View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10730_3 (Length: 508)
Name: NF10730_3
Description: NF10730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10730_3 |
 | |
|
| [»] scaffold0036 (1 HSPs) |
| | |
|
| [»] scaffold0214 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 438; Significance: 0; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 32 - 489
Target Start/End: Original strand, 11896948 - 11897405
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11896948 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
11897047 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11897048 |
aagaagggttacgtagcttacaagcttgacttggagaaagcttttgacaacgtcaactaggatttcctaagcaactgcctccatgattttggatttccga |
11897147 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11897148 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
11897247 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgggcaccc |
431 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
11897248 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctactatcaactcagcagtcgtccaaggaagatgggcaccc |
11897347 |
T |
|
| Q |
432 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11897348 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
11897405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 32 - 489
Target Start/End: Complemental strand, 26433045 - 26432588
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| |||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| || || ||| |
|
|
| T |
26433045 |
tattggcccctatcaaagcagtttcctgcctggtaggggtaccgcagataactctattgttttgcaggaaatttttcatttcatgaagagatcgaagagg |
26432946 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| ||||||| |||||||| ||||||||| | ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
26432945 |
aaaaagggtttcgtagctttcaagcttgatctagagaaagcttttgacaacgtcaactgggaatttctaagcaactgcctccatgattttgggtttccag |
26432846 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
||||||||||||| |||||||||||||| || |||| | | ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| || |
|
|
| T |
26432845 |
acatcaccatcaaactcatcatgcattgtgtctcttcatcaaactactctatactttggaatgggaacaagttgccgtctttcaaaccttctcatggtct |
26432746 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgggcaccc |
431 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| |||||||||||||||| || |||||||| ||||| || ||| |||||||||||||| ||| |
|
|
| T |
26432745 |
ccgacaaggtgatccattgtccccttatctcttcatcatttgcatggaaaagctatccgctgctatcaactccgccgtcacccaaggaagatgggaaccg |
26432646 |
T |
|
| Q |
432 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
489 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
26432645 |
attcaaatcactcctacggggccgcatttatcccacctcctttttgcaaatgatgtcc |
26432588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 45 - 388
Target Start/End: Original strand, 23424311 - 23424654
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaagggttacg |
144 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||| | |||||||| ||||||||||||||||||||||| ||||||| | | || || |||||||| ||||| | |
|
|
| T |
23424311 |
caaagcagatttctgcctagtaggggaacttctgataactcaattgttttgcaggaaattattcacttcatgaggaaatcaaagaggaagaaaggttatg |
23424410 |
T |
|
| Q |
145 |
tagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcaccatcaa |
244 |
Q |
| |
|
| |||| |||||| |||||||||||||| ||||| || |||| ||||||||||| | ||||| || || ||||| ||||| ||||||||||||| |
|
|
| T |
23424411 |
ttgctttcaagctagacttggagaaagcattcgataatgtcagatgggatttccttaattcttgccttcaggaatttggttttccagacatcaccatcaa |
23424510 |
T |
|
| Q |
245 |
gctcatcatgcattgcgt-agcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtga |
343 |
Q |
| |
|
||||||||| ||||| || | || |||| | | ||| ||| | ||||| || ||||| |||| ||||||||||| | ||||| ||| |||||||||| |
|
|
| T |
23424511 |
gctcatcatacattgtgtcacctcctcc-acattctcaatattatggaaaggtaacaaaatgccccctttcaagcccacacatggtctcagacaaggtga |
23424609 |
T |
|
| Q |
344 |
tccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
||| | || |||||||||||||| || ||||||||||||||||| |
|
|
| T |
23424610 |
cccgctctctccttatcttttcatactatgcatggaaaagctttc |
23424654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 32 - 385
Target Start/End: Complemental strand, 38647532 - 38647179
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||| || || | ||||| || |||||||||||||||||| | |||||||||| | || |||| |
|
|
| T |
38647532 |
tattggcctctatcaaagcatttttctgcctggtagaggaacatctgataattcaattgttttgcaggaaattgtacatttcatgagaaaatccaaaaat |
38647433 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| |||||||| ||| | | ||| |||||| |||| |||||||| || || ||||||||||| ||||| | ||||| ||||||||||| ||||| |
|
|
| T |
38647432 |
aaaaagggttatgtaacattcaaacttgacctggaaaaagcttttgataatgtcaactgggacttccttaattcttgcctgcatgattttggttttccag |
38647333 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||||||||||||||||||||||||||| || | || | | | |||||| ||||||||||| || || |||| ||||| |||||||| || || || |
|
|
| T |
38647332 |
acatcaccatcaagctcatcatgcattgtgtttcatcatccaccttctctattctttggaacggtaataaaatgcccccttttaagccttcccacggtct |
38647233 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
| |||||||||||||| | || || || || ||||| | |||||||||||||| |
|
|
| T |
38647232 |
cagacaaggtgatccgctctctccctacctcttcattttatgcatggaaaagct |
38647179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 36 - 256
Target Start/End: Complemental strand, 11890085 - 11889865
Alignment:
| Q |
36 |
ggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaaga |
135 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||||||||| || || ||| |||||||||||||||||||| | || || ||| || ||||| | ||||| |
|
|
| T |
11890085 |
ggtccctaccaaagcagcttcctgccaggtaggggcacggctgacaacactattgttttgcaggaaattgtacactttatgtagagatctaagaagaaga |
11889986 |
T |
|
| Q |
136 |
agggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacat |
235 |
Q |
| |
|
| || || ||||||| ||| |||||| | ||||||||||| || || ||||||||||||||| |||| ||||||||||| ||||| || || | || |
|
|
| T |
11889985 |
aaggctatgtagctttcaaacttgacctagagaaagcttttgataatgtcaactgggatttcttaagtgcttgcctccatgactttggtttcccagatat |
11889886 |
T |
|
| Q |
236 |
caccatcaagctcatcatgca |
256 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
11889885 |
taccataaagctcatcatgca |
11889865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 17718708 - 17718481
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||||| ||||| ||||| | | |
|
|
| T |
17718708 |
tattggcccttaccaaagcagctttctgcctggtaggggaacttctgataactccattgttttgcaggaaatcattcattacatgagaagatctaagaag |
17718609 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| || ||||| || |||| |||||| ||| | |||||||| || || || ||||| |||||||| || | | || || || |||||||| || ||| |
|
|
| T |
17718608 |
aaaaaaggttatgtggctttcaagctagaccttgagaaagcctttgataatgtcaattgggattttcttaactcttgtctgcaggattttggtttcccgg |
17718509 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
17718508 |
acgtcaccatcaagctcatcatgcattg |
17718481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 19019937 - 19019710
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||||| ||||| ||||| | | |
|
|
| T |
19019937 |
tattggcccttaccaaagcagctttctgcctggtaggggaacttctgataactccattgttttgcaggaaatcattcattacatgagaagatctaagaag |
19019838 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| || ||||| || |||| |||||| ||| | |||||||| || || || ||||| |||||||| || | | || || || |||||||| || ||| |
|
|
| T |
19019837 |
aaaaaaggttatgtggctttcaagctagaccttgagaaagcctttgataatgtcaattgggattttcttaactcttgtctgcaggattttggtttcccgg |
19019738 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
19019737 |
acgtcaccatcaagctcatcatgcattg |
19019710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 346
Target Start/End: Complemental strand, 53608637 - 53608336
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaagggttacg |
144 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||| ||||| || || | ||| || || || | |
|
|
| T |
53608637 |
caaagcagctttctgcctggtaggggaacttctgataactccattgttttgcaggaaattattcattatatgaaaagatcaaagaagaaaaaaggctatg |
53608538 |
T |
|
| Q |
145 |
tagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcaccatcaa |
244 |
Q |
| |
|
| |||| |||||| || | ||||||||||| || || ||||| |||||||| || | ||||| || |||||||| || || ||||||||||||| |
|
|
| T |
53608537 |
tggctttcaagctcgatcttgagaaagcttttgataatgtcaattgggattttcttaatttttgcctacaggattttggtttcccagacatcaccatcaa |
53608438 |
T |
|
| Q |
245 |
gctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgat |
344 |
Q |
| |
|
||||||||||||||| || | || ||| | |||||| |||||||| || ||||| |||| |||||| |||||| ||||| ||| |||| |||||| |
|
|
| T |
53608437 |
gctcatcatgcattgtgtttcctcctctaccttctctattctttggaatggaaacaaaatgccttctttcaggccttcacatggtctcagacagggtgat |
53608338 |
T |
|
| Q |
345 |
cc |
346 |
Q |
| |
|
|| |
|
|
| T |
53608337 |
cc |
53608336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 49150116 - 49150035
Alignment:
| Q |
36 |
ggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatga |
117 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
49150116 |
ggtccctattagagcagttttctgcctggtaggggcactaatgacaactcaattgttttgcaggaaattgttcatttcatga |
49150035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 15473795 - 15473656
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||||||||| || ||||||||||||| ||| ||| | |||||||| |||||||||||||||||| | ||||| ||||| || |||||| |
|
|
| T |
15473795 |
tattggcccctatcaaagtagttttctgcctggta-gggtacttctgataactcaattgttttgcaggaaattgtacattttatgaaaagatccaaaagg |
15473697 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagc |
172 |
Q |
| |
|
|| |||||||| || |||| || ||||||| |||| ||||| |
|
|
| T |
15473696 |
aaaaagggttatgtggctttcaggcttgacctggaaaaagc |
15473656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 3659964 - 3659894
Alignment:
| Q |
33 |
attggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaat |
103 |
Q |
| |
|
||||| ||||||||||| || ||||| |||||||||||||| | || || || ||||||||||||||||| |
|
|
| T |
3659964 |
attggcccctatcaaagtagttttctacctggtaggggcaccactgacaattcgattgttttgcaggaaat |
3659894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 49149851 - 49149802
Alignment:
| Q |
297 |
aacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatcc |
346 |
Q |
| |
|
||||| ||||||| |||||||||| ||||||| || |||||||||||||| |
|
|
| T |
49149851 |
aacaaattgccgcatttcaagcctactcatggtcttcgacaaggtgatcc |
49149802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 55025149 - 55025080
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaa |
101 |
Q |
| |
|
|||||| ||||||||||| || ||||| |||||||||||||| | || || || ||||||||||||||| |
|
|
| T |
55025149 |
tattggcccctatcaaagtagttttctacctggtaggggcaccactgacaattcaattgttttgcaggaa |
55025080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 434; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 32 - 489
Target Start/End: Complemental strand, 23132932 - 23132475
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23132932 |
tattggtccctatcaaagcagctttctgcttggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
23132833 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23132832 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
23132733 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23132732 |
acatcaccatcaagttcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
23132633 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgggcaccc |
431 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
23132632 |
ccgacaaggtgatacgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatcaactcagcagtcgcccaaggaagatgggcaccc |
23132533 |
T |
|
| Q |
432 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
489 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23132532 |
atccaaatcacccctacggggccccatttatcccatctcctatttgcagatgatgtcc |
23132475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 388
Target Start/End: Original strand, 26587024 - 26587380
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||||||||| |||| ||| |||||||| |||||||||||| || |||||| ||||||||||||||||| ||| || |||| | | ||||| ||| |
|
|
| T |
26587024 |
tattggtccctaccaaatcagttttctgccaggtaggggcacttatgacaactcttttgttttgcaggaaattgctcactttatgaggaaatctaagagg |
26587123 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||| || || || |||| ||||||||| | |||||||| || ||||| || |||||||| || || | | || || |||||||| |||||||| |
|
|
| T |
26587124 |
aagaaaggctatgttgctttcaagcttgatcttgagaaagcatttgacaatgttaactgggagtttcttaatacttgtcttcatgatttcggatttcctg |
26587223 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|| | ||||||| ||||||||||||||||| |||| ||| | | | || ||||| || || ||||| ||||| || ||||||||| |||||||||| |
|
|
| T |
26587224 |
acgccgccatcaaactcatcatgcattgcgtcacttcatctaccttcaccatcctttgaaatggtaacaaattgccccccttcaagcctactcatggcct |
26587323 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
|||||||||||| || ||||| || || || ||||| ||||| ||||| || ||||| |
|
|
| T |
26587324 |
ccgacaaggtgacccattgtctccctacctcttcattctttgtatggagaaactttc |
26587380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 14759722 - 14759889
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||| | || |||| | |
|
|
| T |
14759722 |
tattggcccctaccaaagcagttttctgcctgggaggggcacttctgataactccattgttttgcaggaaataattcatttcatgaggagatccaaaaag |
14759821 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcct |
199 |
Q |
| |
|
|||||||| | ||||||| ||| ||||| |||| |||||||| ||||| || |||||||| ||||| |
|
|
| T |
14759822 |
aagaaggggtttgtagctttcaaaattgacctggaaaaagcttttgacaaagtaaactgggaattcct |
14759889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 26973253 - 26973420
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| |||||||| | |||||||| ||||||||||||||||| ||||||||||||| | || |||| | |
|
|
| T |
26973253 |
tattggcccctaccaaagcagttttctgcctgggaggggcacctctgataactccattgttttgcaggaaataattcatttcatgaggagatccaaaaag |
26973352 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcct |
199 |
Q |
| |
|
|||||||| | ||||||| ||| |||||| |||| |||||||| ||||| || |||||||| ||||| |
|
|
| T |
26973353 |
aagaaggggtttgtagctttcaaacttgacctggaaaaagcttttgacaaagtaaactgggaattcct |
26973420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 38348267 - 38348339
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaatt |
104 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||| ||| | ||||| |||||| |||||||||||||| |
|
|
| T |
38348267 |
tattggcccctatcaaagcagcttcctgcctggtaggggaacttctgataattctattattttgcaggaaatt |
38348339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 484
Target Start/End: Original strand, 14760016 - 14760174
Alignment:
| Q |
326 |
tggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgg |
425 |
Q |
| |
|
|||||| || ||||| |||||||||||||| || || ||||| ||||| ||||||||||| || |||||| || ||||| ||| |||||||| ||| |
|
|
| T |
14760016 |
tggccttcgccaaggagatccgttgtccccatacctcttcattctttgtatggaaaagctctctattgctataaattcagcggtcaatcaaggaagttgg |
14760115 |
T |
|
| Q |
426 |
gcacccatccaaatcacccctacggggccgcatttatcccatctcctatttgcagatga |
484 |
Q |
| |
|
| ||| | |||||||| ||||||||| || |||| || || |||||||||||||| |
|
|
| T |
14760116 |
gaaccggttcaaatcacaaatacggggccccagatatctcacctactatttgcagatga |
14760174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 422; Significance: 0; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 32 - 489
Target Start/End: Original strand, 20284649 - 20285106
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
20284649 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaaacactctaaaagg |
20284748 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20284749 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggattttctaagcaactgcctccatgattttggatttccga |
20284848 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
20284849 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaaagggttgccgcctttcgagccttctcatggcct |
20284948 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgggcaccc |
431 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
20284949 |
gcgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatcaactcagcagtcgcccaaggaagatgggcaccc |
20285048 |
T |
|
| Q |
432 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20285049 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
20285106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 32 - 397
Target Start/End: Complemental strand, 50236915 - 50236550
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatga-agcactctaaaag |
130 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||| |||||||||||| | | || ||||| |
|
|
| T |
50236915 |
tattggtccctatcaaagcatttttctgcctggtaggggtacatctgataactcgattgttttgcaggaaattgttcatttcatgagaagattc-aaaag |
50236817 |
T |
|
| Q |
131 |
gaagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccg |
230 |
Q |
| |
|
|||||||| || ||||||| |||||||| ||||| || ||||| || || || || | ||| ||||| | || ||||||||||||||||||||| |
|
|
| T |
50236816 |
aaagaagggctatgtagcttttaagcttgatttggaaaaggcttttgataatgttaattaggacttcctcaattcttgtctccatgattttggatttccg |
50236717 |
T |
|
| Q |
231 |
aacatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcc |
330 |
Q |
| |
|
||||||||| ||| |||||||||||||| || | || || | |||||||| | ||||||||||||||| |||| |||||||||||| ||||||||| |
|
|
| T |
50236716 |
gacatcaccaccaaactcatcatgcattgtgtctcctcacccacctactctatcttatggaacgggaacaagatgccccctttcaagcctactcatggcc |
50236617 |
T |
|
| Q |
331 |
tccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctat |
397 |
Q |
| |
|
|| || ||||||||||| | |||||||| ||||||||| | || ||||| || || |||| |||||| |
|
|
| T |
50236616 |
tcagataaggtgatccgctttccccttaccttttcatcttgtgtatggagaaactatcagttgctat |
50236550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 385
Target Start/End: Original strand, 50451695 - 50452048
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |||| | | ||||| | | |
|
|
| T |
50451695 |
tattggcccttaccaaagcagctttctgcctagtaggggaacttctgataactctattgttttgcaggaaattattcattttatgaggaagtctaagaag |
50451794 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| || ||||| || |||| |||||| || ||||| ||||| || || || ||||| |||||||| || | ||||| ||||| ||||| |||||| |
|
|
| T |
50451795 |
aaaaaaggttatgttgctttcaagctcgatttggaaaaagcatttgataatgtcaaatgggattttcttaattcttgccttcatgagtttggttttccgg |
50451894 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgt-agcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcc |
330 |
Q |
| |
|
||||||||||||| || ||||||||||| || | || |||| | || |||||| | ||||| || ||||| |||||| |||||| ||| | ||||||| |
|
|
| T |
50451895 |
acatcaccatcaaacttatcatgcattgtgtcacctcctcc-actttctctatcttatggaatggtaacaaaatgccgcatttcaaacctacacatggcc |
50451993 |
T |
|
| Q |
331 |
tccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
||||||||||||||||| | || ||||| || ||||| ||||| ||||| ||||| |
|
|
| T |
50451994 |
tccgacaaggtgatccgctttctccttacctcttcattctttgtatggagaagct |
50452048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 32 - 255
Target Start/End: Complemental strand, 31325302 - 31325079
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||| | |||||| ||||||||||||||||| ||| | |||||||| |||||||||||||||||| | || ||||||| || || | | |
|
|
| T |
31325302 |
tattggcccctaccgaagcagttttctgcctggtaggggaacttctgataactcaattgttttgcaggaaattgtccacttcatgagaagatccaagaag |
31325203 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||||||||||||||||| ||| |||||| ||||||||||||| || || ||||| ||||||||||| | |||||||||||||| || ||||| |
|
|
| T |
31325202 |
aagaagggttacgtagctttcaaacttgacctggagaaagcttttgataatgtcaattgggatttccttaattcttgcctccatgatttcggttttccag |
31325103 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgc |
255 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
31325102 |
acatcacaatcaagctcatcatgc |
31325079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 385
Target Start/End: Complemental strand, 10104022 - 10103677
Alignment:
| Q |
40 |
cctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaaggg |
139 |
Q |
| |
|
|||||||||| |||||||||||||||||||| || || |||||||| ||||||||||||||||||||| ||||||| | | | ||||| | ||||||||| |
|
|
| T |
10104022 |
cctatcaaagtagctttctgcctggtaggggaacggctgataactcaattgttttgcaggaaattatttatttcataaggaaatctaagaagaagaaggg |
10103923 |
T |
|
| Q |
140 |
ttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcacc |
239 |
Q |
| |
|
|| || |||| |||||| || || |||||| || | ||||| |||| ||||| ||||| | ||||| || || ||||||||| | | |||||| |
|
|
| T |
10103922 |
ctatgttgctttcaagctcgatttagagaaaactattgacaatgtcagatgggacttccttaattcttgccttcaagagtttggattttcagatatcacc |
10103823 |
T |
|
| Q |
240 |
atcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaag |
339 |
Q |
| |
|
||||| || |||||||||||||| ||| | | || |||||| | |||||||| ||||| |||| ||||||||| | |||| ||| |||||| |
|
|
| T |
10103822 |
atcaaacttatcatgcattgcgtcactttatcaactttctctattttatggaacggtaacaaaatgccctagttcaagcctacatatggtctcagacaag |
10103723 |
T |
|
| Q |
340 |
gtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
||| |||| | || ||||| || ||||||||||||||||| ||||| |
|
|
| T |
10103722 |
gtgttccgctctctccttacctattcatcctttgcatggagaagct |
10103677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 259
Target Start/End: Original strand, 43298158 - 43298385
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||| ||||||||| ||||||| ||| | |||||||| ||||||||||||||||| ||||||| |||| ||||||| | |
|
|
| T |
43298158 |
tattggcccttaccaaagcagttttctgcctagtaggggaacttctgataactcaattgttttgcaggaaatagttcattttatgagaagatctaaaaag |
43298257 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||| || ||||| | ||| |||||| || |||||||||| | || ||||| |||||||| |||| |||||| |||||||||||| ||| |
|
|
| T |
43298258 |
aagaagggatatgtagccttcaaacttgacctgaagaaagcttttaataatgtcaaatgggattttctaaattcttgcctcattgattttggattctcga |
43298357 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |
|
|
| T |
43298358 |
acatcaccatgaagcttatcatgcattg |
43298385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 1524767 - 1524852
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatga |
117 |
Q |
| |
|
|||||| ||||||||||| || ||||||||||||||||| ||| | ||||| ||||||||||||||||||||| | || ||||||| |
|
|
| T |
1524767 |
tattggcccctatcaaagtagttttctgcctggtaggggaacttctgataattctattgttttgcaggaaattgtccacttcatga |
1524852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 23465137 - 23465224
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactc-tattgttttgcaggaaattattcatttcatgaa |
118 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||| | || ||||| | || ||||| |||||||| ||||||||||||| |
|
|
| T |
23465137 |
tattggtccctatcagagcagttttctgcctggtaggggcactactgacaactcatttttttttggaggaaattgttcatttcatgaa |
23465224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 5193271 - 5193219
Alignment:
| Q |
207 |
tgcctccatgattttggatttccgaacatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
5193271 |
tgcctccttgattttggatttacgaacatcaccatcaagcttatcatgcattg |
5193219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 23465403 - 23465461
Alignment:
| Q |
288 |
tggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatcc |
346 |
Q |
| |
|
||||| || ||||| ||||||| |||||||||| ||||||| || |||||||||||||| |
|
|
| T |
23465403 |
tggaatggtaacaaattgccgcatttcaagcctactcatggtcttcgacaaggtgatcc |
23465461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 1524957 - 1525078
Alignment:
| Q |
222 |
ggatttccgaacatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagcctt |
321 |
Q |
| |
|
||||| ||| | ||||||||||| |||||||||||||| || | |||||| | |||||| |||||||| || ||||| || || ||||||||||||| |
|
|
| T |
1524957 |
ggattcccggatatcaccatcaaactcatcatgcattgtgttacctctcctgccttctctattctttggaatggtaacaaattacctcctttcaagcctt |
1525056 |
T |
|
| Q |
322 |
ctcatggcctccgacaaggtga |
343 |
Q |
| |
|
| || || || || |||||||| |
|
|
| T |
1525057 |
cccacggtcttcggcaaggtga |
1525078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 374; Significance: 0; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 32 - 489
Target Start/End: Complemental strand, 14654027 - 14653570
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
14654027 |
tattggtccctatcaaagcagttttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcgatctaagagg |
14653928 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
14653927 |
aagaagggatacgtagctttcaagcttgatttggagaaagcattcgacaacgtcaactgggaattcctaaacaactgcctccatgattttggatttccta |
14653828 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14653827 |
acatcaccatcaagctcatcatgcattgcgtagcttctccgagttactctatactttggaatgggaacaagttgccgcctttcaagccttctcatggcct |
14653728 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctatgaactcagcagtcggccaaggaagatgggcaccc |
431 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||||| | ||||||||||||||||||| |
|
|
| T |
14653727 |
ccaacaaggtgatccgttgtccccttattttttcatcctttgcatggaaaagctatccgctgctataaactcagcagttgcccaaggaagatgggcaccc |
14653628 |
T |
|
| Q |
432 |
atccaaatcacccctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
489 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14653627 |
atccaaatcactcctacggggccgcatttatcccatctcctatttgcagatgatgtcc |
14653570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 382
Target Start/End: Complemental strand, 35135569 - 35135219
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||| ||||||| |||||||| ||| ||||||||||||| || |||| ||||| ||||||||||||||||| || || || ||||||| |||||||||| |
|
|
| T |
35135569 |
tattagtccctaccaaagcagttttttgcctggtaggggtacctcagacaactccattgttttgcaggaaataatccactttatgaagcgctctaaaagg |
35135470 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| ||||| ||| |||||||| ||||| || || || |
|
|
| T |
35135469 |
aagaagggttttgtagctttcaagcttgatttagagaaagcttttgacaacgtcaactgggacttccttcgcatttgcctccaggatttcggcttcccag |
35135370 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||| |||||||| |||||||||||||| || | || || || ||||| || | ||||| || |||||| | | |||||||||||| ||||||| || |
|
|
| T |
35135369 |
acattaccatcaaactcatcatgcattgtgttacctcaccaagctactcaattttatggaatggaaacaagctctctcctttcaagcctactcatggact |
35135270 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaa |
382 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
35135269 |
tcgtcaaggtgacccgttgtctccttatcttttcatcctatgtatggaaaa |
35135219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 32 - 382
Target Start/End: Original strand, 40327975 - 40328325
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||||||||| ||||| || ||| | ||||||||||| || |||| ||||| ||||||||||||||||| || || || ||||||| |||||||||| |
|
|
| T |
40327975 |
tattggtccctaccaaagtagtttttttcctggtaggggtacctcagacaactccattgttttgcaggaaataatccactttatgaagcgctctaaaagg |
40328074 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| ||||| ||| |||||||| ||||| || || || |
|
|
| T |
40328075 |
aagaagggttttgtagctttcaagcttgatttagagaaagcttttgacaacgtcaactgggaattccttcgcatttgcctccaggatttcggcttcccag |
40328174 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||| |||||||| |||||||||||||| || | || || || ||||| || | ||||| || |||||| | | |||||||||||| ||||||| || |
|
|
| T |
40328175 |
acattaccatcaaactcatcatgcattgtgttacctcaccgagctactcaattttatggaatggaaacaagctttctcctttcaagcctactcatggact |
40328274 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaa |
382 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
40328275 |
tcgtcaaggtgacccgttgtctccttatcttttcatcctatgtatggaaaa |
40328325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 370
Target Start/End: Original strand, 19265213 - 19265551
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||||||||||| || ||| ||||| ||||||||||||||||| || || || ||||||| |||||||||| |
|
|
| T |
19265213 |
tattggtccctaccaaagcaattttttgcctggtaggggtacccaagacaactccattgttttgcaggaaataatccactttatgaagcgctctaaaagg |
19265312 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||||| || |||| ||||||||| || ||||||||||| ||||||||||||| ||| ||||| ||| |||||||| ||||| || || || | |
|
|
| T |
19265313 |
aagaagggttttgtggctttcaagcttgatttagagaaagcttttgacaacgtcaacttggacttccttcgcatttgcctccaggatttcggcttcccaa |
19265412 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||| |||||||| |||||||||||||| || | || || || ||||| | | ||||| || |||||| | | |||||||||||| ||||||| || |
|
|
| T |
19265413 |
acattaccatcaaactcatcatgcattgtgttacctcaccaagctactccttgttatggaatggaaacaagctctctcctttcaagcctactcatggact |
19265512 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcct |
370 |
Q |
| |
|
|| |||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
19265513 |
tcgtcaaggtgacccgctgtctccttatcttttcatcct |
19265551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 45 - 385
Target Start/End: Original strand, 573002 - 573342
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaagggttacg |
144 |
Q |
| |
|
|||||||| ||||||| |||||||| ||| | |||||||| |||||||||||||||||| |||||||||||| | || |||| ||||||||| || | |
|
|
| T |
573002 |
caaagcagttttctgcatggtagggaaacttctgataactcaattgttttgcaggaaattgttcatttcatgagaaaatcaaaaaagaagaaggggtatg |
573101 |
T |
|
| Q |
145 |
tagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcaccatcaa |
244 |
Q |
| |
|
| |||| |||||| |||||||| |||||||| | || |||| ||||||||||| | |||||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
573102 |
ttgctttcaagctcgacttggaaaaagcttttggtaatgtcagatgggatttccttaattcctgccttcatgagtttggatttccagacatcaccatcaa |
573201 |
T |
|
| Q |
245 |
gctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgat |
344 |
Q |
| |
|
|| |||||||||| || | || || | | |||||| | ||||| || ||||| ||| ||||| || ||||| ||||||||| ||||||||||| |
|
|
| T |
573202 |
acttatcatgcattatgtcacatcaccaacgttctctattttatggaatggtaacaaaatgcatccttttaaaccttcccatggcctcagacaaggtgat |
573301 |
T |
|
| Q |
345 |
ccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
||| | || ||||| || ||||||||||||||||| ||||| |
|
|
| T |
573302 |
ccgctctctccttacctattcatcctttgcatggagaagct |
573342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 397
Target Start/End: Original strand, 16322246 - 16322611
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||||||||| ||||| || ||||| ||| |||||||||||||| | ||||| ||||| | || |||||| |
|
|
| T |
16322246 |
tattggcccctatcaaagtagctttctacctggtaggggtactgctgacaactcaattattttgcaggaaattttacattttatgaaacgatccaaaagg |
16322345 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| ||||| ||||| |||| |||||||||| |||| ||||| || || || || || ||||||||||| | | || |||| |||||| || |||||| |
|
|
| T |
16322346 |
aaaaagggctacgtggctttcaagcttgacctggaaaaagcgtttgataatgttaattgggatttcctcaactcttgtctccttgatttcggttttccgg |
16322445 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
| || | | || || ||||||||||| || | || | | ||| ||| | || ||||| || |||||| |||| ||||||||||| |||||||||| |
|
|
| T |
16322446 |
atattatagttaaacttatcatgcattgtgtctcctcagccaattattctctcctatggaatggaaacaagatgcctcctttcaagcccactcatggcct |
16322545 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagctgctat |
397 |
Q |
| |
|
||||||||||| ||| | || || || |||||||| |||||||||||||| ||||| | |||||| |
|
|
| T |
16322546 |
tcgacaaggtgacccgctttctccgtaccttttcatactttgcatggaaaaactttctgttgctat |
16322611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 385
Target Start/End: Original strand, 177296 - 177649
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||||||||| |||||||| || |||| |||||||||||| | || |||||||||||||||||||||||| ||||||| ||| | || |||||| |
|
|
| T |
177296 |
tattggtccctaccaaagcagtttcctgcaaggtaggggcacttctgacaactctattgttttgcaggaaattgttcattttatgcggagatcaaaaagg |
177395 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| || |||||||| |||| ||| ||||| | ||||||||||| ||||| || || ||||| || || || || ||||| |||||||| || ||| |
|
|
| T |
177396 |
aaaaaaggttacgttgctttcaaacttgatcttgagaaagcttttgacaatgtgaattgggagtttcttagatcgtgtctccaagattttggtttcccgg |
177495 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
| || ||||| |||||||||||||| || ||||| | | | |||| | |||||||| || ||||| | ||| ||| |||||||| ||||||| || |
|
|
| T |
177496 |
atgatacaatcaaactcatcatgcattgtgtcacttcttcaacattctctgttctttggaatggaaacaaatggcctcctatcaagcctactcatggtct |
177595 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
|||||||||| || ||||| ||||| || |||||| | |||||||||||||| |
|
|
| T |
177596 |
aagacaaggtgaccctttgtctccttacctattcatcatctgcatggaaaagct |
177649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 385
Target Start/End: Original strand, 26791301 - 26791471
Alignment:
| Q |
215 |
tgattttggatttccgaacatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttc |
314 |
Q |
| |
|
||||||||| || ||| | | ||||||||||||||||||||||||||| |||| | || | |||||| |||||||| || || | |||||| |||||| |
|
|
| T |
26791301 |
tgattttggcttcccggataccaccatcaagctcatcatgcattgcgttacttcatccagcttctctattctttggaatggaaataggttgcctcctttc |
26791400 |
T |
|
| Q |
315 |
aagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
||||| ||||||||||| | || ||||||||| | ||||| || ||||| || ||||||||||| ||||| |
|
|
| T |
26791401 |
gagcctactcatggcctcaggcagggtgatccgctttccccgtacctttttattctttgcatggagaagct |
26791471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 42403567 - 42403400
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| |||| ||||| || ||||| ||||||||||| ||| | ||||| || |||||||||||||||||||| ||||| ||||| || |||||| |
|
|
| T |
42403567 |
tattggcccctgccaaagtagttttctacctggtaggggtacttctgataattcaattgttttgcaggaaattatacattttatgaaaagatccaaaagg |
42403468 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcct |
199 |
Q |
| |
|
|| |||||||| || || | |||||||||| |||| ||||| || || || ||||||||||| ||||| |
|
|
| T |
42403467 |
aaaaagggttatgtggccttcaagcttgacctggaaaaagcgtttgataatgtcaactgggaattcct |
42403400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 3779121 - 3779048
Alignment:
| Q |
309 |
cctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaa |
382 |
Q |
| |
|
|||||||||||| ||||||| || || |||||||| ||| |||| ||||||||||||||||| || |||||||| |
|
|
| T |
3779121 |
cctttcaagcctactcatggacttcgtcaaggtgacccgctgtctccttatcttttcatcctctgtatggaaaa |
3779048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 42403295 - 42403209
Alignment:
| Q |
304 |
tgccgcctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcag |
390 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| |||||||| || | || |||||||| || || || ||||||||||||||||||| |
|
|
| T |
42403295 |
tgcctcctttcaagcccactcatggcctccggcaaggtgaccctctctcaccttatctatttatactgtgcatggaaaagctttcag |
42403209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 35063007 - 35062956
Alignment:
| Q |
334 |
gacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
35063007 |
gacaaggtgatccactatccccctatcttttcatcctttgtatggaaaagct |
35062956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 39012328 - 39012398
Alignment:
| Q |
33 |
attggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaat |
103 |
Q |
| |
|
||||| ||||||||||| || ||||| |||||||||||||| | || || || ||||||||||||||||| |
|
|
| T |
39012328 |
attggcccctatcaaagtagttttctacctggtaggggcaccactgacaattcgattgttttgcaggaaat |
39012398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 130; Significance: 4e-67; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 32 - 385
Target Start/End: Original strand, 7816932 - 7817285
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
7816932 |
tattggcccttaccaaagcagttttctgcctggtaggggtacttcagataactctattgttttgcaggaaattttgcatttcatgaagcggtctaaaagg |
7817031 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||| | ||||| | ||| |||||| |||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||| || || |
|
|
| T |
7817032 |
aagaaggggtttgtagcattcaaacttgacctggaaaaagctttcgacaacgtcaattgggatttccttagttcgtgcctccatgattttggtttccctg |
7817131 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| | || | | |||||||| | ||||| |||||||| | || ||||||||||| ||||||| || |
|
|
| T |
7817132 |
acatcacaatcaagctcatcatgcattgtgtatcatcctccaactactctattttatggaatgggaacaaacttccttctttcaagcctactcatggtct |
7817231 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
| |||| ||||| || || || ||||| |||||||| ||||||||||||||||| |
|
|
| T |
7817232 |
cagacagggtgaccctttatctccttaccttttcattctttgcatggaaaagct |
7817285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 32 - 390
Target Start/End: Complemental strand, 6641366 - 6641008
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||||||||| || ||||| ||| ||||||||||| |||||||| ||| |||||||||||||| | ||||| ||||| || ||||| |
|
|
| T |
6641366 |
tattggcccctatcaaagtagttttctacctcgtaggggcacttatgataactcaattattttgcaggaaattgtccattttatgaaaagatccaaaaga |
6641267 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|| ||||| || ||||||| |||||||||| |||| |||||||| || || || || ||| | ||||| | | || |||||||| ||||| |||||| |
|
|
| T |
6641266 |
aaaaagggctatgtagctttcaagcttgacctggaaaaagcttttgataatgttaattggaagttcctcaactcttgtctccatgactttggttttccgg |
6641167 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
| ||||| |||||||| |||||| |||| || | || | | ||||||| | | |||||||| ||||| || | ||||||||||| |||||||||| |
|
|
| T |
6641166 |
atatcacaatcaagcttatcatgtattgtgtctcctcagccacttactctctcttatggaacggaaacaaaatgtcccctttcaagcccactcatggcct |
6641067 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcag |
390 |
Q |
| |
|
|||| ||||||||||| | || || || || ||||| | ||||||||||| ||||||| |
|
|
| T |
6641066 |
ccgaaaaggtgatccgctctctccctacctcttcattatgtgcatggaaaaactttcag |
6641008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 279 - 385
Target Start/End: Complemental strand, 32874563 - 32874457
Alignment:
| Q |
279 |
tctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatgg |
378 |
Q |
| |
|
||||| ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||| || ||| | || || ||| | |||||| ||||||||| |
|
|
| T |
32874563 |
tctatcctttgaaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg |
32874464 |
T |
|
| Q |
379 |
aaaagct |
385 |
Q |
| |
|
||||||| |
|
|
| T |
32874463 |
aaaagct |
32874457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 23944828 - 23944900
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatga |
117 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
23944828 |
caaagcagctttctgcctggtaggggaacttctgataattccattgttttgcaggaaattattcattacatga |
23944900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 23620971 - 23620887
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatg |
116 |
Q |
| |
|
|||||||||||| |||||| | ||||||| ||||| |||||| || |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
23620971 |
tattggtccctaccaaagcggttttctgcaaggtagaggcacttttgacaactctattgttttgcaggaaattgtccatttcatg |
23620887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 116; Significance: 9e-59; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 32 - 382
Target Start/End: Complemental strand, 54477758 - 54477407
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgtttt-gcaggaaattattcatttcatgaagcactctaaaag |
130 |
Q |
| |
|
|||||| |||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||| | | || ||||| |
|
|
| T |
54477758 |
tattggcccctgccaaagcagttttctgcctggaaggggcacttcagataactctattgtttttgcaggaaataattcatttcataaggagatccaaaag |
54477659 |
T |
|
| Q |
131 |
gaagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccg |
230 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||| | |||||||| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | || || |
|
|
| T |
54477658 |
taagaagggttatgtagcttttaagcttgatttgaaaaaagcttttgacaatgtcaattgggaattccttagcaactgccttcatgatttcgagttccct |
54477559 |
T |
|
| Q |
231 |
aacatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcc |
330 |
Q |
| |
|
|||||||||||||||||||||||||||| || | || | | |||| ||| |||||||| || |||||| | || ||||||||||| | ||||| | |
|
|
| T |
54477558 |
gacatcaccatcaagctcatcatgcattgtgtttcatcatcaaaatactttatcctttggaatggaaacaagcttccatctttcaagcctacacatggtc |
54477459 |
T |
|
| Q |
331 |
tccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaa |
382 |
Q |
| |
|
| || ||||||||||| |||||||||||||| ||||| |||||||||||||| |
|
|
| T |
54477458 |
tgcgccaaggtgatcctttgtccccttatctcttcattctttgcatggaaaa |
54477407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 32 - 385
Target Start/End: Original strand, 3881512 - 3881868
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||| | ||||| | | |
|
|
| T |
3881512 |
tattggcccttaccaaagcagttttctgcctggtaggggaacttctgataactctattgttttgcaggaaattattcattttatgaagaagtctaagaag |
3881611 |
T |
|
| Q |
132 |
aagaag---ggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttc |
228 |
Q |
| |
|
|||||| ||||| || |||| |||||| || ||||| ||||| || || || ||||| |||||||| || | ||||| ||||| |||| |||| |
|
|
| T |
3881612 |
aagaagaaaggttatgttgctttcaagctcgatttggaaaaagcatttgataatgtcaaatgggattttcttaattcttgccttcatgagtttgattttc |
3881711 |
T |
|
| Q |
229 |
cgaacatcaccatcaagctcatcatgcattgcgt-agcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatg |
327 |
Q |
| |
|
|| |||||||||||| || ||||||||||| || | || |||| | | |||||| | ||||| || ||||| |||||| |||||| ||| | |||| |
|
|
| T |
3881712 |
cggccatcaccatcaaacttatcatgcattgtgtcacctcctcc-accttctctatcttatggaatggtaacaaaatgccgcatttcaaacctacacatg |
3881810 |
T |
|
| Q |
328 |
gcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
|||||||||||||||||||| | || | ||| || ||||| ||||| ||||||||||| |
|
|
| T |
3881811 |
gcctccgacaaggtgatccgctttctctttacctcttcattctttgtatggaaaagct |
3881868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 33803788 - 33803860
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatga |
117 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
33803788 |
caaagcagctttctgcctggtaggggaacttctgataattccattgttttgcaggaaattattcattacatga |
33803860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 48847971 - 48848055
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatg |
116 |
Q |
| |
|
|||||||| |||||||||||| |||||| |||||||||||||| | || ||| | ||||||||||||||||| | ||| |||||| |
|
|
| T |
48847971 |
tattggtctctatcaaagcagttttctgtctggtaggggcactactgacaacacaattgttttgcaggaaatcactcacttcatg |
48848055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 388
Target Start/End: Complemental strand, 46784826 - 46784469
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaag- |
130 |
Q |
| |
|
|||||||||||| ||||| || ||||| || |||| |||||| | || |||||||||||||||||||||||| |||| |||||| | || || | |
|
|
| T |
46784826 |
tattggtccctaccaaagtagttttctaccaggtaagggcacctctgacaactctattgttttgcaggaaattgttcacttcatgtggagatccaagcga |
46784727 |
T |
|
| Q |
131 |
gaagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccg |
230 |
Q |
| |
|
|| || || | ||| |||| ||| |||||| | || ||||||||||| || || || ||||| ||||| | || || ||||||||||| ||||| |
|
|
| T |
46784726 |
aaaaaaaggcttcgtcgctttcaaacttgaccttgaaaaagctttcgataatgtaaattgggagttccttaattcttgtcttcatgattttgggtttcct |
46784627 |
T |
|
| Q |
231 |
aacatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcc |
330 |
Q |
| |
|
| | |||||||||||||||||||||||| || | || | | || ||| | |||||||| || || || |||||||||||||| ||| ||||||||| |
|
|
| T |
46784626 |
agcgccaccatcaagctcatcatgcattgtgttacgtcatcaactttctccgtcctttggaatggaaataaattgccgcctttcaaacctactcatggcc |
46784527 |
T |
|
| Q |
331 |
tccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
| ||||||||||||| | || || || || ||||||||||||||| |||| ||||| |
|
|
| T |
46784526 |
ttagacaaggtgatcctctatctccctacctcttcatcctttgcatgaaaaaactttc |
46784469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 32 - 385
Target Start/End: Original strand, 75707 - 76057
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| ||||||||||| || | | ||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||| || |||||| |
|
|
| T |
75707 |
tattggcccctatcaaagtagttgtttgcctggtaggggcacttcagataactttattgttttgcaggaaataattcacttcatgaagcgttccaaaagg |
75806 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||||| | ||||||| ||| ||||| || |||| |||| ||||||||||||| |||||| || |||| ||||||||||||||| || || | |
|
|
| T |
75807 |
aagaaggactttgtagctttcaaacttgatatg--gaaatcttttgacaacgtcaacttggattttcttagcatctgcctccatgatttcggcttcctag |
75904 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
||||||| ||||||||||| ||||||| | |||| |||| ||||| || | ||||| |||||||| |||| | ||||||||| ||||||| || |
|
|
| T |
75905 |
acatcactatcaagctcattttgcattgtatttcttcatctagctactcaattttatggaa-tggaacaagctgccttccttcaagcctactcatggtct |
76003 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
76004 |
cagacaaggtgaccagttgtccccttatcttttcatcctttgcatggaaaagct |
76057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 45 - 388
Target Start/End: Complemental strand, 24894176 - 24893833
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaagggttacg |
144 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||| ||||||| | | || || |||||||| ||||| | |
|
|
| T |
24894176 |
caaagcagctttctgcctggtaggggaacttctgataactcaattgttttgcaggaaattattcacttcatgaggaaatcaaagaggaagaaaggttatg |
24894077 |
T |
|
| Q |
145 |
tagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcaccatcaa |
244 |
Q |
| |
|
| |||| |||||| |||||||||||||||||||| || |||| ||||||||||| | ||||| || || ||||| ||||| ||||||||||||| |
|
|
| T |
24894076 |
ttgctttcaagctagacttggagaaagctttcgataatgtcagatgggatttccttaattcttgccttcaggaatttggttttccagacatcaccatcaa |
24893977 |
T |
|
| Q |
245 |
gctcatcatgcattgcgt-agcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtga |
343 |
Q |
| |
|
||||||||||||||| || | || |||| | | ||| ||| | ||||| || ||||| |||| ||||||||||| | ||||| ||| |||||||||| |
|
|
| T |
24893976 |
gctcatcatgcattgtgtcacctcctcc-acattctccatattatggaatggtaacaaaatgccccctttcaagcccacacatggtctcagacaaggtga |
24893878 |
T |
|
| Q |
344 |
tccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
||| | || |||||||||||||| || ||||||||||||||||| |
|
|
| T |
24893877 |
cccgctctctccttatcttttcatactatgcatggaaaagctttc |
24893833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 11297152 - 11296925
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||| || ||| | |||||||| ||||||||||| ||||| || || ||||||| ||||||||| |
|
|
| T |
11297152 |
tattggttcctatcaaagcagttttctgcctggtagtggtacttctgataactcaattgttttgcacgaaatcatccacttcatgataagatctaaaagg |
11297053 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||||||| || || | ||||||||||||||| || || |
|
|
| T |
11297052 |
aagaagggttatgtcgctttcaagcttgacttggagaaagcttttgacaacgtcaattgggattttcttagttctttcctccatgattttggtttccccg |
11296953 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
|||||||||| | ||||||||||||||| |
|
|
| T |
11296952 |
acatcaccattatgctcatcatgcattg |
11296925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 32 - 345
Target Start/End: Original strand, 35233286 - 35233599
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| |||||||||||||| |||||| ||||||||||||| | || ||||| ||||||||| |||||||| |||| ||||||| | || |||| | |
|
|
| T |
35233286 |
tattggcccctatcaaagcagttttctgtctggtaggggcacctctgacaactcaattgttttgaaggaaattgttcacttcatgagaaaatccaaaaag |
35233385 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||| || || ||||||| ||| ||||| | ||||||||||| ||||| ||||||||||| || || || || ||||| ||||| || || || || | |
|
|
| T |
35233386 |
aagaaagggtatgtagctttcaaacttgatctagagaaagcttttgacaatgtcaactgggagtttcttagtaattgccttcatgacttcggtttcccta |
35233485 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||||||||||||| | || ||||| || || ||| ||| || ||||| | ||||| || ||||||||||| |||||||||| | ||||| || |
|
|
| T |
35233486 |
acatcaccatcaagtttattatgcactgtgtttctttatctactttttctattttatggaatggaaacaagttgcctaatttcaagcctacacatggtct |
35233585 |
T |
|
| Q |
332 |
ccgacaaggtgatc |
345 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
35233586 |
ccgacaaggtgatc |
35233599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 32725814 - 32725587
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
|||||| || || |||||||| ||||||||| |||||| ||| || ||||| ||||||||| ||||||| |||| || |||| ||||||| | |
|
|
| T |
32725814 |
tattggcccttaccaaagcagttttctgcctaataggggaacttatgacaactcaattgttttgtaggaaatagttcactttatgagaagatctaaaaag |
32725715 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
|||||||| || ||||||| ||| |||||| ||||||||||||| || || |||| |||||||| || | ||||||| ||| |||||||||||| |
|
|
| T |
32725714 |
aagaagggatatgtagctttcaaacttgacctggagaaagcttttgataatgtcagatgggattttcttaattcttgcctccttgagtttggatttccgg |
32725615 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattg |
259 |
Q |
| |
|
|||||||||||||||| ||||||||||| |
|
|
| T |
32725614 |
acatcaccatcaagcttatcatgcattg |
32725587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 388
Target Start/End: Complemental strand, 24990832 - 24990660
Alignment:
| Q |
216 |
gattttggatttccgaacatcaccatcaagctcatcatgcattgcgt-agcttctcctagttactctatactttggaacgggaacaagttgccgcctttc |
314 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||| || || | || |||| | || ||||| | |||||||| ||||| |||| |||||| |
|
|
| T |
24990832 |
gattttggttttccagacatcaccatcaaactcatcatgcactgtgtcacctcctcc-actttttctattttatggaacggtaacaaaatgccccctttc |
24990734 |
T |
|
| Q |
315 |
aagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
||||| | ||||| ||| |||||||||| ||| | || |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
24990733 |
aagcccacccatggtctcagacaaggtgacccgctctctccttatcttttcattctttgcatggagaagctttc |
24990660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 385
Target Start/End: Complemental strand, 27853059 - 27852952
Alignment:
| Q |
278 |
ctctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatg |
377 |
Q |
| |
|
|||||| ||||||||||| ||||| |||| ||||||||||||||||||| || ||||||| || || || || ||||| | ||||||||||| ||| |
|
|
| T |
27853059 |
ctctattctttggaacggaaacaaaatgccttctttcaagccttctcatggtctaagacaaggggaccctttatctccttacttattcatcctttgtatg |
27852960 |
T |
|
| Q |
378 |
gaaaagct |
385 |
Q |
| |
|
|||||||| |
|
|
| T |
27852959 |
gaaaagct |
27852952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 13599639 - 13599745
Alignment:
| Q |
288 |
tggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagcttt |
387 |
Q |
| |
|
||||| || |||||||| |||| ||||||||| |||||| ||||| ||||||||||| | || |||||||| |||||| | || |||||||| |||| |
|
|
| T |
13599639 |
tggaatggtaacaagtttccgcaattcaagcctactcatgatctccgtcaaggtgatcctctttcaccttatctcttcatcttgtgtatggaaaaacttt |
13599738 |
T |
|
| Q |
388 |
cagctgc |
394 |
Q |
| |
|
||||||| |
|
|
| T |
13599739 |
cagctgc |
13599745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 262
Target Start/End: Complemental strand, 23208206 - 23207989
Alignment:
| Q |
45 |
caaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaagaagggttacg |
144 |
Q |
| |
|
|||||||| |||||||| |||||||| ||| | || ||||| ||||||||||||||||||||||| || |||| | | || || |||||||| ||||| | |
|
|
| T |
23208206 |
caaagcagttttctgccaggtaggggaacttctgacaactcaattgttttgcaggaaattattcactttatgaggaagtcaaagaggaagaaaggttatg |
23208107 |
T |
|
| Q |
145 |
tagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacatcaccatcaa |
244 |
Q |
| |
|
| |||| |||||| |||||||||||||||||||| || |||| ||||||||||| | |||||||| |||||||| ||||| | || |||||||| |
|
|
| T |
23208106 |
ttgctttcaagctagacttggagaaagctttcgataatgtcagatgggatttccttaattcttgcctccaggattttggttttccagatattaccatcaa |
23208007 |
T |
|
| Q |
245 |
gctcatcatgcattgcgt |
262 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
23208006 |
actcatcatgcattgcgt |
23207989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 36 - 387
Target Start/End: Complemental strand, 27781979 - 27781628
Alignment:
| Q |
36 |
ggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaaggaaga |
135 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||| || || ||||||||||||||| |||||||| | || || ||| | ||||| | ||||| |
|
|
| T |
27781979 |
ggtccctatcaaagcagcttcctgccaggtaggggcacggctgacaactctattgttttgtaggaaattgtacactttatgcggagatctaagaagaaga |
27781880 |
T |
|
| Q |
136 |
agggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccgaacat |
235 |
Q |
| |
|
| |||| ||||||| ||| |||||| | ||||||||||| || || ||||| ||||||||| |||| ||||| ||||| ||||| || || | || |
|
|
| T |
27781879 |
aaggttgtgtagctttcaaacttgacctagagaaagcttttgataatgtcaattgggatttcttaagtgcttgccttcatgactttggtttcccagatat |
27781780 |
T |
|
| Q |
236 |
caccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccga |
335 |
Q |
| |
|
||||| |||||||||||||| || || | || | | || ||| || || |||||||||||||| |||| || || ||||| ||||||||||| || |
|
|
| T |
27781779 |
taccataaagctcatcatgcactgtgtcacctcatccactttctccattctatggaacgggaacaaaatgcctccatttaagccaactcatggcctcaga |
27781680 |
T |
|
| Q |
336 |
caaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagcttt |
387 |
Q |
| |
|
|||||||| || | || ||||| || |||||||| |||||||| ||||||| |
|
|
| T |
27781679 |
caaggtgaccctctttcaccttacctcttcatcctctgcatggagaagcttt |
27781628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 391
Target Start/End: Complemental strand, 16770314 - 16769956
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||||||||||||||| | || ||||| |||||||||||||||||| |||||||| ||| | |||| |
|
|
| T |
16770314 |
tattggtccttatcagagcagttttctgcctggtaggggcactactgacaactcaattgttttgcaggaaatttttcatttcttgagaagataaaaaaaa |
16770215 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||| ||||| || |||| ||||||||| | || |||||||| || || |||||||| ||||| || || || || |||||||||||||| || |
|
|
| T |
16770214 |
aagaa-ggttatgtggcttttaagcttgaccttgaaaaagcttttgataatgtcaactgagattttcttcataattgtctgcatgattttggattcccag |
16770116 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
|||| |||||||| || || ||||| || || ||||| | | || |||||| | ||||| || ||||| ||||||| |||||| ||| ||||||| || |
|
|
| T |
16770115 |
acattaccatcaaacttattatgcactgtgtttcttcttccactttctctattttatggaatggtaacaaattgccgcatttcaaacctactcatggtct |
16770016 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttcagc |
391 |
Q |
| |
|
|||||||||||||| | || |||||||| |||||| | || |||||||| || ||||| |
|
|
| T |
16770015 |
tcgacaaggtgatcctctttcaccttatctcttcatcttgtgtatggaaaaactctcagc |
16769956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 1579512 - 1579428
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatg |
116 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| || | || ||||| ||||||||| ||||||| | ||| |||||| |
|
|
| T |
1579512 |
tattggtccctatcaaagcagttttctgcctagtaggggcgctactgacaactcaattgttttgaaggaaataactcacttcatg |
1579428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 1353864 - 1353794
Alignment:
| Q |
312 |
ttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaa |
382 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||| | || || ||||||||||| ||||| |||||||| |
|
|
| T |
1353864 |
ttcaagcctactcatggcctcatacaaggtgatccactctcaccatatcttttcattctttgtatggaaaa |
1353794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 385
Target Start/End: Complemental strand, 1579304 - 1579159
Alignment:
| Q |
240 |
atcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaag |
339 |
Q |
| |
|
||||| |||||||||||||| || ||||| | | || |||||| || | ||| | ||||||||||| || || | ||| ||||||| ||| |||| | |
|
|
| T |
1579304 |
atcaatctcatcatgcattgtgtttcttcttcaactttctctattctctagaatagaaacaagttgcctccctttcatcctactcatgggctcagacagg |
1579205 |
T |
|
| Q |
340 |
gtgatccgttgtccccttatcttttcatcctttgcatggaaaagct |
385 |
Q |
| |
|
|||||||| | |||||||| || || || ||||||||||||||||| |
|
|
| T |
1579204 |
gtgatccgctctccccttacctctttattctttgcatggaaaagct |
1579159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0214
Description:
Target: scaffold0214; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 388
Target Start/End: Original strand, 8764 - 9120
Alignment:
| Q |
32 |
tattggtccctatcaaagcagctttctgcctggtaggggcactgcagataactctattgttttgcaggaaattattcatttcatgaagcactctaaaagg |
131 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||||||||| | || || | ||||||||||||||||||||||| | |||| || || | | |
|
|
| T |
8764 |
tattggtccttaccaaagcagtttcctgcctggtaggggcaccactgacaatgccattgttttgcaggaaattattcactacatgcgaagatccaagaag |
8863 |
T |
|
| Q |
132 |
aagaagggttacgtagcttacaagcttgacttggagaaagctttcgacaacgtcaactgggatttcctaagcaactgcctccatgattttggatttccga |
231 |
Q |
| |
|
||||| || ||||| |||| ||| | || || ||||||||||| || || || ||||||||||| || | ||||| ||||||||| || ||| |
|
|
| T |
8864 |
aagaaaggatacgtggcttttaagatcgatttagagaaagcttttgataatgttaactgggattttctccgatcttgcctttgtgattttggcttcccgg |
8963 |
T |
|
| Q |
232 |
acatcaccatcaagctcatcatgcattgcgtagcttctcctagttactctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcct |
331 |
Q |
| |
|
| | ||||||||||||||||||||||||||| | || | || | |||||| |||||||| || || | | |||| |||||| |||||||||||||||| |
|
|
| T |
8964 |
ataccaccatcaagctcatcatgcattgcgttacctcatccagattctctattctttggaatggtaataggctgcctcctttcgagccttctcatggcct |
9063 |
T |
|
| Q |
332 |
ccgacaaggtgatccgttgtccccttatcttttcatcctttgcatggaaaagctttc |
388 |
Q |
| |
|
| || |||||||| | ||||| || ||||| || ||||||||||| || ||||| |
|
|
| T |
9064 |
cacgcagggtgatccactttccccgtacctttttatactttgcatggagaaactttc |
9120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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