View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10728_3 (Length: 383)
Name: NF10728_3
Description: NF10728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10728_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 15 - 383
Target Start/End: Original strand, 47116765 - 47117118
Alignment:
| Q |
15 |
agatggacatcatcccaagcttcctcatacccttgttatttcatttccttatgatatctcnnnnnnnctgacattgttttgtttcatcgcttctcaggta |
114 |
Q |
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| T |
47116765 |
agatggacaccactccaagcttcctcatacccttgttatttcatttccttatgatatctctttttttctgacattgttttgtttcatcgcttctcaggta |
47116864 |
T |
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| Q |
115 |
attacaatagttatattttatcaaagatattcaataaccaatttcttttatatctttagtttcaattcaaggagataaatattcataccttttaacgatc |
214 |
Q |
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| T |
47116865 |
attacaatagttatattttatcaaagatattcaataaccaatttcttttatatctttagtttcaattcaaggagataaatattcataccttttaacgatc |
47116964 |
T |
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| Q |
215 |
aaatcacaaagcaaggtaagcaatatcaacgtatcaatgagatggacatcatcagatcgatcaccttttaacgattatttttaatttcttgttttgtaga |
314 |
Q |
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| T |
47116965 |
aaatcacaaagcaaggtaagcaatatcaacgtatcaatga---------------ctcgatcaccttttaacgattatttttaatttcttgttttgtaga |
47117049 |
T |
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| Q |
315 |
tggataggcggagaatgtatgataggcaacaaagctcaacgggaacgccaacatcaccatcttcgccgg |
383 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
47117050 |
tggataggcggagaatgtatgataggcaacaaagctcaacgggaacgccaacatcaccgtcttcaccgg |
47117118 |
T |
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