View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10728_high_1 (Length: 266)
Name: NF10728_high_1
Description: NF10728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10728_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 38877268 - 38877508
Alignment:
| Q |
11 |
cataggtgaaattgatcttcaatgcctgtaggccgtacaacttggaagccgtgagcgtctccttgctttttgtgaggctgttcagagaagctctcccgtg |
110 |
Q |
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| T |
38877268 |
cataagtgaaattgatcttcaatgcctgtaggccgtacaacttggaagccgtgagcgtctccttgctttttgtgaggctgttcagagaagctctcctgtg |
38877367 |
T |
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| Q |
111 |
gggtcatacaccaaaccaattgcgggtaccactcctggatatgcatcagaggtctgctctgattaaccttcacagcgcctaaacaaattgattatgtttt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38877368 |
gggtcatacaccaaaccaattgcgggtaccactcctggatatgcatcagaggtctgctctgattaaccttcacagcgcctaaacaaattgattatgtttt |
38877467 |
T |
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| Q |
211 |
ggtccttaaatgatgttcaatattactttgatatccaaagt |
251 |
Q |
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| T |
38877468 |
ggtccttaaatgatgttcaatattactttgatatccaaagt |
38877508 |
T |
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