View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10729_5 (Length: 498)
Name: NF10729_5
Description: NF10729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10729_5 |
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Alignment Details
Target: chr8 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 21 - 484
Target Start/End: Original strand, 34626117 - 34626589
Alignment:
| Q |
21 |
taatgaagttcaacatcagagaattgaaggccatgcgagccatttctgatgacaattttgtcacttcgaccatccaagaaatctaagggtactaaggtta |
120 |
Q |
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| T |
34626117 |
taatgaagttcaacgtcagagaattgaaggccatgcgagccatttctgatgacaattttgtcaattccaccatccaagaaatctaagggtactaaggtta |
34626216 |
T |
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| Q |
121 |
gacttagacaaacattgcaacgcaaaggcaa-------------caactttgctttcacagggtcagtcgaatcctataaagcaggtaccttttattggt |
207 |
Q |
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| T |
34626217 |
gacttagacaaacattgcaacgcaaaggcaacaaatcattgcaacaactttgctttcacagggtcagtcgaatcctataaagcaggtaccttttattggt |
34626316 |
T |
|
| Q |
208 |
gcttaataattaaaattttattctattgaatctatccatacatttaaacaaatgttttaaaatttctttcatagatttctctcgaatgtaccgtcatcgc |
307 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
34626317 |
gcttaataattaaaattttattctatcgaatctatccatacatttaaacaaatgttttaaaatttctttcatagatttctctcgaatgtaccgtcatccc |
34626416 |
T |
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| Q |
308 |
ctttttccatatgcataggcaacctttgcttctccactgaattttgtattgaaaaactgtcttcgatcgaatccaaatataattggtctagcttgtgttt |
407 |
Q |
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|||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34626417 |
ctttttccatatgcataggcaacctttgtttatcc-gtgaattttgtattgaaaaactgtcttcgatcgaatccaaatataattggtctagcttgtgttt |
34626515 |
T |
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| Q |
408 |
aagagtctctttactacacaaggtgtaattaataataatttgttatcacatttagtctgtcagtgcatgctttcctc |
484 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34626516 |
aagagtctctttactacacaaggtgtaat---taataatttgttatcacatttagtctgtcagtgcatgctttcctc |
34626589 |
T |
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