View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10730_7 (Length: 389)
Name: NF10730_7
Description: NF10730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10730_7 |
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Alignment Details
Target: chr1 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 11 - 366
Target Start/End: Original strand, 51010183 - 51010538
Alignment:
| Q |
11 |
gatgaaccactcaattggcttcaattcaatgagcaacatgcaatcaaatgtaggagatgaaaatgataacacaaacaatattttccatccatcagagaca |
110 |
Q |
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| T |
51010183 |
gatgaaccactcaattggcttcaattcaatgagcaacatgcaatcaaatgtaggagatgaaaatgataacacaaacaatattttccatccatcagagaca |
51010282 |
T |
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| Q |
111 |
ttgaatcttccacatgacatctctgtattgaacttcatgcaacagttcaattacagttacaatcaacaacaaaaccgaatcaagaacgatggaaccttct |
210 |
Q |
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| T |
51010283 |
ttgaatcttccacatgacatctctgtattgaacttcatgcaacagttcaattacagttacaatcaacaacaaaaccgaatcaagaacgatggaaccttct |
51010382 |
T |
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| Q |
211 |
ctgaagaataccaaggtccattccttcatgatcatgaaaacaacaacactctcaaatccaacacagaagaggaacatgataacaaaagcttgatgacaga |
310 |
Q |
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| T |
51010383 |
ctgaagaatacctaggtccattccttcatgatcacgaaaacaacaacactctcaaatccaacacagaagaggaacatgatagcaaaagcttgatgacaga |
51010482 |
T |
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| Q |
311 |
aaataatcaatatatgtttgtggatcctttagacacaaaaaagaagcaagaaaatg |
366 |
Q |
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| T |
51010483 |
aaataatcaatatgtgtttgtggatcctttagacacaaaaaagaagcaagaaaatg |
51010538 |
T |
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