View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10730_2 (Length: 730)

Name: NF10730_2
Description: NF10730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10730_2
NF10730_2
[»] chr5 (29 HSPs)
chr5 (28-562)||(9842591-9843129)
chr5 (437-635)||(9825709-9825907)
chr5 (557-713)||(9849479-9849635)
chr5 (422-513)||(10560018-10560111)
chr5 (241-334)||(14495767-14495860)
chr5 (241-334)||(16773828-16773921)
chr5 (28-79)||(23556011-23556062)
chr5 (241-334)||(19949578-19949670)
chr5 (241-334)||(29075802-29075895)
chr5 (290-334)||(1410670-1410714)
chr5 (241-312)||(27840981-27841052)
chr5 (248-334)||(29692355-29692441)
chr5 (244-334)||(43241647-43241737)
chr5 (248-334)||(43442217-43442303)
chr5 (291-334)||(6844750-6844793)
chr5 (275-334)||(25627078-25627137)
chr5 (274-324)||(12883871-12883921)
chr5 (277-334)||(30883196-30883253)
chr5 (290-334)||(8278286-8278330)
chr5 (291-339)||(18169844-18169892)
chr5 (275-331)||(25979194-25979250)
chr5 (241-313)||(35982730-35982802)
chr5 (275-334)||(18437106-18437165)
chr5 (488-555)||(19604922-19604988)
chr5 (248-334)||(22020831-22020917)
chr5 (285-334)||(87429-87478)
chr5 (275-316)||(14285200-14285241)
chr5 (277-334)||(16457831-16457888)
chr5 (241-334)||(30109271-30109363)
[»] chr7 (37 HSPs)
chr7 (241-333)||(20335793-20335885)
chr7 (241-334)||(25590632-25590725)
chr7 (241-334)||(26526311-26526403)
chr7 (270-334)||(22760884-22760948)
chr7 (275-334)||(41519260-41519319)
chr7 (241-331)||(279916-280005)
chr7 (248-334)||(15137574-15137660)
chr7 (248-334)||(18056744-18056830)
chr7 (273-334)||(2446329-2446390)
chr7 (241-334)||(24513818-24513911)
chr7 (277-334)||(37085547-37085604)
chr7 (278-334)||(8108602-8108658)
chr7 (290-334)||(23301613-23301657)
chr7 (28-76)||(42434920-42434968)
chr7 (275-334)||(26459406-26459465)
chr7 (271-334)||(45709700-45709763)
chr7 (275-325)||(9871282-9871332)
chr7 (284-334)||(48771959-48772009)
chr7 (274-327)||(3174955-3175008)
chr7 (273-334)||(5668565-5668626)
chr7 (273-334)||(33362653-33362714)
chr7 (277-334)||(43590928-43590985)
chr7 (275-331)||(23552142-23552198)
chr7 (283-331)||(26703149-26703197)
chr7 (273-325)||(37117148-37117200)
chr7 (275-314)||(2882991-2883030)
chr7 (275-330)||(17041008-17041063)
chr7 (275-334)||(18363717-18363776)
chr7 (275-334)||(25655224-25655283)
chr7 (275-334)||(43215205-43215264)
chr7 (273-315)||(7309396-7309438)
chr7 (284-334)||(7801201-7801251)
chr7 (275-329)||(42262091-42262145)
chr7 (241-334)||(25132341-25132433)
chr7 (280-325)||(27776202-27776247)
chr7 (281-334)||(28236583-28236636)
chr7 (241-334)||(35513487-35513580)
[»] chr6 (23 HSPs)
chr6 (79-144)||(27917816-27917882)
chr6 (79-144)||(27921628-27921694)
chr6 (79-144)||(27913261-27913327)
chr6 (241-334)||(6385883-6385976)
chr6 (241-334)||(3779360-3779453)
chr6 (241-334)||(33549125-33549218)
chr6 (274-334)||(11423587-11423647)
chr6 (241-334)||(12234469-12234562)
chr6 (274-331)||(12633033-12633090)
chr6 (293-334)||(24641204-24641245)
chr6 (241-334)||(31622953-31623046)
chr6 (243-334)||(30127421-30127512)
chr6 (241-320)||(32050318-32050397)
chr6 (275-325)||(15951298-15951348)
chr6 (241-334)||(28363958-28364051)
chr6 (290-334)||(6758433-6758477)
chr6 (295-334)||(9433606-9433645)
chr6 (269-315)||(19162823-19162869)
chr6 (248-314)||(28841455-28841521)
chr6 (241-334)||(1906514-1906607)
chr6 (277-334)||(21418491-21418548)
chr6 (273-314)||(24507530-24507571)
chr6 (275-332)||(34786450-34786507)
[»] chr8 (27 HSPs)
chr8 (241-334)||(968383-968476)
chr8 (275-334)||(23361645-23361704)
chr8 (241-312)||(11928693-11928764)
chr8 (248-334)||(2203513-2203599)
chr8 (241-331)||(31087220-31087310)
chr8 (277-334)||(16852361-16852418)
chr8 (241-333)||(29431033-29431125)
chr8 (274-334)||(35641896-35641956)
chr8 (275-334)||(6536541-6536600)
chr8 (275-334)||(30483880-30483939)
chr8 (241-334)||(1157080-1157173)
chr8 (273-334)||(3624601-3624662)
chr8 (241-334)||(11819797-11819890)
chr8 (241-334)||(27750751-27750844)
chr8 (279-351)||(29858049-29858124)
chr8 (241-333)||(11492035-11492127)
chr8 (244-328)||(29018004-29018087)
chr8 (275-334)||(7140730-7140789)
chr8 (290-329)||(35583625-35583664)
chr8 (275-334)||(35690060-35690119)
chr8 (272-334)||(22193357-22193419)
chr8 (241-331)||(31088697-31088787)
chr8 (277-334)||(8059653-8059710)
chr8 (277-334)||(19703485-19703542)
chr8 (241-322)||(24675474-24675555)
chr8 (241-334)||(28783081-28783174)
chr8 (285-330)||(44780120-44780165)
[»] chr3 (38 HSPs)
chr3 (241-334)||(4844473-4844566)
chr3 (241-334)||(4870169-4870262)
chr3 (241-334)||(10499071-10499164)
chr3 (241-334)||(38550366-38550459)
chr3 (241-334)||(51903840-51903933)
chr3 (241-331)||(13808847-13808937)
chr3 (241-330)||(10445101-10445190)
chr3 (275-334)||(36720402-36720461)
chr3 (277-334)||(14339631-14339688)
chr3 (248-332)||(28531027-28531111)
chr3 (241-325)||(44743817-44743901)
chr3 (275-334)||(2667883-2667942)
chr3 (243-314)||(19716238-19716309)
chr3 (276-334)||(30311327-30311385)
chr3 (241-327)||(30715770-30715855)
chr3 (274-351)||(31520600-31520680)
chr3 (270-327)||(39253725-39253782)
chr3 (277-334)||(47454615-47454672)
chr3 (241-334)||(47810707-47810799)
chr3 (285-334)||(49494152-49494201)
chr3 (275-316)||(53412984-53413025)
chr3 (270-334)||(46518649-46518713)
chr3 (275-334)||(4222162-4222221)
chr3 (275-334)||(21960572-21960631)
chr3 (275-334)||(27093357-27093416)
chr3 (275-334)||(37788461-37788520)
chr3 (284-334)||(2597225-2597275)
chr3 (264-334)||(17108883-17108953)
chr3 (275-325)||(28703400-28703450)
chr3 (290-351)||(31608535-31608594)
chr3 (293-331)||(31788984-31789022)
chr3 (276-322)||(52769980-52770026)
chr3 (241-334)||(5499369-5499462)
chr3 (241-334)||(8075089-8075182)
chr3 (277-330)||(8501571-8501624)
chr3 (273-314)||(14186688-14186729)
chr3 (270-331)||(27259185-27259246)
chr3 (241-334)||(51766917-51767009)
[»] chr2 (30 HSPs)
chr2 (241-334)||(28846712-28846805)
chr2 (241-324)||(25637182-25637265)
chr2 (241-334)||(12086091-12086184)
chr2 (277-334)||(39715013-39715070)
chr2 (248-334)||(42327364-42327450)
chr2 (241-334)||(23230567-23230660)
chr2 (274-334)||(7799030-7799090)
chr2 (247-334)||(41202271-41202358)
chr2 (244-334)||(29197341-29197431)
chr2 (241-327)||(30907590-30907676)
chr2 (248-334)||(38551789-38551875)
chr2 (241-334)||(19016052-19016145)
chr2 (241-334)||(21195638-21195731)
chr2 (277-334)||(23052521-23052578)
chr2 (259-316)||(33839240-33839297)
chr2 (241-334)||(37480096-37480189)
chr2 (241-334)||(42602575-42602668)
chr2 (274-334)||(18259751-18259811)
chr2 (275-335)||(19244129-19244189)
chr2 (291-334)||(1729837-1729880)
chr2 (275-334)||(5147675-5147734)
chr2 (275-334)||(11251108-11251167)
chr2 (241-304)||(16951429-16951492)
chr2 (241-304)||(17022094-17022157)
chr2 (273-331)||(4262296-4262354)
chr2 (276-334)||(32650593-32650651)
chr2 (241-331)||(42860372-42860462)
chr2 (248-313)||(360712-360777)
chr2 (277-334)||(29503292-29503349)
chr2 (285-334)||(34041594-34041643)
[»] scaffold0299 (1 HSPs)
scaffold0299 (258-334)||(11549-11625)
[»] chr4 (37 HSPs)
chr4 (248-334)||(19238546-19238632)
chr4 (241-332)||(51948503-51948594)
chr4 (241-334)||(28635717-28635810)
chr4 (241-334)||(49576856-49576949)
chr4 (241-330)||(51954139-51954228)
chr4 (28-76)||(54079119-54079167)
chr4 (277-351)||(47044718-47044795)
chr4 (241-320)||(51969052-51969131)
chr4 (277-334)||(39509091-39509148)
chr4 (279-331)||(32046664-32046716)
chr4 (275-334)||(13015448-13015507)
chr4 (275-334)||(37109347-37109406)
chr4 (279-334)||(38869789-38869844)
chr4 (284-334)||(24827846-24827896)
chr4 (241-334)||(13496262-13496355)
chr4 (277-334)||(30938217-30938274)
chr4 (241-334)||(51250484-51250577)
chr4 (241-333)||(7949416-7949508)
chr4 (290-334)||(21660155-21660199)
chr4 (290-334)||(21668919-21668963)
chr4 (275-331)||(23377980-23378036)
chr4 (290-334)||(31759669-31759713)
chr4 (278-334)||(43728416-43728472)
chr4 (274-334)||(52254399-52254459)
chr4 (275-334)||(4249198-4249257)
chr4 (241-331)||(8931046-8931136)
chr4 (248-334)||(9936930-9937016)
chr4 (241-331)||(12821992-12822082)
chr4 (242-332)||(42644873-42644963)
chr4 (248-334)||(55427169-55427255)
chr4 (241-334)||(8030166-8030259)
chr4 (280-329)||(14451747-14451796)
chr4 (275-351)||(19680784-19680863)
chr4 (291-332)||(24124067-24124108)
chr4 (241-330)||(37274421-37274510)
chr4 (241-314)||(46295138-46295211)
chr4 (301-334)||(56236937-56236970)
[»] scaffold0258 (1 HSPs)
scaffold0258 (241-334)||(15285-15378)
[»] scaffold0118 (1 HSPs)
scaffold0118 (248-334)||(41602-41688)
[»] chr1 (47 HSPs)
chr1 (273-331)||(12587294-12587352)
chr1 (28-78)||(41703375-41703425)
chr1 (248-334)||(51814515-51814601)
chr1 (241-334)||(16893415-16893508)
chr1 (28-77)||(41697782-41697831)
chr1 (261-331)||(12259284-12259354)
chr1 (241-334)||(21547442-21547535)
chr1 (241-334)||(31794226-31794319)
chr1 (241-334)||(40257420-40257513)
chr1 (277-334)||(52116779-52116836)
chr1 (241-334)||(52336736-52336829)
chr1 (275-331)||(3265948-3266004)
chr1 (28-76)||(8017225-8017273)
chr1 (276-332)||(15786317-15786373)
chr1 (275-334)||(8177178-8177237)
chr1 (275-334)||(9165191-9165250)
chr1 (275-334)||(28411351-28411410)
chr1 (275-334)||(33700769-33700828)
chr1 (241-331)||(4280413-4280503)
chr1 (241-334)||(1094546-1094639)
chr1 (241-334)||(6122815-6122908)
chr1 (275-332)||(8904437-8904494)
chr1 (241-334)||(9643771-9643864)
chr1 (241-334)||(17410252-17410345)
chr1 (275-332)||(21267989-21268046)
chr1 (241-334)||(24047064-24047157)
chr1 (241-334)||(25494031-25494124)
chr1 (275-334)||(2799883-2799942)
chr1 (241-316)||(6948039-6948114)
chr1 (248-331)||(9964462-9964545)
chr1 (275-334)||(10150865-10150924)
chr1 (291-334)||(25297793-25297836)
chr1 (274-313)||(26232356-26232395)
chr1 (241-312)||(30203189-30203260)
chr1 (276-334)||(7219915-7219973)
chr1 (290-328)||(17439944-17439982)
chr1 (276-334)||(31383795-31383853)
chr1 (241-334)||(9117140-9117233)
chr1 (293-334)||(10334104-10334145)
chr1 (273-334)||(12370185-12370245)
chr1 (277-334)||(16169976-16170033)
chr1 (277-334)||(19528325-19528382)
chr1 (277-334)||(27223128-27223185)
chr1 (241-314)||(29738239-29738312)
chr1 (293-334)||(44046162-44046203)
chr1 (241-334)||(44126416-44126509)
chr1 (248-329)||(45266860-45266941)
[»] scaffold0194 (1 HSPs)
scaffold0194 (261-334)||(13028-13101)
[»] scaffold0211 (1 HSPs)
scaffold0211 (241-334)||(24074-24167)
[»] scaffold0008 (1 HSPs)
scaffold0008 (273-333)||(49328-49388)
[»] scaffold1367 (1 HSPs)
scaffold1367 (275-334)||(836-895)
[»] scaffold0002 (1 HSPs)
scaffold0002 (275-334)||(94967-95026)
[»] scaffold0021 (1 HSPs)
scaffold0021 (292-334)||(157000-157042)
[»] scaffold0471 (1 HSPs)
scaffold0471 (291-332)||(8654-8695)
[»] scaffold0337 (1 HSPs)
scaffold0337 (273-314)||(1794-1835)
[»] scaffold0291 (1 HSPs)
scaffold0291 (277-334)||(2468-2525)
[»] scaffold0238 (1 HSPs)
scaffold0238 (241-314)||(2673-2746)
[»] scaffold0172 (1 HSPs)
scaffold0172 (241-334)||(15739-15832)


Alignment Details
Target: chr5 (Bit Score: 442; Significance: 0; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 28 - 562
Target Start/End: Original strand, 9842591 - 9843129
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactgtttatttatatttgttttgccctcatgagatcagacttgatgtttaataaa 127  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842591 ttctctcgtgcaattcatgtggtgcttgttgcaccatataacacaactgtttatttatatttgttttgccctcatgagatcagacttgatgtttaataaa 9842690  T
Q  128 atttgagaaattctcaaaattttgccaatgtgtcattttatcttattcttaagtggattctgcacaagttgccttagaggtaatcttgaacttgcagnnn 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  9842691 atttgagaaattctcaaaattttgccaatgtgtcattttatcttattcttaagtggattctgcacaagttgccttagaggtaatcttgaacttgcagttt 9842790  T
Q  228 nnnnnnnnnnnnn----aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatccca 323  Q
                     ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9842791 ttatttttattttttttaagaagttaaattagcctatctaaattatcatcggagagatttgaacccgagacctcgaggaggagcacactcccaagtccca 9842890  T
Q  324 agtcaataccaggccattccaagtgggtctgaacttgcagttttatttagtgatccatcgattcctccaaaaatggatcctagccttagaggttgtgaac 423  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842891 agtcaatatcaggccatcccaactgggtctgaacttgcagttttatttagtgatccatcgattcctccaaaaatggatcctagccttagaggttgtgaac 9842990  T
Q  424 aaaaatattgataatataataagtccactattgcattcattaaatatatgcttgatattacatgaatgatggattgatgcattcaaatggtaaaacaaga 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842991 aaaaatattgataatataataagtccactattgcattcattaaatatatgcttgatattacatgaatgatggattgatgcattcaaatggtaaaacaaga 9843090  T
Q  524 ggaaaatttatcaaacaattttacacttgtgacttgagt 562  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9843091 ggaaaatttatcaaacaattttacacttgtgacttgagt 9843129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 437 - 635
Target Start/End: Complemental strand, 9825907 - 9825709
Alignment:
Q  437 atataataagtccactattgcattcattaaatatatgcttgatattacatgaatgatggattgatgcattcaaatggtaaaacaagaggaaaatttatca 536  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9825907 atataataagcccactattgcattcattaaatatatgcttgatattacatgaatgatggattgatgcattcaaatggtaaaacaagagaaaaatttatca 9825808  T
Q  537 aacaattttacacttgtgacttgagtcttgttgaacttgcagtgcatcgtattgcacactgtttctcaaattactgcagaaatttagttcggcttggat 635  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  9825807 aacaattttacacttgtgacttgagtctagttgaacttgcagtgcatcgtattgcacactgtttctcaaattactgcagaaatttatttcagcttggat 9825709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 557 - 713
Target Start/End: Original strand, 9849479 - 9849635
Alignment:
Q  557 ttgagtcttgttgaacttgcagtgcatcgtattgcacactgtttctcaaattactgcagaaatttagttcggcttggatgatgaaaatgaaatattactt 656  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9849479 ttgagtcttgttgaacttgcagtgcatcgtattgcacactgtttctcaaattactgcagaaatttagttcggcttggatgatgaaaatgaaatattactt 9849578  T
Q  657 tgtaagcaactacaatctcaattttcttaccagtgagaaaagtgtttctgatgatgt 713  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9849579 tgtaagcaactacaatctcaattttcttaccagtgagaaaagtgtttctgattatgt 9849635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 422 - 513
Target Start/End: Complemental strand, 10560111 - 10560018
Alignment:
Q  422 acaaaaatattgataatataataagtccactattgcattcattaa--atatatgcttgatattacatgaatgatggattgatgcattcaaatgg 513  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||  |||||| |||||| |||||||||||||||||| || |||| ||||||    
T  10560111 acaaaagtattgataatataataagtccagtattgcattcatcaaatatatatacttgatgttacatgaatgatggattaatacattaaaatgg 10560018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 14495767 - 14495860
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||| ||||| ||| |||||  |||||||||||||  || | ||||||||||||||||||||||||||| |||||||||||||||||    
T  14495767 aagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaatacca 14495860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 16773921 - 16773828
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | | |||||  |||| |||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatacca 16773828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 23556062 - 23556011
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactgttt 79  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23556062 ttctctcgtgcaattcgtgtggtgcttgtcgcaccatatagcacaactgttt 23556011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 19949578 - 19949670
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||| |||||||||||  || ||| || ||||||||| |||| |||||||||||||||||| | | ||| |||||||||||||    
T  19949578 aagaagttaaattagtctatccaaattgacaccggtgaaaattgaacctgagagctcgaggaggagcacact-ctagatctcaagtcaatacca 19949670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 29075895 - 29075802
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| ||| |||||  || | |||||||| ||||  |||| |||||||||||||||||||||| |||||||| ||||||||    
T  29075895 aagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaatacca 29075802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 1410670 - 1410714
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  1410670 gagacctcgaggaggagcacactcccatatcccaagtcaatacca 1410714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 27840981 - 27841052
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacact 312  Q
    |||||| |||||||||| |||||||||| || | |||||||| ||||| |||| ||||||||||||||||||    
T  27840981 aagaagctaaattagcccatccaaattaacaccagagagaatcgaaccggagatctcgaggaggagcacact 27841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 29692355 - 29692441
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| | | |||||||  |||||||||||||| |||| ||||| | ||||||||||||||||||| |||||||  ||||||||    
T  29692355 taaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaatacca 29692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 43241647 - 43241737
Alignment:
Q  244 aagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||| | | | |||||  ||||| ||||||||||||| |||||||| |||| | ||||||||| | |||||||||||||||||    
T  43241647 aagttaaattagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaatacca 43241737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 43442303 - 43442217
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| |||||||||  || | |||||||| ||||| ||||||| ||||||||||||||||||| ||| |||  ||||||||    
T  43442303 taaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaatacca 43442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 6844793 - 6844750
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  6844793 agacctcgaggaggaacacactcccaaattccaagtcaatacca 6844750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 25627137 - 25627078
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| | ||||| ||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaatacca 25627078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 12883921 - 12883871
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaa 324  Q
    ||||||||||||||  |||||||| |||||||||||||||||| |||||||    
T  12883921 ggagagaattgaacatgagacctcaaggaggagcacactcccagatcccaa 12883871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 30883196 - 30883253
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||  ||||||| |||||||||||||||||||  ||||||| ||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaatacca 30883253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 8278286 - 8278330
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  8278286 gagatctcgaggaggagcacactcccaagtcccaagccaatacca 8278330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 18169844 - 18169892
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaataccaggcca 339  Q
    ||||| ||| ||||| |||||||||| ||||||||||||||||||||||    
T  18169844 agaccacgaagaggaccacactcccagatcccaagtcaataccaggcca 18169892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 25979250 - 25979194
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||| ||||| ||||||| ||||||||| |||||||||||| ||||| |||||    
T  25979250 gagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 35982802 - 35982730
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactc 313  Q
    |||||| |||||||||  |||||||||| ||||||| ||||| ||||| ||||| |||  |||||||||||||    
T  35982802 aagaagctaaattagcgcatccaaattagcatcggatagaatcgaacctgagacatcgtagaggagcacactc 35982730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 18437165 - 18437106
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| |||||||| || | |||||||||||||||| ||| |||||||| |||||||    
T  18437165 gagagaatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaatacca 18437106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 555
Target Start/End: Original strand, 19604922 - 19604988
Alignment:
Q  488 aatgatggattgatgcattcaaatggtaaaacaagaggaaaatttatcaaacaattttacacttgtga 555  Q
    ||||||| ||| |||||||||||| | || ||||||| |||||||| ||||| |||||||||||||||    
T  19604922 aatgatgaattcatgcattcaaatagcaagacaagag-aaaatttagcaaactattttacacttgtga 19604988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 22020831 - 22020917
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | | |||||| ||  ||||||||| ||| | ||||| || |||||||||||||||||| ||||||||  |||||||    
T  22020831 taaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaatacca 22020917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 87429 - 87478
Alignment:
Q  285 aacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||| ||||||||||||||||||| || ||||| ||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaatacca 87478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 14285241 - 14285200
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactccca 316  Q
    |||||||| ||||| ||||||| |||||||||||||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactccca 14285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16457888 - 16457831
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||  ||||||| ||||||||||||||||| |  ||||||| ||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaatacca 16457831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 30109271 - 30109363
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | | |||||| || ||| | |||| ||||| |||||||| ||||||||||||||||||  || |||| ||||||||    
T  30109271 aagaagctaaattagcccacctaaattagcaccgggg-gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaatacca 30109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 20335793 - 20335885
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc 333  Q
    ||||||||||||||||| |||||||||  |||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  20335793 aagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacc 20335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 25590725 - 25590632
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |  ||||||  || || ||| ||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  25590725 aagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaatacca 25590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 26526403 - 26526311
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| || |||||||||  || ||||||||||  |||||||||  | |||||||||||||||| ||||||| ||||||||||||    
T  26526403 aagaagttaaattaacccatccaaattgacaccggagagaatc-aacccgagattttgaggaggagcacactctcaaatcctaagtcaatacca 26526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 22760948 - 22760884
Alignment:
Q  270 catcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||||||  ||||||||||||||||    
T  22760948 catcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaatacca 22760884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 41519260 - 41519319
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||  ||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  41519260 gagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaatacca 41519319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 279916 - 280005
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||| |||||||||| | |||||||  || |||||||||||||||| |||||||  |||||||| |||||||| ||||||||| |||||    
T  279916 aagaagctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccc-aatcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 15137660 - 15137574
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  || | ||||||||  |||| ||||||| ||||||||||||||||| ||||||||||||| |||||    
T  15137660 taaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtacca 15137574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 18056744 - 18056830
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||| || ||| |||||| ||||| |||||||  |||||||||||||||| ||  |||||||||||||||    
T  18056744 taaattagcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaatacca 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 2446390 - 2446329
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| ||||  |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  2446390 cggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaatacca 2446329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 24513911 - 24513818
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||| | |||||||  |||| | || ||| ||||| |||||||| ||||| || ||||||||||||| |||| ||||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaatacca 24513818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 37085547 - 37085604
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| || |||||||||| |||||||||||||||||||||| ||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaatacca 37085604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 8108658 - 8108602
Alignment:
Q  278 agaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||||| |||||||| ||||||||| |||||||| |||||||||||||||||    
T  8108658 agaatcgaacctgagacctcaaggaggagcgcactcccatatcccaagtcaatacca 8108602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 23301613 - 23301657
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  23301613 gagacctcaaggaggagcacactcccaagtcccaagtcaatacca 23301657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 42434920 - 42434968
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactg 76  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  42434920 ttctctcgtgcaattcgtgcggtgcttgtcgcatcatatagcacaactg 42434968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 26459406 - 26459465
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| |||||||||||||||||||  ||||||| ||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacca 26459465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 45709700 - 45709763
Alignment:
Q  271 atcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||| ||||| |||||||||||||||||||||||| || ||||||||  |||||||    
T  45709700 atcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaatacca 45709763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 9871282 - 9871332
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    |||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  9871282 gagagaatcgaatctgagacttcgaggaggagcacactcccaaatcccaag 9871332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 48772009 - 48771959
Alignment:
Q  284 gaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| |||||||| |||||||||||||||||| |||||||| ||||||||    
T  48772009 gaacctgagacctcaaggaggagcacactcccagatcccaagccaatacca 48771959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 3175008 - 3174955
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtc 327  Q
    ||||||||| ||||| |||||||||||  |||||||||||||| ||||||||||    
T  3175008 ggagagaatcgaacctgagacctcgagatggagcacactcccagatcccaagtc 3174955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 5668565 - 5668626
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| || || ||||||||||||||||||||||| |||  ||||||| ||||||||    
T  5668565 cggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 33362714 - 33362653
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||||||||||  | |||||||||||||||||| || |||||| |||||||||||||    
T  33362714 cggagggaattgaacctcaaacctcgaggaggagcacattctcaaatctcaagtcaatacca 33362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 43590985 - 43590928
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||| | |||||||||||||||||||| ||||||| ||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaatacca 43590928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 23552198 - 23552142
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||| ||||  ||||||| |||||||||||||||||||  |||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 26703197 - 26703149
Alignment:
Q  283 tgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||| ||||||||||| ||||||||||||||| |||||||| |||||    
T  26703197 tgaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 37117148 - 37117200
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    |||||||||| |||||||| ||||| |||||||| ||||||||||||| ||||    
T  37117148 cggagagaatcgaacccgaaacctcaaggaggagtacactcccaaatctcaag 37117200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 2883030 - 2882991
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  2883030 gagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 17041008 - 17041063
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||||||| ||||| ||||||| ||||||||||||||| ||| |||||||| ||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 18363776 - 18363717
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||  |||| ||||||| ||||||||||||||||||||||| |||| | ||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctatacca 18363717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 25655224 - 25655283
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| || |||| |||||||| ||||||| || |||||||||||||||||    
T  25655224 gagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaatacca 25655283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 43215264 - 43215205
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |  ||||||| ||||||||    
T  43215264 gagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacca 43215205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 315
Target Start/End: Complemental strand, 7309438 - 7309396
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactccc 315  Q
    |||||||||| ||||  ||||||||||||||||||||||||||    
T  7309438 cggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 7801251 - 7801201
Alignment:
Q  284 gaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||||||| || ||||||||||||||||  ||||||||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaatacca 7801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 42262091 - 42262145
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaa 329  Q
    |||||||||||| | |||||||  ||||||||||||||| || ||||||||||||    
T  42262091 gagagaattgaatctgagacctttaggaggagcacactctcagatcccaagtcaa 42262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 25132341 - 25132433
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||| ||| || |||||| ||||| |||||||  || ||||||||||||| |  ||| ||||||||||||    
T  25132341 aagaagctaaattagcccacccaaattagcattgg-gagaatcgaacctgagaccttaagaaggagcacactcctaggtcctaagtcaatacca 25132433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 27776247 - 27776202
Alignment:
Q  280 aattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||||    
T  27776247 aattgaacctgagacttcgaggaggagcacactctcaagtcccaag 27776202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 28236583 - 28236636
Alignment:
Q  281 attgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||  |||||||||||||||||| ||||||||  ||||||| ||||||||    
T  28236583 attgaactagagacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 35513580 - 35513487
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||| | | | |||||| ||||||||| ||| ||||  ||||  |||||||||||||||||| ||| |||||||  |||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaatacca 35513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 27917816 - 27917882
Alignment:
Q  79 tatttatatttgttttgccctcatgaga-tcagacttgatgtttaataaaatttgagaaattctcaa 144  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  27917816 tatttatatttgttttgccgtcatgagaatcagacttgatgtttaataaaatttgagaaattctcaa 27917882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 27921628 - 27921694
Alignment:
Q  79 tatttatatttgttttgccctcatgaga-tcagacttgatgtttaataaaatttgagaaattctcaa 144  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  27921628 tatttatatttgttttgccgtcatgagaatcagacttgatgtttaataaaatttgagaaattctcaa 27921694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 27913327 - 27913261
Alignment:
Q  79 tatttatatttgttttgccctcatgaga-tcagacttgatgtttaataaaatttgagaaattctcaa 144  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  27913327 tatttatatttgttttgccgtcataagaatcagacttgatgtttaataaaatttgagaaattctcaa 27913261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 6385976 - 6385883
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||| || |||||||||| ||||| |||||||  |||||||||||| |||||  ||||||||||||||||    
T  6385976 aagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatacca 6385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 3779453 - 3779360
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| |||||| |||||  |||| ||| |||||||| | ||||||| ||| |||||||||||||||| || |||| ||||||||    
T  3779453 aagaagttaaattatcctatcaaaattgacatcagagggaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaatacca 3779360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 33549218 - 33549125
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||  | | |||||  |||| |||||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 33549125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 11423647 - 11423587
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  11423647 ggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaatacca 11423587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 12234469 - 12234562
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||||| || ||| |||||  ||  ||||||||| ||||| |||||||||||  ||||||||||||||  ||||||||||||||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaatacca 12234562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 12633090 - 12633033
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    ||||||||| ||||  |||| ||||| |||||||||||||||||||||||||||||||    
T  12633090 ggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaata 12633033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 24641204 - 24641245
Alignment:
Q  293 acctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaatacca 24641245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 31622953 - 31623046
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || ||||| || |  |||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  31622953 aagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 31623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 30127512 - 30127421
Alignment:
Q  243 gaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||| |||| | |||||  || |||| ||||| ||||| |||||||||| |||||||||||||||| | |||||| ||||||||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaatacca 30127421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 32050318 - 32050397
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatc 320  Q
    ||||| ||||||||||||| |||||||  ||||||| ||||| | | | ||||||| |||||||| ||||||||||||||    
T  32050318 aagaaattaaattagcctacccaaattgacatcggaaagaatcggatctgagaccttgaggaggatcacactcccaaatc 32050397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 15951298 - 15951348
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  15951298 gagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaag 15951348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 28364051 - 28363958
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||||||||||| |||||||||  || | |||| ||| ||| | ||||||| |||||||||||||||| || |||||||  ||||||||    
T  28364051 aagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaatacca 28363958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 6758433 - 6758477
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||    
T  6758433 gagacctcgaggtggagcacactcccaaatcctaagccaatacca 6758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 9433606 - 9433645
Alignment:
Q  295 ctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  9433606 ctcgaggaagagcacactcccagatcccaagtcaatacca 9433645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 19162869 - 19162823
Alignment:
Q  269 tcatcggagagaattgaacccgagacctcgaggaggagcacactccc 315  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  19162869 tcataggagagaatcgaacctgagatctcgaggaggagcacactccc 19162823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 28841521 - 28841455
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||||||| ||| |||||  || |||||||||| ||||  ||||||| |||||||||||||||||    
T  28841521 taaattagccaatctaaattgacaccggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 1906607 - 1906514
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||  |||||||||| ||  | | ||||| ||||  ||||||| ||||||||||| | ||| |  ||||||||||||||||    
T  1906607 aagaagttaaattagctaatccaaattagcactgaaaagaatcgaacttgagaccttgaggaggagcataatccaatgtcccaagtcaatacca 1906514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 21418548 - 21418491
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||  ||||| | |||||||||||||||||||| ||||||| ||||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaatacca 21418491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 24507530 - 24507571
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    ||||||||||||||||| |||||| ||||||||||| |||||    
T  24507530 cggagagaattgaaccctagaccttgaggaggagcaaactcc 24507571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 34786450 - 34786507
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    |||||||| ||||  ||||| ||||| ||||||||||||||| |||||||| ||||||    
T  34786450 gagagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 968476 - 968383
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | | |||||  ||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 968383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 23361645 - 23361704
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  23361645 gagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaatacca 23361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 11928693 - 11928764
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacact 312  Q
    |||||||||||||| || |||||||||  ||||||  ||||| ||||| |||||||||||||||||||||||    
T  11928693 aagaagttaaattaacccatccaaattgacatcggtaagaatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 2203599 - 2203513
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  || ||| ||||||||| || ||||||| |||||||||||||||||||  ||||||| ||||||||    
T  2203599 taaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaatacca 2203513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 31087220 - 31087310
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    ||||||||||||||||||||  |||||  || |||||| ||| ||||| ||||||||||||||| | | ||||||| |||||||| |||||    
T  31087220 aagaagttaaattagcctatttaaattgacaccggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16852418 - 16852361
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 16852361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 29431125 - 29431033
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc 333  Q
    |||||| |||||||||| |  ||||||| || |  ||||||| ||||| ||| |||| ||||||||||||||||||| ||||||| |||||||    
T  29431125 aagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaatacc 29431033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 35641896 - 35641956
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||| |||| | ||||||    
T  35641896 ggagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgatacca 35641956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 6536600 - 6536541
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| ||||||| ||||||||||||||||| |  ||||||| ||||||||    
T  6536600 gagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacca 6536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 30483880 - 30483939
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| |||||   ||||||||||||||||||| |||||||| ||||||||    
T  30483880 gagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaatacca 30483939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 1157173 - 1157080
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||  |||||||||   |||||||||||||||||  ||||| || || |||||||||||  ||  | ||||||||||||||    
T  1157173 aagaagttaaattagctcatccaaattggtatcggagagaattgaacttgagacatcaagaaggagcacactttcaggttccaagtcaatacca 1157080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 3624662 - 3624601
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| ||||| ||||||| || ||||||||||||||||  ||||||| ||||||||    
T  3624662 cggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaatacca 3624601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 11819890 - 11819797
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  ||   ||| |||| ||||| ||||||| |||||||||||||||||||| ||||||| | ||||||    
T  11819890 aagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatacca 11819797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 27750844 - 27750751
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||| | |||||||||  ||   ||| |||| ||||| ||||||| |||||||||||||||||||| ||||||| | ||||||    
T  27750844 aagaagctaaattagtccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatacca 27750751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 29858049 - 29858124
Alignment:
Q  279 gaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat---accaggccattccaagtgggt 351  Q
    |||| ||||| ||||||||||||||||||||||||||   ||||||| ||||   ||||||||| |||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 11492035 - 11492127
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc 333  Q
    |||||| |||||||||| | |||||||  ||  | ||||||| |||||  |||||||||| ||||||||||||||| ||| |||| |||||||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatacc 11492127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 29018004 - 29018087
Alignment:
Q  244 aagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtca 328  Q
    |||||||||||||  |||||||||| |||||| |||||||||||| ||||  |  |||||||||| |||||||  ||||||||||    
T  29018004 aagttaaattagctcatccaaattaacatcggggagaattgaacctgagattttaaggaggagca-actcccaggtcccaagtca 29018087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 7140789 - 7140730
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||| | |||| ||||||||||||||||| |||| |||||||| ||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaatacca 7140730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 35583664 - 35583625
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaa 329  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  35583664 gagacctcgaggaggagcaaactcccaagtcccaagtcaa 35583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 35690060 - 35690119
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| ||||||||||| || |||| |||||||| ||||||||    
T  35690060 gagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatacca 35690119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 22193357 - 22193419
Alignment:
Q  272 tcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||   |||||||||| ||||    
T  22193357 tcggagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacacca 22193419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 31088787 - 31088697
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    ||||||||||||||||||| | |||||   ||| ||||||||  |||| |||||||||||||  | ||||||| ||  |||||||||||||    
T  31088787 aagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacctcgaggataatcacactcgcaggtcccaagtcaata 31088697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 8059710 - 8059653
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| |||||||| ||||||| || || ||||||||||||||    
T  8059710 gagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaatacca 8059653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 19703485 - 19703542
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| |||||||||||||||| ||  ||||||| ||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatacca 19703542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 24675474 - 24675555
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatccc 322  Q
    |||||||||||||||   |||||||||| |||| |||| ||| ||| | ||||||| ||| |||||||||||| || |||||    
T  24675474 aagaagttaaattagttcatccaaattaacatcagagaaaatcgaatctgagaccttgagaaggagcacactctcagatccc 24675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 28783174 - 28783081
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || ||  |||||| ||||  ||||||| |||||||||||||||||||  || |||| ||||||||    
T  28783174 aagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaatacca 28783081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 44780120 - 44780165
Alignment:
Q  285 aacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||| ||||||| |||||||||||||||||||| ||||||| ||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 4844473 - 4844566
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |  ||||||  || |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||    
T  4844473 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatacca 4844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 4870169 - 4870262
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |  ||||||  || |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||    
T  4870169 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatacca 4870262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 10499071 - 10499164
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  ||||||||||||| ||||| |||||||| |||| ||||| ||||||| |||||||| ||||||||    
T  10499071 aagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaatacca 10499164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 38550366 - 38550459
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||  |||||||||| ||  | |||||||||||||  ||||||| |||||||||||||||||||| || ||||||||||||    
T  38550366 aagaagctaaattagctcatccaaattaacacagaagagaattgaacctcagacctcaaggaggagcacactcccaaaccctaagtcaatacca 38550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 51903840 - 51903933
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |  ||||||  || |||||||||| ||||| |||||| |||||||||||||||||||| |||||||| ||||||||    
T  51903840 aagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 13808847 - 13808937
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||| |||||||  | |||||||||  |||  |||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||    
T  13808847 aagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaata 13808937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 10445101 - 10445190
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||||| |||||||||| |  ||||||| || | |||||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 36720461 - 36720402
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||    
T  36720461 gagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaatacca 36720402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 14339688 - 14339631
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||||| ||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaatacca 14339631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 28531027 - 28531111
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    |||||||||| | |||||||  || | ||||||||||| ||  |||||||||||||||||| ||||||| |||||||| ||||||    
T  28531027 taaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 44743817 - 44743901
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    |||||| ||||||| || | |||||||  ||  ||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 2667942 - 2667883
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| |||||||| ||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatacca 2667883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 19716309 - 19716238
Alignment:
Q  243 gaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||| |||||||||| | ||||||| ||| ||| |||||| ||||| ||||||| |||||||||||||||||    
T  19716309 gaagctaaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactcc 19716238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 30311385 - 30311327
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| ||||| ||||||| ||||||||||||||||||| |||||||| | ||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctatacca 30311327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 30715855 - 30715770
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtc 327  Q
    |||||| |||| ||||| |||||||||  || |||||||||| ||||| || || | |||||||||||||||||||| |||||||||    
T  30715855 aagaagctaaactagcccatccaaattggca-cggagagaatcgaacctgaaacattgaggaggagcacactcccaagtcccaagtc 30715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 31520600 - 31520680
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat---accaggccattccaagtgggt 351  Q
    |||||||||  ||||  |||||||||||||||||||||||||| |||||||| ||||   |||||||||  ||||||||||    
T  31520600 ggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggt 31520680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 39253782 - 39253725
Alignment:
Q  270 catcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtc 327  Q
    |||| |||||||| ||||| ||||||| || |||||||||||||||| ||||||||||    
T  39253782 catcagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagtc 39253725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 47454615 - 47454672
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||||||||||||||||||||| | ||| |||| ||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaatacca 47454672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 47810707 - 47810799
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||| |||| | |||||||  || ||||||||||  |||||||||||| | ||||||||||||||||||  || ||| ||||||||    
T  47810707 aagaagttaaat-agcccacccaaattggcaccggagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaatacca 47810799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 49494152 - 49494201
Alignment:
Q  285 aacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||||||||| ||||||||||||||||  |||||||||||||    
T  49494152 aacctgagacctcgaggaagagcacactcccaaatttcaagtcaatacca 49494201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 53413025 - 53412984
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactccca 316  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactccca 53412984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 46518713 - 46518649
Alignment:
Q  270 catcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||||  |||| || |||| ||||||||||||||||||| |||||||| ||||||||    
T  46518713 catcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaatacca 46518649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 4222221 - 4222162
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| |||||  |||| | ||||||||||||||||||| |||||||| ||||||||    
T  4222221 gagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaatacca 4222162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 21960631 - 21960572
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||| | |||||||||||||||||||||||| ||  ||||||| ||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaatacca 21960572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 27093357 - 27093416
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||  |||| ||||||| |||||||||||||||||||| | ||||| ||||||||    
T  27093357 gagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaatacca 27093416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 37788461 - 37788520
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |  | ||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaatacca 37788520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 2597225 - 2597275
Alignment:
Q  284 gaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| |||||||| |||||||||||||||| |||||| ||| ||||||||    
T  2597225 gaacctgagacctcaaggaggagcacactcctaaatccgaagccaatacca 2597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 17108883 - 17108953
Alignment:
Q  264 aattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| |||| | ||||||  |||| ||||||| ||||||||||||||||||| ||| | |||||||||||    
T  17108883 aattaacatcagggagaatcaaacctgagaccttgaggaggagcacactcccacatctccagtcaatacca 17108953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 28703400 - 28703450
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaag 325  Q
    |||||||| ||||| ||||||| || |||||||||||||||| ||||||||    
T  28703400 gagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 28703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 31608535 - 31608594
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaataccaggccattccaagtgggt 351  Q
    ||||||||||||||||||||||||||| ||| |||| ||  || |||||| |||||||||||    
T  31608535 gagacctcgaggaggagcacactcccagatctcaagcca--actaggccaatccaagtgggt 31608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 31788984 - 31789022
Alignment:
Q  293 acctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaata 31789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 52769980 - 52770026
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatccc 322  Q
    ||||||| ||||| |||||||| |||||||||||||||||| |||||    
T  52769980 agagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 5499369 - 5499462
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||| ||||  |||||  || ||| |||||| |||||  ||||||  ||||||||||||||| || ||| |||||||||||||    
T  5499369 aagaagctaaattagtctattgaaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaatacca 5499462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 8075089 - 8075182
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  ||   ||| |||| ||||| || |||| |||||||||||||||||||| ||||||| | ||||||    
T  8075089 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctatacca 8075182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 8501571 - 8501624
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||||||||||| || || | ||||||||||||||||||| ||| |||||||||    
T  8501571 gagaattgaacctgaaactttgaggaggagcacactcccagatctcaagtcaat 8501624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 14186729 - 14186688
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||||||| ||||| ||||||| |||||||||||||||||    
T  14186729 cggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 27259246 - 27259185
Alignment:
Q  270 catcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||| ||||||||  |||| || ||||||||||||||||||||||||  ||||||| |||||    
T  27259246 catcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 51767009 - 51766917
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| || | ||||||||||  | |||||||||| ||| | || |||| ||||| ||||||||||||| || ||||||||||||||    
T  51767009 aagaagctaaatcagaccatccaaattagtaccggagagaatcgaatctgaaaccttgaggaagagcacactcccagat-ccaagtcaatacca 51766917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 28846805 - 28846712
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||| ||| |||||||  |||||| || ||| ||||| ||||| |||||||||||||||||||||  ||||||||||||||||    
T  28846805 aagaagttaaattagtctacccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaatacca 28846712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 25637265 - 25637182
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaa 324  Q
    ||||||||||||||||| | | |||||  ||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||    
T  25637265 aagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 12086091 - 12086184
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | | |||||| || ||||| |||| ||||||||||||| ||||||||||||||| |||  ||||||| ||||||||    
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaatacca 12086184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 39715070 - 39715013
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatacca 39715013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 42327364 - 42327450
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  || || ||||||| ||||| ||||||| |||||||||||||||||||  ||||||| ||||||||    
T  42327364 taaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacca 42327450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 23230567 - 23230660
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||  |||||||||  ||  ||||||||||||||| |  || | |||||||||||||||||||  |||||| |||||||||    
T  23230567 aagaagttaaattagctcatccaaattgacactggagagaattgaacctggaactttgaggaggagcacactcccagttcccaaatcaatacca 23230660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 7799030 - 7799090
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||| ||| | |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  7799030 ggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaatacca 7799090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 41202358 - 41202271
Alignment:
Q  247 ttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||| | |||||||||  |||| |||| |||||||||  |||| ||||||||||||| ||||||| ||| || ||||||||||    
T  41202358 ttaaattagtccatccaaattgacatcagagaaaattgaacctaagacttcgaggaggagcatactcccagatctcaggtcaatacca 41202271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 29197341 - 29197431
Alignment:
Q  244 aagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| | | |||||  || |||  ||||| ||||  ||||| || ||||||||||||||||||| ||||||||||||||||    
T  29197341 aagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaatacca 29197431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 30907590 - 30907676
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtc 327  Q
    ||||||||||||||| | |  ||||||  |||  |||| ||||||||  ||||| |||||||||||||||||||||| |||||||||    
T  30907590 aagaagttaaattagtcaacacaaattggcataagagaaaattgaacatgagacgtcgaggaggagcacactcccaagtcccaagtc 30907676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 38551875 - 38551789
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| ||| |||||| ||||||||||||| |||| | ||||||  || | ||||||||||||||||  ||| |||||||||    
T  38551875 taaattagccaatctaaattaacatcggagagaatcgaacacaagaccttaagaaagagcacactcccaaatttcaaatcaatacca 38551789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 19016145 - 19016052
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||||||||||   |||||  || ||| ||||||  |||  |||||||||||||||||||||||||||| || |||| ||||||||    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaatacca 19016052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 21195638 - 21195731
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |||||||||  ||   ||| |||| ||||| ||||||| |||||||||||||||||||| | ||||| | ||||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctatacca 21195731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 23052521 - 23052578
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaatacca 23052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 33839240 - 33839297
Alignment:
Q  259 atccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactccca 316  Q
    |||||||||| || | || ||||||||||| ||||||| |||||||||||||||||||    
T  33839240 atccaaattagcaccagaaagaattgaacctgagaccttgaggaggagcacactccca 33839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 37480189 - 37480096
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||   | ||| |||||| ||||| ||||||| |||||||||||||||| ||  ||||||| ||||||||    
T  37480189 aagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatacca 37480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 42602668 - 42602575
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || ||||||||||  ||||  |||||| ||| |||||||||||||||  ||||||| ||||||||    
T  42602668 aagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaatacca 42602575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 18259811 - 18259751
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| ||||||| |||||||  ||||||||||||||| |||||| |||| ||||||||    
T  18259811 ggagagagttgaacctgagacctataggaggagcacactctcaaatctcaagccaatacca 18259751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 19244189 - 19244129
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaataccag 335  Q
    |||||||| ||||| ||||||| | |||||||||||||| ||  |||||||||||||||||    
T  19244189 gagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccag 19244129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 1729880 - 1729837
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaatacca 1729837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 5147675 - 5147734
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||| ||||||||| ||| ||||||| ||||||| ||| |||||||||||||    
T  5147675 gagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaatacca 5147734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 11251167 - 11251108
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||  |||| ||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  11251167 gagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatacca 11251108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 16951492 - 16951429
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggagg 304  Q
    ||||||||||||||||| ||| |||||| ||| | ||||||| ||||| |||||||||| ||||    
T  16951492 aagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgagacctcgatgagg 16951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 17022157 - 17022094
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggagg 304  Q
    ||||||||||||||||| ||| |||||| ||| | ||||||| ||||| |||||||||| ||||    
T  17022157 aagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgagacctcgatgagg 17022094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 4262296 - 4262354
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||||| ||||| ||||||| ||||||||||||||| |||  ||||||| |||||    
T  4262296 cggagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 32650593 - 32650651
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| ||||||||||||| ||| ||||| ||||||||| ||| ||||||| |||||    
T  32650593 agagaatcgaacccgagaccttgagcaggagtacactcccagatctcaagtcagtacca 32650651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 42860462 - 42860372
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    ||||||||||||||||| |  |||| || || ||  | |||| ||||  |||||||||||||||||||||||||||  || ||||||||||    
T  42860462 aagaagttaaattagcccactcaaactagcaccgacgggaatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaata 42860372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 360712 - 360777
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactc 313  Q
    ||||||| || | |||||||| || || ||||||||||||| ||||| | ||||||||||||||||    
T  360712 taaattaacccacccaaattaacaccgaagagaattgaacctgagacgtagaggaggagcacactc 360777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 29503349 - 29503292
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| |||||||||||||||||||  ||||||  ||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaatacca 29503292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 34041594 - 34041643
Alignment:
Q  285 aacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||| |||||||||||||||| || |||| ||||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaatacca 34041643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 11625 - 11549
Alignment:
Q  258 tatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||| || | |||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  11625 tatccaaattaacaccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaatacca 11549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 19238546 - 19238632
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||   | ||| |||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19238546 taaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaatacca 19238632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 332
Target Start/End: Complemental strand, 51948594 - 51948503
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||||||||||||| | ||  |||||  ||  ||||||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||    
T  51948594 aagaagttaaattagtccatttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatac 51948503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 28635810 - 28635717
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || | |||||||| |||||  ||||||| |||||||||||||||||| ||||||||||| |||||    
T  28635810 aagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtacca 28635717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 49576856 - 49576949
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| |||| | | |||||||  ||| ||||||||| ||||| ||||||| |||||||||||||||||||| ||| ||| ||||||||    
T  49576856 aagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatacca 49576949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 51954228 - 51954139
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||||| |||||||||| | |||||||  || |||||| |||  |||| ||||||||||||||||||| |||||||| ||||||||||||    
T  51954228 aagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaat 51954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 54079119 - 54079167
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactg 76  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  54079119 ttctctcgtgtaattcgtgtggtgcttgtcgcaccatatagcacaactg 54079167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 47044795 - 47044718
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat---accaggccattccaagtgggt 351  Q
    |||||| ||||| ||||||||||||||||||| |||| || |||||||||||||   ||||||||| |||||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggt 47044718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 51969131 - 51969052
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatc 320  Q
    ||||||||||||||| | |||||||||  || | ||||||| |||||| || |||| |||||||||||||||||||||||    
T  51969131 aagaagttaaattagtccatccaaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacactcccaaatc 51969052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 39509148 - 39509091
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||||| || |||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattacca 39509091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 32046664 - 32046716
Alignment:
Q  279 gaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  32046664 gaatcgaacccgagacctcgaagaggagcactctcccaaatcccaagccaata 32046716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 13015507 - 13015448
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||  ||||| |||||||||||||||||||||| ||||||| ||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatacca 13015448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 37109347 - 37109406
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| |||||||||||||||||||  ||||||| ||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatacca 37109406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 38869844 - 38869789
Alignment:
Q  279 gaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacca 38869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 24827896 - 24827846
Alignment:
Q  284 gaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaatacca 24827846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 13496355 - 13496262
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||  ||||||||| | | | || ||||| |||| ||||||||||| ||||| ||||||| ||  ||||||||||||||||    
T  13496355 aagaagctaaattagctcatccaaattgttaccagaaagaatcgaacacgagacctcgaagaggaacacactcacatgtcccaagtcaatacca 13496262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 30938217 - 30938274
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||||||||||||||||||||| | |||||||  ||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatacca 30938274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 51250484 - 51250577
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || ||||| |||| ||||  |||| || |||| |||||||||||||| |||||||| ||||||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaatacca 51250577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 7949416 - 7949508
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc 333  Q
    |||||| |||||||||| | | |||||  || | |||||||| ||||| ||||||| ||||||||||||||||| |  ||||||| |||||||    
T  7949416 aagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 21660155 - 21660199
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  21660155 gagacctcgaggaagagcacactcccagatctcaagtcaatacca 21660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 21668919 - 21668963
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  21668919 gagacctcgaggaagagcacactcccagatctcaagtcaatacca 21668963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 23378036 - 23377980
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||| ||||| ||||||| |||||||||||||||||||  ||||||| |||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 31759669 - 31759713
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||    
T  31759669 gagaccttgaggaggagcacactcccaagtcccaagccaatacca 31759713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 43728472 - 43728416
Alignment:
Q  278 agaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||| ||||| | ||||||||||||||||||| |||  ||||||||||||    
T  43728472 agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaatacca 43728416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 52254399 - 52254459
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||  |||| || ||||| ||||||||||||||| || |||||||||||||||||    
T  52254399 ggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaagtcaatacca 52254459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 4249257 - 4249198
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||  |||| ||||||| ||||||||||||||||| |||||||||| | ||||||    
T  4249257 gagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctatacca 4249198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 8931046 - 8931136
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||||||||| || | |||||||| |||||| |  ||| ||||  |||||||  ||||||||||||||| ||| |||||| ||||||    
T  8931046 aagaagttaaattaaccgacccaaattagcatcgggggaaatcgaacttgagaccttcaggaggagcacactctcaagtcccaaatcaata 8931136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 9936930 - 9937016
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| || | |||||||  || ||| |||||| ||||| || || |||||||||||||||||||||| || |||||| ||||||    
T  9936930 taaattaacccacccaaattgacaacggtgagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgatacca 9937016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 12822082 - 12821992
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||| ||||||| |||| | ||||||  |||||||  ||| ||| | ||||||| ||  ||||||||||||||| ||||||||||||||    
T  12822082 aagaagctaaattaacctacctaaattagaatcggaggaaatcgaatctgagaccttgaacaggagcacactcccagatcccaagtcaata 12821992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 42644873 - 42644963
Alignment:
Q  242 agaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||| |||||||| | | |||||||| ||| ||||| ||| ||||| ||||| | ||||| || ||||||| || |||||||||||||||    
T  42644873 agaagctaaattagtccaaccaaattagcattggagataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 55427169 - 55427255
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  || ||  |||||| ||||| ||||||||||| ||||||| |||||||  ||||||| ||||||||    
T  55427169 taaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaatacca 55427255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 8030166 - 8030259
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  ||   ||| |||| ||||  ||||||| |||||||||||||||||||| ||||||| | ||||||    
T  8030166 aagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctatacca 8030259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 14451747 - 14451796
Alignment:
Q  280 aattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaa 329  Q
    |||||||||  |||||| |||||||||||||||| || ||||||||||||    
T  14451747 aattgaacctaagaccttgaggaggagcacactctcatatcccaagtcaa 14451796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 19680784 - 19680863
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc---aggccattccaagtgggt 351  Q
    |||||||| |||||  |||||| ||||| |||||||||||||| |||||||  ||||||   |||||| |||||||||||    
T  19680784 gagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggt 19680863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 24124067 - 24124108
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  24124067 agacctcaaggaggaccacactcccaaatcccaagccaatac 24124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 37274421 - 37274510
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaat 330  Q
    |||||| |||||||||| |   |||||| || | |||||||| |||||  |||||| |||||||||||||||||||  ||||||| ||||    
T  37274421 aagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 46295211 - 46295138
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||| |||| ||||| | |||||||  || ||| |||||| ||||| ||||||| |||||||||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 56236937 - 56236970
Alignment:
Q  301 gaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||||| |||||||||||||||||    
T  56236937 gaggagcacactcccatatcccaagtcaatacca 56236970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 15285 - 15378
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | | |||||  |||| |||||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||||||    
T  15285 aagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 41602 - 41688
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  |||| |||||||||||||| ||||||||||||||||||| |||| || ||| |||| ||||||||    
T  41602 taaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaatacca 41688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 12587352 - 12587294
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||    
T  12587352 cggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 41703425 - 41703375
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactgtt 78  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  41703425 ttctctcgtgtaattcgtgtggtgcttgtcgcaccatatagcacaactgtt 41703375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 51814601 - 51814515
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||| | |||||||  || |||||||||| ||||| ||||||| |||||||||||||||| || ||| |||||||||||||    
T  51814601 taaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaatacca 51814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 16893508 - 16893415
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| |  ||||||  || |||||| ||| ||||| ||||||||||||||||| ||||||||||||| |||| ||||||||    
T  16893508 aagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaatacca 16893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 41697831 - 41697782
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactgt 77  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  41697831 ttctctcgtgtaattcgtgtggtgcttgtcgcaccatatagcacaactgt 41697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 12259354 - 12259284
Alignment:
Q  261 ccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||  |||||| |||||| ||||  ||||| ||||||||||||||||||||||||||||||| ||||    
T  12259354 ccaaattgacatcggtgagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaata 12259284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 21547442 - 21547535
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||| ||||| | | |||||  |||| |||||||| ||||| || ||||||||||||||||| ||||||  ||||||| ||||||||    
T  21547442 aagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaatacca 21547535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 31794226 - 31794319
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || | ||| |||| |||| | |||||| |||||||||||||||||||| ||||||| ||||||||    
T  31794226 aagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaatacca 31794319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 40257513 - 40257420
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||| ||||| | |||||||  || |||| ||||||||||  |||||||||||||||||||||||||||  || |||| ||||||||    
T  40257513 aagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaatacca 40257420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 52116779 - 52116836
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||| ||||| | |||||||||||||||||||| ||||||| ||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaatacca 52116836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 52336736 - 52336829
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||| ||||||||||| |||||||||  || | |||| ||| ||||| |||| ||  |||||||||||||||||| |||||||| ||||||||    
T  52336736 aagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatacca 52336829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 3266004 - 3265948
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| | |||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 8017273 - 8017225
Alignment:
Q  28 ttctctcgtgcaattcgtgtggtgcttgttgcaccatatagcacaactg 76  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||    
T  8017273 ttctctcgtgcaattcgtgtggtgctcgtcgcaccatattgcacaactg 8017225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 15786317 - 15786373
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 8177178 - 8177237
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| || |||| ||||||||||||||||||| |||||||| ||||||||    
T  8177178 gagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatacca 8177237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 9165191 - 9165250
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| ||||| | |||||||||||||||||||  ||||||| ||||||||    
T  9165191 gagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaatacca 9165250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 28411410 - 28411351
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||| | |||||||| | ||||||||||||| || |||||||||||||||||    
T  28411410 gagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaatacca 28411351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 33700769 - 33700828
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| || ||||| ||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaatacca 33700828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 4280413 - 4280503
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    ||||||||||||||||  | |||||||| || || |||||||  |||| |||||||  ||||| ||||||||| ||| |||||||||||||    
T  4280413 aagaagttaaattagctcacccaaattagcaccgaagagaatcaaacctgagaccttcaggagaagcacactctcaagtcccaagtcaata 4280503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 1094639 - 1094546
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||| | | |||||  || |||||||||| |||   ||||||||| |||||||||||||| ||  | ||||||||||||||    
T  1094639 aagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaatacca 1094546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 6122908 - 6122815
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  ||   ||| |||| ||||| ||||||| |||||||||||||||||||| ||||||| | ||||||    
T  6122908 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatacca 6122815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 8904494 - 8904437
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    |||||||| ||||  ||||||| |||||||||||||||| || |||||||||||||||    
T  8904494 gagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatac 8904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 9643771 - 9643864
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| ||||   |||||  || |||||| ||||||| | ||||||| ||||| || |||||||||| |||||||| ||||||||    
T  9643771 aagaagttaaattaacctacaaaaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaatacca 9643864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 17410345 - 17410252
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||||||| |||||  |||    |||||| ||||  |||| ||||||||||| |||||||||| |||||||  ||||||||    
T  17410345 aagaagttaaattagcctatctaaattggcataaaggagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaatacca 17410252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 21267989 - 21268046
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||||||  ||||| |||||| |||||||||||||||||||| ||||||| ||||||    
T  21267989 gagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatac 21268046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 24047064 - 24047157
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||| | | |||||  ||  || |||||| ||||  || ||||||||||||||||||||||||| || |||| ||||||||    
T  24047064 aagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaatacca 24047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 25494031 - 25494124
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||| ||| ||||| |||   | |||||  |||| ||||||||||||||| |||| ||||| | |||||||| ||||||||    
T  25494031 aagaagttaaattagcccatctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatacca 25494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 2799942 - 2799883
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| ||| |||| | ||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctatacca 2799883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 6948039 - 6948114
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactccca 316  Q
    |||||||||||||| |  ||| |||||  || ||| |||||||||||  |||||||||||||| ||||||||||||    
T  6948039 aagaagttaaattaactcatctaaattgacaccggtgagaattgaacatgagacctcgaggagcagcacactccca 6948114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 331
Target Start/End: Complemental strand, 9964545 - 9964462
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaata 331  Q
    |||||||||| ||| |||||| ||  ||||| |||  |||| ||||| | ||||| ||||||||||||| ||||||||||||||    
T  9964545 taaattagcccatcaaaattagcactggagataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaata 9964462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 10150865 - 10150924
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| ||||| | ||||||||| |||||||||| |||||| | |||||||    
T  10150865 gagagaattgaacctgagactttgaggaggagtacactcccaagtcccaaataaatacca 10150924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 25297836 - 25297793
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||||||||| || |||| ||||||||||||    
T  25297836 agacctcgaggaggagcacactctcagatcctaagtcaatacca 25297793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 26232356 - 26232395
Alignment:
Q  274 ggagagaattgaacccgagacctcgaggaggagcacactc 313  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  26232356 ggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 30203189 - 30203260
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacact 312  Q
    |||||| ||||||||||   | |||||  ||||||||||||||||||| ||||||| ||||||||| |||||    
T  30203189 aagaagctaaattagccagccaaaattggcatcggagagaattgaacctgagaccttgaggaggagaacact 30203260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 7219915 - 7219973
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| ||||| ||||| |||||||||||||||||| ||  ||||| ||||||||||    
T  7219915 agagaatcgaacctgagacttcgaggaggagcacactctcatgtcccaggtcaatacca 7219973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 17439982 - 17439944
Alignment:
Q  290 gagacctcgaggaggagcacactcccaaatcccaagtca 328  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  17439982 gagacctcgaggaggagcacactcccagatcctaagtca 17439944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 31383795 - 31383853
Alignment:
Q  276 agagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||| ||||| |||||| | ||||||||||||||||||  ||||||| ||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatacca 31383853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 9117233 - 9117140
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||    ||||||||  |  ||| ||||| ||||| |||||||| |||||||||||||| ||| |||||||| | ||||||    
T  9117233 aagaagttaaattagcacgcccaaattagtactggaaagaatcgaacctgagacctcaaggaggagcacacttccagatcccaagcccatacca 9117140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 10334104 - 10334145
Alignment:
Q  293 acctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||||||||| |||||||||| | ||||||||||||||    
T  10334104 acctcgaggaggagtacactcccaagttccaagtcaatacca 10334145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 12370245 - 12370185
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||  |||  |||||||||||||||||||||||||||  ||||||| ||||||||    
T  12370245 cggagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaag-caatacca 12370185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 16169976 - 16170033
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| || |||| |||||||| ||||||||||  ||||||||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaatacca 16170033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 19528325 - 19528382
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| ||||||||||||||||  | |||||||| ||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaatacca 19528382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 27223128 - 27223185
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| || || ||||||||||||| |||| ||||||||||||    
T  27223128 gagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 29738312 - 29738239
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||| ||||||| || |||||||||| ||||||||||||| ||||  |||| || ||||| ||| |||||||    
T  29738312 aagaagctaaattaacccatccaaattagcatcggagagaatcgaacttgagatcttgaggatgagtacactcc 29738239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 44046162 - 44046203
Alignment:
Q  293 acctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||||||||||||||| |||||||| ||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaatacca 44046203  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 44126509 - 44126416
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||||| | |||||  ||   ||||||||  || | ||||||||| |||||||||||||||||  ||||| ||||||||||    
T  44126509 aagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaatacca 44126416  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 45266941 - 45266860
Alignment:
Q  248 taaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaa 329  Q
    |||| ||||| |||||||||  || ||| |||||| ||||| ||||||| ||||||||||| ||||| ||  ||||||||||    
T  45266941 taaactagcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaagtcaa 45266860  T

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Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 13028 - 13101
Alignment:
Q  261 ccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||  ||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| |||| ||||||||    
T  13028 ccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaatacca 13101  T

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Target: scaffold0211 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 24167 - 24074
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||| |  ||||||  |||| |||| ||| ||||| || || |||| |||||||||||||| || ||||||||||||||||    
T  24167 aagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaatacca 24074  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 49388 - 49328
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacc 333  Q
    |||||||||| ||||| || ||||||| ||||||||||||| ||||||||||| |||||||    
T  49388 cggagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaagccaatacc 49328  T

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Target: scaffold1367 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 836 - 895
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||||| ||||| ||||| ||||||||||||||| ||||| |||||||| ||||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaatacca 895  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 94967 - 95026
Alignment:
Q  275 gagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||| ||||||||| ||||||| |||||||||||||||||||  | ||||| ||||||||    
T  94967 gagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaatacca 95026  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 157000 - 157042
Alignment:
Q  292 gacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaatacca 157042  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 8654 - 8695
Alignment:
Q  291 agacctcgaggaggagcacactcccaaatcccaagtcaatac 332  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  8654 agacctcaaggaggaccacactcccaaatcccaagccaatac 8695  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 1835 - 1794
Alignment:
Q  273 cggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    ||||||||||||||||| |||||| ||||||||||| |||||    
T  1835 cggagagaattgaaccctagaccttgaggaggagcaaactcc 1794  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 2468 - 2525
Alignment:
Q  277 gagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||| ||  ||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaatacca 2525  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 2673 - 2746
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcc 314  Q
    |||||| ||||||||||| | ||||||  || | |||||||| ||||| ||||||| ||||||||||| |||||    
T  2673 aagaagctaaattagcctcttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 15739 - 15832
Alignment:
Q  241 aagaagttaaattagcctatccaaattatcatcggagagaattgaacccgagacctcgaggaggagcacactcccaaatcccaagtcaatacca 334  Q
    |||||| |||||||||| | |||||||  || ||  ||||||  |||  ||||||| ||||||||||| ||||| |||||||||| ||||||||    
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaatacca 15832  T

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