
chr6 (46-90)||(2205610-2205654)
chr6 (33-101)||(3201956-3202024)
chr6 (40-92)||(9732476-9732528)
chr6 (111-163)||(10031808-10031860)
chr6 (39-103)||(14492301-14492365)
chr6 (70-106)||(18604616-18604652)
chr6 (33-97)||(31671087-31671151)
chr6 (33-65)||(34405104-34405136)
[»] scaffold0020 (1 HSPs)
scaffold0020 (40-173)||(159905-160043)
[»] scaffold0003 (1 HSPs)
scaffold0003 (43-101)||(306329-306387)
[»] scaffold0141 (1 HSPs)
scaffold0141 (128-187)||(9696-9755)
[»] scaffold0018 (1 HSPs)
scaffold0018 (33-92)||(178343-178402)
[»] scaffold0091 (1 HSPs)
scaffold0091 (124-174)||(6021-6071)
[»] scaffold0426 (1 HSPs)
scaffold0426 (114-179)||(4092-4156)
[»] scaffold0428 (1 HSPs)
scaffold0428 (124-172)||(3995-4043)
[»] scaffold0167 (1 HSPs)
scaffold0167 (39-87)||(17275-17323)
[»] scaffold0159 (1 HSPs)
scaffold0159 (56-92)||(27017-27053)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 2825340 - 2825151
Alignment:
Q  1 ttatgtataacctctttctttaacaaaataactataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2825340 ttatgtataacctctttctttaacaaaataactataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 2825241  T
Q  101 gaacataacatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatagttt 190  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2825240 gaacataagatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatagttt 2825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 20553102 - 20553169
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||||||| |||||||| || ||||||||||||| ||||||| |||||||||||||    
T  20553102 ctataagttgttttcacaagttatcctagtgagcttatggaaataatctgaaaacaacttatgaacat 20553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 38010707 - 38010780
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  38010707 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 38010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 48157197 - 48157052
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataaca----tggtttc-ataagttctt 127  Q
    ||||| |||||| ||||||||||||||||| |  |||| ||||||||||||||||||||| | |||||| ||||  ||    | ||||| ||||| |||     
T  48157197 tataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctc 48157098  T
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| |||||||||| |||||| || |||| ||||||||||||||    
T  48157097 ccaaacagtctcacaaatgcttaaatcagtaaataagctcaaataa 48157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 24363671 - 24363605
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| |||||||||| ||||  |||||||||||||||||||| |||||||| ||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacat 24363605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 8427106 - 8427165
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||| |||||||||||| ||||| | |||||||||||||||||||||||||| ||||||    
T  8427106 ccaaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaatag 8427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 33871323 - 33871391
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaat 185  Q
    |||||||||| ||||| ||| || |||||| |||| |||||||||||||||||| || |||||||||||    
T  33871323 cataagttctcccaaatagtttcgcaagtgtttatgtaagtagataagctcaaaaaagtcaatcaaaat 33871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 34035923 - 34036061
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa------cataacatggtttcataagttcttccaaagagtctc 139  Q
    ||||||||| |||||||| ||||||||||  | ||||||| |||||| ||||||||||      |||||  |  ||||||||||||||||||  ||||||    
T  34035923 ttgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctc 34036022  T
Q  140 acaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||| | | ||| | ||||||||||||||||||| |||||    
T  34036023 acaa-tacatatgtcagtagataagctcaaataagtcaat 34036061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 3610817 - 3610758
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||||||||||||  || |||||||||||| ||||| |||||||||||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 39967919 - 39967985
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||||| ||||||||  |||||||| ||| ||||||| |||||| | ||||||||||    
T  39967919 ctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaaca 39967985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 41040247 - 41040309
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||||| ||||| |||||| ||||||| | ||||||| ||||||||| |||||||||||||||    
T  41040247 cataagctcttctaaagagcctcacaaatacttatatcagtagataaactcaaataaatcaat 41040309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 3836674 - 3836601
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||||||| ||||| ||| |||||||||||||    |||||||||||||||||||  ||||| ||||||    
T  3836674 tttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaatag 3836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 20881707 - 20881654
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||| || ||||| || |||||||||| ||||||||||||||    
T  20881707 ctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 40530480 - 40530427
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||| | ||||||||||| |||||||||| ||||||| ||||||    
T  40530480 ctataagttgttttaataagctatcctaaagaacttatgaaaataagttgaaaa 40530427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 529443 - 529507
Alignment:
Q  116 tcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||| ||||| || |||||||||| ||||   ||||||||||||||||||| ||||||    
T  529443 tcataagttctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatc 529507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 1083855 - 1083795
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    |||||||||||||||||||||| | |||| |||  |||||||| | |||||||||||||||    
T  1083855 tataaactataagttgttttcataggctaccctgaagaacttacgtaaataagctgaaaat 1083795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 9423662 - 9423598
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| |||||| | |||||||||| |||| ||| | ||||||||||||||| |||||||||||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacat 9423598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 28128438 - 28128354
Alignment:
Q  67 gagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgcttat 151  Q
    ||||| |||||||||||||||||||| || | ||| ||||||  || ||||| ||||||| | ||| | ||||||||||||||||    
T  28128438 gagaatttatggaaataagctgaaaacaattcatgcacataagttgttttcacaagttctccaaaacaatctcacaagtgcttat 28128354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 39505958 - 39506010
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||||||||||| ||||||| || ||||  ||||||||||||||||||||||    
T  39505958 taagttgttttcataagctattctggagagtttatggaaataagctgaaaata 39506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 44821959 - 44822019
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||| |||||||| ||||||| || ||||||||||| ||||||| |||||| |||||||    
T  44821959 tataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 514766 - 514825
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactt 98  Q
    ||||||| |||||||| |||||||||| |||| ||| |  ||||||||||||||||||||    
T  514766 ctataagctgttttcataagctatcctggagagcttgtcaaaataagctgaaaataactt 514825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 3019885 - 3019932
Alignment:
Q  137 ctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaa 184  Q
    ||||||||| ||||||  ||||||||||||||||||| ||||||||||    
T  3019885 ctcacaagtacttatactagtagataagctcaaataagtcaatcaaaa 3019932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 4966156 - 4966223
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||| |||||||| |||| |||||  ||| ||||||||||||| ||||||| |||||||| |||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacata 4966223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 23721501 - 23721560
Alignment:
Q  35 taaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    |||||||||||||||||| | |||||||||| | |  |||||||||||||||||| ||||    
T  23721501 taaactataagttgtttttataagctatccttgtgcgcttatggaaataagctgagaata 23721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 39280985 - 39281036
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||| | |||||| ||||||||||||||||||| |||||||| |||||    
T  39280985 aagctatcttggagaacatatggaaataagctgaaaacaacttatggacata 39281036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 3468614 - 3468680
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| | |||||| || |||||||||||||||| |||||||||| || ||| |||||||| ||||    
T  3468614 tataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacat 3468680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 18749887 - 18749821
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| ||||||||   || |||||||||||||||||||||||   |||||||||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacat 18749821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 21247579 - 21247649
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaa 184  Q
    ||||||||| |||| |||| ||| ||||||||| ||||  | |||||||| ||||||||||| ||||||||    
T  21247579 tttcataagctcttgcaaacagtttcacaagtggttatgcaggtagataaactcaaataaataaatcaaaa 21247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34754877 - 34754820
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||||||||| || ||||||| |||| || |||||||||||||||||| |||||||    
T  34754877 taagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttat 34754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 39334193 - 39334243
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaa 90  Q
    |||||| |||||||| |||||||||| | || |||||||||||||||||||    
T  39334193 tataagctgttttcaaaagctatcctggcgagcttatggaaataagctgaa 39334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 39345471 - 39345537
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| ||||||||||   || ||||||||||||||||||||  |||||||| ||||    
T  39345471 tataagctgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacat 39345537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 47559675 - 47559605
Alignment:
Q  36 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||| |||||||| ||| |||  | ||||||||||| |||| ||| ||||| |||||||||||||    
T  47559675 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 47559605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 8690457 - 8690408
Alignment:
Q  51 ttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||| ||| |||||||||||||||||||||||||||  |||||| |||||    
T  8690457 ttcataagttatcctagagaacttatggaaataagccaaaaatagcttat 8690408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 9210933 - 9210974
Alignment:
Q  147 cttatataagtagataagctcaaataaatcaatcaaaatagt 188  Q
    ||||||| ||||||||||||||||||| |||||| |||||||    
T  9210933 cttatatcagtagataagctcaaataagtcaatccaaatagt 9210974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 22283807 - 22283762
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||| || | ||| ||||||||||||||||||||||||||||    
T  22283807 tgttttcataaaccatcttagagaacttatggaaataagctgaaaa 22283762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 30749025 - 30748960
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||||||||||||  |||| |||||||||   |||||| | ||||||||||||||||||| |||||    
T  30749025 tttcataagttctctcaaacagtctcacattggcttatgtcagtagataagctcaaataactcaat 30748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 34744108 - 34744164
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaat 171  Q
    |||||| |||||||||||| |||||||||| | ||||| | |||||||||||||||||    
T  34744108 tttcattagttcttccaaacagtctcacaaat-cttatgttagtagataagctcaaat 34744164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 39360023 - 39360084
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| |||||||| |||||||||| | || ||||| ||||||||||||||  ||||||||    
T  39360023 tataagatgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatg 39360084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 39907796 - 39907869
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||  |||||||| || ||||| ||||||||| ||| |||||||||||||| | || ||||||||    
T  39907796 tataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacat 39907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 44151557 - 44151484
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| || ||||| |  | | ||||||||||||||||||||| | |||||| ||||    
T  44151557 tataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacat 44151484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 44241852 - 44241921
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    ||||| |||||||||||||||| |||||||| |  | | ||||| |||||||||||||||| | ||||||    
T  44241852 tataacctataagttgttttcataagctatcttgaatagcttatagaaataagctgaaaatgatttatga 44241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 48131416 - 48131453
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttat 151  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  48131416 tttcataagttcttccaaacagtctcataagtgcttat 48131453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 8094400 - 8094444
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||| ||||||||||||||||||   |||||||||||||||||||    
T  8094400 caaatagtctcacaagtgcttatgctagtagataagctcaaataa 8094444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 19022656 - 19022592
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||| | |||||||  | ||||||||||| ||||||| |||| | ||||||||||    
T  19022656 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaa 19022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 21453287 - 21453347
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    ||||| ||||||  |||||||| ||||||||||||||| || ||| | |||||||||||||    
T  21453287 tataagctataaactgttttcataagctatcctagagagctaatgaagataagctgaaaat 21453347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 33552914 - 33552874
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagc 86  Q
    ||||||||| |||||||| ||||||||||||| ||||||||    
T  33552914 ttgttttcataagctatcttagagaacttatgaaaataagc 33552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 33601480 - 33601417
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||| | |||||||| ||||||||||||| |  ||||||||||| | ||||||||    
T  33601480 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 33601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 36484106 - 36484042
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||||||||| ||||||  ||| ||||| |||||| | |||||| | ||||||||    
T  36484106 ctataagttgttttcacaagttatcctgaagagcttatagaaatatgttgaaaacaccttatgaa 36484042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 40428571 - 40428607
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  40428571 aagctatcctaaagagcttatggaaataagctgaaaa 40428607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 44995202 - 44995158
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||||| | |||||||||| |||||||| ||||||||||||||    
T  44995202 aagctatcattgagaacttatagaaataagatgaaaataacttat 44995158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 47130855 - 47130803
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||| |||||||| | |||||||| || ||||||| ||||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaa 47130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 173
Target Start/End: Original strand, 2568651 - 2568796
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttctt 127  Q
    ||||| |||||||||||||||| |||||||| | |||| || ||| ||||||||| |||||||||||||||     |||||  || ||||||||||||||    
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttctt 2568750  T
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    | ||| |||||| |||||||||| |  |||||||||||||||||||    
T  2568751 ctaaacagtctctcaagtgcttacaccagtagataagctcaaataa 2568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 32059426 - 32059363
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  32059426 aagttcttttcataagctatcctagagaacttatcgaaataagctgaaaacaactcatgaacat 32059363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 33533610 - 33533546
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| ||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||||    
T  33533610 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 33533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 12425564 - 12425631
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||| ||||||| |||||| |||||||    
T  12425564 tataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 12460077 - 12459926
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttc 128  Q
    |||||||||||||||| ||||||||||||| |  ||| |||||| ||||||||  |||| ||| ||||||     |||||  || ||||||| ||||| |    
T  12460077 ataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcc 12459978  T
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||| ||||||||| |||||||| | || ||||||||  |||||| ||||||    
T  12459977 caaacagtctcacaggtgcttatgtcagcagataagccgaaataagtcaatc 12459926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 36638754 - 36638813
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||| | |||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacat 36638813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 41957521 - 41957455
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| |||||||||| ||||||||||| ||||||| |||||| |||||||| ||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacat 41957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 17258952 - 17258815
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatgg-----tttcataagttcttccaaagag 135  Q
    ||||| |||||||| || |||||||  ||| |||||| |||||||||||||| | |||||||||||  |||       ||||||| ||||| |||||||     
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaa 17258853  T
Q  136 tctcacaagtgcttatataagtagataagctcaaataa 173  Q
    | |||||||||||||| | ||| |||||||||||||||    
T  17258852 tgtcacaagtgcttatgttagttgataagctcaaataa 17258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 37588437 - 37588364
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| ||| ||| || |||| ||||||||||||||||||||| | ||||| |||||    
T  37588437 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 42181169 - 42181108
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||| ||||||||||||| |||||| ||||||||||| || | ||||||||||||||||||    
T  42181169 tataagctataagttgtttgcacaagttatcctagagagctcaaggaaataagctgaaaata 42181108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| |||||||| |||||||| | ||||||||||| |||||||||||||| | ||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 15402900 - 15402832
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||||||||||| || ||||  |||||||| ||| ||||| ||||||||| ||||||||||||||    
T  15402900 ctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacata 15402832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 38104917 - 38104789
Alignment:
Q  50 tttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga-----acataacatggtttcataagttcttccaaagagtctcacaag 144  Q
    ||||| |||||||| |||||| ||||||||||||||||||||| ||||||| |      |||| | || |||  |||||||| ||||| ||| |||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaacttataagcaagtcatagcctgtttttgtaagttctcccaaacagtgtcacaag 38104818  T
Q  145 tgcttatataagtagataagctcaaataa 173  Q
    ||| ||||| ||| |||||||| ||||||    
T  38104817 tgcctatatcagttgataagcttaaataa 38104789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 39105457 - 39105529
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| ||||||  |||||||| |||||||| | ||||||||||| ||||||||| |||||| ||||||||||    
T  39105457 tataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaaca 39105529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 18704113 - 18704046
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| |||||||||||||||| |||||||   | ||| ||||||||||||||||||||| |||||||    
T  18704113 tataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttat 18704046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 28586843 - 28586784
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||| |||||| |||||| || |||||||||||||| ||||| |||||||||||||||    
T  28586843 tataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaaaa 28586784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 32172646 - 32172793
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttctt 127  Q
    ||||| ||||||| |||||||| |||||||| |  |||||| |||||||||||||||||||  |||||| |     |||||  || || |||||| |||     
T  32172646 tataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctc 32172745  T
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaat 175  Q
    |||||   ||||||||||||||||   |||| ||||||||||||||||    
T  32172746 ccaaactatctcacaagtgcttatgctagtatataagctcaaataaat 32172793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 7907881 - 7908018
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataaca------tggtttcataagttcttccaaag 133  Q
    ||||||||||||| | ||||| || | |||| |||||| || ||||||||||| |||||||||| ||  ||      || |||||||||||||||||||     
T  7907881 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 7907980  T
Q  134 agtctcacaagtgcttatataagtagataagctcaaat 171  Q
    ||||||| ||||| |||| | | ||||||| |||||||    
T  7907981 agtctcataagtgtttatgttattagataaactcaaat 7908018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 11104984 - 11105050
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||||| ||||| ||| ||||||||||||||    || ||||||||||||||||||||||    
T  11104984 tttcataagttctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatc 11105050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 18543266 - 18543201
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||| ||| ||||    
T  18543266 tataagttgttttcataagctatcctggagagcttat-gaaataagctgaaaacaactcatggacat 18543201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 40205142 - 40205092
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||| |||||||||| |||| ||||| |||||||||||||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaa 40205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 40534199 - 40534265
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| |||| ||||||  | ||||||||||    
T  40534199 tataagttgttttcataagctatcccagagagcttatggaagtaagatgaaaactaattatgaacat 40534265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 14961925 - 14961994
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    |||||||||||||||||||||| ||| |||||| ||||  ||||| || |||| |||||||||| |||||    
T  14961925 tataaactataagttgttttcataagttatccttgagacgttatgaaattaagttgaaaataacatatga 14961994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 15003591 - 15003518
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||| ||||||| ||||||||| ||||| |||||||||||||   ||||| |||||| ||||||    
T  15003591 tataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacat 15003518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 16889734 - 16889795
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||| |||||||| ||||||| |||||||  |||||||||||| ||||||| |||||||    
T  16889734 ctataagctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 17368675 - 17368728
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||| |||||||| | ||||  ||||||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaa 17368728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 32849257 - 32849322
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||||||| ||||| || |||||||||||||||   |||||||||||| |||||| |||||    
T  32849257 tttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataagtcaat 32849322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 37526276 - 37526203
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| ||| | | || |||| ||||||||||||||||||||| | ||||| |||||    
T  37526276 tataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacat 37526203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 499768 - 499656
Alignment:
Q  73 ttatggaaataagctgaaaataacttatgaacataacat-----ggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctc 167  Q
    |||||||||||||||||||| ||||| | |||||  |||     | ||||||||||||| ||||| || || ||| |||||||| | ||||| |||||||    
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagctc 499669  T
Q  168 aaataaatcaatc 180  Q
    |||||| ||||||    
T  499668 aaataagtcaatc 499656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 31030207 - 31030147
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    ||||| |||||||| ||||||  ||||| |||| |||| ||||||||||||||||||||||    
T  31030207 tataagctataagtagttttcctaagctgtcctggagagcttatggaaataagctgaaaat 31030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 37611279 - 37611219
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||| |||||||| | |||| ||||||||||||| ||||||| | |||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacat 37611219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 37788009 - 37787949
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||| |||||||| | |||| ||||||||||||| ||||||| | |||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacat 37787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 3237093 - 3237156
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||| |||||||| ||||||||||| ||| |||||| ||||| |||||| | ||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaa 3237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 6587184 - 6587113
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 104  Q
    ||||| |||||||||||||||| |||||||  | |||||||| || |||||||||| ||| | |||||||||    
T  6587184 tataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaac 6587113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 7550494 - 7550439
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaa 184  Q
    |||||||||||||||||  |||| | ||| |||||||||||||||| |||||||||    
T  7550494 caaagagtctcacaagtaattatgtcagtggataagctcaaataaaccaatcaaaa 7550439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 15015923 - 15015981
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||| ||||| ||||||||||  |||||| | |||||||||||||||||||    
T  15015923 tttcataagttctcccaaacagtctcacaa-agcttatgtcagtagataagctcaaataa 15015981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 15074820 - 15074753
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||| ||| ||| || || | ||||||||||||||||||||| | |||||| ||||    
T  15074820 ctataagttgttttcataagttatactggaaagcttatggaaataagctgaaaacagcttatggacat 15074753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 19138795 - 19138721
Alignment:
Q  34 ataaactataagttgttttcacaagctatccta--gagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| |||||||||||||||| |||||||  ||  |||| ||||||||||||||||||||| || ||||| ||||    
T  19138795 ataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaacaatttatgtacat 19138721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 34975357 - 34975416
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||| ||||||||  |||||||||| |||| || ||||||||||||||||||    
T  34975357 tataagctataaattgttttcgtaagctatcctggagagctaatggaaataagctgaaaa 34975416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 35036947 - 35036912
Alignment:
Q  138 tcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||||||||||||||| |||||||||||||||||||    
T  35036947 tcacaagtgcttatatcagtagataagctcaaataa 35036912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 36796699 - 36796632
Alignment:
Q  113 gtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||| ||||| ||||||  ||||||||||||| |||| | | ||||||||||||||||| ||||||    
T  36796699 gtttcaaaagtttttccaagcagtctcacaagtgtttatgtcattagataagctcaaataagtcaatc 36796632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 41112889 - 41112826
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatca 177  Q
    ||||||||||||| ||| | | | ||||||||| ||||  ||||||||||||||||||||||||    
T  41112889 tttcataagttctgccagacaatgtcacaagtgtttatgcaagtagataagctcaaataaatca 41112826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 42646970 - 42647028
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||||||||| |||||  |||||||| || | |||||||||||||||||||    
T  42646970 tttcataagttcttccaaatagtct-tcaagtgctaatgtcagtagataagctcaaataa 42647028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 2880624 - 2880550
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| |||||||||||||| | ||||||| |   |||  |||||||||||||||||||| | ||||||||||||    
T  2880624 tataatctataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacata 2880550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 7319071 - 7319017
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||| |||||||| | ||||||||||| ||||||||||| || ||||||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 7319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 7984968 - 7985034
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||| | |||||| |||||||| | ||||| ||||| |||||||||||||| | ||||||||||    
T  7984968 ctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 10272508 - 10272442
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 99  Q
    ||||| |||||||||||||||| |||| ||| | ||||  ||||| |||||||||||||| ||||||    
T  10272508 tataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 11615501 - 11615567
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| ||| ||||||   || ||||||||||||||||||||| | |||||||||||    
T  11615501 tataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagcttatgaacat 11615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 15309070 - 15308996
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| ||||||||||||||||  ||||||| | |||| |||||| ||||||| |||||| |  |||||||||||    
T  15309070 tataagctataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacata 15308996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 28409419 - 28409369
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||  |||||||| | |||||||||||||||||||||||| ||||    
T  28409419 aagctatcccggagaacttgtagaaataagctgaaaataacttatggacat 28409369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 36318776 - 36318826
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||| |||||||| | ||||| ||||| ||||||||||||||    
T  36318776 taagttgttttcataagctatcttggagaatttatgtaaataagctgaaaa 36318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 41016172 - 41016230
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||| ||||||||||||||||||||| ||| | || | |||||| |||||||||||||    
T  41016172 tataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagctgaaa 41016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 42582516 - 42582562
Alignment:
Q  60 tatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| ||||||||||||||||||||| ||||||||| ||||| ||||    
T  42582516 tatcttagagaacttatggaaataagttgaaaataatttatggacat 42582562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 4619700 - 4619773
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||  ||| |||| |||||||| | ||||||||||||||||||| |||||  | |||||||||||    
T  4619700 tataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacat 4619773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 14182450 - 14182386
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||| |||||||| ||| |||||| ||||||||||| ||||||| |||||| || |||||||||    
T  14182450 tataagctgttttcataagttatcct-gagaacttatgaaaataagttgaaaacaatttatgaaca 14182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 38034014 - 38033953
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||| |||||||||| ||||||||| ||||||||   |||||| |||||||||||| |||||    
T  38034014 ataacttcttccaaacagtctcacaggtgcttatgccagtagaaaagctcaaataagtcaat 38033953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 6392618 - 6392574
Alignment:
Q  142 aagtgcttatataagtagataagctcaaataaatcaatcaaaata 186  Q
    |||||||||||| ||||||||| ||||||||| |||||| |||||    
T  6392618 aagtgcttatattagtagataaactcaaataagtcaatcgaaata 6392574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 10280642 - 10280602
Alignment:
Q  66 agagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||||||||||| || |||||||| ||||    
T  10280642 agagaacttatggaaataagctgataacaacttatggacat 10280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 10798393 - 10798349
Alignment:
Q  136 tctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||||||| ||||  |||||||||||| |||||||||||||    
T  10798393 tctcacaagtgcatatactagtagataagctaaaataaatcaatc 10798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 17827522 - 17827590
Alignment:
Q  38 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||   |||||||| ||||||  ||| | ||||||||||||||||| ||| ||||||    
T  17827522 actataagttgtttttgtaagctatcttagagaggttacgaaaataagctgaaaataatttacgaacat 17827590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 36774770 - 36774726
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    |||||| | |||||||||| |||| ||||||||||||||||||||    
T  36774770 tgtttttataagctatcctggagagcttatggaaataagctgaaa 36774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 40590758 - 40590818
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||| | ||||||||||||| | | |||| |||||||||||||||| |||| |||||||    
T  40590758 tataagctattttcacaagctaacttggagagcttatggaaataagctcaaaacaacttat 40590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 43300877 - 43300929
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||||||||||||   |||||||| | ||||||||||| |||||||||||||    
T  43300877 ctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8060669 - 8060733
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 104  Q
    |||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaac 8060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 30389092 - 30389165
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||| | |||||||| ||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacat 30389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 42215143 - 42215044
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgct 148  Q
    |||||| |||||||| | |||| |||||| |||||||||||||| |||||||||||||    || ||||||||||||| ||||| ||| |||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacat---gtgttttcataagttctcccaaacagtgtcacaagtgct 42215047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 30277315 - 30277254
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| |||||||| |||||||||||||||  |||||||||||||||||||| ||||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 11376782 - 11376841
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||| ||||| |||||||||||  ||||||| |||||||||||||||||||    
T  11376782 tttcataagttctcccaaatagtctcacaagaacttatatcagtagataagctcaaataa 11376841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 29973153 - 29973203
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  29973153 taagttgttttcacaagctatccttgagaatttatggaaataaactgaaaa 29973203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 9956884 - 9956819
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||||||||| || ||||| | ||||||||||| ||||||||||||||  |||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 11183544 - 11183597
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||    
T  11183544 ctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaa 11183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 30013211 - 30013272
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||| ||||||| |||||||| ||||||||||  |||||| ||||||||||||||||||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaata 30013272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 2458630 - 2458570
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| || ||||||||||||||| ||||||||||||| ||||||| | |||||||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacat 2458570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 8062322 - 8062390
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| ||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| | ||||||    
T  8062322 tataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 27028830 - 27028894
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| |||||||| |||||||| | |||| |||||| |||||||||||||||| ||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 31862486 - 31862554
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| ||||||| |||||||| ||| ||||||||||| |||||| |||||||||||||| | ||||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 2487999 - 2487940
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||| ||||| |||||||||||||||||| | ||||||| | |||||||||    
T  2487999 tttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataa 2487940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 4560584 - 4560647
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||||||||||| |  ||||||||||||||| | | ||||||||||||||||| ||||||    
T  4560584 cataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaataagtcaatc 4560647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 24326050 - 24326167
Alignment:
Q  57 agctatcctagagaacttatggaaataagctgaaaataacttatgaa---cataacatggtttcataagttcttccaaagagtctcacaagtgcttatat 153  Q
    ||||||| | |||||||||  ||||||||| ||||| |||||||| |   |||||  || || |||||| ||| ||||| ||||||||||||||||||      
T  24326050 agctatcgttgagaacttaaagaaataagcggaaaacaacttatgtatatcataaactgtttccataagctctcccaaacagtctcacaagtgcttatgc 24326149  T
Q  154 aagtagataagctcaaat 171  Q
     |||||||||||||||||    
T  24326150 cagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 43504750 - 43504889
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca-----taacatggtttcataagttcttccaaag 133  Q
    ||||||| |||||| | |||||||| | |||||||||||||||||||||||||| | ||||| ||||     |||  || |||||| |||||| | |||     
T  43504750 ctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaac 43504849  T
Q  134 agtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||| ||||||||||||    |||||||||||| ||||||    
T  43504850 agtcacacaagtgcttaagccagtagataagcttaaataa 43504889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 5088852 - 5088918
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||| |||||| | |||||| ||||    
T  5088852 tataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacat 5088918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 10939454 - 10939520
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||||| | ||| ||||||| ||||||||||| | |||||||| ||||||||| ||||||    
T  10939454 tttcataagttctcctaaacagtctcagaagtgcttatacaggtagataaactcaaataattcaatc 10939520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 14247300 - 14247242
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||| ||||||||||||||    
T  14247300 ataaactataagctgttttcgtaagatatcgtagagaacttatgaaaataagctgaaaa 14247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 28769416 - 28769342
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| ||||||| |||||||| |||||||  | ||||  |||||||||||||||||||| |||||||| |||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacata 28769342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 29973075 - 29973133
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||| |||||||||||||||| |||||||||| ||||  |||||||||||| |||||||    
T  29973075 ataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaa 29973133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 41606953 - 41606907
Alignment:
Q  60 tatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacat 41606907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 4558797 - 4558858
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||| ||||| || ||||||||||||||| ||||||||||||| || |||| |||||||    
T  4558797 ctataagctgtttccataagctatcctagagagcttatggaaataaactaaaaacaacttat 4558858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 31705078 - 31705151
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||| |||||||| ||||| |||| ||||  |||||||||||||||||||| | |||||| ||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacat 31705151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 778468 - 778532
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    |||||||||||||| |||| |||||||||||||||||| | |||| |||||  ||||||| ||||    
T  778468 tttcataagttcttgcaaacagtctcacaagtgcttatttcagtaaataagtacaaataagtcaa 778532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 1113204 - 1113248
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||    
T  1113204 caaagcgtttcacaagtgcttatacaagtagataagctcaaataa 1113248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 4511107 - 4511159
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 166  Q
    |||||||||||||| | || |||||||||||||||||||  ||||||||||||    
T  4511107 tttcataagttctttcgaatagtctcacaagtgcttataccagtagataagct 4511159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 7918844 - 7918713
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtct 138  Q
    |||||||||||||||| |||||||| |  ||| ||| ||||||||||||||||| |  ||||    ||||  || ||||||||| ||| ||||| |||||    
T  7918844 ctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat---aataagttgttttcataagctctcccaaacagtct 7918748  T
Q  139 cacaagtgcttatataagtagataagctcaaataa 173  Q
    |||||||| ||||   |||||||||| | ||||||    
T  7918747 cacaagtgtttatgctagtagataagtttaaataa 7918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 20672757 - 20672816
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| | |||||||||| |||| |||||| |||||||||||||| | |||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacat 20672816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 26473820 - 26473777
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataag 85  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataag 26473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 38307665 - 38307728
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||| |||| || |||||| ||||    
T  38307665 aagttgttttcacaagctatcttggagaaattatgaaaataagccgaaagtagcttatgcacat 38307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 3536988 - 3536950
Alignment:
Q  67 gagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3536988 gagaacttatggaaataagctgaaaacaatttatgaaca 3536950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 5069697 - 5069763
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| ||| |||| | || | |||||| ||||||||||||||| ||||||||||||    
T  5069697 tataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacat 5069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 5226604 - 5226654
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaa 174  Q
    ||||||||| ||||||| ||||||||||  ||||||||||| |||||||||    
T  5226604 tcttccaaacagtctcataagtgcttatgcaagtagataagatcaaataaa 5226654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 11185221 - 11185287
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||   ||||||| | |||| || ||||||||||| |||||| |||||||||||||    
T  11185221 tataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacat 11185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 29417781 - 29417711
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||||||||| |||||||| || ||||| | ||||||||||   |||||||| |||||| ||||||||    
T  29417781 tataaactataagatgttttcataaactatcattgagaacttatatgaataagctaaaaatagcttatgaa 29417711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 44401577 - 44401627
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| ||||| |||||||||||||||||||||||||| ||  |||||||||    
T  44401577 aagccatcctggagaacttatggaaataagctgaaaacaatgtatgaacat 44401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 2364451 - 2364382
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaa 183  Q
    ||||||||  ||||||||| |||||||||||| ||||| | || ||||||| |||||||| || ||||||    
T  2364451 tttcataatctcttccaaacagtctcacaagtacttatgtcagaagataagttcaaataagtcgatcaaa 2364382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 2595066 - 2595001
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||| |||||    |||| ||||||||  ||||||||||||| |||||||||||||    
T  2595066 ataagttgttttcataagctgcattagacaacttatgagaataagctgaaaacaacttatgaacat 2595001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 7645977 - 7646030
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||| |||||| |||  | | |||||||||||||||||||||    
T  7645977 ctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaa 7646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 8535833 - 8535780
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||||| ||  ||||||||||| |||||||||||||||| |||||| |||||    
T  8535833 tgttttcataaattatcctagagagcttatggaaataagcttaaaatagcttat 8535780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 11745723 - 11745662
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||| |||||| | |||||||||||| || |||||| || ||||||||||| |||||||    
T  11745723 ctataagctgtttttataagctatcctagtgagcttatgaaactaagctgaaaacaacttat 11745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 36643954 - 36643909
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    |||||| |||||||| | |||||| |||||||||||||||||||||    
T  36643954 ttttcataagctatcatggagaacgtatggaaataagctgaaaata 36643909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 39561616 - 39561559
Alignment:
Q  35 taaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||||||  |||||||| |  | | |||||||||||||||||||||    
T  39561616 taaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagctgaaaa 39561559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 6950342 - 6950382
Alignment:
Q  60 tatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  6950342 tatcctaaagagcttatggaaataagctgaaaacaacttat 6950382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 12851182 - 12851242
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||| ||||| |||| |||| |||||| |||||||| ||||| | |||||||||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacat 12851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 18331815 - 18331859
Alignment:
Q  136 tctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||||||||||| | |||||||||| |||||||| ||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatc 18331859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 18931375 - 18931323
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataag 85  Q
    ||||| || |||| |||||||| ||||||||||||||||||| | ||||||||    
T  18931375 tataagctgtaagctgttttcataagctatcctagagaacttgttgaaataag 18931323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 27728098 - 27728030
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| ||| ||||||||||| ||||||||||||||   | ||||||||||||| |||| | ||||||    
T  27728098 tataaagtattagttgttttcataagctatcctagagggatgatggaaataagctaaaaaaagcttatg 27728030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 30627973 - 30627929
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaata 83  Q
    |||||||||||||||| ||| |||| |||||| ||||||||||||    
T  30627973 ctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 30918140 - 30918176
Alignment:
Q  67 gagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  30918140 gagagcttatggaaataagctgaaaacaacttatgaa 30918176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 34570446 - 34570522
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctg-aaaataacttatgaacataa 108  Q
    ||||||| | ||||| ||||||||| |||||| ||||| | ||||||||||||||| |||| | |||||| ||||||    
T  34570446 tataaacaacaagttattttcacaaactatccgagagagcatatggaaataagctgtaaaacagcttatggacataa 34570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 41336722 - 41336650
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||| || ||||||||| ||||||||   |||| |||  |||||||||||||||| ||||||| ||||    
T  41336722 tataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaacaacttataaaca 41336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 42215367 - 42215311
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||| | |||||||| |||| |||||| |||||||||||||| | ||||||||||    
T  42215367 ttttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaaca 42215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 44236886 - 44236834
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 99  Q
    |||||||| |||||||  | |||| |||||| |||||||||||||||||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 11513891 - 11514041
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataaca---tggtttcataagttcttcc 129  Q
    ||||| |||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| |||||   |||  ||   || ||||||||| |||       
T  11513891 tataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttataggcatgccatgctgttttcataagctctcta 11513990  T
Q  130 aaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||| ||||||||||||||||||   ||||||||| |||||||||| |||||    
T  11513991 aaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatc 11514041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 22681262 - 22681189
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  22681262 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 22681189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 29316851 - 29316779
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| ||||||| ||||||||  ||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  29316851 ataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacat 29316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 8017441 - 8017579
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacat-----ggtttcataagttcttccaaagagtctcac 141  Q
    |||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||||||||| |||     | ||||||||||||| ||||| | || |||    
T  8017441 tgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttctcccaaataatcgcac 8017540  T
Q  142 aagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||||| | | ||||||| ||||||||| ||||||    
T  8017541 aagtgcttatgtcaatagataacctcaaataagtcaatc 8017579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 29430837 - 29430898
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaat 175  Q
    ||||||||||||||||||| |||| |||||||| |||| | |||||||||||||||||||||    
T  29430837 tttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagctcaaataaat 29430898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 16867738 - 16867802
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| ||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||||    
T  16867738 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 16867802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 9174813 - 9174880
Alignment:
Q  38 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||| |||||||| |||||||| || ||| |||||| |||||||||||||||| ||||||||||    
T  9174813 actataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 37419643 - 37419592
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  37419643 caaagagtttcacaagtgcttatataagtagataaactcaaataagtcaatc 37419592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 40158719 - 40158870
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagag 135  Q
    |||||||||||||| ||| ||| || |||| |||||| || ||||||||||| ||||||| ||     |||||  || ||||||||||||  ||||  ||    
T  40158719 ataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcag 40158818  T
Q  136 tctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    |||||||||| ||||| | |||||||| ||||||||||  ||||| ||||||    
T  40158819 tctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaatag 40158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 43529907 - 43529784
Alignment:
Q  61 atcctagagaacttatggaaataagctgaaaataacttatgaacataacat-----ggtttcataagttcttccaaagagtctcacaagtgcttatataa 155  Q
    |||||||||| |||||| |||||| ||||||||| |||||||||||  |||     | |||||||| |||| ||||| ||| ||| |||||||||||  |    
T  43529907 atcctagagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttatacca 43529808  T
Q  156 gtagataagctcaaataaatcaat 179  Q
     ||||||||||||||||| |||||    
T  43529807 atagataagctcaaataagtcaat 43529784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 18179317 - 18179172
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca-----taacatggtttcataagttctt 127  Q
    ||||| ||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||| || ||| |||     ||| ||| ||||||||   |||    
T  18179317 tataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacactt 18179218  T
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| |  || |||||||||||| ||| |||||||||| ||||||    
T  18179217 ccaaacaaacttacaagtgcttatgtaactagataagcttaaataa 18179172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 29628820 - 29628748
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| |||||||||||| ||| |||||||| | || || |||||||||||||||||||| || |||||||||    
T  29628820 tataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaaca 29628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 43199928 - 43199980
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||| ||||    
T  43199928 ccaaacagtctcacaagtgcttatatgagtagataagttcaaataaatgaatc 43199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 1893352 - 1893285
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||| |||||||  |||||||| | |||||||| || ||||||||||||||||||||||| ||||    
T  1893352 ctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacat 1893285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 22878180 - 22878243
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||| ||| ||||| |||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  22878180 cataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatc 22878243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 35810857 - 35810802
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||||||| | |||||||||||||||||||| || |||||| |||||||||||||    
T  35810857 ttgttttcatacgctatcctagagaacttatgaaagtaagctaaaaataacttatg 35810802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 39983335 - 39983402
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| |||||||||||||||| |||||||||| |||| || ||| |||||| ||||||||| |||||    
T  39983335 tataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttat 39983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 41170689 - 41170748
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||| ||||||| ||||||||||||| |||| | ||||||||| |||||||||    
T  41170689 tttcataagttattccaaatagtctcacaagtgtttatgttagtagataaactcaaataa 41170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 1625900 - 1625966
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| |||||||| | ||||||||| | |||| ||||||||| | |||||||||||    
T  1625900 tataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||| |||||||| | |||| |||||| |||||||||||||| ||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 35485910 - 35485984
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| |||||||||||||| | ||||||||||  ||| | ||||||||| ||||||||| | ||||||||||||    
T  35485910 tataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacata 35485984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 39621983 - 39622089
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 166  Q
    |||| |||||||||||||||| || |||||||     |||||  || |||||||||||||  |||| ||| || |||||||||||| ||||||||||| |    
T  39621983 cttaaggaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaagtagataagtt 39622082  T
Q  167 caaataa 173  Q
    |||||||    
T  39622083 caaataa 39622089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 42419990 - 42420068
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacat 111  Q
    ||||| ||||||| | |||||| |||||||||| || | ||||||||||| ||||||||| || |||||||||| ||||    
T  42419990 tataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacat 42420068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 43985080 - 43985006
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||| ||||||||||||||| |||||||| |  ||| |||||| ||||||||||||||||  | |||||||||    
T  43985080 tataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacata 43985006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 6546994 - 6547055
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataa 108  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||||||| |||| | ||||||    
T  6546994 tgttttcacaagctatcttagagaccttatagaaataagttgaaaatagcttaaggacataa 6547055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 10285853 - 10285926
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||| |||| || |||||| | ||||||||||||||||||||| |||||| | |||||| ||||    
T  10285853 tataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacat 10285926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 26143714 - 26143645
Alignment:
Q  36 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| |||| |||||||| |||||| | | ||||||||||| |||||||||||||||||| | ||||||    
T  26143714 aaactgtaagctgttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaaca 26143645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 40279197 - 40279262
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||||||||| |||||||  | ||||||||||| |||| |||||||||||  |||||||||    
T  40279197 tataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaaca 40279262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 7928360 - 7928304
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||| ||| |||||| | ||||||||||| |||||||||||||| ||||||||||||    
T  7928360 tttttacaggctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 17443589 - 17443541
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaata 172  Q
    ||||||||| |||||||||||||||||||| |||| ||||| |||||||    
T  17443589 tcttccaaacagtctcacaagtgcttatatcagtatataagttcaaata 17443541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 41809301 - 41809249
Alignment:
Q  54 acaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||| |||| | |||||||||||||||| |||| |||||||||||||    
T  41809301 acaagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacat 41809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 6227744 - 6227811
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||||||||||| ||||||| |||||||  | |||| ||||||| || |||||||||| |||||||    
T  6227744 tataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttat 6227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 33942149 - 33942216
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||| |||| ||| |||||| || ||| |||| ||||||||| | |||||||||||    
T  33942149 ctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacat 33942216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 35993444 - 35993389
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| || |||||||| ||||||||||||| |||||||||||||| || |||||    
T  35993444 ttgtttgcataagctatcatagagaacttatgaaaataagctgaaaacaatttatg 35993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 5133772 - 5133834
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    |||||| |||||||| ||| ||||  ||||| |||||||||||||||||||| || |||||||    
T  5133772 tataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatga 5133834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 10563628 - 10563562
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| ||||||| ||  ||| |||| | |||||||||||||||| |||||| ||||    
T  10563628 tataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacat 10563562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 10884592 - 10884546
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataag 85  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||    
T  10884592 ctataagctgttttcataagctatcctagagagcttatgaaaataag 10884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 11488277 - 11488339
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    |||||| || ||||| |||||||||| ||||  ||||| |||||||||||||| |||||||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataagctgaaaacaacttatga 11488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 26548532 - 26548602
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaa 184  Q
    |||||||||  |||||||| |||||||||| | ||||| |  ||||||||||||||||||  |||||||||    
T  26548532 tttcataagcccttccaaatagtctcacaaatacttatgtcggtagataagctcaaataagccaatcaaaa 26548602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 35486440 - 35486382
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||| ||||||| ||||||| ||||||||||| ||||  ||||||||||| |||||||    
T  35486440 tataatctataagctgttttcgcaagctatcctggagaggttatggaaatacgctgaaa 35486382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 38078480 - 38078414
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| |||||||||| |||||||| | |||| |||||| |||| |||| |||| |||||||||||||    
T  38078480 tataggttgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacat 38078414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 41407603 - 41407668
Alignment:
Q  38 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 104  Q
    ||||||||||| |||||  ||||||| | ||||||||||  |||||||||||||| |||||||||||    
T  41407603 actataagttggtttcatcagctatc-tggagaacttataaaaataagctgaaaacaacttatgaac 41407668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 42621452 - 42621386
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 99  Q
    ||||| ||||||| |||||||| ||| ||| || |||||||| || |||||||||||||| ||||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaacaactta 42621386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 45229517 - 45229563
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  45229517 ttgttttcataagctatcttcgagaacttatgaaaataagctgaaaa 45229563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 3611233 - 3611278
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  3611233 tgttttcacaagctatcttggagaacttatgaaaataagctaaaaa 3611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 5902540 - 5902503
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttat 151  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  5902540 tttcataagttcttccaaacagtctcacaagtgtttat 5902503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 7193926 - 7193865
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    |||| |||||||||| |||||| |||||  | | |||||||||||| |||||||||||||||    
T  7193926 tatagactataagttattttcataagctgccgtggagaacttatggcaataagctgaaaata 7193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 9530789 - 9530732
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||||| |||| |||||| || |||||| ||||||||||||| ||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacat 9530732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 30552715 - 30552662
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||| || |||||| || |||||||||||| |||||||||||||||| ||||    
T  30552715 ctataaattattttcataaactatcctagagagcttatggaaataagctaaaaa 30552662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 33931647 - 33931574
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||| |||||||| |||||||  | ||||| |  ||||||||||||||||  |||||||||||||    
T  33931647 tataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaacat 33931574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 35378570 - 35378537
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||| |||||||||||||||||||||||||||    
T  35378570 cttatgaaaataagctgaaaataacttatgaaca 35378537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35713286 - 35713331
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||||||| ||||  |||||||| |||||||||||||||||    
T  35713286 agtctcacaagtgtttatgcaagtagattagctcaaataaatcaat 35713331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 37276837 - 37276882
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| |||||||||||||||||||| ||||||||| || ||||||    
T  37276837 ccaaacagtctcacaagtgcttatattagtagataaacttaaataa 37276882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 41817177 - 41817234
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| || ||||||| |||| ||||||||||||||||||||| || |||| |||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacat 41817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 42457959 - 42458008
Alignment:
Q  51 ttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||| |||||||| |||||||| |||| |||||||||||||| |||||||    
T  42457959 ttcataagctatcttagagaacatatgaaaataagctgaaaacaacttat 42458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 43911068 - 43911003
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||| |||||||| | || | ||| ||  ||||||||||||| |||||||||||||    
T  43911068 ataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacat 43911003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 44443330 - 44443387
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| | |||| | |||| |||||||||||||| |||||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 3059340 - 3059292
Alignment:
Q  44 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||| ||||||| |||||||  |||||||||||| |||||||    
T  3059340 agttgttttcataagctatgctagagagtttatggaaataaactgaaaa 3059292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 5781685 - 5781721
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||| |||||| |||||||||||||||||||||    
T  5781685 aagctatcatagagagcttatggaaataagctgaaaa 5781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 15370300 - 15370248
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||| |||||||||| |||||||   ||||||||||||||||||| ||||||    
T  15370300 ccaaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatc 15370248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 25609878 - 25609934
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||||| | ||||||  |||||||||||| ||||| | |||||||||||||||||||    
T  25609878 cataagctattccaagcagtctcacaagttcttatgttagtagataagctcaaataa 25609934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 28039409 - 28039337
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||   |||||| ||||| || | || || |||||||||||||||||||| | ||||||||||    
T  28039409 tataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaaca 28039337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 28933824 - 28933876
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| ||||||||| ||||||||||||||| || || |||||||| ||||||    
T  28933824 tataaattgttttcataagctatcctagagagctgatagaaataagttgaaaa 28933876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 31982378 - 31982442
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    ||||||||||||| ||||| ||| ||||| |||||||| | ||||| |||||| |||||| ||||    
T  31982378 tttcataagttctcccaaatagtgtcacaggtgcttatgttagtaggtaagcttaaataagtcaa 31982442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 32694212 - 32694264
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||| || ||||||||||||| |  || |||||||||||||||||    
T  32694212 tataagttgtttgcataagctatcctagatagattgtggaaataagctgaaaa 32694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 34927045 - 34927097
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaa 169  Q
    |||||||||||||||| ||||| | |||||||||| | |||| ||||||||||    
T  34927045 cataagttcttccaaacagtcttataagtgcttatgtcagtaaataagctcaa 34927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 40279268 - 40279332
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||| |||||||  | ||||||||||| |||| ||||||||| |  |||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 40279338 - 40279402
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||| |||||||  | ||||||||||| |||| ||||||||| |  |||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 41851534 - 41851598
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||||| |||||||| | ||||| ||||| || |||||||| || | ||||||||    
T  41851534 ctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaa 41851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 43141864 - 43141932
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| ||||||| |||||||| ||||||||||  |||  ||||||||||||  |||||| ||||||||    
T  43141864 tataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatg 43141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 10199469 - 10199333
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatgg-----tttcataagttcttccaaagagtctcacaa 143  Q
    |||||| |||||||  |||||| |||||| |||||||||||||| |||||||||||||  |||       |||||| |||||| ||||| ||| ||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaa 10199370  T
Q  144 gtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||| | ||||||||||||||||||| ||||||    
T  10199369 gtgcttatgttagtagataagctcaaataagtcaatc 10199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 25479580 - 25479647
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  25479580 ctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacat 25479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 7137075 - 7137005
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||| ||||||| |||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaa 7137005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 23902144 - 23902071
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| |||||||| |||||| ||||||||| ||||||||||| |||||||| ||||    
T  23902144 tataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacat 23902071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 15558217 - 15558279
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    |||||| |||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatga 15558279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 47885088 - 47885039
Alignment:
Q  55 caagctatcctagagaacttatggaaataagctgaaaataacttatgaac 104  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  47885088 caagctatcatagagaacttatggaaataagctgaaaacaacttatgaac 47885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 12564569 - 12564509
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||||||||||||| |||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 6659507 - 6659581
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| ||||||| |||||||| |||||| || ||||| ||||| ||||||||||||||| |||||||| |||||    
T  6659507 tataagctataagatgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttatggacata 6659581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 14630043 - 14629969
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| ||||||| | |||||| |||||||| | ||||  |||||||||||||||||||| ||||||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacata 14629969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 34290229 - 34290299
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||| ||||||| |||||||| |||||||| |  |||||||||| |||||||||||||| ||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 6279408 - 6279465
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  6279408 ttttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacat 6279465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 31517817 - 31517672
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatgg-----tttcataagttctt 127  Q
    ||||| ||||||| ||| |||| || || || | |||| |||||| |||||||||||||| | |||||||||||  ||||      ||| |||||||||     
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctc 31517718  T
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| ||||||||||||||||||   |||| ||||||||||||||    
T  31517717 ccaaacagtctcacaagtgcttatgccagtaaataagctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 35017569 - 35017642
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||| | |||||||| ||||| |||| |||| |||||||||||||| ||||||||||||||| ||||    
T  35017569 tataatctatatgctgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacat 35017642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 49888760 - 49888821
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||| |||| ||||||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  49888760 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 49888821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 6102147 - 6102219
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||| |||||||| |||||||| ||||||||   ||||| |||||||||||||||||||| || |||||||||    
T  6102147 tatacactataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaaca 6102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 18327137 - 18327065
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaata 186  Q
    ||||||||||||||||||| ||| ||| ||||||||||   |||||||||||||||||||  ||||| |||||    
T  18327137 tttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaata 18327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 38882988 - 38882917
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||| ||||||||||||||| ||||| || ||||||||||||| ||||||| |||||| | ||||||||||    
T  38882988 tataaaatataagttgttttcataagctctc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 38882917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 47598490 - 47598430
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||||||||| |||||||||| |||| ||||||| || |||||||||| ||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatggcaacaagctgaaaacaacttatg 47598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 7218151 - 7218092
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||||||||||||| || ||||||| ||||||||||| ||||||| ||||||    
T  7218151 tataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 15437966 - 15438029
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||| | |||||||| ||||  ||| ||||||||||||||| ||||||||||||||    
T  15437966 aagttgttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacat 15438029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 17269251 - 17269395
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacat--gg---tttcataagttcttccaaagag 135  Q
    |||||||||||||| |||||||||| |||| |||| || |||||| | |||| |||| ||||||||  |||  ||   |||||||||  || ||||| |     
T  17269251 ataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcactaccaaacaa 17269350  T
Q  136 tctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||| ||| ||||| ||||||| |||||||| ||||||    
T  17269351 tctcacaagtgtttaaataagaagataagttcaaataagtcaatc 17269395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 28077132 - 28077073
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| |||||||  |||||| ||||| ||||||||||||||| |||||||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 35590969 - 35590898
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 104  Q
    ||||| |||||||| | ||||| |||||||| | |||| ||||||||||||||||||||| |||| ||||||    
T  35590969 tataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaacaactgatgaac 35590898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 37241899 - 37241828
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct-gaaaataacttatgaa 103  Q
    ||||| ||| |||||||||||| ||| ||||||||||| |||||| ||||||||| ||||| ||||||||||    
T  37241899 tataagctagaagttgttttcataagatatcctagagagcttatgaaaataagctggaaaaaaacttatgaa 37241828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 37818459 - 37818498
Alignment:
Q  60 tatcctagagaacttatggaaataagctgaaaataactta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  37818459 tatcctagagaacttatggaaataagctgaaaacaactta 37818498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 39348038 - 39347971
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||| || |||||||  | | ||||||||||||||||||||| |||||||| ||||    
T  39348038 ctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacat 39347971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 5924055 - 5924101
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagc 86  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  5924055 tataagttgttttcataagttatcctagagagcttatggaaataagc 5924101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 8130430 - 8130488
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||| |||||||||||||||| |||||||| | || |||||||||||| ||||||||||    
T  8130430 ataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaa 8130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 26779996 - 26779934
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||||||||||| |||||||| |  |||||||||| ||||||| |||||| ||||||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 31118047 - 31118109
Alignment:
Q  44 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||| |||||| |||   |||||||||||||||||||||||| |||| ||||||||    
T  31118047 agttgttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacat 31118109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 34952217 - 34952267
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||    
T  34952217 taagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaa 34952267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 51695558 - 51695500
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||| |||||||| | ||||| ||||| |||||||||||||||| ||||||||||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 3224416 - 3224489
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||| | |||||| | ||||||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  3224416 tataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacat 3224489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 15361058 - 15361107
Alignment:
Q  58 gctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  15361058 gctatcctggagagcttatgaaaataagctgaaaacaacttatgaacata 15361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 21002244 - 21002293
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||| |||||||||||| |||||  ||||||||||||||||||||    
T  21002244 tcttccaaacagtctcacaagttcttatgcaagtagataagctcaaataa 21002293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 30257676 - 30257749
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| || ||||||||||||| || ||||||| |||  ||||| ||||||||||||||| | |||||||||||    
T  30257676 tataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacat 30257749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 32182272 - 32182337
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||| || ||||| |  ||| |||| |||||||||||||||| |||||||||||||    
T  32182272 ataagttgttttcaaaatctatcttgaagagcttaaggaaataagctgaaaaaaacttatgaacat 32182337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 38503535 - 38503470
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||||    ||||||| | ||||||||||| |||||||||||||| ||||||||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 49175619 - 49175676
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 97  Q
    |||||||| ||| ||||||||||| |  ||||||||||||||||||||||||| ||||    
T  49175619 tataagttatttgcacaagctatcatgtagaacttatggaaataagctgaaaacaact 49175676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 3320009 - 3319945
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 97  Q
    ||||||||||||||||||  |  |||||||| |||||| |||||||| |||||||||||| ||||    
T  3320009 tataaactataagttgttaacgtaagctatcatagagatcttatggatataagctgaaaacaact 3319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 3597262 - 3597206
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||| ||||||||||||| |||||| | ||||||| ||||||||| ||||||    
T  3597262 tcttccaaacagtctcacaagtggttatatcattagataacctcaaataagtcaatc 3597206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 4757417 - 4757481
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    ||||||||||||| |||||  |||||||||||| |||| | | ||||||||||||||||| ||||    
T  4757417 tttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaa 4757481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 6292520 - 6292637
Alignment:
Q  67 gagaacttatggaaataagctgaaaataacttatgaacataacatg----gtttcataagttcttccaaagagtctcacaagtgcttatataagtagata 162  Q
    |||| |||||| |||||||||||||| | |||||||||||  |||     |||| | || |||| ||||| | ||||| |||||||||| | ||||||||    
T  6292520 gagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaaaaattctcccaaacaatctcaaaagtgcttatgtcagtagata 6292619  T
Q  163 agctcaaataaatcaatc 180  Q
    ||||||||||| ||||||    
T  6292620 agctcaaataagtcaatc 6292637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 12564485 - 12564425
Alignment:
Q  119 taagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||| ||| ||||| |||| ||||||||||||||| |||| |||||||||||||| |||||    
T  12564485 taagctctcccaaacagtcacacaagtgcttatatcagtatataagctcaaataagtcaat 12564425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 26946524 - 26946464
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    ||||| |||||||| ||||||| |||||||| ||||||| | ||| |||||||||||||||    
T  26946524 tataagctataagtcgttttcataagctatcttagagaagtcatgaaaataagctgaaaat 26946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 27820414 - 27820342
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| ||||| | |||||| | |||||||| | ||||| ||||| |||||||||||||||| ||||||||||    
T  27820414 tataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 28262687 - 28262623
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||| |||| || ||||| ||||    
T  28262687 taagctgttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacat 28262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 33976686 - 33976738
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||  || |||||||||||| |||||||||||||| ||||||    
T  33976686 tataagttgttttcttaacctatcctagagagcttatggaaataagttgaaaa 33976738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 35351038 - 35351106
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||||||||| |||| || |||||||||||| ||||   |||||||||||||| ||||||| ||||||    
T  35351038 ctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaacttataaacata 35351106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 37842431 - 37842359
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||| |||||||||||||||| |||||||| |  |||||||||  ||||||||||||||   |||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacat 37842359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 4549223 - 4549290
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| ||||||| || |||||||| ||||||  || | ||||||||||||||||||||| |||||||    
T  4549223 tataagctataagctgctttcacaaactatccaggatagcttatggaaataagctgaaaacaacttat 4549290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 9602631 - 9602572
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||| |||||||||||||||||  | |||||||||||||| |||| |||||| ||||||    
T  9602631 ccaaatagtctcacaagtgcttaagttagtagataagctcagataagtcaatccaaatag 9602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 10744300 - 10744367
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||| |||||||| ||||| || ||||||||||||  ||||||| |||||| | |||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacat 10744367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 28910089 - 28910132
Alignment:
Q  137 ctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  28910089 ctcacaagtgcttatataagtagataaactcatacaaatcaatc 28910132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 30014139 - 30014096
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaa 30014096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 32515429 - 32515374
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaata 172  Q
    |||||| ||| ||||| |||||||||||||||||| | ||||||||| ||||||||    
T  32515429 cataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaata 32515374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 35677484 - 35677523
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagc 86  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  35677484 tgttttcacaagctatcctgaagaacttatggaaataagc 35677523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 40485760 - 40485717
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagat 161  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||    
T  40485760 ataagttctcccaaacagtctcacaagtgcttatgtaagtagat 40485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 51929845 - 51929794
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    |||||| |||||||| ||||||| ||||||| ||||||||||||||| ||||    
T  51929845 tataagctgttttcataagctattctagagagcttatggaaataagccgaaa 51929794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 219622 - 219556
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||||||| || ||||| ||||  ||| ||||||||||| ||||||||| | ||||||||||    
T  219622 ctataagttgtttacataagctgtcctgaagagcttatggaaatgagctgaaaacagcttatgaaca 219556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 7262588 - 7262522
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| |||||| ||||||||||  ||| ||| |||||||||| |||||| | |||||||||||    
T  7262588 tataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacat 7262522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 14737717 - 14737651
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||| ||||| | ||||| ||||||||||||||||||   |||| ||||||||||||||| |||||    
T  14737717 tttcacaagttttcccaaacagtctcacaagtgcttattctagtaaataagctcaaataaaccaatc 14737651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 25005874 - 25005808
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 99  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||  ||| ||||| |||||| ||||    
T  25005874 tataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 27140478 - 27140544
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||| | |||||||| | |||| |||||| |||||||||||||| |||||||| ||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacat 27140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28837324 - 28837274
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaa 184  Q
    |||||| ||||||||||| | |||||||||||||||||||  |||||||||    
T  28837324 agtctctcaagtgcttatgtcagtagataagctcaaataagccaatcaaaa 28837274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 45975683 - 45975753
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||| ||| ||| |||||||| |||||||| | ||||| ||||| |||||||||||||| | ||||||||    
T  45975683 tataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 50319273 - 50319311
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaa 81  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  50319273 aagttgttttcataagctatcctagagagcttatggaaa 50319311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 3924617 - 3924690
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||| ||||||||| | ||||||||||  |||  |||||||||||||| ||||| ||||||| |||||    
T  3924617 tataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacat 3924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 4920751 - 4920694
Alignment:
Q  123 ttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||| |||||||||||||||||| ||| ||| ||| ||||||| ||||||| ||||||    
T  4920751 ttctcccaaagagtctcacaagtacttctatgagtcgataagcacaaataagtcaatc 4920694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 5082928 - 5082977
Alignment:
Q  138 tcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||||||||| ||||||||||| ||||||||  ||||| ||||||    
T  5082928 tcacaagtgcttataaaagtagataagttcaaataagccaatccaaatag 5082977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 12564951 - 12564878
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| |||||||| |  ||  |||| |||||||||||||||| | |||||| ||||    
T  12564951 tataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacat 12564878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 15581343 - 15581392
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||| | |||||||||||||||| | |||||||||||| ||||||    
T  15581343 tcttccaaacaatctcacaagtgcttatgtcagtagataagctaaaataa 15581392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 22810698 - 22810653
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataag 85  Q
    ||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  22810698 tataagttgttttcataagttatcatagagaacttacggaaataag 22810653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 23373300 - 23373239
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||| ||| ||||| | |||||||||||||||||| |||||| ||| |||||||| |||||    
T  23373300 ataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaat 23373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 24417717 - 24417660
Alignment:
Q  123 ttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||| |||| |||||||||||| ||||||| | ||||||| ||||||||| ||||||    
T  24417717 ttctttcaaatagtctcacaagtacttatattaatagataaactcaaataagtcaatc 24417660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 27820250 - 27820201
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||| || |||| ||||| |||||||||||||||| ||||||||||    
T  27820250 aagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaaca 27820201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 29793669 - 29793624
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||||||| |||| | ||||||||||||||||||| |||||    
T  29793669 agtctcacaagtgtttatgtcagtagataagctcaaataagtcaat 29793624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 32958739 - 32958792
Alignment:
Q  137 ctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatagttt 190  Q
    |||||||||||||||   ||||||||||||||||||| |||||| ||| |||||    
T  32958739 ctcacaagtgcttatgacagtagataagctcaaataagtcaatctaaacagttt 32958792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 37591529 - 37591566
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaat 171  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  37591529 agtctcacaagtgcttatatctgtagataagctcaaat 37591566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 42556708 - 42556639
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    ||||| |||||||||||||||| |||||||| | ||||  ||||   ||||| |||||||||||||||||    
T  42556708 tataagctataagttgttttcataagctatcatggagagtttatatcaataaactgaaaataacttatga 42556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 44928178 - 44928125
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaat 171  Q
    ||||||||||||||| | ||| |||||||||||||  |||| ||||||||||||    
T  44928178 ataagttcttccaaacaatcttacaagtgcttatactagtaaataagctcaaat 44928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 3223670 - 3223733
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||  ||| |||||||| || |||||| |||||||||||||| ||||||| |||||    
T  3223670 taagttgttttcgtaagttatcctagcgagcttatg-aaataagctgaaaacaacttataaacat 3223733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 3234086 - 3234022
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||| | |||||||  | ||||||||||| |||||||  ||||| ||||||||||    
T  3234086 ctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaa 3234022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 5592762 - 5592694
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| |||||||||||||||| ||||||  ||  ||| |||||| |||||||||| ||| ||||||||    
T  5592762 tataagctataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 6659773 - 6659825
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||| ||||||||||||||||||   |||||||||||| |||||| ||||||    
T  6659773 ccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatc 6659825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 10854458 - 10854414
Alignment:
Q  142 aagtgcttatataagtagataagctcaaataaatcaatcaaaata 186  Q
    |||||||||||| |||| |||||||| |||||||||||| |||||    
T  10854458 aagtgcttatattagtaaataagctcgaataaatcaatccaaata 10854414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 12287263 - 12287199
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||||  |||||||| ||  |||||||   |||||||||||||| ||||||||||    
T  12287263 ctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaa 12287199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 12481582 - 12481646
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    |||||||||||||| ||||||||||||||| || |||  |  ||||||||| |||||||| ||||    
T  12481582 tttcataagttcttacaaagagtctcacaaatgattacgtgggtagataagttcaaataagtcaa 12481646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 15488954 - 15489006
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||| ||||| |||| ||| ||||||||||||||| | |||||||||||||||    
T  15488954 tatacgttgtcttcataagttatcctagagaacttgtagaaataagctgaaaa 15489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 28075806 - 28075842
Alignment:
Q  137 ctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  28075806 ctcacaagttcttatattagtagataagctcaaataa 28075842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 28689531 - 28689456
Alignment:
Q  33 tataaactataagttgttttcaca--agctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| |  ||||||| | || | |||||| |||||||||||||| |||||||| ||||    
T  28689531 tataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacat 28689456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 33975589 - 33975637
Alignment:
Q  59 ctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||||||| |||||| ||||||||||||||||  ||||| |||||    
T  33975589 ctatcctagagagcttatgaaaataagctgaaaatagtttatggacata 33975637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 39803963 - 39803915
Alignment:
Q  39 ctataagttgttttcacaa-gctatcctagagaacttatggaaataagc 86  Q
    |||||||||||||||| || |||||||||||||  ||||||||||||||    
T  39803963 ctataagttgttttcataatgctatcctagagattttatggaaataagc 39803915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 40394962 - 40394903
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    |||||| ||||||||||||||| || | |||||| ||| |||||| |||||||||||||||    
T  40394962 tataaattataagttgttttcataacc-atcctatagagcttatgaaaataagctgaaaat 40394903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 48748353 - 48748321
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaac 104  Q
    ||||||||||||||||||||| |||||||||||    
T  48748353 cttatggaaataagctgaaaacaacttatgaac 48748321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 49938747 - 49938799
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||| | |||||||  ||||||||||||| ||||||| ||||||    
T  49938747 tataagttgtttttataagctatattagagaacttatgaaaataagttgaaaa 49938799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 18628606 - 18628472
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtg 146  Q
    |||||||| ||| |||| | |||| ||||||||||||||||||||| |||||     |||||  || ||||||||| ||| ||||| |||||||||||||    
T  18628606 tgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt-----cataagttgttttcataagctctcccaaacagtctcacaagtg 18628512  T
Q  147 cttatataagtagataagctcaaataaatcaatcaaaata 186  Q
     |||| | ||||||||||||||||||  |||||| |||||    
T  18628511 tttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 29263371 - 29263437
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||||||||| ||||||||||  ||| ||| ||||||||||||||||| ||||||||||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacata 29263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 6466123 - 6466050
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||||||||| || ||||||| |||||||  ||||||||||||| |||||||| |||||||||||    
T  6466123 tataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaacat 6466050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 7694087 - 7694014
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||| |||||||| ||| |||||| ||||  |||||||||||||||||||| |||||||||||||    
T  7694087 tataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacat 7694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 35405940 - 35406013
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||| |||||||||| ||| |||||| |||| ||||||||| ||||||||||| | |||||||||||    
T  35405940 tataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacat 35406013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 50298598 - 50298659
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||||||||    
T  50298598 ataagtttttccaaacagtctcacaagtgcttatgtcagtagataagctaaaataaatcaat 50298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 24929492 - 24929559
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||| || || | ||||||| ||||||||||||||||||||| || ||||||||||    
T  24929492 ctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacat 24929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 1017111 - 1017173
Alignment:
Q  118 ataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||||||||||||||| ||||||||||||| |||| | ||||||| ||||||||||| ||||||    
T  1017111 ataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatc 1017173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 26747472 - 26747406
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||  || ||||||| |||||||||||||||||||| |||| | |||||||||||    
T  26747472 tataagttgttttcattagttatcctaaagaacttatggaaataagctaaaaaaagcttatgaacat 26747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 1137706 - 1137823
Alignment:
Q  34 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat-----aacatggtttcataagttcttc 128  Q
    |||| ||||||| || ||||| || |||||| ||||| ||||||||||||| ||||||| |||||||||||||     || ||| ||||||||||||| |    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcc 1137805  T
Q  129 caaagagtctcacaagtg 146  Q
     ||| ||| |||||||||    
T  1137806 taaacagtgtcacaagtg 1137823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 17822936 - 17822797
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa------cataacatggtttcataagttcttccaaa 132  Q
    |||||||||||||||| |||||||| | ||||||||||| ||||||||| |||| | ||||||||      |||||  || ||||||| ||||| | |||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaa 17822837  T
Q  133 gagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
     |||||||| ||  ||||| | |||||||||||||||||||    
T  17822836 tagtctcac-agaacttatgtcagtagataagctcaaataa 17822797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 49202638 - 49202754
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac------ataacatggtttcataagttct 126  Q
    ||||| |||||||||||||||  |||||||| | || |||| ||| ||||||| |||||| |||||||||||      ||||  |||||| |||||||||    
T  49202638 tataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttct 49202737  T
Q  127 tccaaagagtctcacaa 143  Q
    |||||| ||||||||||    
T  49202738 tccaaacagtctcacaa 49202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 8469445 - 8469381
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||| ||| ||  ||||||||| ||||||||||||||||||| |||||||||||||    
T  8469445 taagtttttttcataagttagtctagagaacctatggaaataagctgaaaacaacttatgaacat 8469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 11158427 - 11158375
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  11158427 tataagttgttttcataagctatcttagagagcttgtggaaataagctgaaaa 11158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 11264301 - 11264353
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaa 11264353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 42866061 - 42866173
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataac-----atggtttcataagttctt 127  Q
    ||||| |||||||||||||||| |||||||||| |||| ||||||||| |||||| |||  | |||||| ||||| |     ||| || ||||||||||     
T  42866061 tataagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacatatcatagaatgtttacataagttctc 42866160  T
Q  128 ccaaagagtctca 140  Q
    |||||||||||||    
T  42866161 ccaaagagtctca 42866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 49219132 - 49219200
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| |||||||||||||||| || ||||| || |||  |||||||||||||||||||| ||||||||    
T  49219132 tataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 5131304 - 5131253
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||| |||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaacaacttatggacata 5131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 30207648 - 30207589
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||||||||||||| |||||| | ||||||  ||||||||||||||||||||    
T  30207648 tataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaa 30207589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 36048526 - 36048593
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| ||||||| | |||||| |||||||| |||||| |||||||||||||||||| |||| |||||    
T  36048526 tataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagcttat 36048593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 42121481 - 42121539
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||| ||||||||||||||||  ||||||| | |||||||| ||||||||||||||||    
T  42121481 tataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa 42121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 2900333 - 2900390
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaa 90  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||||  ||||||||||||    
T  2900333 tataaactataagctgttttcacaagctatcatagagagattataaaaataagctgaa 2900390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 8468941 - 8469014
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||| ||||||||||| ||| ||| ||||||| |||||| |||||| ||||||| |||||||| ||||    
T  8468941 tataagctattagttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatggacat 8469014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 28614862 - 28614817
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||    
T  28614862 aagctatcctagagaacttatgaaaataagctgaaaagagcttatg 28614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 29601071 - 29601026
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||    
T  29601071 tgttttcatatgctatcctagagaacttatgaaaataagctgaaaa 29601026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 40174637 - 40174709
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||||| | ||||| ||||||||||   ||||| | ||||||||| |||||||||||||||||||||||    
T  40174637 tttcataagttatcccaaacagtctcacaaaa-cttatgttagtagataaactcaaataaatcaatcaaaatag 40174709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 51560280 - 51560215
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||| ||| ||||||||||||| ||||||||||   |||||||||||||| ||||| ||||    
T  51560280 tttcataaggtctcccaaagagtctcataagtgcttatgccagtagataagctcatataaagcaat 51560215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 22471353 - 22471401
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagata 162  Q
    ||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  22471353 tttcataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 32421032 - 32420976
Alignment:
Q  131 aagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    |||||||||||||||||||||   ||||| ||||||||||||| |||||| ||||||    
T  32421032 aagagtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaatag 32420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 42641524 - 42641424
Alignment:
Q  79 aaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    ||||||||||||||||  ||||||||||||  || |||||||||||||  |||| ||| ||| ||||| ||||   ||||| ||||| |||||||| |||    
T  42641524 aaataagctgaaaataggttatgaacataagctgttttcataagttctcgcaaacagtttcaaaagtgattatgacagtagttaagcacaaataaaccaa 42641425  T
Q  179 t 179  Q
    |    
T  42641424 t 42641424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 53673721 - 53673661
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    |||||||| |||||||| | |||| |||||| |||||||||||||| |||||||| |||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacata 53673661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 55084549 - 55084485
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||  ||||||| |||||| |||||| |||||||||||||  | |||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 55084485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 17884072 - 17884135
Alignment:
Q  44 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||||||||| |||||||  | |||| |||||| |||| ||||||||| ||||||||||||||    
T  17884072 agttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacata 17884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 41603465 - 41603418
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  41603465 aagctatcatggagcacttatggaaataagctgaaaatagcttatgaa 41603418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 46797113 - 46797152
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  46797113 agtctcacaagtgcttatacaagtaaataagctcaaataa 46797152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 10192284 - 10192349
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| |||||||||| |||| | |||| ||||||| |||||| |||||| ||||||    
T  10192284 tataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaaacaacttacgaacat 10192349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 20936306 - 20936232
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| ||||| |||||||||| |  ||||||| ||||  ||||||||||||| |||||| | ||||||||||||    
T  20936306 tataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacata 20936232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 21157852 - 21157906
Alignment:
Q  119 taagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||| ||||||||| ||||| |||||||||||| | ||||||| |||||||||||    
T  21157852 taagctcttccaaacagtcttacaagtgcttatgtcagtagatgagctcaaataa 21157906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 43824315 - 43824349
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||||||||| |||||||||||||    
T  43824315 cttatggaaataagctgaaaacaacttatgaacat 43824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 50746069 - 50746119
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||| ||||||||||||||||||  |||||||||| ||||||||| |||||    
T  50746069 caaatagtctcacaagtgcttatgcaagtagataaactcaaataagtcaat 50746119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 51044544 - 51044506
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataa 84  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  51044544 ttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 53943599 - 53943657
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||||||||||||||||| || ||| | || | |||| ||||||||||||||||||||    
T  53943599 tataaactataagttgtttacataagttgtcatggagagcttatggaaataagctgaaa 53943657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 1313236 - 1313273
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaat 171  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  1313236 agtctcacaagtgcttatacatgtagataagctcaaat 1313273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 8328110 - 8328045
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||| | ||||||| ||||||| ||||||||||   | |||||||||||||||| ||||||    
T  8328110 tttcataagctattccaaacagtctcataagtgcttatgccaatagataagctcaaatacatcaat 8328045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 18630673 - 18630722
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaat 82  Q
    ||||| |||||||||||||||||||||||||| | ||| |||||| ||||    
T  18630673 tataagctataagttgttttcacaagctatccaacagagcttatgaaaat 18630722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 19429725 - 19429770
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||||| |||| ||||||||||||||||||||| | ||||||    
T  19429725 aagctatcctggagagcttatggaaataagctgaaaacagcttatg 19429770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 20907340 - 20907413
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||  |||||||||||||||||||  |||||  ||| ||||||| |||||| ||||||| |||||    
T  20907340 tataagctataaactgttttcacaagctatcctgaagaaccaatgaaaataagttgaaaacaacttataaacat 20907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 22662283 - 22662250
Alignment:
Q  74 tatggaaataagctgaaaataacttatgaacata 107  Q
    ||||||||||||||||||||| ||||||||||||    
T  22662283 tatggaaataagctgaaaatagcttatgaacata 22662250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 24371024 - 24370971
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||||||||||| ||||||||||| | |  |||| |||||||||||||||    
T  24371024 ctataagttgttttcataagctatcctaaatagtttatagaaataagctgaaaa 24370971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 29563467 - 29563414
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||||| ||||||| ||||||||||| ||| |||||| |||||| |||||||    
T  29563467 tgttttcagaagctattctagagaacttgtgggaataagttgaaaacaacttat 29563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 31006025 - 31006070
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||| |||||||| |||| |||||| ||||||||||||||||    
T  31006025 tgttttcataagctatcatagataacttacggaaataagctgaaaa 31006070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 47970399 - 47970440
Alignment:
Q  138 tcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||||||||||||| | |||||||||||||||||||| ||||    
T  47970399 tcacaagtgcttatgtcagtagataagctcaaataaaccaat 47970440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 2978031 - 2977995
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  2978031 aagctatcctagaaaacttatgaaaataagctgaaaa 2977995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 8147899 - 8147931
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatgga 79  Q
    |||||||| ||||||||||||||||||||||||    
T  8147899 tgttttcataagctatcctagagaacttatgga 8147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 8422916 - 8422860
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctga 89  Q
    ||||| ||||||||||||||||||| ||||| | ||||  ||||| |||||||||||    
T  8422916 tataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 18019976 - 18020024
Alignment:
Q  44 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||| ||||||| |||||||  |||||||||||| |||||||    
T  18019976 agttgttttcataagctatgctagagagtttatggaaataaactgaaaa 18020024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23676974 - 23676930
Alignment:
Q  139 cacaagtgcttatataagtagataagctcaaataaatcaatcaaa 183  Q
    ||||||| |||||| ||||||||||| |||||||| |||||||||    
T  23676974 cacaagtacttatacaagtagataagttcaaataagtcaatcaaa 23676930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 23983969 - 23983909
Alignment:
Q  119 taagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    |||||||||  ||| ||| || ||||||| |||| |||||||||||||||||||| |||||    
T  23983969 taagttcttttaaacagtttcgcaagtgcctatacaagtagataagctcaaataagtcaat 23983909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 24160520 - 24160448
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaata 186  Q
    ||||||||||||  ||||| | |||||||||| |||||||  || ||||||||||||||| | |||| |||||    
T  24160520 tttcataagttcacccaaataatctcacaagtacttatatctgttgataagctcaaataagtaaatccaaata 24160448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 24169270 - 24169326
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||||||||||||| | |||| |||||| ||||||| |||||| | ||||||||    
T  24169270 tgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaa 24169326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 31038912 - 31038872
Alignment:
Q  65 tagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    |||||||||||| |||||||| |||||| ||||||||||||    
T  31038912 tagagaacttatagaaataagttgaaaacaacttatgaaca 31038872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 35507534 - 35507466
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| |||||||||||||||| |  |||||||| ||| |||||| || |||||| |||||| ||||||    
T  35507534 tataagctataagttgttttcatacactatcctaaagagcttatgaaagtaagctaaaaatagcttatg 35507466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 52734803 - 52734859
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataac 96  Q
    ||||||||||||||| |||||||| |  ||||| ||||||| |||||| ||||||||    
T  52734803 tataagttgttttcataagctatcatgaagaacatatggaactaagctaaaaataac 52734859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 53294185 - 53294121
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||| | || ||||  ||||||||||||| ||| |||||||||||| ||| ||||    
T  53294185 ctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaa 53294121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 55414491 - 55414427
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||| ||||||||| ||| |||| | ||||||||||| ||||||| |||||| | ||||||||    
T  55414491 ctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaa 55414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 33883823 - 33883754
Alignment:
Q  37 aactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||| ||||||| || |||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  33883823 aactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacat 33883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 22214736 - 22214663
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||||| |||||||||||||||  ||| |||||||||||||||| | |||||| ||||    
T  22214736 tataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacat 22214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 173
Target Start/End: Original strand, 41057179 - 41057293
Alignment:
Q  65 tagagaacttatggaaataagctgaaaataacttatgaacataacatg------gtttcataagttcttccaaagagtctcacaagtgcttatataagta 158  Q
    |||||||||||||  |||||||||||||||||||||||||||  || |       ||||| || |||| ||||| ||||||||||||||||||  | |||    
T  41057179 tagagaacttatgataataagctgaaaataacttatgaacatgtcacgagctatttttcacaaattctcccaaacagtctcacaagtgcttatgcatgta 41057278  T
Q  159 gataagctcaaataa 173  Q
    |||||||||||||||    
T  41057279 gataagctcaaataa 41057293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 45433010 - 45432943
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||||||||  |||||  ||| ||||||||||||||||||||| |||||||||||||    
T  45433010 ctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacat 45432943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 36189711 - 36189773
Alignment:
Q  117 cataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||| |||||| |||||||||||||||||||  |||| |||||||||||||| |||||    
T  36189711 cataagttcctccaaacagtctcacaagtgcttatactagtaaataagctcaaataagtcaat 36189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 21367667 - 21367732
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||||||||| | ||| ||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 24785198 - 24785271
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||  |||||||| |||||||||| |||| |||||| ||||||||| |||| |||||||||||||    
T  24785198 tataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacat 24785271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 39885541 - 39885598
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    |||||||||||| |||||||||||| || | ||| |||||||||||||||||||||||    
T  39885541 aagttgttttcataagctatcctagggagcatattgaaataagctgaaaataacttat 39885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 26330361 - 26330249
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaacataaca-----tggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 166  Q
    ||||||||||||| ||||||| ||| |||||||||  ||     || ||||||||| ||||| ||| |||||||||| | ||||| | ||||||||| ||    
T  26330361 cttatggaaataacctgaaaagaacctatgaacatgtcagaagttgttttcataagctcttctaaacagtctcacaaatacttatttcagtagataacct 26330262  T
Q  167 caaataaatcaat 179  Q
    |||||||||||||    
T  26330261 caaataaatcaat 26330249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 38975981 - 38975913
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| |||||||||||||||||||  || |||||||| |||||||||||||| |||| ||| ||||||    
T  38975981 tataagctataagttgttttcacaaaataacctagagagcttatggaaataagttgaatatagcttatg 38975913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 14548798 - 14548739
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||||||||||||| ||| ||| || |||| |||||||||||||||||||||    
T  14548798 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 37273141 - 37273200
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| |||||||| | ||||||||||||||||||| |||||| |||||||| ||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacat 37273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 41644515 - 41644452
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||| |||||||| |||||||| |||||| |||| |||||||||||||||| | ||||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaa 41644452  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 44488892 - 44488935
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaa 44488935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 49465730 - 49465583
Alignment:
Q  45 gttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac-----ataacatggtttcataagttcttccaaagagtctc 139  Q
    |||||||||| ||||||| || ||||||||||||||||||||| |||| | || ||||||     ||||  || ||||||||||||| | ||| | | ||    
T  49465730 gttgttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttctccgaaacaatatc 49465631  T
Q  140 acaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||||||   |||| |||| || |||||| |||||| ||||||    
T  49465630 acaagtgcttatggtagtaaataaactgaaataagtcaatccaaatag 49465583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 237397 - 237463
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| ||| ||||||| ||| |||| |||||||||||||||| | |||||| ||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacat 237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 1217870 - 1217804
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| |||||||||| ||||||||||| || |||| |||||| |||||||| ||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacat 1217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 12985408 - 12985354
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  12985408 tgttttcataagctatcctcaagaacttatggaaataagccgaaaacaacttatg 12985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 22667497 - 22667555
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    |||| |||||||||||||||||| | |||||||||||||||||||  ||||| ||||||    
T  22667497 caaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatag 22667555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 22724136 - 22724194
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    |||| |||||||||||||||||| | |||||||||||||||||||  ||||| ||||||    
T  22724136 caaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatag 22724194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 36887504 - 36887570
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| |||| ||| |  |||||||||| |||||||||||||| | |||||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacat 36887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 38462288 - 38462342
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||| ||||||||| ||| | ||||||||||||||||||||| ||||||||    
T  38462288 tgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatg 38462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 39602280 - 39602214
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| |||||||| | ||||||||||| ||||||| |||||| || ||||||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacat 39602214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 42734014 - 42733960
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct 87  Q
    ||||| ||||||||||||||||| ||||||| | |||| ||||||||||||||||    
T  42734014 tataagctataagttgttttcaccagctatcgtggagagcttatggaaataagct 42733960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 44284143 - 44284089
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  44284143 tgttttcataagctatcctggagagcttatagaaataagctgaaaatagcttatg 44284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 45590664 - 45590795
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctc 139  Q
    ||||||||||||||| ||| |||||  || || | ||||||||||| ||||||||||||||| || ||        ||||||| ||| ||||| ||||||    
T  45590664 tataagttgttttcataagttatccaggacaaatcatggaaataagttgaaaataacttatggactta--------tcataagctctcccaaacagtctc 45590755  T
Q  140 acaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||||||   |||||||||| ||||| || |||||    
T  45590756 acaagtgcttatgctagtagataagttcaaaaaagtcaat 45590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 51510270 - 51510216
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct 87  Q
    |||||||||||||||||||||| ||| |||| | |||| ||||||||||||||||    
T  51510270 tataaactataagttgttttcataagttatcgtggagagcttatggaaataagct 51510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 20195024 - 20194951
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||| |||  |||| |||||||||| |||||||  ||| ||||||| ||||||||||||||| ||||||    
T  20195024 tttcataagctctcacaaacagtctcacaactgcttatgcaagaagataagttcaaataaatcaatccaaatag 20194951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 25459616 - 25459555
Alignment:
Q  119 taagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||| ||||||||| | ||||||||||||||||   ||| ||||||||||||||||||||||    
T  25459616 taagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatc 25459555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 43115049 - 43115122
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||||||||||||  | ||||| | |||| ||||||||||||||||||||| || ||||| ||||    
T  43115049 tataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacat 43115122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 43875465 - 43875526
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| |||| ||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  43875465 tataagatgttctcataagctatcctggagaacttatggaaataatcagaaaacaacttatg 43875526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 23785248 - 23785316
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||| ||||||  |||||||||||||| || | |||| |||||||||| |||||||||| ||||||||    
T  23785248 tataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatg 23785316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 28881749 - 28881686
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaa 178  Q
    ||||||||| ||| ||||| | |||||||| |||| |||| ||||||||||||||||||||||||    
T  28881749 tttcataagctctcccaaataatctcacaaatgct-atatcagtagataagctcaaataaatcaa 28881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 45541580 - 45541716
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacat-----ggtttcataagttcttccaaagagtctcacaa 143  Q
    |||||| |||||||| | || ||||||||  ||||| ||||||| | |||||||||||  |||     | ||||||||||||||| ||| ||||| ||||    
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaa 45541679  T
Q  144 gtgcttatataagtagataagctcaaataaatcaatc 180  Q
    ||| |||||  | || |||||||||||||| ||||||    
T  45541680 gtgtttataccattaaataagctcaaataagtcaatc 45541716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 53789532 - 53789468
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||| ||| |||||||| | ||||||||||| || ||||||||||| | ||||||||    
T  53789532 ctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 20210904 - 20210853
Alignment:
Q  129 caaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||| ||||||||||||| |||| | ||||||||| ||||||||||||||||    
T  20210904 caaacagtctcacaagtggttatgtcagtagataacctcaaataaatcaatc 20210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 21872274 - 21872227
Alignment:
Q  126 ttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||| |||||||||||||||||| | |||||||||| ||||||||    
T  21872274 ttccaaacagtctcacaagtgcttatgtcagtagataagatcaaataa 21872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22203423 - 22203474
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataa 84  Q
    ||||| |||||||||||||||| |||||||| | ||||||||||| ||||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 24887360 - 24887301
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| ||| ||| |||||||| |||||||||| |||| ||||||| |||||||||||||    
T  24887360 tataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaa 24887301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 30657375 - 30657430
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||||||| | ||||| |||||||||| | ||||||||| |||||||||||||||    
T  30657375 tcttccaaacaatctcaaaagtgcttatgtcagtagataaactcaaataaatcaat 30657430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 31403440 - 31403511
Alignment:
Q  116 tcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||||||||| ||||| |||||  ||||| ||||| | ||||||||||||||| ||| |||||| ||||||    
T  31403440 tcataagttctcccaaatagtcttgcaagtacttatgttagtagataagctcaagtaagtcaatctaaatag 31403511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 50211814 - 50211873
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    |||||||||||||  |||| ||||| |||||||||||| | |||||||||||| ||||||    
T  50211814 tttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataa 50211873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 2719475 - 2719529
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||| |||||||| | ||||||||||| ||||||||||| || ||||||||    
T  2719475 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 18405821 - 18405756
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatc 180  Q
    |||||||||||||| |||| ||||||||||   ||||| | |||||||||||||||||||| |||||    
T  18405821 tttcataagttcttgcaaacagtctcacaaaa-cttatgtcagtagataagctcaaataaaccaatc 18405756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 20669172 - 20669238
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||||| |||||||| | |||| |||||| |||||||| ||||| | |||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacat 20669238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 36646452 - 36646386
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||| | |||||| ||||    
T  36646452 tataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacat 36646386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 52619003 - 52619069
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| ||||||||||||||||| |  ||| ||| || ||||||| |||||||| |||||||||||    
T  52619003 tataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacat 52619069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 21335677 - 21335722
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagct 87  Q
    |||| |||||||| ||||||| |||||||||||||| |||||||||    
T  21335677 taagctgttttcataagctatactagagaacttatgaaaataagct 21335722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 25075066 - 25075119
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    |||||| | |||||| |||||||| ||||||||| ||| |||||||||||||||    
T  25075066 tataagctcttttcataagctatcatagagaactaatgaaaataagctgaaaat 25075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 34610876 - 34610811
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||||||| ||||| |||||||| | | ||||||||| |||| |||||||||  |||||||||||    
T  34610876 tataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaaca 34610811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 34924612 - 34924547
Alignment:
Q  36 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||||| || | |||||| |||||||| |||||| |||||| |||||||||||||| ||| ||||    
T  34924612 aaactatgagctattttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatg 34924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 38318993 - 38319026
Alignment:
Q  73 ttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||||||||| |||||||||||    
T  38318993 ttatggaaataagctgaaaatagcttatgaacat 38319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 42753599 - 42753636
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagaga 70  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  42753599 tataagctataagttgtttttacaagctatcctagaga 42753636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 1816583 - 1816635
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||| ||||||| || |||| |||||  ||||||||||||||    
T  1816583 tataagttgttttcataagctatactggagagcttatcaaaataagctgaaaa 1816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 18405902 - 18405854
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagct 87  Q
    |||||||||||||||| |||||||| | ||||||||||| || ||||||    
T  18405902 ctataagttgttttcataagctatcttggagaacttatgaaattaagct 18405854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 24158572 - 24158528
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataag 85  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 25776116 - 25776180
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||||| ||| | || |  ||||||||||||| ||||||||||| | ||||||||    
T  25776116 ctataagttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagcttatgaa 25776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 28622070 - 28622006
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| |||||||| || ||||| | ||||||||||| |||||| ||||||| | ||||||||    
T  28622070 ctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 30956697 - 30956653
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaata 83  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30956697 ctataagttgttttcaaaagctatcttggagaacttatgggaata 30956653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 30972509 - 30972465
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaata 83  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30972509 ctataagttgttttcaaaagctatcttggagaacttatgggaata 30972465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 34254869 - 34254817
Alignment:
Q  49 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||| ||||||| || ||||||||||| ||||||||||||| || ||||||    
T  34254869 ttttcataagctattctggagaacttatgtaaataagctgaaagtagcttatg 34254817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 39980728 - 39980792
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    |||||||||||||| | |||||||  | ||||||||||| ||||||| |||||| | ||||||||    
T  39980728 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaa 39980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 40608432 - 40608388
Alignment:
Q  59 ctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||||    
T  40608432 ctatcctggagaacttatggaagtaagctgaaaacagcttatgaa 40608388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 44747479 - 44747427
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 91  Q
    ||||||| |||||||| |||||||| | || |||||||| |||||||||||||    
T  44747479 ctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 4006707 - 4006781
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 107  Q
    ||||| |||||||||||||||| |||||||||  ||||  ||||| ||||||||||||||||||||||| |||||    
T  4006707 tataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacata 4006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 7931854 - 7931800
Alignment:
Q  45 gttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 99  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  7931854 gttgttttcacaagctatcctatagagcttatggaaataagctgaaaacaactta 7931800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 281925 - 281858
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 100  Q
    ||||| ||||||| ||| |||| ||||||||||||||| || |||||||||||||||||| |||||||    
T  281925 tataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttat 281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 2112193 - 2112266
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||||||||||||||||| || ||||| |||||  ||||| ||||||| | ||||| |||||||||||||    
T  2112193 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 2112266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 7931790 - 7931730
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||| ||||||||||| ||| |||| |||||||||||||||| |||||| ||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacat 7931730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 13907578 - 13907650
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 105  Q
    ||||| |||||||||||||||| |||| ||| | ||||| ||||| |||||| ||||||||||||| ||||||    
T  13907578 tataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaaca 13907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 2117396 - 2117455
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||    
T  2117396 tataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaa 2117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 8010357 - 8010423
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||| | ||| |||||| |||||||||| ||||||| ||||||||| |||||||||||    
T  8010357 tataagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacat 8010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 20368250 - 20368184
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||| ||||| || | ||||||||||| ||||||| ||||| || |||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacat 20368184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 33498626 - 33498675
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataac 96  Q
    |||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  33498626 tgttttcacaagttatcctgaaaaacttatggaaataagctgaaaataac 33498675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 4420645 - 4420709
Alignment:
Q  42 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||| |||||  |||||||| | |||| ||||||||||||||||||||| | |||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacat 4420709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 33558615 - 33558543
Alignment:
Q  41 ataagttgttttcacaagctatcctaga-gaacttatggaaataagctg-aaaataacttatgaacataacat 111  Q
    ||||||| |||||| ||||||||||  | || ||||||||||||||||| ||||||||||||||| |||||||    
T  33558615 ataagtttttttcataagctatccttaatgagcttatggaaataagctggaaaataacttatgaatataacat 33558543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 769207 - 769290
Alignment:
Q  104 cataacatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||| |||||  | |||||| |||||| |||  ||||| ||||||    
T  769207 cataagatgttttcataagttcatccaaacagtctcacaagtgtttataccaatagatatgctcaactaagccaatctaaatag 769290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 1275142 - 1275201
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| ||||||| |||||||| | | |||||| |||| |||||||||||||||||||||    
T  1275142 tataagctataagctgttttcatatgttatcctggagagcttatggaaataagctgaaaa 1275201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 6647394 - 6647453
Alignment:
Q  47 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| |||||||| |||||| |||||| ||||||| |||||| | |||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacat 6647453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 9093633 - 9093574
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| ||||||| |||||||| ||||| || ||||||||||| | ||||||||||||||    
T  9093633 tataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 19800513 - 19800454
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| ||||||||| ||| || ||||||||||||| || ||||| ||||||||||||||    
T  19800513 tataagctataagttttttacataagctatcctagaaaaattatgaaaataagctgaaaa 19800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 26559230 - 26559171
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||||||||||||||||| |||||||||| |||||||   ||||| ||| |||||||||    
T  26559230 tttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataa 26559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 33385618 - 33385665
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaat 171  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||    
T  33385618 tcttccaaacagtttcacaagtgcttatatcagtagataagttcaaat 33385665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 35070450 - 35070399
Alignment:
Q  122 gttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    ||||| ||||| |||| ||||||||||||| | |||||||||||||||||||    
T  35070450 gttctcccaaacagtcccacaagtgcttatgttagtagataagctcaaataa 35070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 837287 - 837233
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 93  Q
    |||||||| |||||||  ||||||| | ||||||||||| |||||||||||||||    
T  837287 ctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 3181050 - 3180988
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaata 186  Q
    |||| |||| |||||||||||||||||| |  ||||||||| |||||||| |||| |||||||    
T  3181050 tctttcaaatagtctcacaagtgcttatgtctgtagataagttcaaataagtcaaccaaaata 3180988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 6536979 - 6537013
Alignment:
Q  72 cttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||||||||| |||||||||||||    
T  6536979 cttatggaaataagctgaaaacaacttatgaacat 6537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 8183145 - 8183211
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||||||||||||||||||||| ||||| | |||||| ||| | ||| |||| | |||||||||||    
T  8183145 tataagttgttttcacaagctattctagaaagcttatgaaaacaggctaaaaacagcttatgaacat 8183211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 25100043 - 25100097
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||||||||||||| |||||||| || ||| ||||| |||||||| ||||||||    
T  25100043 tataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaata 25100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 29957976 - 29957938
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaata 94  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  29957976 aagctattctagagagcttatggaaataagctgaaaata 29957938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 34430531 - 34430469
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 102  Q
    |||||| |||||||| |||||||| | ||||| ||||| |||||||||||||| | |||||||    
T  34430531 tataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 415297 - 415370
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||||||||| | |||||||  | ||||||||||||||  |||||||||| |  ||||||||||    
T  415297 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 415370  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 835320 - 835267
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||  ||||||| |||||||| | ||||||||||| ||||||||||||||    
T  835320 ctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 2727933 - 2727896
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagaga 70  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  2727933 tataagctataagttgttttcataagctatcctagaga 2727896  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 12111066 - 12111119
Alignment:
Q  134 agtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    |||||| |||||||||||   ||||||||||||||||||| |||||| ||||||    
T  12111066 agtctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaatag 12111119  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 17241329 - 17241256
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| ||||||||  ||||||  ||||||| | ||||  ||||||||||||| |||||| |||||||||||||    
T  17241329 tataatctataagtcattttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacat 17241256  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 34403856 - 34403921
Alignment:
Q  41 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 106  Q
    ||||| |||||||| ||||| | ||| ||| |||||||||||||| |||||| | |||||||||||    
T  34403856 ataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacat 34403921  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 2205654 - 2205610
Alignment:
Q  46 ttgttttcacaagctatcctagagaacttatggaaataagctgaa 90  Q
    ||||||||| |||||||| | |||| |||||||||||||||||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 3202024 - 3201956
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    ||||||||||||| | | |||| |||||||| | || ||| ||||| ||||||||||||| ||||||||    
T  3202024 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacaacttatg 3201956  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 9732476 - 9732528
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||||||||||||||||| |||||| ||||  |||| ||| |||||||||||    
T  9732476 tataagttgttttcacaagttatccttgagagtttatagaagtaagctgaaaa 9732528  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 10031808 - 10031860
Alignment:
Q  111 tggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataa 163  Q
    |||||||||| | |||| |||| |||||||||||||||||| | |||||||||    
T  10031808 tggtttcataggctctttcaaacagtctcacaagtgcttatgtcagtagataa 10031860  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 14492301 - 14492365
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 103  Q
    ||||||| |||||||| ||| |||||||||||  || ||||||| ||||||||| || |||||||    
T  14492301 ctataagctgttttcataagttatcctagagagtttgtggaaatcagctgaaaacaatttatgaa 14492365  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 18604652 - 18604616
Alignment:
Q  70 aacttatggaaataagctgaaaataacttatgaacat 106  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  18604652 aacttatgcaaataagctcaaaataacttatgaacat 18604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 31671151 - 31671087
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 97  Q
    ||||| ||||||| |||||||  || |||||||||| | |||||| |||||||||||||| ||||    
T  31671151 tataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 34405104 - 34405136
Alignment:
Q  33 tataaactataagttgttttcacaagctatcct 65  Q
    ||||| |||||||||||||||||||||||||||    
T  34405104 tataacctataagttgttttcacaagctatcct 34405136  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 160043 - 159905
Alignment:
Q  40 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaaga 134  Q
    |||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||   |||||  |     |||||  || || ||| |||||| | ||| |    
T  160043 tataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaactgcttatagacatgtcataaactgtttccattagttctccaaaata 159944  T
Q  135 gtctcacaagtgcttatataagtagataagctcaaataa 173  Q
    || ||||||||| |||||| |||||||||||||||||||    
T  159943 gtttcacaagtgtttatattagtagataagctcaaataa 159905  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 306329 - 306387
Alignment:
Q  43 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 101  Q
    |||||||||||| ||||||||||||||| |||||| || ||||||||||| | ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 9755 - 9696
Alignment:
Q  128 ccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaatcaaaatag 187  Q
    ||||| ||||||||||||  |||| | ||||||||| |||||||||||||||| ||||||    
T  9755 ccaaacagtctcacaagtatttatgttagtagataaactcaaataaatcaatctaaatag 9696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 178402 - 178343
Alignment:
Q  33 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 92  Q
    ||||| |||| || ||||||||||||| ||| | ||||||||||| ||||||||||||||    
T  178402 tataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaa 178343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 6021 - 6071
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaa 174  Q
    ||||||||| ||||||| ||||||||||  ||||||||||| |||||||||    
T  6021 tcttccaaacagtctcataagtgcttatgcaagtagataagatcaaataaa 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 4156 - 4092
Alignment:
Q  114 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataaatcaat 179  Q
    ||||| ||||||||||||| ||||||| ||||||||||   |||||| |||||||||||| |||||    
T  4156 tttcaaaagttcttccaaacagtctca-aagtgcttatgctagtagacaagctcaaataattcaat 4092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 3995 - 4043
Alignment:
Q  124 tcttccaaagagtctcacaagtgcttatataagtagataagctcaaata 172  Q
    ||||||||| |||||||||||||||||||| | || ||||| |||||||    
T  3995 tcttccaaacagtctcacaagtgcttatatcaatatataagttcaaata 4043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 17275 - 17323
Alignment:
Q  39 ctataagttgttttcacaagctatcctagagaacttatggaaataagct 87  Q
    |||||||||||||||| |||||||| | |||||||||| | ||||||||    
T  17275 ctataagttgttttcataagctatcttggagaacttatagcaataagct 17323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 27017 - 27053
Alignment:
Q  56 aagctatcctagagaacttatggaaataagctgaaaa 92  Q
    |||||||| |||||| |||||||||||||||||||||    
T  27017 aagctatcatagagagcttatggaaataagctgaaaa 27053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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