View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10729_4 (Length: 563)

Name: NF10729_4
Description: NF10729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10729_4
NF10729_4
[»] chr7 (32 HSPs)
chr7 (30-547)||(12358390-12358910)
chr7 (103-281)||(5312679-5312858)
chr7 (90-272)||(3268868-3269051)
chr7 (127-277)||(18496631-18496782)
chr7 (102-281)||(30405637-30405815)
chr7 (120-281)||(24596897-24597059)
chr7 (90-281)||(29544548-29544741)
chr7 (90-249)||(20461573-20461733)
chr7 (104-281)||(1074495-1074674)
chr7 (104-277)||(9801772-9801946)
chr7 (90-250)||(1255137-1255299)
chr7 (102-217)||(17881457-17881572)
chr7 (104-281)||(23124943-23125122)
chr7 (122-281)||(20470703-20470864)
chr7 (104-282)||(9761308-9761487)
chr7 (102-281)||(7372461-7372640)
chr7 (104-202)||(8309005-8309103)
chr7 (90-181)||(7815352-7815443)
chr7 (226-281)||(21545720-21545775)
chr7 (131-212)||(7326834-7326915)
chr7 (121-247)||(7142158-7142286)
chr7 (90-281)||(22532538-22532729)
chr7 (102-165)||(4977831-4977894)
chr7 (227-281)||(14649663-14649717)
chr7 (124-176)||(2632436-2632488)
chr7 (102-173)||(37144961-37145032)
chr7 (142-192)||(2353229-2353279)
chr7 (90-172)||(21545803-21545885)
chr7 (127-217)||(4828857-4828945)
chr7 (226-281)||(7494863-7494917)
chr7 (104-171)||(10292797-10292864)
chr7 (428-500)||(24596560-24596632)
[»] chr8 (34 HSPs)
chr8 (90-280)||(29291800-29291990)
chr8 (102-261)||(30543802-30543962)
chr8 (103-281)||(5153800-5153979)
chr8 (94-281)||(6888086-6888271)
chr8 (115-282)||(14424705-14424873)
chr8 (102-271)||(28074555-28074724)
chr8 (90-192)||(10867017-10867119)
chr8 (90-281)||(28291994-28292185)
chr8 (102-281)||(11437460-11437641)
chr8 (102-275)||(30850999-30851173)
chr8 (90-204)||(27097771-27097887)
chr8 (101-202)||(28260263-28260364)
chr8 (107-202)||(31436525-31436620)
chr8 (121-281)||(16052170-16052332)
chr8 (90-192)||(24584707-24584810)
chr8 (121-277)||(24696641-24696799)
chr8 (117-208)||(12774810-12774902)
chr8 (160-281)||(13583413-13583535)
chr8 (90-281)||(32239316-32239509)
chr8 (121-182)||(35135416-35135477)
chr8 (127-281)||(22894425-22894579)
chr8 (140-281)||(28859132-28859275)
chr8 (91-181)||(5570136-5570226)
chr8 (90-183)||(41505530-41505623)
chr8 (90-277)||(12956518-12956698)
chr8 (90-281)||(28901243-28901426)
chr8 (162-208)||(12357574-12357620)
chr8 (162-208)||(12358702-12358748)
chr8 (121-175)||(13081938-13081992)
chr8 (101-202)||(16054334-16054436)
chr8 (129-187)||(31232124-31232182)
chr8 (90-147)||(28902118-28902175)
chr8 (226-281)||(11310149-11310203)
chr8 (452-513)||(27085121-27085181)
[»] chr5 (35 HSPs)
chr5 (102-281)||(20694681-20694861)
chr5 (78-281)||(26070491-26070695)
chr5 (101-281)||(7742763-7742944)
chr5 (90-274)||(24410830-24411015)
chr5 (90-273)||(25594593-25594778)
chr5 (121-209)||(25367654-25367742)
chr5 (138-281)||(11274223-11274368)
chr5 (123-277)||(18178162-18178319)
chr5 (90-277)||(16634075-16634264)
chr5 (98-281)||(26329963-26330146)
chr5 (117-204)||(30790832-30790919)
chr5 (138-277)||(11997790-11997932)
chr5 (102-250)||(19763817-19763964)
chr5 (90-281)||(17027556-17027748)
chr5 (90-280)||(24841782-24841973)
chr5 (90-203)||(19331540-19331651)
chr5 (104-192)||(29150890-29150977)
chr5 (90-281)||(20083494-20083688)
chr5 (90-173)||(25680625-25680708)
chr5 (164-281)||(30072218-30072337)
chr5 (102-267)||(15697245-15697410)
chr5 (121-192)||(16603596-16603668)
chr5 (90-228)||(15205672-15205811)
chr5 (90-181)||(18222522-18222613)
chr5 (106-172)||(23157792-23157858)
chr5 (126-281)||(16622570-16622717)
chr5 (104-277)||(22229847-22230021)
chr5 (227-281)||(17695356-17695410)
chr5 (130-202)||(22754963-22755036)
chr5 (163-203)||(24279598-24279638)
chr5 (163-203)||(24382576-24382616)
chr5 (226-281)||(18452705-18452760)
chr5 (426-540)||(19763414-19763529)
chr5 (457-540)||(11997407-11997491)
chr5 (121-173)||(24517414-24517466)
[»] chr3 (34 HSPs)
chr3 (90-281)||(21829026-21829218)
chr3 (102-281)||(11474887-11475068)
chr3 (92-281)||(23908164-23908354)
chr3 (121-281)||(19219104-19219266)
chr3 (90-261)||(26387758-26387930)
chr3 (90-181)||(8402545-8402636)
chr3 (90-247)||(26297778-26297934)
chr3 (91-191)||(30493249-30493349)
chr3 (127-281)||(18474236-18474391)
chr3 (170-277)||(26418829-26418937)
chr3 (102-255)||(33577775-33577930)
chr3 (77-281)||(13911281-13911478)
chr3 (101-281)||(19285139-19285319)
chr3 (115-203)||(26797221-26797308)
chr3 (124-281)||(25883166-25883324)
chr3 (121-181)||(2729613-2729673)
chr3 (226-272)||(19263809-19263855)
chr3 (119-277)||(25919369-25919519)
chr3 (129-201)||(27415236-27415309)
chr3 (102-173)||(5632536-5632607)
chr3 (230-281)||(10341957-10342008)
chr3 (115-182)||(16970293-16970360)
chr3 (226-277)||(16970628-16970679)
chr3 (104-176)||(4780687-4780759)
chr3 (122-173)||(10341856-10341907)
chr3 (102-181)||(27374446-27374525)
chr3 (90-159)||(1475297-1475366)
chr3 (104-161)||(12409501-12409558)
chr3 (90-202)||(12573319-12573432)
chr3 (90-202)||(13549783-13549896)
chr3 (427-500)||(19218757-19218830)
chr3 (91-176)||(23007065-23007150)
chr3 (120-164)||(4775719-4775763)
chr3 (121-181)||(21017937-21017997)
[»] chr1 (35 HSPs)
chr1 (124-281)||(25727802-25727961)
chr1 (124-281)||(25736210-25736369)
chr1 (122-281)||(31313613-31313773)
chr1 (101-281)||(26102097-26102278)
chr1 (123-281)||(11769887-11770047)
chr1 (91-281)||(27461074-27461266)
chr1 (102-281)||(26854213-26854391)
chr1 (105-281)||(52271138-52271315)
chr1 (131-281)||(25730464-25730616)
chr1 (77-276)||(15298768-15298968)
chr1 (90-277)||(30675513-30675701)
chr1 (115-269)||(34381762-34381920)
chr1 (90-281)||(15416866-15417059)
chr1 (90-266)||(21548677-21548854)
chr1 (90-272)||(18795210-18795393)
chr1 (105-281)||(19257699-19257874)
chr1 (122-281)||(18300896-18301057)
chr1 (90-201)||(25126509-25126620)
chr1 (119-281)||(25494382-25494536)
chr1 (95-281)||(30781794-30781981)
chr1 (90-280)||(26657505-26657696)
chr1 (90-173)||(12810351-12810434)
chr1 (90-201)||(18391111-18391222)
chr1 (177-281)||(25373862-25373967)
chr1 (101-181)||(13807747-13807827)
chr1 (124-281)||(23223475-23223635)
chr1 (90-136)||(25965414-25965460)
chr1 (91-181)||(50047211-50047301)
chr1 (104-191)||(25266329-25266417)
chr1 (233-281)||(31319504-31319552)
chr1 (226-281)||(9328334-9328388)
chr1 (226-281)||(23519662-23519716)
chr1 (226-281)||(50047341-50047396)
chr1 (90-202)||(8247630-8247743)
chr1 (155-219)||(1174000-1174064)
[»] chr6 (21 HSPs)
chr6 (122-281)||(26499740-26499900)
chr6 (78-281)||(9943043-9943247)
chr6 (119-277)||(16439516-16439675)
chr6 (125-268)||(12972291-12972435)
chr6 (129-281)||(9396500-9396652)
chr6 (90-244)||(24617541-24617695)
chr6 (179-277)||(33638402-33638501)
chr6 (121-173)||(16527950-16528002)
chr6 (115-281)||(14924311-14924478)
chr6 (117-180)||(20495790-20495853)
chr6 (226-281)||(30355483-30355538)
chr6 (121-201)||(32930447-32930527)
chr6 (101-182)||(1755555-1755636)
chr6 (135-208)||(22559181-22559253)
chr6 (101-281)||(26512672-26512852)
chr6 (101-281)||(26517788-26517968)
chr6 (233-277)||(33638259-33638303)
chr6 (230-281)||(24618053-24618104)
chr6 (122-173)||(30355386-30355437)
chr6 (90-204)||(14768240-14768354)
chr6 (90-201)||(15998540-15998652)
[»] chr4 (34 HSPs)
chr4 (77-275)||(26159772-26159971)
chr4 (131-281)||(33519100-33519251)
chr4 (79-276)||(10576471-10576669)
chr4 (138-281)||(31859794-31859938)
chr4 (104-278)||(9288253-9288428)
chr4 (129-266)||(29437539-29437677)
chr4 (92-282)||(17339706-17339897)
chr4 (101-208)||(21167769-21167876)
chr4 (126-282)||(15192268-15192425)
chr4 (102-281)||(23353664-23353839)
chr4 (91-281)||(25315125-25315316)
chr4 (130-281)||(5676268-5676421)
chr4 (90-275)||(47024665-47024842)
chr4 (146-282)||(13064511-13064648)
chr4 (138-281)||(17187252-17187394)
chr4 (126-281)||(19601863-19602019)
chr4 (90-281)||(13275635-13275830)
chr4 (77-165)||(24925821-24925909)
chr4 (98-277)||(46647233-46647412)
chr4 (127-281)||(34864189-34864342)
chr4 (121-192)||(22119706-22119777)
chr4 (90-279)||(27302807-27302996)
chr4 (121-281)||(17026590-17026751)
chr4 (94-192)||(10320202-10320301)
chr4 (90-201)||(21077262-21077373)
chr4 (230-281)||(22119791-22119842)
chr4 (154-204)||(13206647-13206697)
chr4 (101-202)||(4732790-4732891)
chr4 (234-277)||(5906660-5906703)
chr4 (226-277)||(7024116-7024167)
chr4 (101-192)||(20044218-20044309)
chr4 (162-204)||(12243698-12243740)
chr4 (115-181)||(18444304-18444370)
chr4 (148-192)||(30624953-30624997)
[»] chr2 (33 HSPs)
chr2 (90-277)||(17152182-17152371)
chr2 (90-281)||(21848967-21849158)
chr2 (125-281)||(31262063-31262218)
chr2 (102-268)||(19541078-19541245)
chr2 (90-281)||(18236196-18236388)
chr2 (101-281)||(24047422-24047604)
chr2 (90-281)||(30998800-30998992)
chr2 (122-281)||(39730508-39730668)
chr2 (104-281)||(21505032-21505211)
chr2 (101-280)||(15454433-15454605)
chr2 (138-281)||(27417156-27417301)
chr2 (170-281)||(14921932-14922044)
chr2 (138-280)||(17415058-17415201)
chr2 (106-174)||(27917985-27918053)
chr2 (101-279)||(18117023-18117201)
chr2 (101-281)||(18818737-18818923)
chr2 (102-201)||(17240831-17240928)
chr2 (90-281)||(35707832-35708024)
chr2 (418-540)||(15454025-15454146)
chr2 (102-281)||(24188007-24188190)
chr2 (102-182)||(34063839-34063919)
chr2 (119-170)||(30705260-30705311)
chr2 (102-201)||(22388732-22388827)
chr2 (235-281)||(31274131-31274177)
chr2 (98-192)||(31449994-31450088)
chr2 (104-173)||(1733143-1733212)
chr2 (457-498)||(24188515-24188556)
chr2 (121-186)||(32276503-32276568)
chr2 (104-172)||(21843006-21843074)
chr2 (105-165)||(28278434-28278494)
chr2 (90-201)||(35031731-35031843)
chr2 (229-275)||(17884542-17884588)
chr2 (166-265)||(1732656-1732756)
[»] scaffold0171 (1 HSPs)
scaffold0171 (104-281)||(21440-21619)
[»] scaffold0188 (1 HSPs)
scaffold0188 (122-281)||(26848-27009)
[»] scaffold0190 (1 HSPs)
scaffold0190 (102-181)||(11692-11771)
[»] scaffold0386 (3 HSPs)
scaffold0386 (227-281)||(11692-11746)
scaffold0386 (121-203)||(13043-13126)
scaffold0386 (457-502)||(11322-11367)
[»] scaffold0065 (1 HSPs)
scaffold0065 (145-203)||(12328-12387)
[»] scaffold0011 (1 HSPs)
scaffold0011 (115-158)||(228202-228245)
[»] scaffold1026 (1 HSPs)
scaffold1026 (102-192)||(1817-1907)
[»] scaffold0282 (1 HSPs)
scaffold0282 (227-281)||(22507-22560)
[»] scaffold0113 (1 HSPs)
scaffold0113 (127-183)||(47813-47869)


Alignment Details
Target: chr7 (Bit Score: 467; Significance: 0; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 30 - 547
Target Start/End: Complemental strand, 12358910 - 12358390
Alignment:
Q  30 gctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttctcatttgagtcg 126  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||    
T  12358910 gctttttgttattttctttgcataagaagacaaatatgtggtcacatagaggagttgtccaatgtttgagaaatattttgtatttttctcatttgagtcg 12358811  T
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12358810 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag 12358711  T
Q  227 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaattgaagggcatggcctcatgcgccaaggcatatggccttatgcgcc 326  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12358710 atcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatagaagggcatggcctcatgcgccaaggcatatggccttatgcgcc 12358611  T
Q  327 taggcacatttgtgcggcaaaatgtaattttgcttgtttttaatgctggattgaaggaaaaagtcttgttcttctcactcgacctccaagcaatgataaa 426  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  12358610 taggcacatttgtgcggaaaaatgtaattttgcttgtttttaatgctggattgaaggaaaaagtcttgttcttgtctcttaacctccaagcaatgataaa 12358511  T
Q  427 ctataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatcaaaacatcaagacatagggttttctcc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12358510 ctataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatcacaacatcaagacatagggttttctcc 12358411  T
Q  527 tccccttgttctctatatgat 547  Q
    |||||||||||||||||||||    
T  12358410 tccccttgttctctatatgat 12358390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 103 - 281
Target Start/End: Complemental strand, 5312858 - 5312679
Alignment:
Q  103 tttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 202  Q
    |||||||| || |||||||||||||||||||||| ||||||| || | ||| ||||| ||||||||||||||||||||||||||| |||| || ||||||    
T  5312858 tttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttttagtgataaatcatgtaaatc 5312759  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || |||   ||| |||   |||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  5312758 ggcaaaaataaacatcaagtgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaat 5312679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 90 - 272
Target Start/End: Complemental strand, 3269051 - 3268868
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || |||||||||| || || ||||||| ||||||||||| |||||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  3269051 gtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaacttcgtatgtgttttaagtctttttagtgaga 3268952  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggttttt 272  Q
    ||| || |||||||| ||| ||| |||||  ||||| ||||||| ||||||||| |||| || |||| |||||| ||| |||||    
T  3268951 aatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagcttttt 3268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 18496631 - 18496782
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa- 225  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| || ||| |||||| || || |||||||||||| |   | |||   ||||     
T  18496631 ttgtaattcatttttatcctaaatcatgcgacttcataggtgttttgagcctatttggtgagatatcatgtaaatcggaaaaacgggacatcgagtgaag 18496730  T
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| |||||||    
T  18496731 gatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaaga 18496782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 30405637 - 30405815
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || | |||||| || |||||||||| ||| |||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || |||||    
T  30405637 ttttgtattgtttttatttgactcattgtaattcacttt-atcctaaaccatgcaactccataggtgttttgagt-tttttagtgagaaatcatgtaaat 30405734  T
Q  202 cggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| |||  || | ||| | ||||| ||| |||||||||||||||||| | |||| |||||||||||| |||||| |||||    
T  30405735 cggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaat 30405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 24597059 - 24596897
Alignment:
Q  120 tgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    ||||||||||||||||| |||||||||||||||| ||||| | |||||||||| |||||||||||||||||||  | |||||||| ||| ||| | |||     
T  24597059 tgagtcgttgtaattcaattttatcctaaatcatgcaactccgtaggtgttttaagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatca 24596960  T
Q  220 tat-gaagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
      | ||||||| ||||||| |||||||||| | | |||||| ||||||   ||||||||||||    
T  24596959 cgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaat 24596897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 29544548 - 29544741
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgag 188  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||| ||||||||  | ||| | |||| ||||||||||| ||||| ||| ||    
T  29544548 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcacttttctcctaaattgtgcaattccataagtgttttgagtgttttttagtaag 29544647  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||| || |||||||  ||| ||| | |||  |||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29544648 gaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 29544741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 20461733 - 20461573
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || | |||||||| || ||||| |||||||||||| ||| ||| |||||||||||  |||| | |||||||||| |||||||||||||||||    
T  20461733 gtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaacatgataggtgtttcgagtctttttagtgaga 20461634  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaaga 249  Q
    ||| || |||||||| |||  || | |||   |||| ||||||||||||||||||||||||    
T  20461633 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaaga 20461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 281
Target Start/End: Original strand, 1074495 - 1074674
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc-tttttagtgagaaataatataaatc 202  Q
    ||||||| || ||||| || || ||||||||   ||||||||||||| || ||||| |||| |||||||| ||| ||||||||||||||| || |||||     
T  1074495 ttgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgttttgtgtcttttttagtgagaaatcatgtaaatt 1074594  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||||| | |||   | || ||||||||||||||| ||||||||  ||||||||||| |||||| |||||||||||    
T  1074595 ggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaagacaat 1074674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 277
Target Start/End: Complemental strand, 9801946 - 9801772
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt-ttagtgagaaataatataaatc 202  Q
    |||||||||| ||| |  ||||||||||||||| |||||||||| || || ||| | |||||||||||||||| |||  |||||| |||| || ||||||    
T  9801946 ttgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatc 9801847  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |  ||| ||||| ||| | |||| ||||||||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  9801846 gacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 250
Target Start/End: Complemental strand, 1255299 - 1255137
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| ||||  ||||||| || ||| | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || |||     
T  1255299 gtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgcaacttcataggtgttttgagtgttttgtaatgaa 1255200  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagat 250  Q
    |||| || ||||||   ||| ||||| |||  ||||| ||||||||||| ||||| |||||||    
T  1255199 aaattatttaaatcaacaaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagat 1255137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 17881572 - 17881457
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||| || || |||||||| | ||||||| |||||||| |||||| |||||| |||||||||||||||||||||| | || |||||    
T  17881572 ttttgtattattttcattcgaatcattgtaatttaattttatcataaatcatgcaacttaataggtattttgagtctttttagtgagaagtcatgtaaat 17881473  T
Q  202 cggaaaagcaaaatat 217  Q
    ||||||| ||| ||||    
T  17881472 cggaaaaacaagatat 17881457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 281
Target Start/End: Original strand, 23124943 - 23125122
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 202  Q
    ||||||| || ||| | ||||||||||||||||  ||||||| ||||||| |||||  ||||||||||||||| |||| ||||||||||| || ||||||    
T  23124943 ttgtattgttttcactcgagtcgttgtaattcacatttatccaaaatcatacaactctataggtgttttgagtgttttctagtgagaaatcatgtaaatc 23125042  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |   || ||| | ||| | |||| |||| |||||||||||||||||| | ||||||||||| ||| || || ||||||||    
T  23125043 gaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattcttaaagacaat 23125122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 20470864 - 20470703
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatctt 220  Q
    ||||||||||||||| ||| | |||||||||| || || ||||| |||||||||| |||| |||||| |||  || |||||||  ||| ||| | |||      
T  20470864 agtcgttgtaattcactttcagcctaaatcatgcatctgcatagctgttttgagtgttttatagtgataaagcatgtaaatcgacaaatcaagacatcgc 20470765  T
Q  221 atgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||| |||||||||| |||| ||||||| | |||||||||||||||||| |||||||||||    
T  20470764 atgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaat 20470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 282
Target Start/End: Complemental strand, 9761487 - 9761308
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 202  Q
    |||||||||| ||| |  ||||||||||||||| |||||||||| || || ||| | |||||||||||||||| |||  |||||| |||| || ||||||    
T  9761487 ttgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatc 9761388  T
Q  203 ggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 282  Q
    |  ||| ||| | |||   ||||| |||||||||||||||||||||| | ||||||||||| ||||||||| |||| ||||    
T  9761387 gacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatt 9761308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 7372640 - 7372461
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatc-ctaaatcattcaacttcataggtgttttgagt-ctttttagtgagaaataatataa 199  Q
    ||||||||| || ||||| |||||||||||||||| ||||||| | ||||||| |||||||||||||||||| |||  |||||||||||||||  | |||    
T  7372640 ttttgtattgttttcattcgagtcgttgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttttagtgagaaatcttgtaa 7372541  T
Q  200 atcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| | ||| ||| |||||  ||||| |||||||||||| ||| | |||| | ||| | ||||||||| ||||| ||||||||    
T  7372540 atcagcaaatcaagatatc--atgaaggatcaaggatataaagctggaagttcaat-gatcttagaagatttttaaagacaat 7372461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 8309103 - 8309005
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 202  Q
    ||||||| || ||||||||||| |||| ||| | |||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||| || ||||||    
T  8309103 ttgtattgttttcatttgagtcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttttagtaagaaatcatgtaaatc 8309005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 7815352 - 7815443
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    |||| ||||| || |||||||||| ||| | | || ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  7815352 gtttaagaaacatattgtatttttttcactcgggtggttgtaattcagttttattctaaatcatgcaacttcataggtgttttgagtgtttt 7815443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 21545775 - 21545720
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  21545775 gatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaat 21545720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 7326915 - 7326834
Alignment:
Q  131 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaa 212  Q
    |||||| ||| ||||  |||||| |||||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||    
T  7326915 aattcagtttcatccctaatcatgcaacttgataggtgttttgagtcattttagtgagaaatcatataaatcagcaaagcaa 7326834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 7142158 - 7142286
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||||||||||||||| |||||||| | ||||| ||||| |||||||||||| ||| |||| ||||||||||| || |||||||  ||| ||| | |||     
T  7142158 gagtcgttgtaattcacttttatccaagatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatca 7142257  T
Q  220 tatgaa-gatcaaggatatgaagattgaa 247  Q
      |||| |||||| |||||||||||||||    
T  7142258 cgtgaaggatcaaagatatgaagattgaa 7142286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 22532729 - 22532538
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaa--tcattcaacttcataggtgttttgagtctttttagtga 187  Q
    ||||||| || ||||| |||| || ||||| || ||| | ||||||| ||||||||||||  ||||  ||||| ||  ||||| ||||| ||||||||||    
T  22532729 gtttgaggaacattttctattgttttcattggattcgctataattcacttttatcctaaaaatcatggaacttgat--gtgttatgagtatttttagtga 22532632  T
Q  188 gaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||| || |||||||| ||| ||| | |||  |||| | ||| |||||| ||||| |||| || |||||||||||||| |||||||||||||||    
T  22532631 gaaatcatgtaaatcggcaaa-caagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaat 22532538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 4977894 - 4977831
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 165  Q
    |||||||||||| |||||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  4977894 ttttgtatttttatcattcaagtcgttgtaattcacttttatcctaaattatgcaacttcatag 4977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 14649663 - 14649717
Alignment:
Q  227 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaat 14649717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 2632488 - 2632436
Alignment:
Q  124 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  2632488 tcgttgtaattcagttttatccaagatcatgcaacttcataggtgttttgagt 2632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 37144961 - 37145032
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||||| || |||||  ||||||||||||  |||||||||||||||||| ||||| | |||||||||||    
T  37144961 ttttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgttttg 37145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 2353279 - 2353229
Alignment:
Q  142 atcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||||||||||    
T  2353279 atcctaaatcatgcaactccataggtgttttgggcctttttagtgagaaat 2353229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 21545885 - 21545803
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 172  Q
    ||||||| || || ||||||| || ||| | |||||||||||| ||| |||||||||||||||| ||||| ||||||| ||||    
T  21545885 gtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacataggtttttt 21545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 4828857 - 4828945
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatat 217  Q
    |||||||| | |||||||||||||||| ||||| ||||| ||  ||||||||||||| |||||||| || || |||| |||| ||| ||||    
T  4828857 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatat 4828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 7494863 - 7494917
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||||||||||||||| | |||||||||||||||||   ||||||||||    
T  7494863 gatcaaggatatgaagattgaag-ttaatggttcttagaaggtccatgaagacaat 7494917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 10292797 - 10292864
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttt 171  Q
    |||||||||| ||| | |||||||||||||||| |||||||| | ||||| ||||  |||||||||||    
T  10292797 ttgtatttttttcaatcgagtcgttgtaattcagttttatccaagatcatgcaacaccataggtgttt 10292864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 24596632 - 24596560
Alignment:
Q  428 tataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatca 500  Q
    |||||| | |||||||||  ||| |||| ||||||||| |||||| | |||||||| ||||||||||| ||||    
T  24596632 tataaatagagaccattgcacactcttttattcattcagaaagctgatggtacaaggcaagggtcaagcatca 24596560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 90 - 280
Target Start/End: Original strand, 29291800 - 29291990
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| ||| |||| ||||||| ||||||||||||||||||| || |||||||||||||||| |||||| ||| || ||||||||||||||||| |||    
T  29291800 gtttgaggaattttttatattttt-tcatttgagtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttgagtctttttagtaaga 29291898  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 280  Q
    ||| || |||||||| ||| ||| |||||   ||||| ||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  29291899 aatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaa 29291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 30543802 - 30543962
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || |||||||||| ||||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| ||||||||| || |||||    
T  30543802 ttttgtattgttttcatttgagttgttgtaattcacttttatcctaaatcatgcaattatataggtgttttgagtctttttggtgagaaatcatgtaaat 30543901  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttctt 261  Q
    ||| ||| ||| |||||  ||||| |||  |||||||||||||||||| | ||||||||||    
T  30543902 cggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctt 30543962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 281
Target Start/End: Original strand, 5153800 - 5153979
Alignment:
Q  103 tttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 202  Q
    |||||||| || ||||| ||||| |||||||||| ||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| || |||||     
T  5153800 tttgtattattttcattcgagtcattgtaattcagttttatcttaaatcattcaactcgataggtgttttgagtctttttagtaagaaatcatgtaaata 5153899  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || ||| ||| | ||    |||| |||| |||||||||||||||||||| |||| || || |||||||||||||||||||    
T  5153900 ggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaat 5153979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 94 - 281
Target Start/End: Complemental strand, 6888271 - 6888086
Alignment:
Q  94 gagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaata 193  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| || ||||||||||||| ||||| |  |||||||||||||| ||||||||||||||     
T  6888271 gagaaacattttgtattttt-tcatttgagtcattgtaattcagttctatcctaaatcatgcaactcc--aggtgttttgagtcattttagtgagaaatc 6888175  T
Q  194 atataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || ||||||   ||| ||||  |||   || || ||| |||||||||||||||||||| ||||||||||| || || ||||||||||||    
T  6888174 atgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaat 6888086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 14424873 - 14424705
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 214  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||  || ||||||||||||||| || |||||||| ||| ||| |    
T  14424873 tcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgttttaggtttttttagtgagaaatcatgtaaatcggcaaaacaaga 14424774  T
Q  215 tatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 282  Q
     | |    ||| |||  | |||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  14424773 caacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaatt 14424705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 102 - 271
Target Start/End: Original strand, 28074555 - 28074724
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||||    
T  28074555 ttttgtattgttttcatt-gagtcgttgcaattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttttagtgagaaatcatgtaaat 28074653  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttt 271  Q
      | ||| ||| | |||  ||||| ||||||||||||||||| ||||||| | |||| ||||  |||||||    
T  28074654 atgcaaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggtttt 28074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 10867017 - 10867119
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||| |||||||  ||||||| ||||| || ||||| ||||| ||||||||||||||    
T  10867017 gtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactccaaaggtgctttgaatctttttagtgaga 10867116  T
Q  190 aat 192  Q
    |||    
T  10867117 aat 10867119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 28292185 - 28291994
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || ||||| | || || |||||||||| ||| ||||||| ||||||||||| | || |||||||| | |||||||| || ||||||||||||    
T  28292185 gtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgttttgtgtttttttagtgaga 28292086  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    | | || |||||||  |||  || | |||  |||||| ||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28292085 a-tcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaat 28291994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 11437460 - 11437641
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||||| || || ||||| |||||||| ||||||| ||| ||| ||  |||| ||||| |||| || |||||||||||||||||||||||| || |||||    
T  11437460 ttttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtctttttagtgagaaatcatgtaaat 11437559  T
Q  202 cggaaaagcaaaatatcttatgaa--gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| ||| ||| | |||   ||||  ||||||||||||||| ||||||| | |||||||||||||||   ||||||||||||    
T  11437560 cggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaat 11437641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 30851173 - 30850999
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||| |||| || ||||| || |||||||||||||  ||||||||||||||| |||||  ||||||||||||  ||| | |||||||||||  | |||||    
T  30851173 ttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgttttggatctatctagtgagaaatcgtgtaaat 30851074  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    |   ||||||| | ||||  |||| ||||||||||||||||||||||||| || ||||||||||| || ||||||    
T  30851073 catcaaagcaagacatctagtgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaa 30850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 27097887 - 27097771
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc--tttttagtga 187  Q
    ||||||| || || ||| ||| || |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||  ||||  ||||||||||    
T  27097887 gtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgtttaaagtctttttttagtga 27097788  T
Q  188 gaaataatataaatcgg 204  Q
    ||||| || ||||||||    
T  27097787 gaaatcatgtaaatcgg 27097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 28260364 - 28260263
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || |||||| ||||||||||||| |  |||||||||||||||   ||| |||||||||||||||||||||||||||||||| || ||||    
T  28260364 attttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaa 28260265  T
Q  201 tc 202  Q
    ||    
T  28260264 tc 28260263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 31436525 - 31436620
Alignment:
Q  107 tatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 202  Q
    ||||||| ||||| |||||  ||||||| | |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||    
T  31436525 tatttttttcattcgagtcagtgtaatttagttttatcctaaatcatgcaactacataggtgttttgaatctttttagtgagaaatcatgtaaatc 31436620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 281
Target Start/End: Complemental strand, 16052332 - 16052170
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||||||| |||||||  |||| | |||||||| |||||  ||||||||||||||| |||| ||||||||||| || ||||||   ||| ||| | |||     
T  16052332 gagtcgttataattcacatttaccttaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatca 16052233  T
Q  220 tatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     |||||| || ||||||||||||||| ||||  |||| |||||||||||||||||||||||||    
T  16052232 catgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaagacaat 16052170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 24584810 - 24584707
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| ||| ||||||||| || ||||| ||||| |||||||||||||||||| |||||||| |||||  |||||| |||||||| |||| |||||||    
T  24584810 gtttgaggaattttttgtattgttttcattcgagtcattgtaattcatttttatcataaatcatgcaactctataggtattttgagttttttgtagtgag 24584711  T
Q  189 aaat 192  Q
    ||||    
T  24584710 aaat 24584707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 24696641 - 24696799
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||||||||||||| | || ||||||||||||| ||| |||| ||||||||| ||| |||| |||| |||||| || ||||||   ||| ||| | |||     
T  24696641 gagtcgttgtaatttacttctatcctaaatcatacaatttcacaggtgtttttagtgttttatagtaagaaatcatgtaaatcaacaaatcaagacatca 24696740  T
Q  220 tatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
     || ||| |||||||||||||||||||||||  | | ||||||||||||||||||||||    
T  24696741 cataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaaga 24696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 12774902 - 12774810
Alignment:
Q  117 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt-ctttttagtgagaaataatataaatcggaaaa 208  Q
    ||||||||| |||||||| | |||||||||||||||| |||   |||||||||||| ||| ||||||||| ||||||||| ||||||||||||    
T  12774902 atttgagtcattgtaatttagttttatcctaaatcatgcaataccataggtgtttttagtactttttagtaagaaataatgtaaatcggaaaa 12774810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 13583535 - 13583413
Alignment:
Q  160 tcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggtt 258  Q
    |||||| || ||||||||||||||||||||||| || |||||||  ||| ||| | |||   ||||| ||| ||||||||| |||||||| | |||||||    
T  13583535 tcatagttggtttgagtctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggtt 13583436  T
Q  259 cttagaaggtttttgaagacaat 281  Q
    |||||||| | ||||||||||||    
T  13583435 cttagaagatatttgaagacaat 13583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 32239316 - 32239509
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || | | ||||||||||| |||||| ||||||| |||||||| ||||| ||||  |||||||||| |||| |||||||    
T  32239316 gtttgagtaacatattgtattgtttttacttgagtcgttgcaattcacttttatcttaaatcatgcaactccataaatgttttgagtgttttgtagtgag 32239415  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||  | ||||| |  ||| | | | |||  ||||| ||| ||||||||||||||||||| | ||||||| ||| |||||| || ||||||||    
T  32239416 aaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttcttaaagacaat 32239509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 35135477 - 35135416
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 182  Q
    ||||| ||||||||||||||||||||||||||| ||||| || | |||||||||||||||||    
T  35135477 gagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgagtcttttt 35135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 281
Target Start/End: Complemental strand, 22894579 - 22894425
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 225  Q
    |||| ||||| ||||||| || ||||||||||| ||||||| |||| ||| || | ||||||||||| || ||||||| |||| ||| |||||  |||||    
T  22894579 ttgtgattcacttttatcttagatcattcaactccataggtatttttagtgttctatagtgagaaatcatgtaaatcg-aaaatcaagatatcacatgaa 22894481  T
Q  226 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    | ||||| ||||| |||||||||  | ||| ||||||||| ||||||||||||||||    
T  22894480 ggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaagacaat 22894425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 28859275 - 28859132
Alignment:
Q  140 ttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatat 237  Q
    |||||||||||||  ||||  |||| ||||||||||  |||| |||| |||||| || ||||| |  ||| | ||| |||  ||||| ||||||||||||    
T  28859275 ttatcctaaatcacgcaacaccatatgtgttttgagggttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatat 28859176  T
Q  238 gaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     |||||| ||||| ||||||||||||| ||||||||||||||||    
T  28859175 caagattaaagatcaatggttcttagatggtttttgaagacaat 28859132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 5570226 - 5570136
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    |||||| || || ||||||| || ||| | |||| ||||||||||| |||||||||| ||||| ||||||| |||||||||||||| ||||    
T  5570226 tttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaacttcgtaggtgttttgagtgtttt 5570136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 41505623 - 41505530
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta 183  Q
    ||||||| ||||||||||||| || ||||| |||| ||||||||||| ||| || |  |||||| |||||||||||  || |||||||||||||    
T  41505623 gtttgaggaatattttgtattattttcattcgagttgttgtaattcactttcatacctaatcatgcaacttcatagacgtgttgagtcttttta 41505530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 277
Target Start/End: Original strand, 12956518 - 12956698
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || || ||||||| || ||| | ||||| | |||||||| ||||||||||||||||  ||||  ||||||||||||        ||||||      
T  12956518 gtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcacttttatcctaaatcatgtaactctataggtgttttg--------tagtgaag 12956609  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    ||| ||||||||||  ||| ||| |||||  ||||||| ||||||||||||||| ||||||| ||| ||| || |||||||||| ||||    
T  12956610 aatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaaga 12956698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 28901426 - 28901243
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || || ||||||| || ||| | ||||||||||||||| ||||||||||| || || ||||| | ||| |||||||        |||||| |    
T  28901426 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgtttttatcctagataatgcaactccttagatgttttg--------tagtgata 28901335  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| || ||||  ||| ||| | ||| |||||||| |||| |||||||||||||||  | ||||||||||| ||||||| ||||||||||    
T  28901334 aataatgtacatcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaat-tcaatggttcttataaggtttctgaagacaat 28901243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 12357574 - 12357620
Alignment:
Q  162 ataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 208  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||    
T  12357574 ataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaa 12357620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 12358702 - 12358748
Alignment:
Q  162 ataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 208  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||    
T  12358702 ataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaa 12358748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 13081992 - 13081938
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag 175  Q
    |||| ||||||||||| || ||||||| ||||| |||||||||||||||||||||    
T  13081992 gagtagttgtaattcagttgtatcctagatcatgcaacttcataggtgttttgag 13081938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 16054334 - 16054436
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataa 199  Q
    |||||||||| || ||| | |||| |||||||||||||||||||||| |||||  |||| ||||| |||||||| | |||| ||||||| ||| || |||    
T  16054334 attttgtattgttttcactcgagttgttgtaattcatttttatcctagatcataaaactccatagatgttttgattgttttgtagtgaggaatcatgtaa 16054433  T
Q  200 atc 202  Q
    |||    
T  16054434 atc 16054436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 31232124 - 31232182
Alignment:
Q  129 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtga 187  Q
    ||||||||  ||||||||||||||| ||||| ||||||||||||| || ||||||||||    
T  31232124 gtaattcagctttatcctaaatcatgcaactccataggtgttttgcgtttttttagtga 31232182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 28902118 - 28902175
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatccta 147  Q
    |||||||||| || ||||||| || ||||| |||||||||||||||| ||||||||||    
T  28902118 gtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatccta 28902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 11310203 - 11310149
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||||||||||| ||| | |||| ||||||||||||||||||| |||||    
T  11310203 gatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaat 11310149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 513
Target Start/End: Complemental strand, 27085181 - 27085121
Alignment:
Q  452 ctttcattcattcaaaaagctaacggtacaagacaagggtcaaggatcaaaacatcaagaca 513  Q
    |||| ||||||| |||||||| | |||||||| ||||||||||| |||||||| ||||||||    
T  27085181 cttttattcatttaaaaagctta-ggtacaagtcaagggtcaagcatcaaaacttcaagaca 27085121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 20694681 - 20694861
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||| ||||| |||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||| |||||| || |||||    
T  20694681 ttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgttttgagtctttttagtaagaaatcatgtaaat 20694780  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| ||| ||| | ||| |||||| ||| | ||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  20694781 cggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaat 20694861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 78 - 281
Target Start/End: Original strand, 26070491 - 26070695
Alignment:
Q  78 gagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc 177  Q
    |||||||| | | |||||| || |||| ||||| || ||||| ||||   ||||||||| ||||||| |||||||| ||||| |||| ||||||||||||    
T  26070491 gagttgtcaatcatttgaggaaaatttagtattgttttcattcgagttaatgtaattcagttttatcataaatcatgcaactccataagtgttttgagtc 26070590  T
Q  178 tttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaag 276  Q
    ||||||||||||||| || ||||| || ||| ||| | |||  ||||| |||||||||||||||||||||||||  ||||||| || |||||||||||||    
T  26070591 tttttagtgagaaatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaag 26070690  T
Q  277 acaat 281  Q
    |||||    
T  26070691 acaat 26070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 7742944 - 7742763
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || || || ||||| |||||||||| ||||||||||||||||  ||  ||||| ||||||||||| |||||| |||||||| || ||||    
T  7742944 attttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatgtaaaatcatatgtgttttgagtttttttaatgagaaatcatgtaaa 7742845  T
Q  201 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || | ||| ||||| |||   ||||| ||| | |||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  7742844 tcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaat 7742763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 90 - 274
Target Start/End: Complemental strand, 24411015 - 24410830
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || |||||||||| || |||||||||||||||||||||| |||||||||||||| | ||||||   ||||||||||||| ||||||||||||    
T  24411015 gtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttgagtatttttagtgaga 24410916  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttga 274  Q
    ||| || | ||| || |||  || | |||  ||||| |||| ||||| |||||||| ||||| ||||||||||| ||||| |||||    
T  24410915 aatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 90 - 273
Target Start/End: Complemental strand, 25594778 - 25594593
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| | |||| |||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| |||||||    
T  25594778 gtttgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaacttcatatgtgttttgagtgttttatagtgag 25594679  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttg 273  Q
    |||| || ||||||| ||||  || | |||  ||||| |||||||||||||||||||||| || ||||| | ||||||||||||||    
T  25594678 aaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttg 25594593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 25367654 - 25367742
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaag 209  Q
    ||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  25367654 gagtcgttgaaattcagttttatcataaatcatgcaacttcataggtgttttgagtctttttagtgagaaatcatgtaaatcggaaaag 25367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 11274368 - 11274223
Alignment:
Q  138 ttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggat 235  Q
    |||||||||||||||| ||||| |||||||||||||||| |||| |||| |||||| || || ||||  ||| ||| | |||  |||||| |||||||||    
T  11274368 ttttatcctaaatcatgcaactccataggtgttttgagtgttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggat 11274269  T
Q  236 atgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  11274268 atgaagattgaagaccaatggttcttagaaggtctttgaagacaat 11274223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 18178162 - 18178319
Alignment:
Q  123 gtcgttgtaattcatttttatcctaaatcatt-caacttcataggtgttttgagtctttttagtgagaaataatataaatcgg-aaaagcaaaatatctt 220  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||| || |||| ||| | | |      
T  18178162 gtcgttgtaattcagttttatcctaaatcattgcaacttcataggtatttttagtctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgc 18178261  T
Q  221 atgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    ||||| |||| |||||||||||||||||||  ||| |||||| |||||| ||||||||    
T  18178262 atgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaaga 18178319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 277
Target Start/End: Original strand, 16634075 - 16634264
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    |||||||||| || ||||||| || ||| | |||||||||||||||| |||||| ||||||||| |||||  ||||||||||||| | ||||  ||||||    
T  16634075 gtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaactctataggtgttttgaatgttttgcagtgag 16634174  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||| ||||||||||  ||| ||| | |||   |||| || |||  |||||||| |||||||  ||||||||||||||||||||||||||    
T  16634175 aaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaaga 16634264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 98 - 281
Target Start/End: Complemental strand, 26330146 - 26329963
Alignment:
Q  98 aatattttgtatttttctcatttgagtc-gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataat 195  Q
    ||||| ||||||| || ||| ||||| | ||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||| ||||  ||||| ||    
T  26330146 aatatattgtattgttttcacttgagccagttgtaattcccttttatcctagatcatgcaacttcataggtgttttgagtgttttgtagt--gaaatcat 26330049  T
Q  196 ataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||||| | |||| ||| | |||  ||||| ||||||||||||||||||||||| | |||||| |||||||||||||| ||||||||    
T  26330048 gtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaat 26329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 30790832 - 30790919
Alignment:
Q  117 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 204  Q
    |||||||||||| ||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| |||| || ||||||||    
T  30790832 atttgagtcgttataattcagttttatcctaaattatccaacttcattggtgttttgagtctttttagtgaaaaattatgtaaatcgg 30790919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 277
Target Start/End: Complemental strand, 11997932 - 11997790
Alignment:
Q  138 ttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaag-ga 234  Q
    |||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||  || |||||||| | ||||| | ||||||| || ||||||| ||    
T  11997932 ttttatactaaatcatgcaacttcataggtgttttgagttttttttagtgagaaaacatgtaaatcggcagagcaagacatcttattaaggatcaagaga 11997833  T
Q  235 tatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||||| ||||||| |||| || ||||||||||||| ||||    
T  11997832 tatgaagaatgaagatcaatgatttttagaaggtttttaaaga 11997790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 19763964 - 19763817
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||||||| |  |||| |||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||    
T  19763964 ttttgtattgttttcatttgaggcaatgtagttcagttttatcctaaatcatgcaacttcat--gtgttttgagtctttttagtgagaaatcatgtaaat 19763867  T
Q  202 cggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagat 250  Q
    ||| ||| | | | |||   ||||| |||||||| |||||||||||||||    
T  19763866 cggcaaaacgagacatcaagtgaagaatcaaggaaatgaagattgaagat 19763817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 17027556 - 17027748
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||| ||| || ||| |||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| | ||||    ||||    
T  17027556 gtttgaggaacatattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactccataggtgttttgactgttttgccatgag 17027655  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| || ||||||| |||| ||| | |||   || |||||||| |||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  17027656 aaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaag-ttaatgcttcttagaaggttcttgaagacaat 17027748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 90 - 280
Target Start/End: Original strand, 24841782 - 24841973
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| | |||||||||||| ||| |||||||||| |||||  |||| |||||||||||| ||| |||| |||||||    
T  24841782 gtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactccataggtgtttttagtgttttgtagtgag 24841881  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 280  Q
    |||| || ||||| | |||| ||| | | |   |||| |||||||||||||  |||||||| | |||||||||||||||| ||||||||||||    
T  24841882 aaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaagacaa 24841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 19331540 - 19331651
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||  ||||||||| |  ||||| |||||||||||||| | |||||||||||||||| ||| | |||  ||||||||||||||||| ||||||    
T  19331540 gtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcctaaatcatgcaattccat--gtgttttgagtcttttttgtgaga 19331637  T
Q  190 aataatataaatcg 203  Q
    ||| || |||||||    
T  19331638 aatcatgtaaatcg 19331651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 29150977 - 29150890
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    ||||||| || ||| |||| || |||||||||||||||||| |||||||| ||| |||||| ||||||||||| |||||||||||||||    
T  29150977 ttgtattattttcacttgaatcattgtaattcatttttatcttaaatcatgcaatttcataagtgttttgagt-tttttagtgagaaat 29150890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 20083494 - 20083688
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc--tttttagtga 187  Q
    ||||||| || ||||| |||| || | ||| ||||  |||||||||| || ||||||||||||| ||| | |||||||||||||||||  ||||||||||    
T  20083494 gtttgaggaacattttttattgtttttattcgagtatttgtaattcagttctatcctaaatcatgcaattccataggtgttttgagtctttttttagtga 20083593  T
Q  188 gaaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     |||| || |||||||| ||| ||||| |||   || ||||| ||||||||||| | ||||| | ||||||| ||| || || |||||| |||||    
T  20083594 aaaattatgtaaatcggcaaaacaaaacatcacgtgaaagattaaggatatgaaaaatgaagttcaatggtttttataaagtatttgaaaacaat 20083688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 25680625 - 25680708
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  25680625 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgcaacttcataggtgttttg 25680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 30072218 - 30072337
Alignment:
Q  164 aggtgttttgagt-ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttctt 261  Q
    ||||||||||||| |||| ||||| ||||| |||| |||||  ||| ||| | |||  |||||| ||||| |||||||||||||||||| ||||||||||    
T  30072218 aggtgttttgagtgctttgtagtgggaaatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttctt 30072317  T
Q  262 agaaggtttttgaagacaat 281  Q
    | ||||||||| ||||||||    
T  30072318 aaaaggtttttaaagacaat 30072337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 15697410 - 15697245
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||||||| ||||| |||||| |||||||| ||||||| || ||  |||||| ||||||||||||||| | |||||| | ||||||    
T  15697410 ttttgtattgttttcatttgagacgttgcaattcagttttatccgaaatcatgcatctctataggtattttgagtctttttattaagaaatcagataaat 15697311  T
Q  202 cggaaaagcaaaatatcttatgaagatcaaggatatgaagattgaagataaatggttcttagaagg 267  Q
    | | ||| ||| | ||| | ||| ||   |||||||||| ||||||||| |||  || ||||||||    
T  15697310 ccgtaaaacaagacatcatgtgaggacttaggatatgaaaattgaagatcaatatttattagaagg 15697245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 16603668 - 16603596
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaat 192  Q
    |||||||||||||| | ||||| |||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  16603668 gagtcgttgtaattaaattttagcctaaatcatgcaatttcataggtgttttgagtgttttctagtgagaaat 16603596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 15205672 - 15205811
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||| ||||| ||||| ||| | |||||||||||||||| ||||  ||||||    
T  15205672 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaattccataggtgttttgagtgttttgcagtgag 15205771  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaagat 228  Q
     |||||| ||||||   ||| ||||| ||||| |||||||    
T  15205772 gaataatgtaaatcatcaaatcaaaacatcttgtgaagat 15205811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 18222522 - 18222613
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    |||||||||| || ||||||| || | | | ||||| |||||||||| |||||||||||||||| ||| | |||||||||||||||| ||||    
T  18222522 gtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatcctaaatcatgcaaatccataggtgttttgagtgtttt 18222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 23157858 - 23157792
Alignment:
Q  106 gtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 172  Q
    ||||| || |||||||||||||||||||||| ||||||| |||||||| ||| | ||||||||||||    
T  23157858 gtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaaatgcataggtgtttt 23157792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 281
Target Start/End: Complemental strand, 16622717 - 16622570
Alignment:
Q  126 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 225  Q
    |||||||| || |||||||||| ||||| |||||||||||||||||||         |||||||||| || ||||| |  ||| ||| | |||  |||||    
T  16622717 gttgtaatacacttttatcctagatcatgcaacttcataggtgttttgc--------agtgagaaatcatgtaaattgacaaatcaagacatcacatgaa 16622626  T
Q  226 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    | || ||||||||||||||||||||  | |||||||||||||| |||||||||||||    
T  16622625 ggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaagacaat 16622570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 22229847 - 22230021
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 202  Q
    ||||||| || ||| |||||||||||||||||| |||||||||| | ||| ||||| || | |||||||| || |||| ||||||| ||| || ||||||    
T  22229847 ttgtattgttttcacttgagtcgttgtaattcagttttatcctagaccatgcaactccacaagtgttttgggtattttgtagtgaggaatcatgtaaatc 22229946  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
       ||| ||| | |||   |||| |||||| |||||| | ||||||||| || ||||||||||||||| |||||||    
T  22229947 aacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttgaaga 22230021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 17695410 - 17695356
Alignment:
Q  227 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||| |||||| | ||||||| ||||||| ||||||||||||||||||||||    
T  17695410 atcaaggttatgaataatgaagatcaatggttattagaaggtttttgaagacaat 17695356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 22754963 - 22755036
Alignment:
Q  130 taattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 202  Q
    ||||||| |||||||||| || || |||||||||||||||||||||| ||||  |||||||||| || ||||||    
T  22754963 taattcagttttatcctagattatgcaacttcataggtgttttgagtgttttgaagtgagaaatcatgtaaatc 22755036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 24279638 - 24279598
Alignment:
Q  163 taggtgttttgagtctttttagtgagaaataatataaatcg 203  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  24279638 taggtgttttgagtcattttagtgagaaatcatataaatcg 24279598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24382576 - 24382616
Alignment:
Q  163 taggtgttttgagtctttttagtgagaaataatataaatcg 203  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  24382576 taggtgttttgagtcattttagtgagaaatcatataaatcg 24382616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 18452760 - 18452705
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| |||||||| ||||||||| ||||||||||| ||||||||| || |||||    
T  18452760 gatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaat 18452705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 540
Target Start/End: Complemental strand, 19763529 - 19763414
Alignment:
Q  426 actataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatcaaaacatcaagacatagggttttc-t 524  Q
    |||||||| || |||| || | ||| |||| |||||||||||||||||  |||||||| ||||||||||  |||||| | ||||| || ||| | ||| |    
T  19763529 actataaatatggacccttatacactcttttattcattcaaaaagctagtggtacaaggcaagggtcaaacatcaaagcttcaaggcagaggatcttcat 19763430  T
Q  525 cctccccttgttctct 540  Q
    ||||| ||||||||||    
T  19763429 cctcctcttgttctct 19763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 11997491 - 11997407
Alignment:
Q  457 attcattcaaaaagctaacggtacaagacaag-ggtcaaggatcaaaacatcaagacatagggttttctcctccccttgttctct 540  Q
    ||||||||  ||||||| | |||||||||||| ||||||| || | | | ||||| || ||||||||||||||| ||||||||||    
T  11997491 attcattcctaaagctagcagtacaagacaagaggtcaagcattagagcttcaaggcaaagggttttctcctccacttgttctct 11997407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 24517414 - 24517466
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||||||||||||  |||||||| ||||||  |||| |||||||||||||    
T  24517414 gagtcgttgtaattcacatttatccttaatcatgtaactccataggtgttttg 24517466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 3e-40; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 21829218 - 21829026
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || |||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||| ||||| |||||||||    
T  21829218 gtttgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaacttcatatgagttttgggtcttgttagtgaga 21829119  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||  | |||||||   || ||| | |||  |||||| |||||||||||||||||||||||| |||||||| | |||||| ||||||||||||    
T  21829118 aatcttgtaaatcgtcgaaacaagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaat 21829026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 11474887 - 11475068
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc-tttttagtgagaaataatataaa 200  Q
    ||||||||| || ||||| || ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| || ||||    
T  11474887 ttttgtattattttcattcgactcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttttgagtcttttttagtgagaaatcatgtaaa 11474986  T
Q  201 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| ||| ||| | |||  ||||| |||| | ||||||| |||| ||||||||||||||||||||| | ||||||||||||    
T  11474987 tcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaagacaat 11475068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 92 - 281
Target Start/End: Complemental strand, 23908354 - 23908164
Alignment:
Q  92 ttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaa 191  Q
    ||||| || |||||||||| || ||||| || ||||||||||||  |||||||| |||| || ||| |||||||||| ||||||||||| ||| ||||||    
T  23908354 ttgaggaacattttgtattgttttcattcgattcgttgtaattcccttttatccaaaataatgcaatttcataggtgctttgagtctttctagggagaaa 23908255  T
Q  192 taatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    | || |||| ||| ||||||| | |||| ||||| ||||||| ||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  23908254 tcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaat 23908164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 121 - 281
Target Start/End: Complemental strand, 19219266 - 19219104
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||||||||||||||| |||||||| ||||||| ||||  ||||  |||||||||| |||| ||||||| ||| || ||||||   ||| ||| | |||     
T  19219266 gagtcgttgtaattcacttttatccaaaatcatgcaacaccataaatgttttgagtgttttgtagtgaggaatcatgtaaatcttcaaaccaagacatca 19219167  T
Q  220 tatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19219166 catgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaat 19219104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 90 - 261
Target Start/End: Complemental strand, 26387930 - 26387758
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||  ||||||||| || ||||||| ||||| |||||| | |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  26387930 gtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagttttatcctaaatcatgcaactccatagatgttttgagtctttttaatgaga 26387831  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttctt 261  Q
    ||| || |||||| |  || ||| | |||   |||| |||||| |||||||| ||||||||| ||||||||||    
T  26387830 aatcatgtaaatcagctaaacaagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttctt 26387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 8402636 - 8402545
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||||| || | |||||||| || ||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  8402636 gtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactccataggtgttttgagtctttt 8402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 26297778 - 26297934
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||  |||| |||| || ||||| |||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||| |||||||| |    
T  26297778 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaacttcata--tgtgttgagtctatttagtgata 26297875  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaa 247  Q
    ||| || |||||||| ||| ||| | |||   |||| |||| |||||||||||||||||    
T  26297876 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaagattgaa 26297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 30493349 - 30493249
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaa 190  Q
    |||||||||  ||||||||| || ||||| ||||||||||| || | |||||||||||||||| ||| | ||| ||||||||||||||||||||||||||    
T  30493349 tttgagaaactttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttttagtgagaa 30493250  T
Q  191 a 191  Q
    |    
T  30493249 a 30493249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 18474236 - 18474391
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa- 225  Q
    |||||||||| | |||||||||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||||| ||  ||| | ||   |||||     
T  18474236 ttgtaattcactgttatcctaaatcatgcaactccataggtgttttgagtcttttcagtgagaaatcatgtaaatcgggaacacaagacattacatgaag 18474335  T
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| | ||| | |||||||||  | |||||| |||||||||| ||||||||||||    
T  18474336 gatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaat 18474391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 26418829 - 26418937
Alignment:
Q  170 tttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggt 268  Q
    ||||| ||||||||||||||||| || ||||||||||||  || | |||  |||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  26418829 tttgaatctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggt 26418928  T
Q  269 ttttgaaga 277  Q
    |||| ||||    
T  26418929 ttttaaaga 26418937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 33577775 - 33577930
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || | |||||| || ||||||||||||| ||||||||||||| |||| |||| |||| ||||||||||||||  || |||  || |||||    
T  33577775 ttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaacctcattggtggtttgagtctttttaaagaaaaaacatgtaaat 33577874  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaagg-atatgaagattgaagataaatg 255  Q
    ||| |||| || | |||  ||||| |||||||| ||||||||| ||||||||||||    
T  33577875 cggcaaagtaagacatcacatgaaggatcaaggtatatgaagaatgaagataaatg 33577930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 77 - 281
Target Start/End: Original strand, 13911281 - 13911478
Alignment:
Q  77 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    ||||||||| |  ||||||| || || | ||||| || ||| |||| || |||||||||| |||||||||| ||||| |||||||||| ||||||| |||    
T  13911281 agagttgtcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaacttcatatgtgtttttagt 13911380  T
Q  177 ctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttga 274  Q
     |||| ||||||||||| || ||||||        || | ||||||||||| |||||||||||||||||| ||  |||||||||||||||||  |||| |    
T  13911381 gttttgtagtgagaaatcatgtaaatc--------aagacatcttatgaaggatcaaggatatgaagattaaat-taaatggttcttagaagaattttca 13911471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 19285139 - 19285319
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| |||||||||||||||| |||| |||||||||   ||||| | ||||||||| |||||| ||| |||||| ||  | ||||    
T  19285139 attttgtattattttcattcgagtcgttgtaattcaattttgtcctaaatccagcaactccttaggtgtttcgagtctctttcgtgagatatcgtgtaaa 19285238  T
Q  201 tcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || ||||| ||| |||||  ||| | |||| | ||||| ||||||||  || |||||||||| |||||| ||||||||||||    
T  19285239 tcagaaaaacaagatatcaaatgtaggatcga-gatatcaagattgataatcaatggttcttggaaggtatttgaagacaat 19285319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 26797308 - 26797221
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcg 203  Q
    ||||| |||||||| ||||||  |||||||||||||||| |||||||||||||| ||||||||||||||| |||| || || |||||||    
T  26797308 tcattcgagtcgttataattctgttttatcctaaatcatgcaacttcataggtg-tttgagtctttttagagagatatcatgtaaatcg 26797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 281
Target Start/End: Original strand, 25883166 - 25883324
Alignment:
Q  124 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 222  Q
    ||||||||||||| |||||||||| || || ||||| |||||||||||||||| |||| ||||||| ||| || || |||   ||| ||| | ||||| |    
T  25883166 tcgttgtaattcagttttatcctagattatgcaactacataggtgttttgagtgttttatagtgaggaatcatgtacatcatcaaatcaagacatcttgt 25883265  T
Q  223 gaa-gatcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     || ||||||||  |||||| ||||||||| || ||||||||||||||| |||||||||||    
T  25883266 taaggatcaagg--atgaagaattgaagatcaagggttcttagaaggttgttgaagacaat 25883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 2729673 - 2729613
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  2729673 gagtccttgtaattcatttttatcctaaaccatgcaacttcatatgtgttttgagtgtttt 2729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 19263855 - 19263809
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggttttt 272  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19263855 gatcaaggatatgaagattgaagatcaatggttcatagaaggttttt 19263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 119 - 277
Target Start/End: Complemental strand, 25919519 - 25919369
Alignment:
Q  119 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 218  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||| |||||||        ||||||| ||| || |||||||  ||| ||| |||||    
T  25919519 ttgagtcatcgtaattcacttttatcctaaatcatgcaactccatagatgttttg--------tagtgaggaatcatgtaaatcgacaaaccaagatatc 25919428  T
Q  219 ttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
      ||||| ||||||||||||||||||||||||| || | || |||||| |||||||||||    
T  25919427 acatgaaggatcaaggatatgaagattgaagatcaacgatttttagaa-gtttttgaaga 25919369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 27415236 - 27415309
Alignment:
Q  129 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaat 201  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||| |||| |||| |||||| || |||||    
T  27415236 gtaattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgttttgtagtaagaaatcatgtaaat 27415309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 5632607 - 5632536
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    |||||| || || |||||||| ||||||||||||| ||||||| | |||||| ||||| |||||||||||||    
T  5632607 ttttgtgttgttttcatttgattcgttgtaattcacttttatcttgaatcatgcaactccataggtgttttg 5632536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 10341957 - 10342008
Alignment:
Q  230 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||||||    
T  10341957 aaggatagaaagattgaagatcagtggttcttagaaggtttttgaagacaat 10342008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 16970293 - 16970360
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 182  Q
    |||||| |||||||||||||||  |||||||||||||||  |||||||| ||||||| |||| |||||    
T  16970293 tcatttaagtcgttgtaattcacgtttatcctaaatcataaaacttcatgggtgtttagagtgttttt 16970360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 16970628 - 16970679
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||||||||||||| |||||||  || |||||||||||||||||||||||    
T  16970628 gatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaaga 16970679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 4780759 - 4780687
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    ||||||| || ||| |||| || |||||||||| | |||||||| ||||||||||||||||| | ||||||||    
T  4780759 ttgtattgttttcacttgaatcattgtaattcactcttatcctacatcattcaacttcatagatattttgagt 4780687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 10341856 - 10341907
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||||||||||| |||||| | ||||||| ||||| |||||||||||||    
T  10341856 agtcgttgtaattcacttttattcaaaatcatgcaactccataggtgttttg 10341907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 27374525 - 27374446
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||||||| || ||||| ||||| || |||| || |||||||||||||||| ||||||| |||||  ||||| ||||||    
T  27374525 ttttgtattgttttcattcgagtcattataatccagttttatcctaaatcatgcaacttcgtaggttatttgaatctttt 27374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 1475366 - 1475297
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaact 159  Q
    ||||||| ||||| ||||||| || ||| | |||||||||||||||| || ||||||| ||||| |||||    
T  1475366 gtttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaact 1475297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 12409501 - 12409558
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttc 161  Q
    ||||||| || ||| |||||||||||||||||||||||||| |  ||||| |||||||    
T  12409501 ttgtattattttcacttgagtcgttgtaattcatttttatcttggatcatgcaacttc 12409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 12573319 - 12573432
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| |||  |||||||| || ||| | ||| ||||||||||||||||||||||| ||||| || || | ||||| |||| ||| |||| |||||||    
T  12573319 gtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgtagtgag 12573418  T
Q  189 aaataatataaatc 202  Q
     ||| || ||||||    
T  12573419 gaatcatgtaaatc 12573432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 13549783 - 13549896
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| |||  |||||||| || ||| | ||| ||||||||||||||||||||||| ||||| || || | ||||| |||| ||| |||| |||||||    
T  13549783 gtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgtagtgag 13549882  T
Q  189 aaataatataaatc 202  Q
     ||| || ||||||    
T  13549883 gaatcatgtaaatc 13549896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 500
Target Start/End: Complemental strand, 19218830 - 19218757
Alignment:
Q  427 ctataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatca 500  Q
    ||||||| | ||||| |||| |||| | | ||||||| | |||||||||||| |||||||||||||||| ||||    
T  19218830 ctataaatagagacccttgtacacattcttattcattaataaagctaacggttcaagacaagggtcaagcatca 19218757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 23007150 - 23007065
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    |||||| ||||| ||||||| || ||  | ||||| || ||| ||| |||||||||||||||| ||||| ||||| ||||||||||    
T  23007150 tttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactccatagatgttttgagt 23007065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 4775763 - 4775719
Alignment:
Q  120 tgagtcgttgtaattcatttttatcctaaatcattcaacttcata 164  Q
    ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  4775763 tgagtcgttgtaattcactcttatcctagatcatgcaacttcata 4775719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 21017937 - 21017997
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    |||||||||||||||| |||||||||| ||||| |||||  | | ||||||||||| ||||    
T  21017937 gagtcgttgtaattcagttttatcctagatcatgcaactctaaatgtgttttgagtgtttt 21017997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 124 - 281
Target Start/End: Complemental strand, 25727961 - 25727802
Alignment:
Q  124 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 222  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| |||||  ||    
T  25727961 tcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacat 25727862  T
Q  223 gaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25727861 gaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaat 25727802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 124 - 281
Target Start/End: Complemental strand, 25736369 - 25736210
Alignment:
Q  124 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 222  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| |||||  ||    
T  25736369 tcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacat 25736270  T
Q  223 gaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25736269 gaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaat 25736210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 31313613 - 31313773
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 221  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || ||||| |||||| ||| | |||       
T  31313613 agtcgttgtaattcacttttatcctaaatcatgcaacttcataggtgttttgagtttttttagtaagaaatcatgtaaattggaaaaacaatacatcacg 31313712  T
Q  222 tgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| ||| ||| ||||||||| ||||||| |||| |||||| ||||||||||||||||||    
T  31313713 tgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaat 31313773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 26102097 - 26102278
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||  |  |||    
T  26102097 attttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactccatgggtgttttgagtctttttagtgagatatcgtgcaaa 26102196  T
Q  201 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||  ||| ||| | |||   |||| ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  26102197 tcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaat 26102278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 11770047 - 11769887
Alignment:
Q  123 gtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatcggaaaagcaaaatatctta 221  Q
    |||||||||||||| ||||||||||||||||  |||||||| ||||| |||||| ||||  |||||||||| || ||||||| |||| ||| | |||  |    
T  11770047 gtcgttgtaattcacttttatcctaaatcatgaaacttcatgggtgtgttgagtgttttgcagtgagaaatcatgtaaatcgaaaaatcaagacatcaca 11769948  T
Q  222 tgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  11769947 tgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 11769887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 281
Target Start/End: Complemental strand, 27461266 - 27461074
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaa 190  Q
    |||||| || |||||||||| || |||||  ||| ||| ||||||| ||||||||||||| || |||||||||||||||||  |||||||||||| ||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaacttcataggtgtttgtagtctttttagtaagaa 27461167  T
Q  191 ataatataaatcggaaaag-caaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || || ||| ||||||||  ||| | |||  ||||| |||| |||||||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  27461166 atcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaat 27461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 26854391 - 26854213
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || |||||  ||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||  ||||||| || ||||     
T  26854391 ttttgtattcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta--gagaaatcatgtaaac 26854294  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| ||| ||| | ||    |||| |||||| |||||||||||||||| | ||||||||||||||| | ||||||||||||    
T  26854293 cggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaat 26854213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 105 - 281
Target Start/End: Complemental strand, 52271315 - 52271138
Alignment:
Q  105 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 204  Q
    |||| |||| |||||| ||||||||| ||||| |||  |||||||| || ||||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  52271315 tgtacttttttcatttaagtcgttgtcattcactttattcctaaattatgcaactccatagatgttttgagtctttttagtgagaaattatgtaaatcgg 52271216  T
Q  205 aaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||| |||||   |   |||| |||| |||||||||||||||||| | |||||| |||||||||| ||||||||||||    
T  52271215 caaaacaaaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaat 52271138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 131 - 281
Target Start/End: Complemental strand, 25730616 - 25730464
Alignment:
Q  131 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-at 228  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||| |||| ||| ||||||| || |||||||  ||| ||| |||||  |||||| ||    
T  25730616 aattcaattttatcctaaatcatgcaacttcacaggtgttttgagtgttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggat 25730517  T
Q  229 caaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| ||||||||| ||||| |||||||||| |||||||||||| ||||||    
T  25730516 caaggagatgaagatttaagatcaatggttcttggaaggtttttgacgacaat 25730464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 77 - 276
Target Start/End: Complemental strand, 15298968 - 15298768
Alignment:
Q  77 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    ||||||||| |  ||||||| ||  ||||||||| |  |||||||| || |||||||| | |||||||| ||||||| ||||||||||||||||||| ||    
T  15298968 agagttgtcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaagttttatccaaaatcatgcaacttcataggtgttttgtgt 15298869  T
Q  177 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    || |||||||| |||| || |||||||| ||| ||| | ||| | | || |||| |||||||||||||| ||||| ||||||||||| ||| | ||||||    
T  15298868 ctatttagtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaa 15298769  T
Q  276 g 276  Q
    |    
T  15298768 g 15298768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 277
Target Start/End: Original strand, 30675513 - 30675701
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| | ||||||||||||| || |||| ||||| ||||| ||||| |||||||||||||||| |||| |||||||    
T  30675513 gtttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactccataggtgttttgagtgttttatagtgag 30675612  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||| || |||||||| ||   || | ||| | |||| ||||||| || ||||||||||| || ||||||||||||||||||||||||||    
T  30675613 aaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaaga 30675701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 115 - 269
Target Start/End: Original strand, 34381762 - 34381920
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt---tagtgagaaataatataaatcggaaaagca 211  Q
    ||||| |||||||||||||||| || ||| ||||||||  |||||||||||||||||||||| ||||   |||||| ||||||| |||||||  ||| ||    
T  34381762 tcattcgagtcgttgtaattcacttctattctaaatcacgcaacttcataggtgttttgagtattttgtatagtgaaaaataatgtaaatcgacaaatca 34381861  T
Q  212 aaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtt 269  Q
    ||| |||   || |||||||||||||||||| |||||||| ||||||| ||| ||||||    
T  34381862 aaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 15417059 - 15416866
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    |||||||||| ||||| |||| || |||||  | || || ||||||| ||||||| |||||||| |||||  ||||||||||||||||||||||  |  |    
T  15417059 gtttgagaaacattttttattgttttcattcaattcattttaattcacttttatcttaaatcatgcaactgtataggtgttttgagtctttttatagtca 15416960  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaa-ggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| || ||| |||| ||||||| | | |  ||||| |||||| ||||||||||| ||||||| ||||||||||| ||||||||| ||||||||    
T  15416959 aatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 90 - 266
Target Start/End: Original strand, 21548677 - 21548854
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||  |||| |||| || ||||| |||||||||||||||| ||||||||||||  || ||||| |||| |||||| |||||||| ||||| ||    
T  21548677 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcagttttatcctaaaaaatgcaactccataagtgtttggagtctttctagtgtga 21548776  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaag 266  Q
    ||| |  |||||||||||| ||| | |||   | ||| ||   ||||||||||||||||| |||||||||||||||||    
T  21548777 aatcaagtaaatcggaaaaacaagacatcacgtaaagaattgtggatatgaagattgaagctaaatggttcttagaag 21548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 272
Target Start/End: Original strand, 18795210 - 18795393
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || |||||||||  || ||||||||||  |||||||| | ||||||||||| |||| || |||||||||||||||||||| |||||||||||    
T  18795210 gtttgaggaacattttgtatcgttttcatttgagtaattgtaatttacttttatcctaagtcatacagcttcataggtgttttgagtcattttagtgaga 18795309  T
Q  190 aataatataaatcggaaaagcaaaatatcttatga-agatcaaggatatgaagattgaagataaatggttcttagaaggttttt 272  Q
    |||  | |||||| | ||| ||| | |||  ||||  |||||| |||||||| | ||||||| |||| ||||  ||||||||||    
T  18795310 aatcgtgtaaatcagcaaaacaagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggttttt 18795393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 105 - 281
Target Start/End: Complemental strand, 19257874 - 19257699
Alignment:
Q  105 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 204  Q
    |||||| || |||||  |||| |||||||||  |||||||||||||||| ||| | | |||||||||||||| |||||||||||||||  | ||||| ||    
T  19257874 tgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtatttttagtgagaaatcgtgtaaattgg 19257775  T
Q  205 aaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     | | ||| | |||  ||| |||||| ||||||||||||||||| || ||  ||||||||||||| ||||||||||||    
T  19257774 cataacaagacatcacatgaaagatcgaggatatgaagattgaacatcaa--gttcttagaaggtctttgaagacaat 19257699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 18301057 - 18300896
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta-gtgagaaataatataaatcggaaaagcaaaatatctt 220  Q
    ||||||||||||| | |||||||  ||||||| |||||||||||||||||||||| |||| | ||||  ||| || ||||| |  ||| ||| | |||      
T  18301057 agtcgttgtaattgacttttatcgaaaatcatgcaacttcataggtgttttgagtgttttaaagtgatgaatcatgtaaatagacaaatcaagacatcac 18300958  T
Q  221 atgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||||| |||||||||||||||||| || |  ||||||||||||||||||||||||||||||    
T  18300957 gtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaat 18300896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 25126509 - 25126620
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||| ||||||||| || | ||||||||||| |||||||| ||||||||||||||||   | |  ||| |||||||||||||||||| |||||    
T  25126509 gtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagttttatcctaaatcatgtgattatatatgtgttttgagtctttttaatgaga 25126608  T
Q  190 aataatataaat 201  Q
    ||| || |||||    
T  25126609 aatcatgtaaat 25126620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 25494536 - 25494382
Alignment:
Q  119 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 218  Q
    ||||||| |||||||| | |||||||||||||||| ||||| |||||||||||||        ||||||||||| || |||||||  ||| ||| | |||    
T  25494536 ttgagtccttgtaatttacttttatcctaaatcatgcaactacataggtgttttg--------tagtgagaaatcatgtaaatcgacaaatcaagacatc 25494445  T
Q  219 ttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
      || ||| | |||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  25494444 acattaaggagcaag-atatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 25494382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 281
Target Start/End: Original strand, 30781794 - 30781981
Alignment:
Q  95 agaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaata 193  Q
    |||||||| ||||||| || ||| | ||| | |||||||||| |||||||| | ||||| ||||| |||||||||||||||| |||| ||||||| |||     
T  30781794 agaaatatattgtattgttttcaatcgagacattgtaattcagttttatccaagatcatacaactccataggtgttttgagtgttttgtagtgaggaatc 30781893  T
Q  194 atataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || ||||||   ||| ||| | ||| | |||| ||||||||  |||||| ||||||||| || |||||||| |||||| |||||||||||    
T  30781894 atgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaaggttgttgaagacaat 30781981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 280
Target Start/End: Original strand, 26657505 - 26657696
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| |||||  |||||| || ||| | || ||||||||||||| |||||||||| ||||  ||||| |||||||||||||||| |||| ||||||     
T  26657505 gtttgaggaatataatgtattgttttcactcgattcgttgtaattcacttttatcctagatcacgcaactccataggtgttttgagtgttttgtagtgaa 26657604  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 280  Q
    |||| || |||||||  ||| ||| | ||    |||| |||||||| |||||| || |||| | ||| ||||||| |||||||||||||||||    
T  26657605 aaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaagacaa 26657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 12810351 - 12810434
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||| || || ||||||| || |||||  |||||||||||||||||||||||||| ||||| ||| ||| |||||||||||    
T  12810351 gtttgaggaacatattgtattgttttcattcaagtcgttgtaattcatttttatcctagatcatgcaatttcgtaggtgttttg 12810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 18391111 - 18391222
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || ||||| |||| || |||||||||||||||||||| | |||||||||| ||||| ||| | |||||| |||| |||| |||||||  |||    
T  18391111 gtttgagtaacattttatattattttcatttgagtcgttgtaattaacttttatcctagatcatgcaattccataggcgtttagagtatttttaggaaga 18391210  T
Q  190 aataatataaat 201  Q
    ||| || |||||    
T  18391211 aatcatgtaaat 18391222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 25373862 - 25373967
Alignment:
Q  177 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    |||||||| |||||||||| |||||||| |||  |||| |||   ||||| ||| |||||||||||||| ||||  |||||||||||||||||| || ||    
T  25373862 ctttttagagagaaataatgtaaatcggcaaaagaaaacatcaattgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaa 25373961  T
Q  276 gacaat 281  Q
    ||||||    
T  25373962 gacaat 25373967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 13807827 - 13807747
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    |||||||||| || |||||  |||||||||||||||  || ||||  |||||| ||||||||||| |||||||||||||||    
T  13807827 attttgtattgttttcattcaagtcgttgtaattcacgttcatccctaatcatgcaacttcatagttgttttgagtctttt 13807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 281
Target Start/End: Original strand, 23223475 - 23223635
Alignment:
Q  124 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 222  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| | | |||| ||||||||||| || ||||||   ||  ||| | |||  ||    
T  23223475 tcgttgtaatttacttttatcctaaatcatgcaactccaaaggtgtttttaatgttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcat 23223574  T
Q  223 gaaga-tcaaggatatgaagattgaagataaatggttcttagaagg-tttttgaagacaat 281  Q
    ||||| |||||||||||||||||||| |  |||  ||| ||||||| ||||||||||||||    
T  23223575 gaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttgaagacaat 23223635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 25965460 - 25965414
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattca 136  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  25965460 gtttgagcaatattttgtattcttctcattcgagtcgttgtaattca 25965414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 50047211 - 50047301
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||||||| || ||||||| || ||| | ||||| | |||||||| |||||||||||||||| ||||| ||||  |||||||||| ||||    
T  50047211 tttgagaaacatattgtattgttttcactcgagtcatggtaattcacttttatcctaaatcatacaactccatatatgttttgagtgtttt 50047301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 25266417 - 25266329
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaa 191  Q
    ||||||| || ||| | ||||| |||||||||||||||||| |  |||||  ||||||||| ||||||||||| |||| ||||||||||    
T  25266417 ttgtattgttttcactcgagtcattgtaattcatttttatcttggatcatggaacttcatatgtgttttgagtgttttgtagtgagaaa 25266329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 31319552 - 31319504
Alignment:
Q  233 gatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||| | ||||||| ||||||||||||||| ||||||||||||||    
T  31319552 gatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 9328334 - 9328388
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||| ||||||||||||||||  | ||| ||||||||||||||||||||||||||    
T  9328334 gatcagggatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaat 9328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 23519716 - 23519662
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||| ||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  23519716 gatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaat 23519662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 50047341 - 50047396
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||| |||||| ||||||||| |||||| |||| |||||| |||||||||||    
T  50047341 gatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaat 50047396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 8247743 - 8247630
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || || |||| || ||| ||||||| ||||||||   ||||| |||| ||||| ||||| |||||||||||||||| |||| |||||||    
T  8247743 gtttgaggaacatattttattattttcacttgagtcattgtaattttgttttaccctagatcatgcaactccataggtgttttgagtgttttgtagtgag 8247644  T
Q  189 aaataatataaatc 202  Q
     ||| || ||||||    
T  8247643 gaatcatgtaaatc 8247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 1174000 - 1174064
Alignment:
Q  155 caacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||||||||||||| |||||||||||||| | | |||| || ||  |||| ||||||||||||||    
T  1174000 caacttcataggtgctttgagtctttttattaataaatcatgtacttcggcaaagcaaaatatct 1174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 26499900 - 26499740
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 221  Q
    ||||||||||||||  ||||||||||||||||  || |||||||||||| ||||| ||||||||||||||| ||  ||||||| ||| ||| ||| |       
T  26499900 agtcgttgtaattcgattttatcctaaatcatgtaatttcataggtgttatgagtgtttttagtgagaaatcatgcaaatcggcaaaacaagataccacg 26499801  T
Q  222 tg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    || |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26499800 tgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaat 26499740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 78 - 281
Target Start/End: Complemental strand, 9943247 - 9943043
Alignment:
Q  78 gagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc 177  Q
    |||||||||| |||||||| ||||||||||||  || |||||  ||  ||||||||||| |||||||||||||||| ||||| |||||||||||| |||     
T  9943247 gagttgtccatcgtttgaggaatattttgtatagttatcattcaagctgttgtaattcacttttatcctaaatcatgcaactccataggtgtttttagta 9943148  T
Q  178 tttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaag 276  Q
    |||||| |||||||| || |||||||||||| ||| | ||   || || || |||||||||||||| |||| || ||||| ||||| ||||||||| |||    
T  9943147 tttttattgagaaatcatgtaaatcggaaaaacaagacattaaatcaaggaccaaggatatgaagaatgaaaatcaatggctcttataaggtttttaaag 9943048  T
Q  277 acaat 281  Q
    |||||    
T  9943047 acaat 9943043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 119 - 277
Target Start/End: Original strand, 16439516 - 16439675
Alignment:
Q  119 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 218  Q
    |||||||||| ||||| | ||||||||||||| || |||||||| | ||||||||||||||||||||||||||| || |||||| ||||| ||| | |||    
T  16439516 ttgagtcgttataattaacttttatcctaaataatgcaacttcacatgtgttttgagtctttttagtgagaaatcatgtaaatcagaaaaacaagacatc 16439615  T
Q  219 ttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
      ||| ||||||| ||||||||||| ||||||| |||||||||||||| | |||||||||    
T  16439616 agatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaaga 16439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 12972435 - 12972291
Alignment:
Q  125 cgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatg- 223  Q
    |||||||||||| || ||||||||||||| |||||||||| ||||||||||||||||||| ||||||| || |||||| ||||| ||| | ||    ||     
T  12972435 cgttgtaattcagttgtatcctaaatcatgcaacttcatacgtgttttgagtctttttagggagaaatcatgtaaatcagaaaaccaagacataacgtga 12972336  T
Q  224 aagatcaaggatatgaagattgaagataaatggttcttagaaggt 268  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||    
T  12972335 aagatcgatgatatgaagattgaagatcaatggttctttgaaggt 12972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 129 - 281
Target Start/End: Complemental strand, 9396652 - 9396500
Alignment:
Q  129 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-ga 227  Q
    ||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| || |||||||| ||| ||| | |||   |||| ||    
T  9396652 gtaattcatctttattctaaatcatgcaacttcatatgtgttttgagtctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaagga 9396554  T
Q  228 tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||| | ||||| ||||||| || | |||||||||  ||||||||||||||    
T  9396553 tcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaat 9396500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 24617541 - 24617695
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    |||||| |||||||| ||||| || | ||| ||||||| |||||||| ||||||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  24617541 gtttgacaaatatttagtattgtt-taattcgagtcgtcgtaattcagttttatcctaaatcatgtaacttcatgagtgttttgagtctttttagtgaga 24617639  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagatt 244  Q
    ||| || |||||| | ||| ||| | ||| | |||| | |||||||||||||||||    
T  24617640 aattatgtaaatcagcaaaacaagacatcatgtgaagggtcaaggatatgaagatt 24617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 33638501 - 33638402
Alignment:
Q  179 ttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||||||||||| || |||||||| ||| ||| |||||   ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  33638501 ttttagtgagaaatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaaga 33638402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 16527950 - 16528002
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  16527950 gagtcgttgtaattcatttttatcctagatcatgcaacttcataggtgttttg 16528002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 115 - 281
Target Start/End: Complemental strand, 14924478 - 14924311
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 214  Q
    ||||| |||||||||||  ||| |||||| ||||||||| ||| |  ||||| |||||||||||||| |||||||||| || |||| | |  || ||| |    
T  14924478 tcattcgagtcgttgtacctcacttttattctaaatcatgcaattatataggggttttgagtcttttaagtgagaaatcatgtaaaccagctaaacaaga 14924379  T
Q  215 tatcttatgaagatcaag-gatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     |||  ||||||| | || |||||||| ||||||||| |||||||| | ||| |||||||||||||||    
T  14924378 catcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaat 14924311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 20495853 - 20495790
Alignment:
Q  117 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt 180  Q
    |||||||||||||||||||| ||||||| ||||| || |||||||||| |||||||||||||||    
T  20495853 atttgagtcgttgtaattcaattttatcttaaattatgcaacttcataagtgttttgagtcttt 20495790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 30355483 - 30355538
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30355483 gatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaat 30355538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 32930527 - 32930447
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||||||| ||||||| ||||||||| || ||| ||| || |||| |||||||||||||||||||||||||| || |||||    
T  32930527 gagtcgttttaattcacttttatccttaaacatgcaatttgatagatgttttgagtctttttagtgagaaatcatgtaaat 32930447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 1755636 - 1755555
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 182  Q
    |||||||||| || |||||||| ||||||||||||| || |||||  ||||||  |||| |||| |||||||||||||||||    
T  1755636 attttgtattgttttcatttgattcgttgtaattcacttgtatccctaatcatgtaactacatacgtgttttgagtcttttt 1755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 22559253 - 22559181
Alignment:
Q  135 catttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 208  Q
    ||||||| ||| ||||||| ||||||||||||||||||| ||| |||||||||||||| || ||||||| ||||    
T  22559253 catttttttcccaaatcatgcaacttcataggtgttttgggtc-ttttagtgagaaatcatgtaaatcgaaaaa 22559181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 26512852 - 26512672
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| || ||||||||||||| ||||| |||| ||||| ||||   |||| |||||||||||||  ||||||||||| || ||||    
T  26512852 attttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttcctagtgagaaatcatgtaaa 26512753  T
Q  201 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||   || ||| | | | | ||||| |||||||||||||||  ||||||| ||||||||||| ||||| | |||| |||||    
T  26512752 -cgatgaaacaagaaaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaat 26512672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 26517968 - 26517788
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| || ||||||||||||| ||||| |||| ||||| ||||   |||| |||||||||||||  ||||||||||| || ||||    
T  26517968 attttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttcctagtgagaaatcatgtaaa 26517869  T
Q  201 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||   || ||| | | | | ||||| |||||||||||||||  ||||||| ||||||||||| ||||| | |||| |||||    
T  26517868 -cgatgaaacaagaaaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaat 26517788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 33638259 - 33638303
Alignment:
Q  233 gatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaaga 33638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 24618053 - 24618104
Alignment:
Q  230 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| ||||||||    
T  24618053 aaggatatgaagattgaagatcaatgattcttagaagatctttaaagacaat 24618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 30355386 - 30355437
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||| ||||||| ||||||| |||||||| |||||| ||||||||||||    
T  30355386 agtcgttttaattcacttttatcataaatcatgcaactttataggtgttttg 30355437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 14768354 - 14768240
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| ||| |||||||||  | ||||| ||||  ||||||||||  ||||| ||||| ||| ||| ||||||  ||||||||||||||| ||  |||    
T  14768354 gtttgaggaattttttgtattggtttcattcgagttattgtaattcacatttattctaaaacatgcaatttcataaatgttttgagtcttttcagataga 14768255  T
Q  190 aataatataaatcgg 204  Q
    ||| || ||||||||    
T  14768254 aatcatgtaaatcgg 14768240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 15998540 - 15998652
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||  |||| |||||| |||| | |||| || || ||||| |||||||||||||||||||||| |||| |||||||    
T  15998540 gtttgaggaaaatattgtattcttttcccttgattcgttgaaattaagttttctcatatatcatgcaacttcataggtgttttgagtgttttgtagtgag 15998639  T
Q  189 aaataatataaat 201  Q
     ||| || |||||    
T  15998640 gaatcatgtaaat 15998652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 26159772 - 26159971
Alignment:
Q  77 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 176  Q
    ||||||||| |  |||| ||||| |||||||||| || ||||| |||||||||||||| | |||| |||||||| || |||||||||| |||||||||||    
T  26159772 agagttgtcaatagtttaagaaacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgttttgagt 26159871  T
Q  177 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    ||||||||||| |||| || || ||| | ||| ||| | ||| | |||| |||  |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  26159872 ctttttagtgaaaaatcatgtagatcagcaaaacaagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaa 26159971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 281
Target Start/End: Original strand, 33519100 - 33519251
Alignment:
Q  131 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atc 229  Q
    |||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||| || | |||||| ||| ||||| ||||  ||||| ||     
T  33519100 aattcagttttatcttaaatcatgcaacttcgtaggtgttttgagtctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaatt 33519199  T
Q  230 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||||||||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  33519200 gaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaat 33519251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 79 - 276
Target Start/End: Original strand, 10576471 - 10576669
Alignment:
Q  79 agttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtct 178  Q
    |||||||||  ||||||  || |||||||||| || ||||| ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| |||    
T  10576471 agttgtccatggtttgaagaacattttgtattgttttcattcgagtcattgtaattcacttttattctaaattatacaacttcataggtgttttgattct 10576570  T
Q  179 ttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaag 276  Q
    || ||||||||||| || |||||||||||| ||| | ||| | |||| |||| |||||||||||| | ||||   ||| || |||||||||||||||||    
T  10576571 ttctagtgagaaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaag 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 31859938 - 31859794
Alignment:
Q  138 ttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggata 236  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| | ||| ||| | | |   |||| |||| ||||||    
T  31859938 ttttatcctaaatcatgcaactgcataggtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggata 31859839  T
Q  237 tgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  31859838 tgaatattgaagatcaatggttcttagaaggtatttgaagacaat 31859794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 104 - 278
Target Start/End: Original strand, 9288253 - 9288428
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcg 203  Q
    ||||||| || ||||||||||| || ||||||||||||||| ||||||||  | || |||| || |||| ||||||||||||||||||| || |||||||    
T  9288253 ttgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgtttttttagtctttttagtgagaaatcatgtaaatcg 9288352  T
Q  204 gaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagac 278  Q
    | ||| ||| | |||   |||| ||||||||||||||||||||||||  |||||||||||| ||||| || |||||    
T  9288353 gcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttcttagcaggttgttaaagac 9288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 29437539 - 29437677
Alignment:
Q  129 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-ga 227  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || |||||||| ||  ||| | |||   |||| ||    
T  29437539 gtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttttaatgagaaatcatgtaaatcggcaagacaagacatcacgtgaagga 29437638  T
Q  228 tcaaggatatgaagattgaagataaatggttcttagaag 266  Q
    || |||||||||||||||||| | |||||||||||||||    
T  29437639 tcgaggatatgaagattgaagttcaatggttcttagaag 29437677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 282
Target Start/End: Complemental strand, 17339897 - 17339706
Alignment:
Q  92 ttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaa 191  Q
    ||||| || ||||||||| ||| |||||  |||| |||||||||| |||||||||||||||| ||| ||||||||||||||||  ||||||||||||| |    
T  17339897 ttgaggaacattttgtatctttttcattctagtctttgtaattcaattttatcctaaatcatgcaatttcataggtgttttgaagctttttagtgagaga 17339798  T
Q  192 taatataaatcggaaaagcaaaatatcttatgaa-gatcaag-gatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 282  Q
    |  | | |||||  ||||||| |||||  ||||| ||||||| |||||| ||| ||||||| | || |||||| ||| |||||||||||||||    
T  17339797 tcgtgt-aatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaatt 17339706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 21167769 - 21167876
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| |||| ||||||||| | ||||||||||||  ||  |||||||||||||||||||| |||||||||||||||| || ||||    
T  21167769 attttgtattgttttcattcgagttgttgtaatttacttttatcctaaaatatgtaacttcataggtgttttgagactttttagtgagaaatcatgtaaa 21167868  T
Q  201 tcggaaaa 208  Q
    ||||||||    
T  21167869 tcggaaaa 21167876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 15192268 - 15192425
Alignment:
Q  126 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatga 224  Q
    ||||||||||| |||||||||| ||| | || || |||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| | |||   |||    
T  15192268 gttgtaattcacttttatcctagatcgtgcagctccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtga 15192367  T
Q  225 ag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 282  Q
    || |||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||    
T  15192368 aggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaatt 15192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 23353664 - 23353839
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    ||||||||| || ||||| |||||||||||||||| ||||||  |||||| | ||  |||||  ||||||||||||||||||||||||||| || |||||    
T  23353664 ttttgtattgttttcattcgagtcgttgtaattcaattttata-taaatcgtgcacattcatgagtgttttgagtctttttagtgagaaatcatgtaaat 23353762  T
Q  202 cggaaaagcaaaatatcttatgaagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| ||| ||| | |||  ||||||  |||||||||||||||| ||||| ||| |   ||||||||| ||| ||||||||    
T  23353763 cggcaaaacaagacatcacatgaaggacaaggatatgaagattaaagatcaatag---ttagaaggtcttttaagacaat 23353839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 91 - 281
Target Start/End: Complemental strand, 25315316 - 25315125
Alignment:
Q  91 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt-ctttttagtgaga 189  Q
    |||||| || || ||||||| || ||| |||||||||||||||| | |||||||||| ||||| ||||| |||| | |||||||||  ||| |||||||     
T  25315316 tttgaggaacatattgtattgttttcacttgagtcgttgtaattaagttttatcctagatcatgcaactccatatgggttttgagtaatttgtagtgagg 25315217  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| || |||||||  ||| ||| | |||  ||||| ||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||    
T  25315216 aatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaagacaat 25315125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 281
Target Start/End: Original strand, 5676268 - 5676421
Alignment:
Q  130 taattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatcggaaaagcaaaatatcttatgaag-a 227  Q
    |||||||||||||||||||||  | ||||| |||||||||||||||| ||||| |||||  ||| || ||||| |  ||| ||| | |||  |||||| |    
T  5676268 taattcatttttatcctaaattgtgcaactccataggtgttttgagtattttttagtgatgaatcatgtaaattgataaatcaagacatcacatgaagga 5676367  T
Q  228 tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||||| ||| ||||| | ||||| |||||||||||||||||||||||||    
T  5676368 tcaaggatattaagtttgaatacaaatgattcttagaaggtttttgaagacaat 5676421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 47024842 - 47024665
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    |||||| |||||| ||||||| || ||| | ||| |||| ||||||| |||||||||| ||||| ||||||||  |||||||||        ||||||||    
T  47024842 gtttgaaaaatatattgtattgttttcactcgagccgttctaattcacttttatcctagatcatgcaacttcaatggtgttttg--------tagtgaga 47024751  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    ||| || ||||||| |||| ||| | |||  |||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  47024750 aatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 146 - 282
Target Start/End: Original strand, 13064511 - 13064648
Alignment:
Q  146 taaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagatt 244  Q
    |||||||| ||| || |||||||||||||||| ||||||| |||||| || ||||| || ||| ||| | |||   ||||| |||||||||| || ||||    
T  13064511 taaatcatgcaattttataggtgttttgagtcattttagtaagaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgatt 13064610  T
Q  245 gaagataaatggttcttagaaggtttttgaagacaatt 282  Q
    |||| | ||||||||||||| ||| |||||||||||||    
T  13064611 gaagttcaatggttcttagagggtatttgaagacaatt 13064648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 17187252 - 17187394
Alignment:
Q  138 ttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggata 236  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||| |||| || |||||||  |||  || | |||   |||| |||  ||||||    
T  17187252 ttttatcctaaatcatgcaacttcataggtg--ttgagtctttttagtgataaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggata 17187349  T
Q  237 tgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||||||| | | ||||||||||||| | ||||||||||||    
T  17187350 tgaagattgaagttcagtggttcttagaagttatttgaagacaat 17187394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 281
Target Start/End: Original strand, 19601863 - 19602019
Alignment:
Q  126 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatg- 223  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| |||| ||  |||| ||||||||||| || ||||||   ||| ||| | |||   ||     
T  19601863 gttgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtga 19601962  T
Q  224 aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  19601963 aagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaagacaat 19602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 13275830 - 13275635
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    |||||||||| || ||||||| || ||||| |||||||| ||||||| ||| |||| ||||||| |||||   ||||||||||||||||||||| ||  |    
T  13275830 gtttgagaaacatgttgtattgttttcattcgagtcgttataattcactttcatcccaaatcatacaactctgtaggtgttttgagtctttttattgcta 13275731  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaa-ggatatgaagat--tgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| || ||| |||| ||||||| | | |  | ||| ||| || ||||||||| ||  ||||||| |||||||||| |||| ||||||||||||||    
T  13275730 aatcatgtaattcggcaaagcaatacaccacacgaaggattaagggatatgaatataatgaagatcaatggttctttgaagttttttgaagacaat 13275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 24925821 - 24925909
Alignment:
Q  77 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 165  Q
    ||||||||| | |||||||| || |||||||||| || |||||||||||| ||||||||| ||||||| ||||||||  ||||||||||    
T  24925821 agagttgtcaatcgtttgagtaacattttgtattgttttcatttgagtcgctgtaattcacttttatcataaatcatgtaacttcatag 24925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 277
Target Start/End: Original strand, 46647233 - 46647412
Alignment:
Q  98 aatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaataata 196  Q
    ||||||||||||| || |||||  ||||| ||||||||| |||||||||||||||| ||||| |||| |||  ||||| | ||||||  ||||||| |||    
T  46647233 aatattttgtattgttttcattctagtcggtgtaattcacttttatcctaaatcatgcaactccataagtg--ttgagttatttttatcgagaaatcata 46647330  T
Q  197 taaatcggaaaagcaaaatatcttatga-agatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||| | ||| ||| | |||   |||  |||||| |||||||| | ||||||| ||||||||||| ||||||||| ||||    
T  46647331 taaatcagcaaaacaagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaaga 46647412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 281
Target Start/End: Complemental strand, 34864342 - 34864189
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 225  Q
    |||||||||| ||||||||||||| ||  |||| |||  ||||||||||| |||| ||||||||||| || |||||||  ||| ||| | |||   ||||    
T  34864342 ttgtaattcacttttatcctaaattatgaaactccat--gtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaa 34864245  T
Q  226 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    | ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||    
T  34864244 ggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgtagacaat 34864189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 22119706 - 22119777
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    ||||| |||||||| | ||||| || ||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22119706 gagtcattgtaatttacttttacccaaaatcatgcaactacataggtattttgagtctttttagtgagaaat 22119777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 279
Target Start/End: Original strand, 27302807 - 27302996
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || |||||||||| || ||| | ||||| |||||||||| || ||| ||| ||||| ||||||||| |||||||| ||| |||| ||||||     
T  27302807 gtttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaacttcat-ggtgtttttagtattttgtagtgat 27302905  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagaca 279  Q
     ||| || |||||||  |||  || | |||   || ||||||||||||||||| |||||| || || |||||||||||||||||||||||||    
T  27302906 gaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttgaagaca 27302996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 281
Target Start/End: Complemental strand, 17026751 - 17026590
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 219  Q
    |||| ||||||||||| |||||||||| ||||| ||||| |||||||||||||||| |||| |||| | |||| || |||||||  |||  || | |||     
T  17026751 gagttgttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatca 17026652  T
Q  220 tatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||||| ||||||| ||||||  ||| ||| | ||||||||||| || |||||||||||||||    
T  17026651 catgaaggatcaagtatatgagaatttaag-ttaatggttcttaaaaagtttttgaagacaat 17026590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 10320301 - 10320202
Alignment:
Q  94 gagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaat 192  Q
    |||||| || ||||||| || ||| | |||||||||||||||| |||||||||| | ||| ||||| |||||||||||| || | ||| |||||||||||    
T  10320301 gagaaacatattgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgttttaagctttttgtagtgagaaat 10320202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 21077262 - 21077373
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||||||  ||||||||| || | ||| ||||||||||| |||| |||||||  |||||||  || | ||||||||||||  ||||||||||||| |    
T  21077262 gtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaattttatcacaaatcatcaaattccataggtgtttttggtctttttagtgaaa 21077361  T
Q  190 aataatataaat 201  Q
    ||| || |||||    
T  21077362 aatcatgtaaat 21077373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 22119791 - 22119842
Alignment:
Q  230 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||    
T  22119791 aaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaat 22119842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 13206697 - 13206647
Alignment:
Q  154 tcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 204  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||||||||    
T  13206697 tcaatttcataggtgttttgagtcattttagtgagaaatcatgtaaatcgg 13206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 4732790 - 4732891
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    ||||| |||| || |||||||||||||||||||| |  ||||||||||| ||| |||||||| | |  |||| ||||||||||  ||||||| || ||||    
T  4732790 attttatattgttttcatttgagtcgttgtaatttaaatttatcctaaaccatacaacttcacaagcttttttagtctttttaacgagaaatcatgtaaa 4732889  T
Q  201 tc 202  Q
    ||    
T  4732890 tc 4732891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 5906703 - 5906660
Alignment:
Q  234 atatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||    
T  5906703 atattaagatttaagattaatggttcttagaaggtttttgaaga 5906660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 7024167 - 7024116
Alignment:
Q  226 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||||| |||||||||||||||||  ||||||||||||||| || |||||||    
T  7024167 gatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaaga 7024116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 20044218 - 20044309
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    ||||| |||| || ||||| ||||| |||||||||| |||  |||| |||||| ||||| |||| || ||||||||||||||| ||| ||||    
T  20044218 attttatattgttttcattcgagtcattgtaattcaatttcttccttaatcatgcaactccatatgtattttgagtctttttattgaaaaat 20044309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 12243740 - 12243698
Alignment:
Q  162 ataggtgttttgagtctttttagtgagaaataatataaatcgg 204  Q
    |||||||||||||||| |||||||||||||| || ||||||||    
T  12243740 ataggtgttttgagtcattttagtgagaaatcatgtaaatcgg 12243698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 18444304 - 18444370
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||| ||| || ||||||||| |||||||||||||||  ||||| ||||||| |||| ||||||||    
T  18444304 tcattcgagccgctgtaattcagttttatcctaaatcacgcaactccataggtattttaagtctttt 18444370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 30624953 - 30624997
Alignment:
Q  148 aatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    |||||| ||| ||||||||||||||||||||||||| ||| ||||    
T  30624953 aatcatgcaatttcataggtgttttgagtctttttattgaaaaat 30624997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 90 - 277
Target Start/End: Original strand, 17152182 - 17152371
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgag 188  Q
    ||||||| ||||||||||||| || ||||| |||||||||||||| | ||||||| ||| |||| |||||   || ||||||||||| ||||| ||| ||    
T  17152182 gtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactctgtaagtgttttgagttttttttagtaag 17152281  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 277  Q
    |||| || |||||||| ||| ||| | ||| | ||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  17152282 aaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaaga 17152371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 21849158 - 21848967
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    ||||||| || |||||||||| || || |||||||| |||||||||| ||||||| |||||||| ||||| ||||||  |||||||||||||||||||||    
T  21849158 gtttgaggaacattttgtattgttttc-tttgagtcattgtaattcagttttatcataaatcatgcaactccataggatttttgagtctttttagtgaga 21849060  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| |||||||||| | ||| | |||  ||||| |||||||||||  || | |||| || ||||||||||| |||||||| ||| |||||    
T  21849059 aataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaat 21848967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 31262063 - 31262218
Alignment:
Q  125 cgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatga 224  Q
    |||||||||||| |||||||| ||| ||| |||||||| ||||||||| ||||||||||||||||| | || ||||| || ||| ||| | | |  ||||    
T  31262063 cgttgtaattcagttttatcc-aaaccatgcaacttcacaggtgttttaagtctttttagtgagaattcatctaaattggcaaaacaagacaccacatga 31262161  T
Q  225 agatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  31262162 agatcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaat 31262218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 19541078 - 19541245
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||||||||| | ||| | ||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| || |||||    
T  19541078 ttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactccataggtgttttgagtctttctagtgagaaatcatgtaaat 19541177  T
Q  202 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggt 268  Q
    ||| |||  || | |||   |||| |||| |||||||||||||||||||  ||||||||||| |||||    
T  19541178 cggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataaggt 19541245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 18236388 - 18236196
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 189  Q
    |||||||||| | ||| |||| || ||||| |||| ||| ||||||| ||||||| |||||||| ||||| |||| || |||||||||||||||||||||    
T  18236388 gtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactccataagtattttgagtctttttagtgaga 18236289  T
Q  190 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||| || ||| |||| ||| ||| | |||  ||||| |||||   |||||||||||||||   |||||||||||||||||| |||||||||||    
T  18236288 aatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaat 18236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 24047422 - 24047604
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||| ||||| |||||||||| ||||||||||||| || ||||| ||||||  ||||| ||| ||||||||||||||  || |||    
T  24047422 attttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactccataggcattttgggtcattttagtgagaaatcctacaaa 24047521  T
Q  201 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttct-tagaaggtttttgaagacaat 281  Q
    |||| ||| ||| | |||  ||||| ||||||||||||||||| ||||||| |||||||||  | ||||||| ||||||||||    
T  24047522 tcggcaaaacaagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaat 24047604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 30998800 - 30998992
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| ||||||||||||| |||| |||||||||| ||||| ||||| |||||||||||||||| |||| ||||||     
T  30998800 gtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatacaactccataggtgttttgagtgttttgtagtgaa 30998899  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     | | || |||||||  ||| ||| |||||   |||| ||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||    
T  30998900 gagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaagacaat 30998992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 39730508 - 39730668
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 221  Q
    ||||||||||||||| |||||||||||||||| |||||    ||||||||||||| ||||||||||||||| ||||||||| | ||| ||| | |||  |    
T  39730508 agtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttttagtgagaaatcatataaatcagcaaaacaagacatcaca 39730607  T
Q  222 tgaa-gatcaa-ggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| |||||| ||||||||||| ||||||  |||  ||||||||||  |||||||||||||    
T  39730608 tgaaggatcaagggatatgaaga-tgaagactaatatttcttagaagaattttgaagacaat 39730668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 21505211 - 21505032
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 202  Q
    ||||||| || ||| | ||||| || ||||| | |||||||||||||||| ||||||| ||| |||||||||| |||| ||||||| ||| || ||||||    
T  21505211 ttgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaacttcttagatgttttgagtgttttgtagtgaggaatcatgtaaatc 21505112  T
Q  203 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |  |||  || | |||  ||||| |||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||    
T  21505111 gataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaagacaat 21505032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 101 - 280
Target Start/End: Complemental strand, 15454605 - 15454433
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || || |||||||||||||| ||||||||||||||||||||| ||       ||||||||||||| |||||||||||||||  | ||||    
T  15454605 attttgtattgttttcttttgagtcgttgta-ttcatttttatcctaaatcatgca-------aggtgttttgagtttttttagtgagaaatcgtgtaaa 15454514  T
Q  201 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 280  Q
    |  | ||| ||| | |||  ||||| ||||||||||||||||| | ||||||||||||||||| ||| ||| | |||||||    
T  15454513 ttagcaaaacaagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 27417301 - 27417156
Alignment:
Q  138 ttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggat 235  Q
    |||||||||||||||| ||||| |||||||||||| ||| |||| ||||||||||| || |||||||  ||| ||| | |||  |||||| ||||| |||    
T  27417301 ttttatcctaaatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgat 27417202  T
Q  236 atgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||  |||||||  ||||||||| |||||||||||||| |||||    
T  27417201 atgaatgttgaagaccaatggttctaagaaggtttttgaaaacaat 27417156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 14922044 - 14921932
Alignment:
Q  170 tttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggt 268  Q
    ||||||||||||| ||||||||| || |||||||||||| ||| | ||| | |||||| || |||||||||||||||||| | |||||||||||||||||    
T  14922044 tttgagtctttttcgtgagaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggt 14921945  T
Q  269 ttttgaagacaat 281  Q
     | || |||||||    
T  14921944 atatgtagacaat 14921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 17415201 - 17415058
Alignment:
Q  138 ttttatcctaaatcattcaact-tcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggat 235  Q
    ||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||  | |||||||| ||| ||| | |||   |||| |||| ||||     
T  17415201 ttttatcgtaaataatgcaactctcataggtgttttgagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggac 17415102  T
Q  236 atgaagattgaagataaatggttcttagaaggtttttgaagacaa 280  Q
    |||||||||||| || |||||||||||| || | |||||||||||    
T  17415101 atgaagattgaa-atcaatggttcttaggagttatttgaagacaa 17415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 27918053 - 27917985
Alignment:
Q  106 gtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttga 174  Q
    ||||| || |||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||    
T  27918053 gtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactccataggtgttttga 27917985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 101 - 279
Target Start/End: Original strand, 18117023 - 18117201
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    |||||||||| || ||||||||||| |||||||||| ||| |||| |||| || |||||   | |||||||||| ||||||||   | |||| || ||||    
T  18117023 attttgtattgttttcatttgagtcattgtaattcactttaatcc-aaataatgcaactaggttggtgttttgaatctttttaacaaaaaatcatgtaaa 18117121  T
Q  201 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagaca 279  Q
    |||| ||| ||| |||||   ||||| ||| |||||||||| | ||||||||||||||||||||||  ||||| ||||||    
T  18117122 tcggcaaaacaagatatcgcgtgaagcatcgaggatatgaaaaatgaagataaatggttcttagaatattttttaagaca 18117201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 18818737 - 18818923
Alignment:
Q  101 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 200  Q
    ||||| |||| || ||||||||||||||| |||| | ||||||| |||||||| ||| | |||||  ||||| |||||||||| |||||||| || ||||    
T  18818737 attttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattgagaaatcatgtaaa 18818836  T
Q  201 tcggaaaagcaaaatatcttatgaa-gatca-----aggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||| ||| |||   |||   |||| ||| |     |||||||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  18818837 tcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaat 18818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 17240928 - 17240831
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||| |||| || ||||| ||||||| |||||| | |||||| ||||||||| ||||||||||||||  |||||| |||||||||| |||| ||||||||    
T  17240928 ttttctattgttttcattcgagtcgtcgtaatttagttttattctaaatcatgcaacttcataggtg--ttgagtgtttttagtgaaaaatcatataaat 17240831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 35707832 - 35708024
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    |||||||||| || ||||||| || ||| |||| | ||||||||||| |||||||||| ||    | |||||||||||||||||||| |||| |||||||    
T  35707832 gtttgagaaacatgttgtattgttttcacttgatttgttgtaattcagttttatcctagattgcacgacttcataggtgttttgagtgttttgtagtgag 35707931  T
Q  189 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     ||| || ||||||  |||| ||| | ||| | ||||| |||||||  |||||| |||||| || || | ||||||||||||| |||||||||||    
T  35707932 gaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaagg--atgaagaattgaatatcaaggtttcttagaaggttgttgaagacaat 35708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 15454146 - 15454025
Alignment:
Q  418 aatgataaactataaacatagaccattgtgcacactttcattcattcaaaaagctaacggtacaagacaagggtcaaggatcaaaacatcaagacatagg 517  Q
    |||||| |||||||||   ||||| |||  |||||||| ||||||| | ||| |||  |||||||||||| ||||||| ||||||   ||||| ||||||    
T  15454146 aatgatgaactataaatcgagacccttgcacacacttt-attcatttagaaacctaggggtacaagacaatggtcaagaatcaaactttcaaggcatagg 15454048  T
Q  518 gttttctcctccccttgttctct 540  Q
    |||||||||||| ||||||||||    
T  15454047 gttttctcctcctcttgttctct 15454025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 24188007 - 24188190
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaa---tcattcaacttcataggtgttttgagtctttt-tagtgagaaataatat 197  Q
    ||||||||| |  ||||| ||||| |||| ||||| ||||||||||||   |||||||||| || | ||||||||||| |||| ||||||||||| || |    
T  24188007 ttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtattttgtagtgagaaatcatgt 24188106  T
Q  198 aaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||   || |||   |||  ||||| ||||||| ||||||||||||||||  ||| | |||||||| |||||||||||||||    
T  24188107 aaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttgaagacaat 24188190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 34063919 - 34063839
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 182  Q
    ||||||||| || ||||| |||| ||||||||||| | |||||||||||||| ||||| || | ||||||||||| |||||    
T  34063919 ttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagttttttt 34063839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 30705260 - 30705311
Alignment:
Q  119 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtt 170  Q
    |||| ||||||||||| | |||||||||||||||| ||||||||||||||||    
T  30705260 ttgactcgttgtaatttacttttatcctaaatcatgcaacttcataggtgtt 30705311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 22388827 - 22388732
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 201  Q
    |||| |||| || ||||||||||| ||||||| || ||||||||| |||||| |||||||||     ||||||||||||| |||||||||| || |||||    
T  22388827 ttttttattgttttcatttgagtcattgtaatccagttttatcctgaatcatgcaacttcatt----ttttgagtcttttcagtgagaaatcatgtaaat 22388732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 31274131 - 31274177
Alignment:
Q  235 tatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaat 31274177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 31449994 - 31450088
Alignment:
Q  98 aatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    |||||||||||||||| ||||| ||||| || ||| ||| |||  |||| ||| || |||||| ||||||||||||||| |||||| ||| ||||    
T  31449994 aatattttgtatttttttcattagagtcattataaatcagtttattccttaattatgcaactttataggtgttttgagtatttttattgataaat 31450088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 1733143 - 1733212
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 173  Q
    ||||||| || |||||||||||||||||||||| |||||||||| | |||  ||||  ||||||||||||    
T  1733143 ttgtattgttttcatttgagtcgttgtaattcagttttatcctagagcatgaaactatataggtgttttg 1733212  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 24188515 - 24188556
Alignment:
Q  457 attcattcaaaaagctaacggtacaagacaagggtcaaggat 498  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  24188515 attcattcaaaaagctagcggtacaaggcaagggtcaaggat 24188556  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 32276568 - 32276503
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtg 186  Q
    ||||| |||||||| |  ||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  32276568 gagtcattgtaattgaagtttattctaaatcattcaactccatgggtgttttgagtccttttagtg 32276503  T

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Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 21843074 - 21843006
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 172  Q
    ||||||| || ||||| ||||| |||||||| | |||||||||||||||| |||||  |||||||||||    
T  21843074 ttgtattgttttcattcgagtcattgtaatttacttttatcctaaatcatgcaactctataggtgtttt 21843006  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 28278494 - 28278434
Alignment:
Q  105 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 165  Q
    |||||| || ||| |||||||||||||||||| |||||||||| ||||| ||||| |||||    
T  28278494 tgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactccatag 28278434  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 35031731 - 35031843
Alignment:
Q  90 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 188  Q
    ||||||| || || ||||||| || ||| | |||||||||||| | | |||||||||| ||||| ||| | |||||||||||||||| |||| |||| ||    
T  35031731 gtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaattccataggtgttttgagtgttttgtagtcag 35031830  T
Q  189 aaataatataaat 201  Q
     ||| ||||||||    
T  35031831 gaatcatataaat 35031843  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 17884588 - 17884542
Alignment:
Q  229 caaggatatgaagattgaagataaatggttcttagaaggtttttgaa 275  Q
    |||||||||||||| ||||||| | || |||||||||||||||||||    
T  17884588 caaggatatgaagaatgaagatcattgattcttagaaggtttttgaa 17884542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 1732656 - 1732756
Alignment:
Q  166 gtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttaga 264  Q
    ||||||||||||||||| || |||||| || ||||| |  ||| ||| | |||  |||||| || ||| ||||||||||||||||| |||| ||||||||    
T  1732656 gtgttttgagtctttttggtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttaga 1732755  T
Q  265 a 265  Q
    |    
T  1732756 a 1732756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 104 - 281
Target Start/End: Original strand, 21440 - 21619
Alignment:
Q  104 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatc 202  Q
    ||||||| || ||| | |||||||||||||||| |||||||||||||||| ||||||||||  ||||||| || ||||  |||||| ||| || ||||||    
T  21440 ttgtattgttttcactcgagtcgttgtaattcacttttatcctaaatcatgcaacttcataattgttttgggtgttttgcagtgaggaatcatgtaaatc 21539  T
Q  203 ggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |  ||| ||| | ||   |||||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  21540 gacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaagacaat 21619  T

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Target: scaffold0188 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 27009 - 26848
Alignment:
Q  122 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt-ttagtgagaaataatataaatcggaaaagcaaaatatctt 220  Q
    |||| |||||||| | |||||||||||||||| ||||| |||||||||||||||| |||  ||||||||||| || |||||||  |||  || | |||      
T  27009 agtcattgtaatttacttttatcctaaatcatacaactacataggtgttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcac 26910  T
Q  221 atg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
     || ||||||||||||||||| ||||||| | |||||||||||||| ||| |||||||||||    
T  26909 gtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaat 26848  T

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Target: scaffold0190 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 11771 - 11692
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 181  Q
    ||||||||  || |||||||| ||||||||||||| |||| ||||||||||| ||||| ||| |||||||||||||||||    
T  11771 ttttgtatagttttcatttgaatcgttgtaattcagttttgtcctaaatcatgcaactacatgggtgttttgagtctttt 11692  T

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Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 11746 - 11692
Alignment:
Q  227 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    ||||||||||| |||| |||| |||||| ||||||||||||||||||||| ||||    
T  11746 atcaaggatattaagaatgaatataaatagttcttagaaggtttttgaagtcaat 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 13126 - 13043
Alignment:
Q  121 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcg 203  Q
    |||| |||| |||||| ||||||||||||| || ||||| || ||||||||||||| |||| ||||||| ||| || |||||||    
T  13126 gagttgttggaattcacttttatcctaaattatgcaactccacaggtgttttgagtgttttgtagtgaggaatcatgtaaatcg 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 502
Target Start/End: Complemental strand, 11367 - 11322
Alignment:
Q  457 attcattcaaaaagctaacggtacaagacaagggtcaaggatcaaa 502  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||    
T  11367 attcattcagaaagctaacgttacaaggcaagggtcaagcatcaaa 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 12328 - 12387
Alignment:
Q  145 ctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcg 203  Q
    ||||||||| ||||| |||||||||||||||| |||| ||||||||||| || |||||||    
T  12328 ctaaatcatgcaactccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcg 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 228245 - 228202
Alignment:
Q  115 tcatttgagtcgttgtaattcatttttatcctaaatcattcaac 158  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||    
T  228245 tcattcgagtcgttgtaattcatttttatcataaatcatgcaac 228202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 1907 - 1817
Alignment:
Q  102 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 192  Q
    ||||||||| || |||||  |||| |||||||  | ||||||||||||| || ||||||  |||||  ||||| |||||||||||||||||    
T  1907 ttttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaactttgtaggttatttgaatctttttagtgagaaat 1817  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 22560 - 22507
Alignment:
Q  227 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 281  Q
    |||||||||||||||| ||||| | |||||||| |||||||||||| ||||||||    
T  22560 atcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaat 22507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 47869 - 47813
Alignment:
Q  127 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta 183  Q
    |||||||||| |||  ||| |||| ||||||||||||| ||||||||| ||||||||    
T  47869 ttgtaattcaatttattcccaaattattcaacttcatacgtgttttgattcttttta 47813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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